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More cleanup of legacy code

This commit is contained in:
James Agnew 2017-07-30 17:10:01 -04:00
parent 9ae7295705
commit defea69aa3
51 changed files with 2711 additions and 3185 deletions
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3
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/client/api/IGenericClient.java
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@ -1,5 +1,6 @@
package ca.uhn.fhir.rest.client.api;
import org.hl7.fhir.instance.model.api.IBaseBundle;
import org.hl7.fhir.instance.model.api.IBaseResource;
import ca.uhn.fhir.model.primitive.IdDt;
@ -121,7 +122,7 @@ public interface IGenericClient extends IRestfulClient {
* and how it should be returned. See the <a href="http://www.hl7.org/fhir/search.html">specification on search</a>
* for more information.
*/
IUntypedQuery search();
<T extends IBaseBundle> IUntypedQuery<T> search();
/**
* If set to <code>true</code>, the client will log all requests and all responses. This is probably not a good production setting since it will result in a lot of extra logging, but it can be

6
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IBaseQuery.java
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@ -1,5 +1,9 @@
package ca.uhn.fhir.rest.gclient;
import java.util.*;
import ca.uhn.fhir.model.api.IQueryParameterType;
/*
* #%L
* HAPI FHIR - Core Library
@ -24,6 +28,8 @@ public interface IBaseQuery<T extends IBaseQuery<?>> {
T where(ICriterion<?> theCriterion);
T where(Map<String, List<IQueryParameterType>> theCriterion);
T and(ICriterion<?> theCriterion);
}

2
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IClientExecutable.java
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@ -27,7 +27,7 @@ import ca.uhn.fhir.rest.api.SummaryEnum;
*/
public interface IClientExecutable<T extends IClientExecutable<?,?>, Y> {
public interface IClientExecutable<T extends IClientExecutable<?,Y>, Y> {
/**
* If set to true, the client will log the request and response to the SLF4J logger. This can be useful for

2
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IMetaAddOrDeleteSourced.java
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@ -24,5 +24,5 @@ import org.hl7.fhir.instance.model.api.IBaseMetaType;
public interface IMetaAddOrDeleteSourced {
<T extends IBaseMetaType> IClientExecutable<IClientExecutable<?, ?>, T> meta(T theMeta);
<T extends IBaseMetaType> IClientExecutable<IClientExecutable<?, T>, T> meta(T theMeta);
}

12
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IMetaGetUnsourced.java
View File

@ -10,7 +10,7 @@ package ca.uhn.fhir.rest.gclient;
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
@ -25,16 +25,16 @@ import org.hl7.fhir.instance.model.api.IIdType;
public interface IMetaGetUnsourced<T extends IBaseMetaType> {
IClientExecutable<IClientExecutable<?,?>, T> fromServer();
IClientExecutable<IClientExecutable<?, T>, T> fromServer();
IClientExecutable<IClientExecutable<?,?>, T> fromType(String theResourceName);
IClientExecutable<IClientExecutable<?, T>, T> fromType(String theResourceName);
/**
* Get the meta from a resource instance by ID.
*
* @param theId The ID. Must contain both a resource type and an ID part
* @param theId
* The ID. Must contain both a resource type and an ID part
*/
IClientExecutable<IClientExecutable<?,?>, T> fromResource(IIdType theId);
IClientExecutable<IClientExecutable<?, T>, T> fromResource(IIdType theId);
}

34
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IQuery.java
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@ -28,7 +28,7 @@ import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.rest.api.SearchStyleEnum;
import ca.uhn.fhir.rest.param.DateRangeParam;
public interface IQuery extends IBaseQuery<IQuery> {
public interface IQuery<Y> extends IBaseQuery<IQuery<Y>>, IClientExecutable<IQuery<Y>, Y> {
/**
* Add an "_include" specification or an "_include:recurse" specification. If you are using
@ -39,9 +39,9 @@ public interface IQuery extends IBaseQuery<IQuery> {
* <li><b>No Recurse:</b> <code>.include(Patient.INCLUDE_ORGANIZATION.asNonRecursive())</code>
* </ul>
*/
IQuery include(Include theInclude);
IQuery<Y> include(Include theInclude);
ISort sort();
ISort<Y> sort();
/**
* Specifies the <code>_count</code> parameter, which indicates to the server how many resources should be returned
@ -50,7 +50,7 @@ public interface IQuery extends IBaseQuery<IQuery> {
* @deprecated This parameter is badly named, since FHIR calls this parameter "_count" and not "_limit". Use {@link #count(int)} instead (it also sets the _count parameter)
*/
@Deprecated
IQuery limitTo(int theLimitTo);
IQuery<Y> limitTo(int theLimitTo);
/**
* Specifies the <code>_count</code> parameter, which indicates to the server how many resources should be returned
@ -58,7 +58,7 @@ public interface IQuery extends IBaseQuery<IQuery> {
*
* @since 1.4
*/
IQuery count(int theCount);
IQuery<Y> count(int theCount);
/**
* Match only resources where the resource has the given tag. This parameter corresponds to
@ -66,7 +66,7 @@ public interface IQuery extends IBaseQuery<IQuery> {
* @param theSystem The tag code system, or <code>null</code> to match any code system (this may not be supported on all servers)
* @param theCode The tag code. Must not be <code>null</code> or empty.
*/
IQuery withTag(String theSystem, String theCode);
IQuery<Y> withTag(String theSystem, String theCode);
/**
* Match only resources where the resource has the given security tag. This parameter corresponds to
@ -74,21 +74,21 @@ public interface IQuery extends IBaseQuery<IQuery> {
* @param theSystem The tag code system, or <code>null</code> to match any code system (this may not be supported on all servers)
* @param theCode The tag code. Must not be <code>null</code> or empty.
*/
IQuery withSecurity(String theSystem, String theCode);
IQuery<Y> withSecurity(String theSystem, String theCode);
/**
* Match only resources where the resource has the given profile declaration. This parameter corresponds to
* the <code>_profile</code> URL parameter.
* @param theProfileUri The URI of a given profile to search for resources which match
*/
IQuery withProfile(String theProfileUri);
IQuery<Y> withProfile(String theProfileUri);
/**
* Matches any of the profiles given as argument. This would result in an OR search for resources matching one or more profiles.
* To do an AND search, make multiple calls to {@link #withProfile(String)}.
* @param theProfileUris The URIs of a given profile to search for resources which match.
*/
IQuery withAnyProfile(Collection<String> theProfileUris);
IQuery<Y> withAnyProfile(Collection<String> theProfileUris);
/**
* Forces the query to perform the search using the given method (allowable methods are described in the
@ -100,44 +100,44 @@ public interface IQuery extends IBaseQuery<IQuery> {
* @see SearchStyleEnum
* @since 0.6
*/
IQuery usingStyle(SearchStyleEnum theStyle);
IQuery<Y> usingStyle(SearchStyleEnum theStyle);
IQuery withIdAndCompartment(String theResourceId, String theCompartmentName);
IQuery<Y> withIdAndCompartment(String theResourceId, String theCompartmentName);
/**
* Add a "_revinclude" specification
*
* @since HAPI FHIR 1.0 - Note that option was added to FHIR itself in DSTU2
*/
IQuery revInclude(Include theIncludeTarget);
IQuery<Y> revInclude(Include theIncludeTarget);
/**
* Add a "_lastUpdated" specification
*
* @since HAPI FHIR 1.1 - Note that option was added to FHIR itself in DSTU2
*/
IQuery lastUpdated(DateRangeParam theLastUpdated);
IQuery<Y> lastUpdated(DateRangeParam theLastUpdated);
/**
* Request that the client return the specified bundle type, e.g. <code>org.hl7.fhir.instance.model.Bundle.class</code>
* or <code>ca.uhn.fhir.model.dstu2.resource.Bundle.class</code>
*/
<B extends IBaseBundle> IQueryTyped<B> returnBundle(Class<B> theClass);
<B extends IBaseBundle> IQuery<B> returnBundle(Class<B> theClass);
/**
* {@inheritDoc}
*/
// This is here as an overridden method to allow mocking clients with Mockito to work
@Override
IQuery where(ICriterion<?> theCriterion);
IQuery<Y> where(ICriterion<?> theCriterion);
/**
* {@inheritDoc}
*/
// This is here as an overridden method to allow mocking clients with Mockito to work
@Override
IQuery and(ICriterion<?> theCriterion);
IQuery<Y> and(ICriterion<?> theCriterion);
// <T extends IBaseBundle> T execute();
// Y execute();
}

7
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IQueryTyped.java
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@ -1,7 +0,0 @@
package ca.uhn.fhir.rest.gclient;
import org.hl7.fhir.instance.model.api.IBaseBundle;
public interface IQueryTyped<T extends IBaseBundle> extends IQuery, IClientExecutable<IClientExecutable<?,?>, T> {
}

12
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/ISort.java
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@ -20,19 +20,19 @@ package ca.uhn.fhir.rest.gclient;
* #L%
*/
public interface ISort {
public interface ISort<T> {
/**
* Sort ascending
*/
IQuery ascending(IParam theParam);
IQuery<T> ascending(IParam theParam);
/**
* Sort ascending
*
* @param theParam The param name, e.g. "address"
*/
IQuery ascending(String theParam);
IQuery<T> ascending(String theParam);
/**
* Sort by the default order. Note that as of STU3, there is no longer
@ -40,7 +40,7 @@ public interface ISort {
* technically implies "ascending" but it makes more sense to use
* {@link #ascending(IParam)}
*/
IQuery defaultOrder(IParam theParam);
IQuery<T> defaultOrder(IParam theParam);
/**
* Sort descending
@ -48,13 +48,13 @@ public interface ISort {
* @param theParam A query param - Could be a constant such as <code>Patient.ADDRESS</code> or a custom
* param such as <code>new StringClientParam("foo")</code>
*/
IQuery descending(IParam theParam);
IQuery<T> descending(IParam theParam);
/**
* Sort ascending
*
* @param theParam The param name, e.g. "address"
*/
IQuery descending(String theParam);
IQuery<T> descending(String theParam);
}

