Some updates to the loinc mapper

hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/loinc/LoincPartLinkHandler.java

@@ -36,6 +36,7 @@ public class LoincPartLinkHandler implements IRecordHandler {
 	private static final Logger ourLog = LoggerFactory.getLogger(LoincPartLinkHandler.class);
 	private final Map<String, TermConcept> myCode2Concept;
 	private final TermCodeSystemVersion myCodeSystemVersion;
+	private Long myPartCount;
 
 	public LoincPartLinkHandler(TermCodeSystemVersion theCodeSystemVersion, Map<String, TermConcept> theCode2concept) {
 		myCodeSystemVersion = theCodeSystemVersion;
@@ -57,7 +58,14 @@ public class LoincPartLinkHandler implements IRecordHandler {
 			return;
 		}
 		if (partConcept == null) {
-			ourLog.warn("No part code: {}", partNumber);
+			if (myPartCount == null) {
+				myPartCount = myCode2Concept
+					.keySet()
+					.stream()
+					.filter(t->t.startsWith("LP"))
+					.count();
+			}
+			ourLog.debug("No part code: {} - Have {} part codes", partNumber, myPartCount);
 			return;
 		}
 

hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/loinc/LoincPartRelatedCodeMappingHandler.java

@@ -81,7 +81,7 @@ public class LoincPartRelatedCodeMappingHandler extends BaseHandler implements I
 				equivalence = Enumerations.ConceptMapEquivalence.WIDER;
 				break;
 			default:
-				throw new InternalErrorException("Unknown MapType: " + mapType);
+				throw new InternalErrorException("Unknown MapType '" + mapType + "' for PartNumber: " + partNumber);
 		}
 
 		addConceptMapEntry(

pom.xml

@@ -451,7 +451,7 @@
 		<jetty_version>9.4.8.v20171121</jetty_version>
 		<jsr305_version>3.0.2</jsr305_version>
 		<!--<hibernate_version>5.2.10.Final</hibernate_version>-->
-		<hibernate_version>5.2.12.Final</hibernate_version>
+		<hibernate_version>5.2.16.Final</hibernate_version>
 		<hibernate_validator_version>5.4.1.Final</hibernate_validator_version>
 		<!-- Update lucene version when you update hibernate-search version -->
 		<hibernate_search_version>5.7.1.Final</hibernate_search_version>

src/changes/changes.xml

@@ -12,6 +12,7 @@
 				latest versions (dependent HAPI modules listed in brackets):
 				<![CDATA[
 					<ul>
+						<li>Hibernate (JPA): 5.2.12.Final -&gt; 5.2.16.Final</li>
 						<li>Javassist (JPA): 3.20.0-GA -&gt; 3.22.0-GA</li>
 					</ul>
 				]]>