Merge branch 'master' of github.com:jamesagnew/hapi-fhir
This commit is contained in:
commit
dd7deae1c1
|
@ -605,4 +605,29 @@ public abstract class ResourceMetadataKeyEnum<T> implements Serializable {
|
|||
|
||||
}
|
||||
|
||||
public static final class ExtensionResourceMetadataKey extends ResourceMetadataKeyEnum<ExtensionDt> {
|
||||
public ExtensionResourceMetadataKey(String url) {
|
||||
super(url);
|
||||
}
|
||||
|
||||
@Override
|
||||
public ExtensionDt get(IResource theResource) {
|
||||
Object retValObj = theResource.getResourceMetadata().get(this);
|
||||
if (retValObj == null) {
|
||||
return null;
|
||||
} else if (retValObj instanceof ExtensionDt) {
|
||||
return (ExtensionDt) retValObj;
|
||||
}
|
||||
throw new InternalErrorException("Found an object of type '" + retValObj.getClass().getCanonicalName()
|
||||
+ "' in resource metadata for key " + this.name() + " - Expected "
|
||||
+ ExtensionDt.class.getCanonicalName());
|
||||
}
|
||||
|
||||
@Override
|
||||
public void put(IResource theResource, ExtensionDt theObject) {
|
||||
theResource.getResourceMetadata().put(this, theObject);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
}
|
||||
|
|
|
@ -918,6 +918,18 @@ public abstract class BaseParser implements IParser {
|
|||
throw new DataFormatException(nextChild + " has no child of type " + theType);
|
||||
}
|
||||
|
||||
protected List<Map.Entry<ResourceMetadataKeyEnum<?>, Object>> getExtensionMetadataKeys(IResource resource) {
|
||||
List<Map.Entry<ResourceMetadataKeyEnum<?>, Object>> extensionMetadataKeys = new ArrayList<Map.Entry<ResourceMetadataKeyEnum<?>, Object>>();
|
||||
for (Map.Entry<ResourceMetadataKeyEnum<?>, Object> entry : resource.getResourceMetadata().entrySet()) {
|
||||
if (entry.getKey() instanceof ResourceMetadataKeyEnum.ExtensionResourceMetadataKey) {
|
||||
extensionMetadataKeys.add(entry);
|
||||
}
|
||||
}
|
||||
|
||||
return extensionMetadataKeys;
|
||||
}
|
||||
|
||||
|
||||
protected static <T> List<T> extractMetadataListNotNull(IResource resource, ResourceMetadataKeyEnum<List<T>> key) {
|
||||
List<? extends T> securityLabels = key.get(resource);
|
||||
if (securityLabels == null) {
|
||||
|
|
|
@ -45,10 +45,7 @@ import java.io.IOException;
|
|||
import java.io.Reader;
|
||||
import java.io.Writer;
|
||||
import java.math.BigDecimal;
|
||||
import java.util.ArrayList;
|
||||
import java.util.Collections;
|
||||
import java.util.List;
|
||||
import java.util.Set;
|
||||
import java.util.*;
|
||||
|
||||
import static ca.uhn.fhir.context.BaseRuntimeElementDefinition.ChildTypeEnum.ID_DATATYPE;
|
||||
import static ca.uhn.fhir.context.BaseRuntimeElementDefinition.ChildTypeEnum.PRIMITIVE_DATATYPE;
|
||||
|
@ -654,8 +651,9 @@ public class JsonParser extends BaseParser implements IJsonLikeParser {
|
|||
if (isBlank(versionIdPart)) {
|
||||
versionIdPart = ResourceMetadataKeyEnum.VERSION.get(resource);
|
||||
}
|
||||
List<Map.Entry<ResourceMetadataKeyEnum<?>, Object>> extensionMetadataKeys = getExtensionMetadataKeys(resource);
|
||||
|
||||
if (super.shouldEncodeResourceMeta(resource) && ElementUtil.isEmpty(versionIdPart, updated, securityLabels, tags, profiles) == false) {
|
||||
if (super.shouldEncodeResourceMeta(resource) && (ElementUtil.isEmpty(versionIdPart, updated, securityLabels, tags, profiles) == false) || !extensionMetadataKeys.isEmpty()) {
|
||||
beginObject(theEventWriter, "meta");
|
||||
writeOptionalTagWithTextNode(theEventWriter, "versionId", versionIdPart);
|
||||
writeOptionalTagWithTextNode(theEventWriter, "lastUpdated", updated);
|
||||
|
@ -695,6 +693,8 @@ public class JsonParser extends BaseParser implements IJsonLikeParser {
|
|||
theEventWriter.endArray();
|
||||
}
|
||||
|
||||
addExtensionMetadata(theResDef, theResource, theContainedResource, theSubResource, extensionMetadataKeys, resDef, theEventWriter);
|
||||
|
||||
theEventWriter.endObject(); // end meta
|
||||
}
|
||||
}
|
||||
|
@ -704,6 +704,23 @@ public class JsonParser extends BaseParser implements IJsonLikeParser {
|