10
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/gclient/IUntypedQuery.java
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@ -22,13 +22,13 @@ package ca.uhn.fhir.rest.gclient;
import org.hl7.fhir.instance.model.api.IBaseResource;
public interface IUntypedQuery {
public interface IUntypedQuery<T> {
IQuery forAllResources();
IQuery<T> forAllResources();
IQuery forResource(String theResourceName);
IQuery<T> forResource(String theResourceName);
IQuery forResource(Class<? extends IBaseResource> theClass);
IQuery<T> forResource(Class<? extends IBaseResource> theClass);
/**
* Perform a search directly by URL. It is usually better to construct the URL using the {@link #forAllResources()}, {@link #forResource(Class)} etc, but sometimes it is useful to simply search by
@ -38,6 +38,6 @@ public interface IUntypedQuery {
* The URL to search for. Note that this URL may be complete (e.g. "http://example.com/base/Patient?name=foo") in which case the client's base URL will be ignored. Or it can be relative
* (e.g. "Patient?name=foo") in which case the client's base URL will be used.
*/
IQuery byUrl(String theSearchUrl);
IQuery<T> byUrl(String theSearchUrl);
}

37
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/param/BaseParamWithPrefix.java
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@ -1,8 +1,11 @@
package ca.uhn.fhir.rest.param;
import static org.apache.commons.lang3.StringUtils.isBlank;
public abstract class BaseParamWithPrefix<T extends BaseParam> extends BaseParam {
private static final long serialVersionUID = 1L;
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(BaseParamWithPrefix.class);
private ParamPrefixEnum myPrefix;
@ -32,7 +35,39 @@ public abstract class BaseParamWithPrefix<T extends BaseParam> extends BaseParam
}
String prefix = theString.substring(0, offset);
myPrefix = ParamPrefixEnum.forValue(prefix);
if (!isBlank(prefix)) {
myPrefix = ParamPrefixEnum.forValue(prefix);
if (myPrefix == null) {
switch (prefix) {
case ">=":
myPrefix = ParamPrefixEnum.GREATERTHAN_OR_EQUALS;
break;
case ">":
myPrefix = ParamPrefixEnum.GREATERTHAN;
break;
case "<=":
myPrefix = ParamPrefixEnum.LESSTHAN_OR_EQUALS;
break;
case "<":
myPrefix = ParamPrefixEnum.LESSTHAN;
break;
case "~":
myPrefix = ParamPrefixEnum.APPROXIMATE;
break;
default :
ourLog.warn("Invalid prefix being ignored: {}", prefix);
break;
}
if (myPrefix != null) {
ourLog.warn("Date parameter has legacy prefix '{}' which has been removed from FHIR. This should be replaced with '{}'", prefix, myPrefix);
}
}
}
return theString.substring(offset);
}

7
hapi-fhir-base/src/main/java/ca/uhn/fhir/util/BundleUtil.java
View File

@ -143,8 +143,9 @@ public class BundleUtil {
/**
* Extract all of the resources of a given type from a given bundle
*/
public static List<IBaseResource> toListOfResourcesOfType(FhirContext theContext, IBaseBundle theBundle, Class<? extends IBaseResource> theTypeToInclude) {
List<IBaseResource> retVal = new ArrayList<IBaseResource>();
@SuppressWarnings("unchecked")
public static <T extends IBaseResource> List<T> toListOfResourcesOfType(FhirContext theContext, IBaseBundle theBundle, Class<T> theTypeToInclude) {
List<T> retVal = new ArrayList<T>();
RuntimeResourceDefinition def = theContext.getResourceDefinition(theBundle);
BaseRuntimeChildDefinition entryChild = def.getChildByName("entry");
@ -157,7 +158,7 @@ public class BundleUtil {
if (theTypeToInclude != null && !theTypeToInclude.isAssignableFrom(next.getClass())) {
continue;
}
retVal.add((IBaseResource) next);
retVal.add((T) next);
}
}

12
hapi-fhir-base/src/main/java/ca/uhn/fhir/validation/BaseValidationContext.java
View File

@ -29,10 +29,15 @@ import ca.uhn.fhir.util.ObjectUtil;
abstract class BaseValidationContext<T> implements IValidationContext<T> {
protected final FhirContext myFhirContext;
private List<SingleValidationMessage> myMessages = new ArrayList<SingleValidationMessage>();
private List<SingleValidationMessage> myMessages;
BaseValidationContext(FhirContext theFhirContext) {
this(theFhirContext, new ArrayList<SingleValidationMessage>());
}
BaseValidationContext(FhirContext theFhirContext, List<SingleValidationMessage> theMessages) {
myFhirContext = theFhirContext;
myMessages = theMessages;
}
@Override
@ -46,6 +51,11 @@ abstract class BaseValidationContext<T> implements IValidationContext<T> {
return myFhirContext;
}
@Override
public List<SingleValidationMessage> getMessages() {
return myMessages;
}
@Override
public ValidationResult toResult() {
return new ValidationResult(myFhirContext, myMessages);

4
hapi-fhir-base/src/main/java/ca/uhn/fhir/validation/IValidationContext.java
View File

@ -1,5 +1,7 @@
package ca.uhn.fhir.validation;
import java.util.List;
/*
* #%L
* HAPI FHIR - Core Library
@ -35,6 +37,8 @@ public interface IValidationContext<T> {
void addValidationMessage(SingleValidationMessage theMessage);
List<SingleValidationMessage> getMessages();
ValidationResult toResult();
}

23
hapi-fhir-base/src/main/java/ca/uhn/fhir/validation/ValidationContext.java
View File

@ -1,5 +1,8 @@
package ca.uhn.fhir.validation;
import java.util.ArrayList;
import java.util.List;
/*
* #%L
* HAPI FHIR - Core Library
@ -37,7 +40,11 @@ public class ValidationContext<T> extends BaseValidationContext<T> implements IV
private final EncodingEnum myResourceAsStringEncoding;
private ValidationContext(FhirContext theContext, T theResource, IEncoder theEncoder) {
super(theContext);
this(theContext, theResource, theEncoder, new ArrayList<SingleValidationMessage>());
}
private ValidationContext(FhirContext theContext, T theResource, IEncoder theEncoder, List<SingleValidationMessage> theMessages) {
super(theContext, theMessages);
myResource = theResource;
myEncoder = theEncoder;
if (theEncoder != null) {
@ -123,4 +130,18 @@ public class ValidationContext<T> extends BaseValidationContext<T> implements IV
};
}
public static IValidationContext<IBaseResource> subContext(final IValidationContext<IBaseResource> theCtx, final IBaseResource theResource) {
return new ValidationContext<IBaseResource>(theCtx.getFhirContext(), theResource, new IEncoder() {
@Override
public String encode() {
return theCtx.getFhirContext().newXmlParser().encodeResourceToString(theResource);
}
@Override
public EncodingEnum getEncoding() {
return EncodingEnum.XML;
}
}, theCtx.getMessages());
}
}

10
hapi-fhir-base/src/main/java/ca/uhn/fhir/validation/schematron/SchematronBaseValidator.java
View File

@ -27,6 +27,7 @@ import java.util.*;
import javax.xml.transform.stream.StreamSource;
import org.apache.commons.io.IOUtils;
import org.hl7.fhir.instance.model.api.IBaseBundle;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.oclc.purl.dsdl.svrl.SchematronOutputType;
@ -39,6 +40,7 @@ import com.phloc.schematron.xslt.SchematronResourceSCH;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.rest.api.EncodingEnum;
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
import ca.uhn.fhir.util.BundleUtil;
import ca.uhn.fhir.validation.*;
/**
@ -57,6 +59,14 @@ public class SchematronBaseValidator implements IValidatorModule {
@Override
public void validateResource(IValidationContext<IBaseResource> theCtx) {
if (theCtx.getResource() instanceof IBaseBundle) {
IBaseBundle bundle = (IBaseBundle) theCtx.getResource();
List<IBaseResource> subResources = BundleUtil.toListOfResources(myCtx, bundle);
for (IBaseResource nextSubResource : subResources) {
validateResource(ValidationContext.subContext(theCtx, nextSubResource));
}
}
ISchematronResource sch = getSchematron(theCtx);
String resourceAsString;
if (theCtx.getResourceAsStringEncoding() == EncodingEnum.XML) {

567
hapi-fhir-client/src/main/java/ca/uhn/fhir/rest/client/impl/GenericClient.java
View File

@ -25,6 +25,7 @@ import static org.apache.commons.lang3.StringUtils.isNotBlank;
import java.io.IOException;
import java.io.Reader;
import java.util.*;
import java.util.Map.Entry;
import org.apache.commons.io.IOUtils;
import org.apache.commons.lang3.StringUtils;
@ -75,13 +76,11 @@ public class GenericClient extends BaseClient implements IGenericClient {
return new CreateInternal();
}
@Override
public IDelete delete() {
return new DeleteInternal();
}
private <T extends IBaseResource> T doReadOrVRead(final Class<T> theType, IIdType theId, boolean theVRead, ICallable<T> theNotModifiedHandler, String theIfVersionMatches, Boolean thePrettyPrint,
SummaryEnum theSummary, EncodingEnum theEncoding, Set<String> theSubsetElements) {
String resName = toResourceName(theType);
@ -165,15 +164,11 @@ public class GenericClient extends BaseClient implements IGenericClient {
return theResource.getIdElement().getIdPart();
}
@Override
public IHistory history() {
return new HistoryInternal();
}
// @Override
// public <T extends IBaseResource> T read(final Class<T> theType, IdDt theId) {
// return doReadOrVRead(theType, theId, false, null, null);
@ -204,6 +199,11 @@ public class GenericClient extends BaseClient implements IGenericClient {
return new OperationInternal();
}
@Override
public IPatch patch() {
return new PatchInternal();
}
@Override
public IRead read() {
return new ReadInternal();
@ -234,12 +234,12 @@ public class GenericClient extends BaseClient implements IGenericClient {
return read(def.getImplementingClass(), id);
}
@SuppressWarnings({ "rawtypes", "unchecked" })
@Override
public IUntypedQuery search() {
return new SearchInternal();
}
/**
* For now, this is a part of the internal API of HAPI - Use with caution as this method may change!
*/
@ -262,12 +262,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return new TransactionInternal();
}
@Override
public IPatch patch() {
return new PatchInternal();
}
@Override
public IUpdate update() {
return new UpdateInternal();
@ -366,18 +360,13 @@ public class GenericClient extends BaseClient implements IGenericClient {
return b.toString();
}
private abstract class BaseClientExecutable<T extends IClientExecutable<?, ?>, Y> implements IClientExecutable<T, Y> {
private abstract class BaseClientExecutable<T extends IClientExecutable<?, Y>, Y> implements IClientExecutable<T, Y> {
protected EncodingEnum myParamEncoding;
private List<Class<? extends IBaseResource>> myPreferResponseTypes;
protected Boolean myPrettyPrint;
private boolean myQueryLogRequestAndResponse;
private HashSet<String> mySubsetElements;
protected SummaryEnum mySummaryMode;
@Deprecated // override deprecated method
@ -491,25 +480,61 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
private abstract class BaseSearch<EXEC extends IClientExecutable<?, OUTPUT>, QUERY extends IBaseQuery<QUERY>, OUTPUT> extends BaseClientExecutable<EXEC, OUTPUT> implements IBaseQuery<QUERY> {
private class CreateInternal extends BaseClientExecutable<ICreateTyped, MethodOutcome> implements ICreate, ICreateTyped, ICreateWithQuery, ICreateWithQueryTyped {
private Map<String, List<String>> myParams = new LinkedHashMap<>();
private CriterionList myCriterionList;
@Override
public QUERY and(ICriterion<?> theCriterion) {
return where(theCriterion);
}
public Map<String, List<String>> getParamMap() {
return myParams;
}
@SuppressWarnings("unchecked")
@Override
public QUERY where(ICriterion<?> theCriterion) {
ICriterionInternal criterion = (ICriterionInternal) theCriterion;
String parameterName = criterion.getParameterName();
String parameterValue = criterion.getParameterValue(myContext);
if (isNotBlank(parameterValue)) {
addParam(myParams, parameterName, parameterValue);
}
return (QUERY) this;
}
@SuppressWarnings("unchecked")
@Override
public QUERY where(Map<String, List<IQueryParameterType>> theCriterion) {
Validate.notNull(theCriterion, "theCriterion must not be null");
for (Entry<String, List<IQueryParameterType>> nextEntry : theCriterion.entrySet()) {
String nextKey = nextEntry.getKey();
List<IQueryParameterType> nextValues = nextEntry.getValue();
for (IQueryParameterType nextValue : nextValues) {
addParam(myParams, nextKey, nextValue.getValueAsQueryToken(myContext));
}
}
return (QUERY) this;
}
}
private class CreateInternal extends BaseSearch<ICreateTyped, ICreateWithQueryTyped, MethodOutcome> implements ICreate, ICreateTyped, ICreateWithQuery, ICreateWithQueryTyped {
private boolean myConditional;
private String myId;
private PreferReturnEnum myPrefer;
private IBaseResource myResource;
private String myResourceBody;
private String mySearchUrl;
@Override
public ICreateWithQueryTyped and(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public ICreateWithQuery conditional() {
myCriterionList = new CriterionList();
myConditional = true;
return this;
}
@ -534,8 +559,8 @@ public class GenericClient extends BaseClient implements IGenericClient {
BaseHttpClientInvocation invocation;
if (mySearchUrl != null) {
invocation = MethodUtil.createCreateInvocation(myResource, myResourceBody, myId, myContext, mySearchUrl);
} else if (myCriterionList != null) {
invocation = MethodUtil.createCreateInvocation(myResource, myResourceBody, myId, myContext, myCriterionList.toParamList());
} else if (myConditional) {
invocation = MethodUtil.createCreateInvocation(myResource, myResourceBody, myId, myContext, getParamMap());
} else {
invocation = MethodUtil.createCreateInvocation(myResource, myResourceBody, myId, myContext);
}
@ -569,12 +594,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public ICreateWithQueryTyped where(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public CreateInternal withId(IdDt theId) {
myId = theId.getIdPart();
@ -589,49 +608,20 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
private class CriterionList extends ArrayList<ICriterionInternal> {
private class DeleteInternal extends BaseSearch<IDeleteTyped, IDeleteWithQueryTyped, IBaseOperationOutcome> implements IDelete, IDeleteTyped, IDeleteWithQuery, IDeleteWithQueryTyped {
private static final long serialVersionUID = 1L;
public void populateParamList(Map<String, List<String>> theParams) {
for (ICriterionInternal next : this) {
String parameterName = next.getParameterName();
String parameterValue = next.getParameterValue(myContext);
if (isNotBlank(parameterValue)) {
addParam(theParams, parameterName, parameterValue);
}
}
}
public Map<String, List<String>> toParamList() {
LinkedHashMap<String, List<String>> retVal = new LinkedHashMap<String, List<String>>();
populateParamList(retVal);
return retVal;
}
}
private class DeleteInternal extends BaseClientExecutable<IDeleteTyped, IBaseOperationOutcome> implements IDelete, IDeleteTyped, IDeleteWithQuery, IDeleteWithQueryTyped {
private CriterionList myCriterionList;
private boolean myConditional;
private IIdType myId;
private String myResourceType;
private String mySearchUrl;
@Override
public IDeleteWithQueryTyped and(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public IBaseOperationOutcome execute() {
HttpDeleteClientInvocation invocation;
if (myId != null) {
invocation = DeleteMethodBinding.createDeleteInvocation(getFhirContext(), myId);
} else if (myCriterionList != null) {
Map<String, List<String>> params = myCriterionList.toParamList();
invocation = DeleteMethodBinding.createDeleteInvocation(getFhirContext(), myResourceType, params);
} else if (myConditional) {
invocation = DeleteMethodBinding.createDeleteInvocation(getFhirContext(), myResourceType, getParamMap());
} else {
invocation = DeleteMethodBinding.createDeleteInvocation(getFhirContext(), mySearchUrl);
}
@ -679,7 +669,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
@Override
public IDeleteWithQuery resourceConditionalByType(Class<? extends IBaseResource> theResourceType) {
Validate.notNull(theResourceType, "theResourceType can not be null");
myCriterionList = new CriterionList();
myConditional = true;
myResourceType = myContext.getResourceDefinition(theResourceType).getName();
return this;
}
@ -691,7 +681,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
throw new IllegalArgumentException("Unknown resource type: " + theResourceType);
}
myResourceType = theResourceType;
myCriterionList = new CriterionList();
myConditional = true;
return this;
}
@ -701,11 +691,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public IDeleteWithQueryTyped where(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
}
@SuppressWarnings({ "rawtypes", "unchecked" })
@ -755,7 +740,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@SuppressWarnings("rawtypes")
private class HistoryInternal extends BaseClientExecutable implements IHistory, IHistoryUntyped, IHistoryTyped {
@ -854,7 +838,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return new GetPageInternal(myPageUrl, theBundleType);
}
@Override
public IGetPageUntyped byUrl(String thePageUrl) {
if (isBlank(thePageUrl)) {
@ -864,7 +847,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public <T extends IBaseBundle> IGetPageTyped<T> next(T theBundle) {
return nextOrPrevious("next", theBundle);
@ -898,13 +880,11 @@ public class GenericClient extends BaseClient implements IGenericClient {
throw new IllegalArgumentException(myContext.getLocalizer().getMessage(GenericClient.class, "noPagingLinkFoundInBundle", theWantRel));
}
@Override
public <T extends IBaseBundle> IGetPageTyped<T> previous(T theBundle) {
return nextOrPrevious(PREVIOUS, theBundle);
}
}
@SuppressWarnings("rawtypes")
@ -993,7 +973,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
@SuppressWarnings("unchecked")
@Override
public <T extends IBaseMetaType> IClientExecutable<IClientExecutable<?, ?>, T> meta(T theMeta) {
public <T extends IBaseMetaType> IClientExecutable<IClientExecutable<?, T>, T> meta(T theMeta) {
Validate.notNull(theMeta, "theMeta must not be null");
myMeta = theMeta;
myMetaType = myMeta.getClass();
@ -1062,56 +1042,15 @@ public class GenericClient extends BaseClient implements IGenericClient {
implements IOperation, IOperationUnnamed, IOperationUntyped, IOperationUntypedWithInput, IOperationUntypedWithInputAndPartialOutput, IOperationProcessMsg, IOperationProcessMsgMode {
private IIdType myId;
private Boolean myIsAsync;
private IBaseBundle myMsgBundle;
private String myOperationName;
private IBaseParameters myParameters;
private RuntimeResourceDefinition myParametersDef;
private String myResponseUrl;
private Class myReturnResourceType;
private Class<? extends IBaseResource> myType;
private boolean myUseHttpGet;
private Class myReturnResourceType;
private IBaseBundle myMsgBundle;
private String myResponseUrl;
private Boolean myIsAsync;
@SuppressWarnings("unchecked")
@Override
public IOperationProcessMsgMode setMessageBundle(IBaseBundle theMsgBundle) {
Validate.notNull(theMsgBundle, "theMsgBundle must not be null");
/*
* Validate.isTrue(theMsgBundle.getType().getValueAsEnum() == BundleTypeEnum.MESSAGE);
* Validate.isTrue(theMsgBundle.getEntries().size() > 0);
* Validate.notNull(theMsgBundle.getEntries().get(0).getResource(), "Message Bundle first entry must be a MessageHeader resource");
* Validate.isTrue(theMsgBundle.getEntries().get(0).getResource().getResourceName().equals("MessageHeader"), "Message Bundle first entry must be a MessageHeader resource");
*/
myMsgBundle = theMsgBundle;
return this;
}
@Override
public IOperationProcessMsg setResponseUrlParam(String responseUrl) {
Validate.notEmpty(responseUrl, "responseUrl must not be null");
Validate.matchesPattern(responseUrl, "^(https?)://[-a-zA-Z0-9+&@#/%?=~_|!:,.;]*[-a-zA-Z0-9+&@#/%=~_|]", "responseUrl must be a valid URL");
myResponseUrl = responseUrl;
return this;
}
@Override
public IOperationProcessMsgMode asynchronous(Class theResponseClass) {
myIsAsync = true;
Validate.notNull(theResponseClass, "theReturnType must not be null");
Validate.isTrue(IBaseResource.class.isAssignableFrom(theResponseClass), "theReturnType must be a class which extends from IBaseResource");
myReturnResourceType = theResponseClass;
return this;
}
@Override
public IOperationProcessMsgMode synchronous(Class theResponseClass) {
myIsAsync = false;
Validate.notNull(theResponseClass, "theReturnType must not be null");
Validate.isTrue(IBaseResource.class.isAssignableFrom(theResponseClass), "theReturnType must be a class which extends from IBaseResource");
myReturnResourceType = theResponseClass;
return this;
}
@SuppressWarnings("unchecked")
private void addParam(String theName, IBase theValue) {
@ -1143,12 +1082,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
}
@Override
public IOperationProcessMsg processMessage() {
myOperationName = Constants.EXTOP_PROCESS_MESSAGE;
return this;
}
private void addParam(String theName, IQueryParameterType theValue) {
IPrimitiveType<?> stringType = ParametersUtil.createString(myContext, theValue.getValueAsQueryToken(myContext));
addParam(theName, stringType);
@ -1169,6 +1102,15 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public IOperationProcessMsgMode asynchronous(Class theResponseClass) {
myIsAsync = true;
Validate.notNull(theResponseClass, "theReturnType must not be null");
Validate.isTrue(IBaseResource.class.isAssignableFrom(theResponseClass), "theReturnType must be a class which extends from IBaseResource");
myReturnResourceType = theResponseClass;
return this;
}
@SuppressWarnings("unchecked")
@Override
public Object execute() {
@ -1259,6 +1201,52 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public IOperationProcessMsg processMessage() {
myOperationName = Constants.EXTOP_PROCESS_MESSAGE;
return this;
}
@Override
public IOperationUntypedWithInput returnResourceType(Class theReturnType) {
Validate.notNull(theReturnType, "theReturnType must not be null");
Validate.isTrue(IBaseResource.class.isAssignableFrom(theReturnType), "theReturnType must be a class which extends from IBaseResource");
myReturnResourceType = theReturnType;
return this;
}
@SuppressWarnings("unchecked")
@Override
public IOperationProcessMsgMode setMessageBundle(IBaseBundle theMsgBundle) {
Validate.notNull(theMsgBundle, "theMsgBundle must not be null");
/*
* Validate.isTrue(theMsgBundle.getType().getValueAsEnum() == BundleTypeEnum.MESSAGE);
* Validate.isTrue(theMsgBundle.getEntries().size() > 0);
* Validate.notNull(theMsgBundle.getEntries().get(0).getResource(), "Message Bundle first entry must be a MessageHeader resource");
* Validate.isTrue(theMsgBundle.getEntries().get(0).getResource().getResourceName().equals("MessageHeader"), "Message Bundle first entry must be a MessageHeader resource");
*/
myMsgBundle = theMsgBundle;
return this;
}
@Override
public IOperationProcessMsg setResponseUrlParam(String responseUrl) {
Validate.notEmpty(responseUrl, "responseUrl must not be null");