|||
theEventWriter.endObject();
|
||||
}
|
||||
|
||||
|
||||
private void addExtensionMetadata(RuntimeResourceDefinition theResDef, IBaseResource theResource,
|
||||
boolean theContainedResource, boolean theSubResource,
|
||||
List<Map.Entry<ResourceMetadataKeyEnum<?>, Object>> extensionMetadataKeys,
|
||||
RuntimeResourceDefinition resDef,
|
||||
JsonLikeWriter theEventWriter) throws IOException {
|
||||
if (extensionMetadataKeys.isEmpty()) {
|
||||
return;
|
||||
}
|
||||
|
||||
ExtensionDt metaResource = new ExtensionDt();
|
||||
for (Map.Entry<ResourceMetadataKeyEnum<?>, Object> entry : extensionMetadataKeys) {
|
||||
metaResource.addUndeclaredExtension((ExtensionDt) entry.getValue());
|
||||
}
|
||||
encodeCompositeElementToStreamWriter(theResDef, theResource, metaResource, theEventWriter, theContainedResource, theSubResource, new CompositeChildElement(resDef, theSubResource));
|
||||
}
|
||||
|
||||
/**
|
||||
* This is useful only for the two cases where extensions are encoded as direct children (e.g. not in some object
|
||||
* called _name): resource extensions, and extension extensions
|
||||
|
|
|
@ -841,6 +841,25 @@ class ParserState<T> {
|
|||
}
|
||||
}
|
||||
|
||||
@Override
|
||||
public void enteringNewElementExtension(StartElement theElem, String theUrlAttr, boolean theIsModifier, final String baseServerUrl) {
|
||||
ResourceMetadataKeyEnum.ExtensionResourceMetadataKey resourceMetadataKeyEnum = new ResourceMetadataKeyEnum.ExtensionResourceMetadataKey(theUrlAttr);
|
||||
Object metadataValue = myMap.get(resourceMetadataKeyEnum);
|
||||
ExtensionDt newExtension;
|
||||
if (metadataValue == null) {
|
||||
newExtension = new ExtensionDt(theIsModifier);
|
||||
} else if (metadataValue instanceof ExtensionDt) {
|
||||
newExtension = (ExtensionDt) metadataValue;
|
||||
} else {
|
||||
throw new IllegalStateException("Expected ExtensionDt as custom resource metadata type, got: " + metadataValue.getClass().getSimpleName());
|
||||
}
|
||||
newExtension.setUrl(theUrlAttr);
|
||||
myMap.put(resourceMetadataKeyEnum, newExtension);
|
||||
|
||||
ExtensionState newState = new ExtensionState(getPreResourceState(), newExtension);
|
||||
push(newState);
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
private class MetaVersionElementState extends BaseState {
|
||||
|
|
|
@ -104,24 +104,33 @@ public class ReferenceParam extends BaseParam /*implements IQueryParameterType*/
|
|||
void doSetValueAsQueryToken(FhirContext theContext, String theParamName, String theQualifier, String theValue) {
|
||||
String q = theQualifier;
|
||||
String resourceType = null;
|
||||
boolean skipSetValue = false;
|
||||
if (isNotBlank(q)) {
|
||||
if (q.startsWith(":")) {
|
||||
int nextIdx = q.indexOf('.');
|
||||
if (nextIdx != -1) {
|
||||
resourceType = q.substring(1, nextIdx);
|
||||
myChain = q.substring(nextIdx + 1);
|
||||
// type is explicitly defined so use it
|
||||
myId.setParts(null, resourceType, theValue, null);
|
||||
skipSetValue = true;
|
||||
} else {
|
||||
resourceType = q.substring(1);
|
||||
}
|
||||
} else if (q.startsWith(".")) {
|
||||
myChain = q.substring(1);
|
||||
// type not defined but this is a chain, so treat value as opaque
|
||||
myId.setParts(null, null, theValue, null);
|
||||
skipSetValue = true;
|
||||
}
|
||||
}
|
||||
|
||||
setValue(theValue);
|
||||
if (!skipSetValue) {
|
||||
setValue(theValue);
|
||||
|
||||
if (isNotBlank(resourceType) && isBlank(getResourceType())) {
|
||||
setValue(resourceType + '/' + theValue);
|
||||
if (isNotBlank(resourceType) && isBlank(getResourceType())) {
|
||||
setValue(resourceType + '/' + theValue);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
|
|
@ -1,5 +1,40 @@
|
|||
package ca.uhn.fhir.parser;
|
||||
|
||||
import static org.hamcrest.CoreMatchers.equalTo;
|
||||
import static org.hamcrest.Matchers.contains;
|
||||
import static org.hamcrest.Matchers.containsString;
|
||||
import static org.hamcrest.Matchers.not;
|
||||
import static org.hamcrest.Matchers.stringContainsInOrder;
|