Validate.matchesPattern(responseUrl, "^(https?)://[-a-zA-Z0-9+&@#/%?=~_|!:,.;]*[-a-zA-Z0-9+&@#/%=~_|]", "responseUrl must be a valid URL");
myResponseUrl = responseUrl;
return this;
}
@Override
public IOperationProcessMsgMode synchronous(Class theResponseClass) {
myIsAsync = false;
Validate.notNull(theResponseClass, "theReturnType must not be null");
Validate.isTrue(IBaseResource.class.isAssignableFrom(theResponseClass), "theReturnType must be a class which extends from IBaseResource");
myReturnResourceType = theResponseClass;
return this;
}
@Override
public IOperationUntypedWithInput useHttpGet() {
myUseHttpGet = true;
@ -1319,14 +1307,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public IOperationUntypedWithInput returnResourceType(Class theReturnType) {
Validate.notNull(theReturnType, "theReturnType must not be null");
Validate.isTrue(IBaseResource.class.isAssignableFrom(theReturnType), "theReturnType must be a class which extends from IBaseResource");
myReturnResourceType = theReturnType;
return this;
}
}
private final class OperationOutcomeResponseHandler implements IClientResponseHandler<IBaseOperationOutcome> {
@ -1386,6 +1366,119 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
}
private class PatchInternal extends BaseSearch<IPatchExecutable, IPatchWithQueryTyped, MethodOutcome> implements IPatch, IPatchWithBody, IPatchExecutable, IPatchWithQuery, IPatchWithQueryTyped {
private boolean myConditional;
private IIdType myId;
private String myPatchBody;
private PatchTypeEnum myPatchType;
private PreferReturnEnum myPrefer;
private String myResourceType;
private String mySearchUrl;
@Override
public IPatchWithQuery conditional(Class<? extends IBaseResource> theClass) {
Validate.notNull(theClass, "theClass must not be null");
String resourceType = myContext.getResourceDefinition(theClass).getName();
return conditional(resourceType);
}
@Override
public IPatchWithQuery conditional(String theResourceType) {
Validate.notBlank(theResourceType, "theResourceType must not be null");
myResourceType = theResourceType;
myConditional = true;
return this;
}
// TODO: This is not longer used.. Deprecate it or just remove it?
@Override
public IPatchWithBody conditionalByUrl(String theSearchUrl) {
mySearchUrl = validateAndEscapeConditionalUrl(theSearchUrl);
return this;
}
@Override
public MethodOutcome execute() {
if (myPatchType == null) {
throw new InvalidRequestException("No patch type supplied, cannot invoke server");
}
if (myPatchBody == null) {
throw new InvalidRequestException("No patch body supplied, cannot invoke server");
}
BaseHttpClientInvocation invocation;
if (isNotBlank(mySearchUrl)) {
invocation = MethodUtil.createPatchInvocation(myContext, mySearchUrl, myPatchType, myPatchBody);
} else if (myConditional) {
invocation = MethodUtil.createPatchInvocation(myContext, myPatchType, myPatchBody, myResourceType, getParamMap());
} else {
if (myId == null || myId.hasIdPart() == false) {
throw new InvalidRequestException("No ID supplied for resource to patch, can not invoke server");
}
invocation = MethodUtil.createPatchInvocation(myContext, myId, myPatchType, myPatchBody);
}
addPreferHeader(myPrefer, invocation);
OutcomeResponseHandler binding = new OutcomeResponseHandler(myPrefer);
Map<String, List<String>> params = new HashMap<String, List<String>>();
return invoke(params, binding, invocation);
}
@Override
public IPatchExecutable prefer(PreferReturnEnum theReturn) {
myPrefer = theReturn;
return this;
}
@Override
public IPatchWithBody withBody(String thePatchBody) {
Validate.notBlank(thePatchBody, "thePatchBody must not be blank");
myPatchBody = thePatchBody;
EncodingEnum encoding = EncodingEnum.detectEncodingNoDefault(thePatchBody);
if (encoding == EncodingEnum.XML) {
myPatchType = PatchTypeEnum.XML_PATCH;
} else if (encoding == EncodingEnum.JSON) {
myPatchType = PatchTypeEnum.JSON_PATCH;
} else {
throw new IllegalArgumentException("Unable to determine encoding of patch");
}
return this;
}
@Override
public IPatchExecutable withId(IIdType theId) {
if (theId == null) {
throw new NullPointerException("theId can not be null");
}
if (theId.hasIdPart() == false) {
throw new NullPointerException("theId must not be blank and must contain an ID, found: " + theId.getValue());
}
myId = theId;
return this;
}
@Override
public IPatchExecutable withId(String theId) {
if (theId == null) {
throw new NullPointerException("theId can not be null");
}
if (isBlank(theId)) {
throw new NullPointerException("theId must not be blank and must contain an ID, found: " + theId);
}
myId = new IdDt(theId);
return this;
}
}
@SuppressWarnings({ "rawtypes", "unchecked" })
private class ReadInternal extends BaseClientExecutable implements IRead, IReadTyped, IReadExecutable {
private IIdType myId;
@ -1533,10 +1626,9 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@SuppressWarnings({ "rawtypes", "unchecked" })
private class SearchInternal extends BaseClientExecutable implements IQuery, IUntypedQuery, IQueryTyped {
private class SearchInternal<OUTPUT> extends BaseSearch<IQuery<OUTPUT>, IQuery<OUTPUT>, OUTPUT> implements IQuery<OUTPUT>, IUntypedQuery<IQuery<OUTPUT>> {
private String myCompartmentName;
private CriterionList myCriterion = new CriterionList();
private List<Include> myInclude = new ArrayList<Include>();
private DateRangeParam myLastUpdated;
private Integer myParamLimit;
@ -1558,12 +1650,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
mySearchUrl = null;
}
@Override
public IQuery and(ICriterion<?> theCriterion) {
myCriterion.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public IQuery byUrl(String theSearchUrl) {
Validate.notBlank(theSearchUrl, "theSearchUrl must not be blank/null");
@ -1603,15 +1689,9 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@Override
public Object execute() {
public OUTPUT execute() {
Map<String, List<String>> params = new LinkedHashMap<String, List<String>>();
// Map<String, List<String>> initial = createExtraParams();
// if (initial != null) {
// params.putAll(initial);
// }
myCriterion.populateParamList(params);
Map<String, List<String>> params = getParamMap();
for (TokenParam next : myTags) {
addParam(params, Constants.PARAM_TAG, next.getValueAsQueryToken(myContext));
@ -1701,7 +1781,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
invocation = SearchMethodBinding.createSearchInvocation(myContext, myResourceName, params, resourceId, myCompartmentName, mySearchStyle);
}
return invoke(params, binding, invocation);
return (OUTPUT) invoke(params, binding, invocation);
}
@ -1711,7 +1791,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@Override
public IQuery forResource(Class<? extends IBaseResource> theResourceType) {
public IQuery forResource(Class theResourceType) {
setType(theResourceType);
return this;
}
@ -1741,7 +1821,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@Override
public IQueryTyped returnBundle(Class theClass) {
public IQuery returnBundle(Class theClass) {
if (theClass == null) {
throw new NullPointerException("theClass must not be null");
}
@ -1780,8 +1860,9 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@Override
public IQuery where(ICriterion<?> theCriterion) {
myCriterion.add((ICriterionInternal) theCriterion);
public IQuery withAnyProfile(Collection theProfileUris) {
Validate.notEmpty(theProfileUris, "theProfileUris must not be null or empty");
myProfiles.add(theProfileUris);
return this;
}
@ -1799,13 +1880,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public IQuery withAnyProfile(Collection<String> theProfileUris) {
Validate.notEmpty(theProfileUris, "theProfileUris must not be null or empty");
myProfiles.add(theProfileUris);
return this;
}
@Override
public IQuery withSecurity(String theSystem, String theCode) {
Validate.notBlank(theCode, "theCode must not be null or empty");
@ -1822,12 +1896,13 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
@SuppressWarnings("rawtypes")
private static class SortInternal implements ISort {
private SortOrderEnum myDirection;
private SearchInternal myFor;
private String myParamName;
private String myParamValue;
private SortOrderEnum myDirection;
public SortInternal(SearchInternal theFor) {
myFor = theFor;
@ -1896,7 +1971,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
}
private final class TransactionExecutable<T> extends BaseClientExecutable<ITransactionTyped<T>, T> implements ITransactionTyped<T> {
private IBaseBundle myBaseBundle;
@ -1932,7 +2006,7 @@ public class GenericClient extends BaseClient implements IGenericClient {
ResourceResponseHandler binding = new ResourceResponseHandler(myBaseBundle.getClass(), getPreferResponseTypes());
BaseHttpClientInvocation invocation = TransactionMethodBinding.createTransactionInvocation(myBaseBundle, myContext);
return (T) invoke(params, binding, invocation);
// } else if (myRawBundle != null) {
// } else if (myRawBundle != null) {
} else {
StringResponseHandler binding = new StringResponseHandler();
/*
@ -1953,7 +2027,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
private final class TransactionInternal implements ITransaction {
@Override
public ITransactionTyped<String> withBundle(String theBundle) {
Validate.notBlank(theBundle, "theBundle must not be null");
@ -1974,149 +2047,19 @@ public class GenericClient extends BaseClient implements IGenericClient {
}
private class PatchInternal extends BaseClientExecutable<IPatchExecutable, MethodOutcome> implements IPatch, IPatchWithBody, IPatchExecutable, IPatchWithQuery, IPatchWithQueryTyped {
private class UpdateInternal extends BaseSearch<IUpdateExecutable, IUpdateWithQueryTyped, MethodOutcome>
implements IUpdate, IUpdateTyped, IUpdateExecutable, IUpdateWithQuery, IUpdateWithQueryTyped {
private CriterionList myCriterionList;
private IIdType myId;
private PreferReturnEnum myPrefer;
private PatchTypeEnum myPatchType;
private String myPatchBody;
private String mySearchUrl;
private String myResourceType;
@Override
public IPatchWithQueryTyped and(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public IPatchWithQuery conditional(String theResourceType) {
Validate.notBlank(theResourceType, "theResourceType must not be null");
myResourceType = theResourceType;
myCriterionList = new CriterionList();
return this;
}
// TODO: This is not longer used.. Deprecate it or just remove it?
@Override
public IPatchWithBody conditionalByUrl(String theSearchUrl) {
mySearchUrl = validateAndEscapeConditionalUrl(theSearchUrl);
return this;
}
@Override
public MethodOutcome execute() {
if (myPatchType == null) {
throw new InvalidRequestException("No patch type supplied, cannot invoke server");
}
if (myPatchBody == null) {
throw new InvalidRequestException("No patch body supplied, cannot invoke server");
}
BaseHttpClientInvocation invocation;
if (isNotBlank(mySearchUrl)) {
invocation = MethodUtil.createPatchInvocation(myContext, mySearchUrl, myPatchType, myPatchBody);
} else if (myCriterionList != null) {
invocation = MethodUtil.createPatchInvocation(myContext, myPatchType, myPatchBody, myResourceType, myCriterionList.toParamList());
} else {
if (myId == null || myId.hasIdPart() == false) {
throw new InvalidRequestException("No ID supplied for resource to patch, can not invoke server");
}
invocation = MethodUtil.createPatchInvocation(myContext, myId, myPatchType, myPatchBody);
}
addPreferHeader(myPrefer, invocation);
OutcomeResponseHandler binding = new OutcomeResponseHandler(myPrefer);
Map<String, List<String>> params = new HashMap<String, List<String>>();
return invoke(params, binding, invocation);
}
@Override
public IPatchExecutable prefer(PreferReturnEnum theReturn) {
myPrefer = theReturn;
return this;
}
@Override
public IPatchWithQueryTyped where(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public IPatchExecutable withId(IIdType theId) {
if (theId == null) {
throw new NullPointerException("theId can not be null");
}
if (theId.hasIdPart() == false) {
throw new NullPointerException("theId must not be blank and must contain an ID, found: " + theId.getValue());
}
myId = theId;
return this;
}
@Override
public IPatchExecutable withId(String theId) {
if (theId == null) {
throw new NullPointerException("theId can not be null");
}
if (isBlank(theId)) {
throw new NullPointerException("theId must not be blank and must contain an ID, found: " + theId);
}
myId = new IdDt(theId);
return this;
}
@Override
public IPatchWithBody withBody(String thePatchBody) {
Validate.notBlank(thePatchBody, "thePatchBody must not be blank");
myPatchBody = thePatchBody;
EncodingEnum encoding = EncodingEnum.detectEncodingNoDefault(thePatchBody);
if (encoding == EncodingEnum.XML) {
myPatchType = PatchTypeEnum.XML_PATCH;
} else if (encoding == EncodingEnum.JSON) {
myPatchType = PatchTypeEnum.JSON_PATCH;
} else {
throw new IllegalArgumentException("Unable to determine encoding of patch");
}
return this;
}
@Override
public IPatchWithQuery conditional(Class<? extends IBaseResource> theClass) {
Validate.notNull(theClass, "theClass must not be null");
String resourceType = myContext.getResourceDefinition(theClass).getName();
return conditional(resourceType);
}
}
private class UpdateInternal extends BaseClientExecutable<IUpdateExecutable, MethodOutcome> implements IUpdate, IUpdateTyped, IUpdateExecutable, IUpdateWithQuery, IUpdateWithQueryTyped {
private CriterionList myCriterionList;
private boolean myConditional;
private IIdType myId;
private PreferReturnEnum myPrefer;
private IBaseResource myResource;
private String myResourceBody;
private String mySearchUrl;
@Override
public IUpdateWithQueryTyped and(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public IUpdateWithQuery conditional() {
myCriterionList = new CriterionList();
myConditional = true;
return this;
}
@ -2140,8 +2083,8 @@ public class GenericClient extends BaseClient implements IGenericClient {
BaseHttpClientInvocation invocation;
if (mySearchUrl != null) {
invocation = MethodUtil.createUpdateInvocation(myContext, myResource, myResourceBody, mySearchUrl);
} else if (myCriterionList != null) {
invocation = MethodUtil.createUpdateInvocation(myContext, myResource, myResourceBody, myCriterionList.toParamList());
} else if (myConditional) {
invocation = MethodUtil.createUpdateInvocation(myContext, myResource, myResourceBody, getParamMap());
} else {
if (myId == null) {
myId = myResource.getIdElement();
@ -2182,12 +2125,6 @@ public class GenericClient extends BaseClient implements IGenericClient {
return this;
}
@Override
public IUpdateWithQueryTyped where(ICriterion<?> theCriterion) {
myCriterionList.add((ICriterionInternal) theCriterion);
return this;
}
@Override
public IUpdateExecutable withId(IIdType theId) {
if (theId == null) {