||||
import static org.hamcrest.core.IsInstanceOf.instanceOf;
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertFalse;
|
||||
import static org.junit.Assert.assertNotNull;
|
||||
import static org.junit.Assert.assertNull;
|
||||
import static org.junit.Assert.assertSame;
|
||||
import static org.junit.Assert.assertThat;
|
||||
import static org.junit.Assert.assertTrue;
|
||||
import static org.junit.Assert.fail;
|
||||
import static org.mockito.Mockito.mock;
|
||||
import static org.mockito.Mockito.verify;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.io.StringReader;
|
||||
import java.util.*;
|
||||
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.apache.commons.lang3.time.DateUtils;
|
||||
import org.hamcrest.Matchers;
|
||||
import org.hl7.fhir.instance.model.api.IIdType;
|
||||
import org.junit.AfterClass;
|
||||
import org.junit.Assert;
|
||||
import org.junit.Test;
|
||||
import org.mockito.ArgumentCaptor;
|
||||
import org.mockito.Mockito;
|
||||
import org.mockito.internal.stubbing.answers.ThrowsException;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
||||
import com.google.common.collect.Sets;
|
||||
|
||||
import ca.uhn.fhir.context.FhirContext;
|
||||
import ca.uhn.fhir.model.api.*;
|
||||
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
|
||||
|
@ -1886,6 +1921,113 @@ public class JsonParserDstu2Test {
|
|||
//@formatter:off
|
||||
|
||||
assertEquals("Smith", p.getName().get(0).getGiven().get(0).getValue());
|
||||
assertExtensionMetadata(p, "fhir-request-method", false, StringDt.class, "POST");
|
||||
assertExtensionMetadata(p, "fhir-request-uri", false, UriDt.class, "Patient");
|
||||
assertExtensionMetadata(p, "modified-fhir-request-method", true, StringDt.class, "POST");
|
||||
assertExtensionMetadata(p, "modified-fhir-request-uri", true, UriDt.class, "Patient");
|
||||
}
|
||||
|
||||
private void assertExtensionMetadata(
|
||||
BaseResource resource,
|
||||
String url,
|
||||
boolean isModifier,
|
||||
Class<?> expectedType,
|
||||
String expectedValue) {
|
||||
ExtensionDt extension = (ExtensionDt) resource.getResourceMetadata().get(new ResourceMetadataKeyEnum.ExtensionResourceMetadataKey(url));
|
||||
assertThat(extension.getValue(), instanceOf(expectedType));
|
||||
assertThat(extension.isModifier(), equalTo(isModifier));
|
||||
assertThat(extension.getValueAsPrimitive().getValueAsString(), equalTo(expectedValue));
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testEncodeResourceWithExtensionMetadata() throws Exception {
|
||||
ProcedureRequest procedureRequest = new ProcedureRequest();
|
||||
procedureRequest.setStatus(ProcedureRequestStatusEnum.ACCEPTED);
|
||||
ExtensionDt timestamp = new ExtensionDt(false, "http://fhir.sjanic.com/timestamp");
|
||||
timestamp.addUndeclaredExtension(false, "http://fhir.sjanic.com/timestamp/user", new ResourceReferenceDt("sjanic"));
|
||||
timestamp.addUndeclaredExtension(false, "http://fhir.sjanic.com/timestamp/instance", new InstantDt("2012-01-01T13:00:00Z"));
|
||||
timestamp.addUndeclaredExtension(false, "http://fhir.sjanic.com/timestamp/organization", new ResourceReferenceDt("sjanic_org"));
|
||||
timestamp.addUndeclaredExtension(false, "http://fhir.sjanic.com/timestamp/role", new CodeableConceptDt().addCoding(new CodingDt("sjanic", "Doctor").setDisplay("Doctorin")));
|
||||
ExtensionDt payment = new ExtensionDt(true, "http://fhir.sjanic.com/procedureRequest/requiresPatientPayment", new BooleanDt(true));
|
||||
procedureRequest.getResourceMetadata().put(new ResourceMetadataKeyEnum.ExtensionResourceMetadataKey(timestamp.getUrl()), timestamp);
|
||||
procedureRequest.getResourceMetadata().put(new ResourceMetadataKeyEnum.ExtensionResourceMetadataKey(payment.getUrl()), payment);
|
||||
|
||||
String json = ourCtx.newJsonParser().encodeResourceToString(procedureRequest);
|
||||
|
||||
// @formatter:off
|
||||
assertThat(json, stringContainsInOrder(
|
||||
"\"meta\":{"+
|
||||
"\"extension\":["+
|
||||
"{"+
|
||||
"\"url\":\"http://fhir.sjanic.com/timestamp\","+
|
||||
"\"extension\":["+
|
||||
"{"+
|
||||
"\"url\":\"http://fhir.sjanic.com/timestamp/user\","+
|
||||
"\"valueReference\":{"+
|
||||
"\"reference\":\"sjanic\""+
|
||||
"}"+
|
||||
"},"+
|
||||
"{"+
|
||||
"\"url\":\"http://fhir.sjanic.com/timestamp/instance\","+
|
||||
"\"valueInstant\":\"2012-01-01T13:00:00Z\""+
|
||||
"},"+
|
||||
"{"+
|
||||
"\"url\":\"http://fhir.sjanic.com/timestamp/organization\","+
|
||||
"\"valueReference\":{"+
|
||||
"\"reference\":\"sjanic_org\""+
|
||||
"}"+
|
||||
"},"+
|
||||
"{"+
|
||||
"\"url\":\"http://fhir.sjanic.com/timestamp/role\","+
|
||||
"\"valueCodeableConcept\":{"+
|
||||
"\"coding\":["+
|
||||
"{"+
|
||||
"\"system\":\"sjanic\","+
|
||||
"\"code\":\"Doctor\","+
|
||||
"\"display\":\"Doctorin\""+
|
||||
"}"+
|
||||
"]"+
|
||||
"}"+
|
||||
"}"+
|
||||
"]"+
|
||||
"}"+
|
||||
"],"+
|
||||
"\"modifierExtension\":["+
|
||||
"{"+
|
||||
"\"url\":\"http://fhir.sjanic.com/procedureRequest/requiresPatientPayment\","+
|
||||
"\"valueBoolean\":true"+
|
||||
"}"+
|
||||
"]"+
|
||||
"},"));
|
||||
// @formatter:on
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testParseResourceWithExtensionMetadata() throws Exception {
|
||||
String input = IOUtils.toString(getClass().getResourceAsStream("/procedure-request.json"));
|
||||
IParser parser = ourCtx.newJsonParser();
|
||||
IParserErrorHandler peh = mock(IParserErrorHandler.class);
|
||||
parser.setParserErrorHandler(peh);
|
||||
|
||||
ProcedureRequest p = parser.parseResource(ProcedureRequest.class, input);
|
||||
|
||||
ArgumentCaptor<String> capt = ArgumentCaptor.forClass(String.class);
|
||||
verify(peh, Mockito.never()).unknownElement(Mockito.isNull(IParseLocation.class), capt.capture());
|
||||
assertParsedResourcesExtensionMetadata(p);
|
||||
}
|
||||
|
||||
private void assertParsedResourcesExtensionMetadata(ProcedureRequest resource) throws Exception {
|
||||
ExtensionDt payment = (ExtensionDt) resource.getResourceMetadata().get(
|
||||
new ResourceMetadataKeyEnum.ExtensionResourceMetadataKey("http://fhir.sjanic.com/procedureRequest/requiresPatientPayment"));
|
||||
assertThat(payment.isModifier(), equalTo(true));
|
||||
assertThat(((BooleanDt)payment.getValue()).getValue(), equalTo(true));
|
||||
|
||||
TimestampFields timestampFields = new TimestampFields(resource);
|
||||
assertThat(timestampFields.user.getReference().getIdPart(), equalTo("sjanic"));
|
||||
assertThat(timestampFields.instance.getValue(), equalTo(new InstantDt("2012-01-01T13:00:00Z").getValue()));
|
||||
assertThat(timestampFields.organization.getReference().getIdPart(), equalTo("sjanic_org"));
|
||||
assertThat(timestampFields.role.getCodingFirstRep().getSystem(), equalTo("sjanic"));
|
||||
assertThat(timestampFields.role.getCodingFirstRep().getCode(), equalTo("Doctor"));
|
||||
}
|
||||
|
||||
@Test
|
||||
|
@ -1989,4 +2131,189 @@ public class JsonParserDstu2Test {
|
|||
public static void afterClassClearContext() {
|
||||
TestUtil.clearAllStaticFieldsForUnitTest();
|
||||
}
|
||||
|
||||
/**
|
||||
* See #537
|
||||
*/
|
||||
@Test
|
||||
public void testEncodeNestedContained() {
|
||||
|
||||
Organization org04 = new Organization();
|
||||
org04.setName("LEVEL04");
|
||||
|
||||
Organization org03 = new Organization();
|
||||
org03.setName("LEVEL03");
|
||||
org03.getPartOf().setResource(org04);
|
||||
|
||||
Organization org02 = new Organization();
|
||||
org02.setName("LEVEL02");
|
||||
org02.getPartOf().setResource(org03);
|
||||
|
||||
Organization org01 = new Organization();
|
||||
org01.setName("LEVEL01");
|
||||
org01.getPartOf().setResource(org02);
|
||||
|
||||
String encoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(org01);
|
||||
ourLog.info(encoded);
|
||||
|
||||
assertThat(encoded, stringContainsInOrder("LEVEL02","LEVEL03","LEVEL04","LEVEL01" ));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* See #505
|
||||
*/
|
||||
@Test
|
||||
public void testIncludeResourceWhenEncoding() {
|
||||
Condition condition = new Condition();
|
||||