12
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/FhirResourceDaoDstu2.java
View File

@ -13,7 +13,8 @@ import ca.uhn.fhir.context.RuntimeResourceDefinition;
import ca.uhn.fhir.context.RuntimeSearchParam;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.util.DeleteConflict;
import ca.uhn.fhir.model.api.*;
import ca.uhn.fhir.model.api.IResource;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.model.base.composite.BaseResourceReferenceDt;
import ca.uhn.fhir.model.dstu2.resource.OperationOutcome;
import ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum;
@ -22,7 +23,6 @@ import ca.uhn.fhir.rest.api.*;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.*;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.util.CoverageIgnore;
import ca.uhn.fhir.util.FhirTerser;
import ca.uhn.fhir.validation.*;
@ -36,7 +36,7 @@ import ca.uhn.fhir.validation.*;
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
@ -155,12 +155,6 @@ public class FhirResourceDaoDstu2<T extends IResource> extends BaseHapiFhirResou
}
@CoverageIgnore
@Override
public void validateBundle(IValidationContext<Bundle> theContext) {
throw new UnsupportedOperationException();
}
}
}

16
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoDstu3.java
View File

@ -10,7 +10,7 @@ package ca.uhn.fhir.jpa.dao.dstu3;
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
@ -33,19 +33,18 @@ import org.hl7.fhir.instance.model.api.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
import ca.uhn.fhir.context.*;
import ca.uhn.fhir.context.RuntimeResourceDefinition;
import ca.uhn.fhir.context.RuntimeSearchParam;
import ca.uhn.fhir.jpa.dao.BaseHapiFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.util.DeleteConflict;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.model.base.composite.BaseResourceReferenceDt;
import ca.uhn.fhir.rest.api.*;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.*;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.util.CoverageIgnore;
import ca.uhn.fhir.util.FhirTerser;
import ca.uhn.fhir.validation.*;
@ -57,9 +56,6 @@ public class FhirResourceDaoDstu3<T extends IAnyResource> extends BaseHapiFhirRe
@Qualifier("myInstanceValidatorDstu3")
private IValidatorModule myInstanceValidator;
@Autowired
private FhirContext fhirContext;
@Override
protected IBaseOperationOutcome createOperationOutcome(String theSeverity, String theMessage, String theCode) {
OperationOutcome oo = new OperationOutcome();
@ -160,12 +156,6 @@ public class FhirResourceDaoDstu3<T extends IAnyResource> extends BaseHapiFhirRe
myMode = theMode;
}
@CoverageIgnore
@Override
public void validateBundle(IValidationContext<Bundle> theContext) {
throw new UnsupportedOperationException();
}
@Override
public void validateResource(IValidationContext<IBaseResource> theCtx) {
boolean hasId = theCtx.getResource().getIdElement().hasIdPart();

18
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r4/FhirResourceDaoR4.java
View File

@ -24,28 +24,27 @@ import static org.apache.commons.lang3.StringUtils.isNotBlank;
import java.util.*;
import org.hl7.fhir.exceptions.FHIRException;
import org.hl7.fhir.instance.model.api.*;
import org.hl7.fhir.r4.model.IdType;
import org.hl7.fhir.r4.model.OperationOutcome;
import org.hl7.fhir.r4.model.OperationOutcome.IssueSeverity;
import org.hl7.fhir.r4.model.OperationOutcome.OperationOutcomeIssueComponent;
import org.hl7.fhir.exceptions.FHIRException;
import org.hl7.fhir.instance.model.api.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
import ca.uhn.fhir.context.*;
import ca.uhn.fhir.context.RuntimeResourceDefinition;
import ca.uhn.fhir.context.RuntimeSearchParam;
import ca.uhn.fhir.jpa.dao.BaseHapiFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.util.DeleteConflict;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.model.base.composite.BaseResourceReferenceDt;
import ca.uhn.fhir.rest.api.*;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.*;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.util.CoverageIgnore;
import ca.uhn.fhir.util.FhirTerser;
import ca.uhn.fhir.validation.*;
@ -57,9 +56,6 @@ public class FhirResourceDaoR4<T extends IAnyResource> extends BaseHapiFhirResou
@Qualifier("myInstanceValidatorDstu3")
private IValidatorModule myInstanceValidator;
@Autowired
private FhirContext fhirContext;
@Override
protected IBaseOperationOutcome createOperationOutcome(String theSeverity, String theMessage, String theCode) {
OperationOutcome oo = new OperationOutcome();
@ -160,12 +156,6 @@ public class FhirResourceDaoR4<T extends IAnyResource> extends BaseHapiFhirResou
myMode = theMode;
}
@CoverageIgnore
@Override
public void validateBundle(IValidationContext<Bundle> theContext) {
throw new UnsupportedOperationException();
}
@Override
public void validateResource(IValidationContext<IBaseResource> theCtx) {
boolean hasId = theCtx.getResource().getIdElement().hasIdPart();