condition.setDateRecorded(new DateDt("2011-01-01"));
|
||||
|
||||
Goal goal = new Goal();
|
||||
goal.setId("Goal1");
|
||||
ResourceReferenceDt resourceReferenceDt = new ResourceReferenceDt(condition);
|
||||
goal.setAddresses(Collections.singletonList(resourceReferenceDt));
|
||||
|
||||
ca.uhn.fhir.model.dstu2.resource.Bundle bundle = new ca.uhn.fhir.model.dstu2.resource.Bundle();
|
||||
Entry entry = bundle.addEntry();
|
||||
entry.setResource(goal);
|
||||
|
||||
IParser parser = ourCtx.newJsonParser();
|
||||
|
||||
String resourceToString = parser.setPrettyPrint(true).encodeResourceToString(bundle);
|
||||
ourLog.info(resourceToString);
|
||||
|
||||
assertThat(resourceToString, containsString("2011-01-01"));
|
||||
|
||||
bundle = parser.parseResource(ca.uhn.fhir.model.dstu2.resource.Bundle.class, resourceToString);
|
||||
assertEquals(1, bundle.getEntry().size());
|
||||
goal = (Goal) bundle.getEntry().get(0).getResource();
|
||||
|
||||
condition = (Condition) goal.getAddresses().get(0).getResource();
|
||||
|
||||
assertEquals("2011-01-01", condition.getDateRecordedElement().getValueAsString());
|
||||
}
|
||||
|
||||
/**
|
||||
* Test for the url generated based on the server config
|
||||
*/
|
||||
@Test
|
||||
public void testGeneratedUrls() {
|
||||
final IParser jsonParser = ourCtx.newJsonParser().setPrettyPrint(true);
|
||||
jsonParser.setServerBaseUrl("http://myserver.com");
|
||||
|
||||
final CustomPatientDstu2 patient = new CustomPatientDstu2();
|
||||
patient.setHomeless(new BooleanDt(true));
|
||||
|
||||
final String parsedPatient = jsonParser.encodeResourceToString(patient);
|
||||
|
||||
assertTrue(parsedPatient.contains("http://myserver.com/StructureDefinition/Patient"));
|
||||
assertTrue(parsedPatient.contains("http://myserver.com/StructureDefinition/homeless"));
|
||||
}
|
||||
|
||||
/**
|
||||
* Test for the url generated based on the server config
|
||||
*/
|
||||
@Test
|
||||
public void testCustomUrlExtension() {
|
||||
final String expected = "{\"resourceType\":\"Patient\",\"extension\":[{\"url\":\"http://www.example.com/petname\",\"valueString\":\"myName\"}]}";
|
||||
|
||||
final MyPatientWithCustomUrlExtension patient = new MyPatientWithCustomUrlExtension();
|
||||
patient.setPetName(new StringDt("myName"));
|
||||
|
||||
final IParser jsonParser = ourCtx.newJsonParser();
|
||||
jsonParser.setServerBaseUrl("http://www.example.com");
|
||||
|
||||
final String parsedPatient = jsonParser.encodeResourceToString(patient);
|
||||
System.out.println(parsedPatient);
|
||||
assertEquals(expected, parsedPatient);
|
||||
|
||||
// Parse with string
|
||||
MyPatientWithCustomUrlExtension newPatient = jsonParser.parseResource(MyPatientWithCustomUrlExtension.class, parsedPatient);
|
||||
assertEquals("myName", newPatient.getPetName().getValue());
|
||||
|
||||
// Parse with stream
|
||||
newPatient = jsonParser.parseResource(MyPatientWithCustomUrlExtension.class, new StringReader(parsedPatient));
|
||||
assertEquals("myName", newPatient.getPetName().getValue());
|
||||
|
||||
//Check no NPE if base server not configure
|
||||
newPatient = ourCtx.newJsonParser().parseResource(MyPatientWithCustomUrlExtension.class, new StringReader(parsedPatient));
|
||||
assertNull("myName", newPatient.getPetName().getValue());
|
||||
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testCustomUrlExtensioninBundle() {
|
||||
final String expected = "{\"resourceType\":\"Bundle\",\"entry\":[{\"resource\":{\"resourceType\":\"Patient\",\"extension\":[{\"url\":\"http://www.example.com/petname\",\"valueString\":\"myName\"}]}}]}";
|
||||
|
||||
final MyPatientWithCustomUrlExtension patient = new MyPatientWithCustomUrlExtension();
|
||||
patient.setPetName(new StringDt("myName"));
|
||||
|
||||
final Bundle bundle = new Bundle();
|
||||
final Entry entry = new Entry();
|
||||
entry.setResource(patient);
|
||||
bundle.addEntry(entry);
|
||||
|
||||
final IParser jsonParser = ourCtx.newJsonParser();
|
||||
jsonParser.setServerBaseUrl("http://www.example.com");
|
||||
|
||||
final String parsedBundle = jsonParser.encodeResourceToString(bundle);
|
||||
System.out.println(parsedBundle);
|
||||
assertEquals(expected, parsedBundle);
|
||||
|
||||
// Parse with string
|
||||
Bundle newBundle = jsonParser.parseResource(Bundle.class, parsedBundle);
|
||||
assertNotNull(newBundle);
|
||||
assertEquals(1, newBundle.getEntry().size());
|
||||
Patient newPatient = (Patient) newBundle.getEntry().get(0).getResource();
|
||||
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
|
||||
|
||||
// Parse with stream
|
||||
newBundle = jsonParser.parseResource(Bundle.class, new StringReader(parsedBundle));
|
||||
assertNotNull(newBundle);
|
||||
assertEquals(1, newBundle.getEntry().size());
|
||||
newPatient = (Patient) newBundle.getEntry().get(0).getResource();
|
||||
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testBaseUrlFooResourceCorrectlySerializedInExtensionValueReference() {
|
||||
String refVal = "http://my.org/FooBar";
|
||||
|
||||
Patient fhirPat = new Patient();
|
||||
fhirPat.addUndeclaredExtension(false, "x1").setValue(new ResourceReferenceDt(refVal));
|
||||
|
||||
IParser parser = ourCtx.newJsonParser();
|
||||
|
||||
String output = parser.encodeResourceToString(fhirPat);
|
||||
System.out.println("output: " + output);
|
||||
|
||||
// Deserialize then check that valueReference value is still correct
|
||||
fhirPat = parser.parseResource(Patient.class, output);
|
||||
|
||||
List<ExtensionDt> extlst = fhirPat.getUndeclaredExtensionsByUrl("x1");
|
||||
Assert.assertEquals(1, extlst.size());
|
||||
Assert.assertEquals(refVal, ((ResourceReferenceDt) extlst.get(0).getValue()).getReference().getValue());
|
||||
}
|
||||
|
||||
private static final class TimestampFields {
|
||||
ResourceReferenceDt user;
|
||||
InstantDt instance;
|
||||
ResourceReferenceDt organization;
|
||||
CodeableConceptDt role;
|
||||
|
||||
TimestampFields(BaseResource resource) {
|
||||
ExtensionDt timestamp = (ExtensionDt) resource.getResourceMetadata().get(
|
||||
new ResourceMetadataKeyEnum.ExtensionResourceMetadataKey("http://fhir.sjanic.com/timestamp"));
|
||||
|
||||
Map<String, ExtensionDt> timestampFields = new HashMap<>(timestamp.getExtension().size());
|
||||
for (ExtensionDt extensionDt : timestamp.getExtension()) {
|
||||
timestampFields.put(extensionDt.getUrl(), extensionDt);
|
||||
}
|
||||
user = ((ResourceReferenceDt)timestampFields.get("http://fhir.sjanic.com/timestamp/user").getValue());
|
||||
instance = (InstantDt) timestampFields.get("http://fhir.sjanic.com/timestamp/instance").getValue();
|
||||
organization = (ResourceReferenceDt) timestampFields.get("http://fhir.sjanic.com/timestamp/organization").getValue();
|
||||
role = (CodeableConceptDt) timestampFields.get("http://fhir.sjanic.com/timestamp/role").getValue();
|
||||
}
|
||||
}
|
||||
}
|
||||
|
|
|
@ -1,35 +1,35 @@
|
|||
{
|
||||
"id": "73b551fb-46f5-4fb8-b735-2399344e9717",
|
||||
"meta": {
|
||||
"extension": [
|
||||
{
|
||||
"url": "fhir-request-method",
|
||||
"valueString": "POST"
|
||||
},
|
||||
{
|
||||
"url": "fhir-request-uri",
|
||||
"valueUri": "Patient"
|
||||
}
|
||||
],
|
||||
"modifierExtension": [
|
||||
{
|
||||
"url": "fhir-request-method",
|
||||
"valueString": "POST"
|
||||
},
|
||||
{
|
||||
"url": "fhir-request-uri",
|
||||
"valueUri": "Patient"
|
||||
}
|
||||
],
|
||||
"versionId": "01e5253d-d258-494c-8d8e-f22ad6d8f19b",
|
||||
"lastUpdated": "2016-02-20T11:01:56.155Z"
|
||||
},
|
||||
"name": [
|
||||
{
|
||||
"given": [
|
||||
"Smith"
|
||||
]
|
||||
}
|
||||
],
|
||||
"resourceType": "Patient"
|
||||
}
|
||||
{
|
||||
"id": "73b551fb-46f5-4fb8-b735-2399344e9717",
|
||||
"meta": {
|
||||
"extension": [
|
||||
{
|
||||
"url": "fhir-request-method",
|
||||
"valueString": "POST"
|
||||
},
|
||||
{
|
||||
"url": "fhir-request-uri",
|
||||
"valueUri": "Patient"
|
||||
}
|
||||
],
|
||||
"modifierExtension": [
|
||||
{
|
||||
"url": "modified-fhir-request-method",
|
||||
"valueString": "POST"
|
||||
},
|
||||
{
|
||||
"url": "modified-fhir-request-uri",