23
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/BaseJpaResourceProvider.java
View File

@ -10,7 +10,7 @@ package ca.uhn.fhir.jpa.provider;
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
@ -30,7 +30,6 @@ import org.springframework.beans.factory.annotation.Required;
import ca.uhn.fhir.jpa.dao.DaoMethodOutcome;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.model.api.TagList;
import ca.uhn.fhir.rest.annotation.*;
import ca.uhn.fhir.rest.api.PatchTypeEnum;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
@ -95,26 +94,6 @@ public abstract class BaseJpaResourceProvider<T extends IBaseResource> extends B
return myDao.getResourceType();
}
@GetTags
public TagList getTagsForResourceInstance(HttpServletRequest theRequest, @IdParam IIdType theResourceId, RequestDetails theRequestDetails) {
startRequest(theRequest);
try {
return myDao.getTags(theResourceId, theRequestDetails);
} finally {
endRequest(theRequest);
}
}
@GetTags
public TagList getTagsForResourceType(HttpServletRequest theRequest, RequestDetails theRequestDetails) {
startRequest(theRequest);
try {
return myDao.getAllResourceTags(theRequestDetails);
} finally {
endRequest(theRequest);
}
}
@Read(version = true)
public T read(HttpServletRequest theRequest, @IdParam IIdType theId, RequestDetails theRequestDetails) {
startRequest(theRequest);

13
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/BaseJpaSystemProvider.java
View File

@ -10,7 +10,7 @@ package ca.uhn.fhir.jpa.provider;
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
@ -27,7 +27,6 @@ import javax.servlet.http.HttpServletRequest;
import org.springframework.beans.factory.annotation.Required;
import ca.uhn.fhir.jpa.dao.IFhirSystemDao;
import ca.uhn.fhir.model.api.TagList;
import ca.uhn.fhir.rest.annotation.*;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
import ca.uhn.fhir.rest.api.server.RequestDetails;
@ -43,16 +42,6 @@ public class BaseJpaSystemProvider<T, MT> extends BaseJpaProvider {
// nothing
}
@GetTags
public TagList getAllTagsOnServer(HttpServletRequest theRequest, RequestDetails theRequestDetails) {
startRequest(theRequest);
try {
return myDao.getAllTags(theRequestDetails);
} finally {
endRequest(theRequest);
}
}
protected IFhirSystemDao<T, MT> getDao() {
return myDao;
}

185
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/ResourceProviderDstu2Test.java
View File