|
||||
"valueUri": "Patient"
|
||||
}
|
||||
],
|
||||
"versionId": "01e5253d-d258-494c-8d8e-f22ad6d8f19b",
|
||||
"lastUpdated": "2016-02-20T11:01:56.155Z"
|
||||
},
|
||||
"name": [
|
||||
{
|
||||
"given": [
|
||||
"Smith"
|
||||
]
|
||||
}
|
||||
],
|
||||
"resourceType": "Patient"
|
||||
}
|
||||
|
|
|
@ -0,0 +1,47 @@
|
|||
{
|
||||
"resourceType": "ProcedureRequest",
|
||||
"meta": {
|
||||
"extension": [
|
||||
{
|
||||
"url": "http://fhir.sjanic.com/timestamp",
|
||||
"extension": [
|
||||
{
|
||||
"url": "http://fhir.sjanic.com/timestamp/user",
|
||||
"valueReference": {
|
||||
"reference": "sjanic"
|
||||
}
|
||||
},
|
||||
{
|
||||
"url": "http://fhir.sjanic.com/timestamp/instance",
|
||||
"valueInstant": "2012-01-01T13:00:00Z"
|
||||
},
|
||||
{
|
||||
"url": "http://fhir.sjanic.com/timestamp/organization",
|
||||
"valueReference": {
|
||||
"reference": "sjanic_org"
|
||||
}
|
||||
},
|
||||
{
|
||||
"url": "http://fhir.sjanic.com/timestamp/role",
|
||||
"valueCodeableConcept": {
|
||||
"coding": [
|
||||
{
|
||||
"system": "sjanic",
|
||||
"code": "Doctor",
|
||||
"display": "Doctorin"
|
||||
}
|
||||
]
|
||||
}
|
||||
}
|
||||
]
|
||||
}
|
||||
],
|
||||
"modifierExtension": [
|
||||
{
|
||||
"url": "http://fhir.sjanic.com/procedureRequest/requiresPatientPayment",
|
||||
"valueBoolean": true
|
||||
}
|
||||
]
|
||||
},
|
||||
"status": "accepted"
|
||||
}
|
|
@ -19,9 +19,61 @@ public class ReferenceParamTest {
|
|||
rp.setValueAsQueryToken(ourCtx, null, null, "Location/123");
|
||||
assertEquals("Location", rp.getResourceType());
|
||||
assertEquals("123", rp.getIdPart());
|
||||
assertEquals("Location/123", rp.getValue());
|
||||
assertEquals(null, rp.getQueryParameterQualifier());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithResourceType_AbsoluteUrl() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, null, "http://a.b/c/d/e");
|
||||
assertEquals("d", rp.getResourceType());
|
||||
assertEquals("e", rp.getIdPart());
|
||||
assertEquals("http://a.b/c/d/e", rp.getValue());
|
||||
assertEquals(null, rp.getQueryParameterQualifier());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithNoResourceTypeAsQualifierAndChain() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ".name", "FOO");
|
||||
assertEquals(null, rp.getResourceType());
|
||||
assertEquals("FOO", rp.getIdPart());
|
||||
assertEquals("FOO", rp.getValue());
|
||||
assertEquals(".name", rp.getQueryParameterQualifier());
|
||||
assertEquals("name", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithNoResourceTypeAsQualifierAndChain_RelativeUrl() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ".name", "Patient/1233");
|
||||
assertEquals(null, rp.getResourceType());
|
||||
assertEquals("Patient/1233", rp.getIdPart());
|
||||
assertEquals("Patient/1233", rp.getValue());
|
||||
assertEquals(".name", rp.getQueryParameterQualifier());
|
||||
assertEquals("name", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithNoResourceTypeAsQualifierAndChain_AbsoluteUrl() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ".name", "http://something.strange/a/b/c");
|
||||
assertEquals(null, rp.getResourceType());
|
||||
assertEquals("http://something.strange/a/b/c", rp.getIdPart());
|
||||
assertEquals("http://something.strange/a/b/c", rp.getValue());
|
||||
assertEquals(".name", rp.getQueryParameterQualifier());
|
||||
assertEquals("name", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithResourceTypeAsQualifier() {
|
||||
|
@ -30,6 +82,34 @@ public class ReferenceParamTest {
|
|||
rp.setValueAsQueryToken(ourCtx, null, ":Location", "123");
|
||||
assertEquals("Location", rp.getResourceType());
|
||||
assertEquals("123", rp.getIdPart());
|
||||
assertEquals("Location/123", rp.getValue());
|
||||
assertEquals(null, rp.getQueryParameterQualifier());
|
||||
|
||||
}
|
||||
|
||||
// TODO: verify this behavior is correct. If type is explicitly specified (i.e. :Location), should it be
|
||||
// an error if it gets overriden by the resourceType in the url?