@ -1,7 +1,23 @@
package ca.uhn.fhir.jpa.provider;
import static org.hamcrest.Matchers.*;
import static org.junit.Assert.*;
import static org.hamcrest.Matchers.contains;
import static org.hamcrest.Matchers.containsInAnyOrder;
import static org.hamcrest.Matchers.containsInRelativeOrder;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.emptyString;
import static org.hamcrest.Matchers.greaterThan;
import static org.hamcrest.Matchers.hasItems;
import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.startsWith;
import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotEquals;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
import java.io.*;
import java.net.*;
@ -34,7 +50,6 @@ import ca.uhn.fhir.model.valueset.BundleTypeEnum;
import ca.uhn.fhir.parser.IParser;
import ca.uhn.fhir.rest.api.*;
import ca.uhn.fhir.rest.client.api.IGenericClient;
import ca.uhn.fhir.rest.gclient.*;
import ca.uhn.fhir.rest.param.*;
import ca.uhn.fhir.rest.server.exceptions.*;
import ca.uhn.fhir.util.*;
@ -457,6 +472,7 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
.forResource(Organization.class)
.where(Organization.NAME.matches().value("rpdstu2_testCountParam_01"))
.count(10)
.returnBundle(Bundle.class)
.execute();
assertEquals(100, found.getTotalElement().getValue().intValue());
assertEquals(10, found.getEntry().size());
@ -466,6 +482,7 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
.forResource(Organization.class)
.where(Organization.NAME.matches().value("rpdstu2_testCountParam_01"))
.count(999)
.returnBundle(Bundle.class)
.execute();
assertEquals(100, found.getTotalElement().getValue().intValue());
assertEquals(50, found.getEntry().size());
@ -704,6 +721,7 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
.where(Encounter.IDENTIFIER.exactly().systemAndCode("urn:foo", "testDeepChainingE1"))
.include(Encounter.INCLUDE_LOCATION.asRecursive())
.include(Location.INCLUDE_PARTOF.asRecursive())
.returnBundle(Bundle.class)
.execute();
assertEquals(3, res.getEntry().size());
@ -1581,15 +1599,6 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
pat = new Patient();
pat.addIdentifier().setSystem("urn:system").setValue("testReadAllInstancesOfType_02");
ourClient.create().resource(pat).prettyPrint().encodedXml().execute().getId();
{
IQuery a = ourClient
.search()
.forResource(Patient.class);
IQueryTyped<Bundle> b = a.returnBundle(Bundle.class);
IClientExecutable<?, ?> x = b.encodedXml();
x.execute();
}
{
Bundle returned = ourClient
.search()
@ -1598,10 +1607,15 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
.encodedXml()
.execute();
assertThat(returned.getEntry().size(), greaterThan(1));
assertEquals(BundleTypeEnum.SEARCHSET, returned.getType().getValueAsEnum());
assertEquals(BundleTypeEnum.SEARCHSET, returned.getTypeElement().getValueAsEnum());
}
{
Bundle returned = ourClient.search().forResource(Patient.class).encodedJson().execute();
Bundle returned = ourClient
.search()
.forResource(Patient.class)
.encodedJson()
.returnBundle(Bundle.class)
.execute();
assertThat(returned.getEntry().size(), greaterThan(1));
}
}
@ -1648,7 +1662,13 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
assertEquals(1, actual.getContained().getContainedResources().size());
assertThat(actual.getText().getDiv().getValueAsString(), containsString("<td>Identifier</td><td>testSaveAndRetrieveWithContained01</td>"));
Bundle b = ourClient.search().forResource("Patient").where(Patient.IDENTIFIER.exactly().systemAndCode("urn:system:rpdstu2", "testSaveAndRetrieveWithContained01")).prettyPrint().execute();
Bundle b = ourClient
.search()
.forResource("Patient")
.where(Patient.IDENTIFIER.exactly().systemAndCode("urn:system:rpdstu2", "testSaveAndRetrieveWithContained01"))
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
assertEquals(1, b.getEntry().size());
}
@ -1714,7 +1734,13 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
p1.addIdentifier().setValue("testSearchByIdentifierWithoutSystem01");
IdDt p1Id = (IdDt) ourClient.create().resource(p1).execute().getId();
Bundle actual = ourClient.search().forResource(Patient.class).where(Patient.IDENTIFIER.exactly().systemAndCode(null, "testSearchByIdentifierWithoutSystem01")).encodedJson().prettyPrint()
Bundle actual = ourClient
.search()
.forResource(Patient.class)
.where(Patient.IDENTIFIER.exactly().systemAndCode(null, "testSearchByIdentifierWithoutSystem01"))
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
assertEquals(1, actual.getEntry().size());
assertEquals(p1Id.getIdPart(), actual.getEntry().get(0).getResource().getId().getIdPart());
@ -1736,14 +1762,13 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
id2 = myPatientDao.create(patient, mySrd).getId().toUnqualifiedVersionless();
}
//@formatter:off
Bundle found = ourClient
.search()
.forResource(Patient.class)
.where(BaseResource.RES_ID.matches().values(id1.getIdPart(), id2.getIdPart()))
.and(BaseResource.RES_ID.matches().value(id1.getIdPart()))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
assertThat(toIdListUnqualifiedVersionless(found), containsInAnyOrder(id1));
}
@ -1761,21 +1786,24 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
p1.setManagingOrganization(new ResourceReferenceDt(o1id.toUnqualifiedVersionless()));
IdDt p1Id = (IdDt) ourClient.create().resource(p1).execute().getId();
//@formatter:off
Bundle actual = ourClient.search()
.forResource(Patient.class)
.where(Patient.ORGANIZATION.hasId(o1id.getIdPart()))
.encodedJson().prettyPrint().execute();
//@formatter:on
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
assertEquals(1, actual.getEntry().size());
assertEquals(p1Id.getIdPart(), actual.getEntry().get(0).getResource().getId().getIdPart());
//@formatter:off
actual = ourClient.search()
actual = ourClient
.search()
.forResource(Patient.class)
.where(Patient.ORGANIZATION.hasId(o1id.getValue()))
.encodedJson().prettyPrint().execute();
//@formatter:on
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
assertEquals(1, actual.getEntry().size());
assertEquals(p1Id.getIdPart(), actual.getEntry().get(0).getResource().getId().getIdPart());
@ -1802,17 +1830,19 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
p2.setManagingOrganization(new ResourceReferenceDt(o2id.toUnqualifiedVersionless()));
IdDt p2Id = (IdDt) ourClient.create().resource(p2).execute().getId();
//@formatter:off
Bundle actual = ourClient.search()
.forResource(Patient.class)
.where(Patient.ORGANIZATION.hasAnyOfIds(Arrays.asList(o1id.getIdPart(), o2id.getIdPart())))
.encodedJson().prettyPrint().execute();
//@formatter:on
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
Set<String> expectedIds = new HashSet<String>();
expectedIds.add(p1Id.getIdPart());
expectedIds.add(p2Id.getIdPart());
Set<String> actualIds = new HashSet<String>();
for (BundleEntry ele : actual.getEntry()) {
for (Entry ele : actual.getEntry()) {
actualIds.add(ele.getResource().getId().getIdPart());
}
assertEquals("Expects to retrieve the 2 patients which reference the two different organizations", expectedIds, actualIds);
@ -1828,40 +1858,49 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
o2.setName("testSearchByResourceChainName02");
o2.getMeta().addProfile("http://profile1").addProfile("http://profile3");
IdDt o2id = (IdDt) ourClient.create().resource(o2).execute().getId().toUnqualifiedVersionless();
//@formatter:off
Bundle actual = ourClient.search()
.forResource(Organization.class)
.withProfile("http://profile1")
.withProfile("http://profileX")
.encodedJson().prettyPrint().execute();
//@formatter:on
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
assertEquals("nothing matches profile x", Collections.emptyList(), actual.getEntry());
//@formatter:off
actual = ourClient.search()
.forResource(Organization.class)
.withProfile("http://profile1")
.withProfile("http://profile2")
.encodedJson().prettyPrint().execute();
//@formatter:on
.returnBundle(Bundle.class)
.encodedJson()
.prettyPrint()
.execute();
Set<String> expectedIds = new HashSet<String>();
expectedIds.add(o1id.getIdPart());
Set<String> actualIds = new HashSet<String>();
for (BundleEntry ele : actual.getEntry()) {
for (Entry ele : actual.getEntry()) {
actualIds.add(ele.getResource().getId().getIdPart());
}
assertEquals("Expects to retrieve the 1 orgination matching on Org1's profiles", expectedIds, actualIds);
//@formatter:off
actual = ourClient.search()
.forResource(Organization.class)
.withProfile("http://profile1")
.withAnyProfile(Arrays.asList("http://profile3", "http://profile2"))
.encodedJson().prettyPrint().execute();
//@formatter:on
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
expectedIds = new HashSet<String>();
expectedIds.add(o1id.getIdPart());
expectedIds.add(o2id.getIdPart());
actualIds = new HashSet<String>();
for (BundleEntry ele : actual.getEntry()) {
for (Entry ele : actual.getEntry()) {
actualIds.add(ele.getResource().getId().getIdPart());
}
assertEquals("Expects to retrieve the 2 orginations, since we match on (the common profile AND (Org1's second profile OR org2's second profile))", expectedIds, actualIds);
@ -1905,60 +1944,58 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
ourLog.info("Before: {}", beforeAny.getValue());
{
//@formatter:off
Bundle found = ourClient.search()
Bundle found = ourClient
.search()
.forResource(Patient.class)
.where(Patient.NAME.matches().value("testSearchLastUpdatedParamRp"))
.lastUpdated(new DateRangeParam(beforeAny, null))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<IdDt> patients = toIdListUnqualifiedVersionless(found);
assertThat(patients, hasItems(id1a, id1b, id2));
}
{
//@formatter:off
Bundle found = ourClient.search()
.forResource(Patient.class)
.where(Patient.NAME.matches().value("testSearchLastUpdatedParamRp"))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<IdDt> patients = toIdListUnqualifiedVersionless(found);
assertThat(patients, hasItems(id1a, id1b, id2));
}
{
//@formatter:off
Bundle found = ourClient.search()
.forResource(Patient.class)
.where(Patient.NAME.matches().value("testSearchLastUpdatedParamRp"))
.lastUpdated(new DateRangeParam(beforeR2, null))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<IdDt> patients = toIdListUnqualifiedVersionless(found);
assertThat(patients, hasItems(id2));
assertThat(patients, not(hasItems(id1a, id1b)));
}
{
//@formatter:off
Bundle found = ourClient.search()
.forResource(Patient.class)
.where(Patient.NAME.matches().value("testSearchLastUpdatedParamRp"))
.lastUpdated(new DateRangeParam(beforeAny, beforeR2))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<IdDt> patients = toIdListUnqualifiedVersionless(found);
assertThat(patients.toString(), patients, not(hasItems(id2)));
assertThat(patients.toString(), patients, (hasItems(id1a, id1b)));
}
{
//@formatter:off
Bundle found = ourClient.search()
.forResource(Patient.class)
.where(Patient.NAME.matches().value("testSearchLastUpdatedParamRp"))
.lastUpdated(new DateRangeParam(null, beforeR2))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<IdDt> patients = toIdListUnqualifiedVersionless(found);
assertThat(patients, (hasItems(id1a, id1b)));
assertThat(patients, not(hasItems(id2)));
@ -1985,14 +2022,12 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
Date before = new Date();
Thread.sleep(100);
//@formatter:off
ca.uhn.fhir.model.dstu2.resource.Bundle found = ourClient
.search()
.forResource(Patient.class)
.prettyPrint()
.returnBundle(ca.uhn.fhir.model.dstu2.resource.Bundle.class)
.execute();
//@formatter:on
Thread.sleep(100);
Date after = new Date();
@ -2018,23 +2053,22 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
pat.getManagingOrganization().setReference(orgId.toUnqualifiedVersionless());
ourClient.create().resource(pat).prettyPrint().encodedXml().execute().getId();
//@formatter:off
Bundle found = ourClient
.search()
.forResource(Patient.class)
.where(Patient.IDENTIFIER.exactly().systemAndIdentifier("urn:system:rpdstu2","testSearchWithInclude02"))
.include(Patient.INCLUDE_ORGANIZATION)
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
//@formatter:on
assertEquals(2, found.getEntry().size());
assertEquals(Patient.class, found.getEntry().get(0).getResource().getClass());
assertEquals(BundleEntrySearchModeEnum.MATCH, found.getEntry().get(0).getSearchMode().getValueAsEnum());
assertEquals(BundleEntrySearchModeEnum.MATCH, found.getEntry().get(0).getSearch().getModeElement().getValueAsEnum());
assertEquals(BundleEntrySearchModeEnum.MATCH, found.getEntry().get(0).getResource().getResourceMetadata().get(ResourceMetadataKeyEnum.ENTRY_SEARCH_MODE));
assertThat(found.getEntry().get(0).getResource().getText().getDiv().getValueAsString(), containsString("<table class=\"hapiPropertyTable"));
assertEquals(Organization.class, found.getEntry().get(1).getResource().getClass());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, found.getEntry().get(1).getSearchMode().getValueAsEnum());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, found.getEntry().get(1).getSearch().getModeElement().getValueAsEnum());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, found.getEntry().get(1).getResource().getResourceMetadata().get(ResourceMetadataKeyEnum.ENTRY_SEARCH_MODE));
}
@ -2043,14 +2077,12 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
Observation o = new Observation();
o.getCode().setText("testSearchWithInvalidSort");
myObservationDao.create(o, mySrd);
//@formatter:off
ourClient
.search()
.forResource(Observation.class)
.sort().ascending(Observation.CODE_VALUE_QUANTITY) // composite sort not supported yet
.prettyPrint()
.execute();
//@formatter:on
}
@Test
@ -2086,15 +2118,14 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
IdDt orgMissing = (IdDt) ourClient.create().resource(org).prettyPrint().encodedXml().execute().getId().toUnqualifiedVersionless();
{
//@formatter:off
Bundle found = ourClient
.search()
.forResource(Organization.class)
.where(Organization.NAME.isMissing(false))
.count(100)
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<IdDt> list = toIdListUnqualifiedVersionless(found);
ourLog.info(methodName + ": " + list.toString());
@ -2104,15 +2135,14 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
assertThat(list, not(containsInRelativeOrder(orgMissing)));
}
//@formatter:off
Bundle found = ourClient
.search()
.forResource(Organization.class)
.where(Organization.NAME.isMissing(true))
.count(100)
.prettyPrint()
.execute();
//@formatter:on
Bundle found = ourClient
.search()
.forResource(Organization.class)
.where(Organization.NAME.isMissing(true))
.count(100)
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
List<IdDt> list = toIdListUnqualifiedVersionless(found);
ourLog.info(methodName + " found: " + list.toString() + " - Wanted " + orgMissing + " but not " + orgNotMissing);
@ -2236,7 +2266,6 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
p.addName().addGiven("Sarah").addFamily("Graham");
ourClient.create().resource(p).execute();
//@formatter:off
Bundle resp = ourClient
.search()
.forResource(Patient.class)
@ -2244,14 +2273,13 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
.sort().ascending(Patient.FAMILY)
.sort().ascending(Patient.GIVEN)
.count(100)
.returnBundle(Bundle.class)
.execute();
//@formatter:on
List<String> names = toNameList(resp);
ourLog.info(StringUtils.join(names, '\n'));
//@formatter:off
assertThat(names, contains( // this matches in order only
"Daniel Adams",
"Aaron Alexis",
@ -2269,7 +2297,6 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
"Brian Gracia",
"Sarah Graham",
"Stephan Graham"));
//@formatter:om
}
@ -2474,7 +2501,15 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
assertThat(p1Id.getValue(), containsString("Patient/testUpdateWithClientSuppliedIdWhichDoesntExistRpDstu2/_history"));
Bundle actual = ourClient.search().forResource(Patient.class).where(Patient.IDENTIFIER.exactly().systemAndCode("urn:system", "testUpdateWithClientSuppliedIdWhichDoesntExistRpDstu2")).encodedJson().prettyPrint().execute();
Bundle actual = ourClient
.search()
.forResource(Patient.class)
.where(Patient.IDENTIFIER.exactly().systemAndCode("urn:system", "testUpdateWithClientSuppliedIdWhichDoesntExistRpDstu2"))
.encodedJson()
.prettyPrint()
.returnBundle(Bundle.class)
.execute();
assertEquals(1, actual.getEntry().size());
assertEquals(p1Id.getIdPart(), actual.getEntry().get(0).getResource().getId().getIdPart());

23
hapi-fhir-structures-dstu/src/test/java/ca/uhn/fhir/rest/server/InterceptorTest.java
View File

@ -1,12 +1,13 @@
package ca.uhn.fhir.rest.server;
import static org.mockito.Matchers.*;
import static org.mockito.Mockito.*;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.inOrder;
import static org.mockito.Mockito.mock;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verifyNoMoreInteractions;
import static org.mockito.Mockito.when;
import java.util.Collections;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.*;
import java.util.concurrent.TimeUnit;
import javax.servlet.http.HttpServletRequest;
@ -21,10 +22,7 @@ import org.apache.http.impl.conn.PoolingHttpClientConnectionManager;
import org.eclipse.jetty.server.Server;
import org.eclipse.jetty.servlet.ServletHandler;
import org.eclipse.jetty.servlet.ServletHolder;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.BeforeClass;
import org.junit.Test;
import org.junit.*;
import org.mockito.InOrder;
import ca.uhn.fhir.context.FhirContext;
@ -35,10 +33,7 @@ import ca.uhn.fhir.model.dstu.resource.Patient;
import ca.uhn.fhir.model.dstu.valueset.IdentifierUseEnum;
import ca.uhn.fhir.model.primitive.IdDt;
import ca.uhn.fhir.model.primitive.UriDt;
import ca.uhn.fhir.rest.annotation.IdParam;
import ca.uhn.fhir.rest.annotation.Read;
import ca.uhn.fhir.rest.annotation.RequiredParam;
import ca.uhn.fhir.rest.annotation.Search;
import ca.uhn.fhir.rest.annotation.*;
import ca.uhn.fhir.rest.api.RestOperationTypeEnum;
import ca.uhn.fhir.rest.method.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;

700
hapi-fhir-structures-dstu/src/test/java/ca/uhn/fhir/rest/server/SearchSearchServerDstu1Test.java
View File