|
||||
@Test
|
||||
public void testWithResourceTypeAsQualifier_RelativeUrl() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ":Location", "Patient/123");
|
||||
assertEquals("Patient", rp.getResourceType());
|
||||
assertEquals("123", rp.getIdPart());
|
||||
assertEquals("Patient/123", rp.getValue());
|
||||
assertEquals(null, rp.getQueryParameterQualifier());
|
||||
|
||||
}
|
||||
|
||||
// TODO: verify this behavior is correct. Same case as testWithResourceTypeAsQualifier_RelativeUrl()
|
||||
@Test
|
||||
public void testWithResourceTypeAsQualifier_AbsoluteUrl() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ":Location", "http://a.b/c/d/e");
|
||||
assertEquals("d", rp.getResourceType());
|
||||
assertEquals("e", rp.getIdPart());
|
||||
assertEquals("http://a.b/c/d/e", rp.getValue());
|
||||
assertEquals(null, rp.getQueryParameterQualifier());
|
||||
|
||||
}
|
||||
|
@ -42,11 +122,51 @@ public class ReferenceParamTest {
|
|||
rp.setValueAsQueryToken(ourCtx, null, ":Location.name", "FOO");
|
||||
assertEquals("Location", rp.getResourceType());
|
||||
assertEquals("FOO", rp.getIdPart());
|
||||
assertEquals("Location/FOO", rp.getValue());
|
||||
assertEquals(":Location.name", rp.getQueryParameterQualifier());
|
||||
assertEquals("name", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithResourceTypeAsQualifierAndChain_IdentifierUrlAndValue() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ":Patient.identifier", "http://hey.there/a/b|123");
|
||||
assertEquals("Patient", rp.getResourceType());
|
||||
assertEquals("http://hey.there/a/b|123", rp.getIdPart());
|
||||
assertEquals("Patient/http://hey.there/a/b|123", rp.getValue());
|
||||
assertEquals(":Patient.identifier", rp.getQueryParameterQualifier());
|
||||
assertEquals("identifier", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithResourceTypeAsQualifierAndChain_IdentifierUrlOnly() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ":Patient.identifier", "http://hey.there/a/b|");
|
||||
assertEquals("Patient", rp.getResourceType());
|
||||
assertEquals("http://hey.there/a/b|", rp.getIdPart());
|
||||
assertEquals("Patient/http://hey.there/a/b|", rp.getValue());
|
||||
assertEquals(":Patient.identifier", rp.getQueryParameterQualifier());
|
||||
assertEquals("identifier", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testWithResourceTypeAsQualifierAndChain_ValueOnlyNoUrl() {
|
||||
|
||||
ReferenceParam rp = new ReferenceParam();
|
||||
rp.setValueAsQueryToken(ourCtx, null, ":Patient.identifier", "|abc");
|
||||
assertEquals("Patient", rp.getResourceType());
|
||||
assertEquals("|abc", rp.getIdPart());
|
||||
assertEquals("Patient/|abc", rp.getValue());
|
||||
assertEquals(":Patient.identifier", rp.getQueryParameterQualifier());
|
||||
assertEquals("identifier", rp.getChain());
|
||||
|
||||
}
|
||||
|
||||
@AfterClass
|
||||
public static void afterClassClearContext() {
|
||||
TestUtil.clearAllStaticFieldsForUnitTest();
|
||||
|
|
Loading…
Reference in New Issue