@ -1,700 +0,0 @@
package ca.uhn.fhir.rest.server;
import static ca.uhn.fhir.util.UrlUtil.escape;
import static org.hamcrest.Matchers.containsInAnyOrder;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.startsWith;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.assertTrue;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
import java.util.concurrent.TimeUnit;
import org.apache.commons.io.IOUtils;
import org.apache.http.HttpEntity;
import org.apache.http.HttpResponse;
import org.apache.http.NameValuePair;
import org.apache.http.client.entity.UrlEncodedFormEntity;
import org.apache.http.client.methods.CloseableHttpResponse;
import org.apache.http.client.methods.HttpGet;
import org.apache.http.client.methods.HttpPost;
import org.apache.http.entity.ByteArrayEntity;
import org.apache.http.impl.client.CloseableHttpClient;
import org.apache.http.impl.client.HttpClientBuilder;
import org.apache.http.impl.conn.PoolingHttpClientConnectionManager;
import org.apache.http.message.BasicNameValuePair;
import org.eclipse.jetty.server.Server;
import org.eclipse.jetty.servlet.ServletHandler;
import org.eclipse.jetty.servlet.ServletHolder;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.BeforeClass;
import org.junit.Test;
import com.google.common.net.UrlEscapers;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.IResource;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.model.api.ResourceMetadataKeyEnum;
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
import ca.uhn.fhir.model.dstu.composite.CodingDt;
import ca.uhn.fhir.model.dstu.resource.BaseResource;
import ca.uhn.fhir.model.dstu.resource.Observation;
import ca.uhn.fhir.model.dstu.resource.Patient;
import ca.uhn.fhir.model.primitive.IdDt;
import ca.uhn.fhir.narrative.DefaultThymeleafNarrativeGenerator;
import ca.uhn.fhir.rest.annotation.Create;
import ca.uhn.fhir.rest.annotation.IdParam;
import ca.uhn.fhir.rest.annotation.IncludeParam;
import ca.uhn.fhir.rest.annotation.OptionalParam;
import ca.uhn.fhir.rest.annotation.RequiredParam;
import ca.uhn.fhir.rest.annotation.ResourceParam;
import ca.uhn.fhir.rest.annotation.Search;
import ca.uhn.fhir.rest.api.MethodOutcome;
import ca.uhn.fhir.rest.client.IGenericClient;
import ca.uhn.fhir.rest.param.ReferenceParam;
import ca.uhn.fhir.rest.param.StringAndListParam;
import ca.uhn.fhir.rest.param.StringOrListParam;
import ca.uhn.fhir.rest.param.StringParam;
import ca.uhn.fhir.rest.param.TokenOrListParam;
import ca.uhn.fhir.rest.param.TokenParam;
import ca.uhn.fhir.util.PortUtil;
import ca.uhn.fhir.util.TestUtil;
public class SearchSearchServerDstu1Test {
private static CloseableHttpClient ourClient;
private static FhirContext ourCtx = FhirContext.forDstu1();
private static IServerAddressStrategy ourDefaultAddressStrategy;
private static StringAndListParam ourLastAndList;
private static Set<Include> ourLastIncludes;
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(SearchSearchServerDstu1Test.class);
private static int ourPort;
private static Server ourServer;
private static RestfulServer ourServlet;
@Before
public void before() {
ourServlet.setServerAddressStrategy(ourDefaultAddressStrategy);
ourLastIncludes = null;
ourLastAndList = null;
}
@Test
public void testEncodeConvertsReferencesToRelative() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchWithRef");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
Patient patient = (Patient) ourCtx.newXmlParser().parseBundle(responseContent).getEntries().get(0).getResource();
String ref = patient.getManagingOrganization().getReference().getValue();
assertEquals("Organization/555", ref);
}
/**
* Try loading the page as a POST just to make sure we get the right error
*/
@Test
public void testGetPagesWithPost() throws Exception {
HttpPost httpPost = new HttpPost("http://localhost:" + ourPort);
List<? extends NameValuePair> parameters = Collections.singletonList(new BasicNameValuePair("_getpages", "AAA"));
httpPost.setEntity(new UrlEncodedFormEntity(parameters));
CloseableHttpResponse status = ourClient.execute(httpPost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(400, status.getStatusLine().getStatusCode());
// assertThat(responseContent, containsString("Requests for _getpages must use HTTP GET"));
}
@Test
public void testOmitEmptyOptionalParam() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_id=");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals(null, p.getNameFirstRep().getFamilyFirstRep().getValue());
}
@Test
public void testParseEscapedValues() throws Exception {
StringBuilder b = new StringBuilder();
b.append("http://localhost:");
b.append(ourPort);
b.append("/Patient?");
b.append(escape("findPatientWithAndList")).append('=').append(escape("NE\\,NE,NE\\,NE")).append('&');
b.append(escape("findPatientWithAndList")).append('=').append(escape("NE\\\\NE")).append('&');
b.append(escape("findPatientWithAndList:exact")).append('=').append(escape("E\\$E")).append('&');
b.append(escape("findPatientWithAndList:exact")).append('=').append(escape("E\\|E")).append('&');
HttpGet httpGet = new HttpGet(b.toString());
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals(4, ourLastAndList.getValuesAsQueryTokens().size());
assertEquals(2, ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().size());
assertFalse(ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().get(0).isExact());
assertEquals("NE,NE", ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().get(0).getValue());
assertEquals("NE,NE", ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().get(1).getValue());
assertEquals("NE\\NE", ourLastAndList.getValuesAsQueryTokens().get(1).getValuesAsQueryTokens().get(0).getValue());
assertTrue(ourLastAndList.getValuesAsQueryTokens().get(2).getValuesAsQueryTokens().get(0).isExact());
assertEquals("E$E", ourLastAndList.getValuesAsQueryTokens().get(2).getValuesAsQueryTokens().get(0).getValue());
assertEquals("E|E", ourLastAndList.getValuesAsQueryTokens().get(3).getValuesAsQueryTokens().get(0).getValue());
}
@Test
public void testReturnLinks() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=findWithLinks");
CloseableHttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(10, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue().getValue());
assertEquals("http://foo/Patient?_id=1", bundle.getEntries().get(0).getLinkSearch().getValue());
assertEquals("http://localhost:" + ourPort + "/Patient/99881", bundle.getEntries().get(0).getLinkAlternate().getValue());
assertEquals("http://foo/Patient?_id=1", ResourceMetadataKeyEnum.LINK_SEARCH.get(p));
assertEquals("http://localhost:" + ourPort + "/Patient/99881", ResourceMetadataKeyEnum.LINK_ALTERNATE.get(p));
}
/**
* #149
*/
@Test
public void testReturnLinksWithAddressStrategy() throws Exception {
ourServlet.setServerAddressStrategy(new HardcodedServerAddressStrategy("https://blah.com/base"));
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=findWithLinks");
CloseableHttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
ourLog.info(responseContent);
assertEquals(10, bundle.getEntries().size());
assertEquals("https://blah.com/base", bundle.getLinkBase().getValue());
assertEquals("https://blah.com/base/Patient?_query=findWithLinks", bundle.getLinkSelf().getValue());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue().getValue());
assertEquals("http://foo/Patient?_id=1", bundle.getEntries().get(0).getLinkSearch().getValue());
assertEquals("https://blah.com/base/Patient/99881", bundle.getEntries().get(0).getLinkAlternate().getValue());
assertEquals("http://foo/Patient?_id=1", ResourceMetadataKeyEnum.LINK_SEARCH.get(p));
assertEquals("https://blah.com/base/Patient/99881", ResourceMetadataKeyEnum.LINK_ALTERNATE.get(p));
String linkNext = bundle.getLinkNext().getValue();
ourLog.info(linkNext);
assertThat(linkNext, startsWith("https://blah.com/base?_getpages="));
/*
* Load the second page
*/
String urlPart = linkNext.substring(linkNext.indexOf('?'));
String link = "http://localhost:" + ourPort + urlPart;
httpGet = new HttpGet(link);
status = ourClient.execute(httpGet);
responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
bundle = ourCtx.newXmlParser().parseBundle(responseContent);
ourLog.info(responseContent);
assertEquals(10, bundle.getEntries().size());
assertEquals("https://blah.com/base", bundle.getLinkBase().getValue());
assertEquals(linkNext, bundle.getLinkSelf().getValue());
p = bundle.getResources(Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue().getValue());
assertEquals("http://foo/Patient?_id=11", bundle.getEntries().get(0).getLinkSearch().getValue());
assertEquals("https://blah.com/base/Patient/998811", bundle.getEntries().get(0).getLinkAlternate().getValue());
assertEquals("http://foo/Patient?_id=11", ResourceMetadataKeyEnum.LINK_SEARCH.get(p));
assertEquals("https://blah.com/base/Patient/998811", ResourceMetadataKeyEnum.LINK_ALTERNATE.get(p));
}
@Test
public void testSearchById() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_id=aaa");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamilyAsSingleString());
}
@Test
public void testSearchByIdUsingClient() throws Exception {
IGenericClient client = ourCtx.newRestfulGenericClient("http://localhost:" + ourPort);
Bundle bundle = client.search().forResource("Patient").where(BaseResource.RES_ID.matches().value("aaa")).execute();
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamilyAsSingleString());
}
@Test
public void testSearchByPost() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient/_search");
// add parameters to the post method
List<NameValuePair> parameters = new ArrayList<NameValuePair>();
parameters.add(new BasicNameValuePair("_id", "aaa"));
UrlEncodedFormEntity sendentity = new UrlEncodedFormEntity(parameters, "UTF-8");
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamilyAsSingleString());
}
/**
* See #164
*/
@Test
public void testSearchByPostWithInvalidPostUrl() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient?name=Central"); // should end with
// _search
// add parameters to the post method
List<NameValuePair> parameters = new ArrayList<NameValuePair>();
parameters.add(new BasicNameValuePair("_id", "aaa"));
UrlEncodedFormEntity sendentity = new UrlEncodedFormEntity(parameters, "UTF-8");
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(400, status.getStatusLine().getStatusCode());
assertThat(responseContent, containsString("<details value=\"Incorrect Content-Type header value of &quot;application/x-www-form-urlencoded; charset=UTF-8&quot; was provided in the request. A FHIR Content-Type is required for &quot;CREATE&quot; operation\"/>"));
}
/**
* See #164
*/
@Test
public void testSearchByPostWithMissingContentType() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient?name=Central"); // should end with
// _search
HttpEntity sendentity = new ByteArrayEntity(new byte[] { 1, 2, 3, 4 });
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(400, status.getStatusLine().getStatusCode());
assertThat(responseContent, containsString("<details value=\"No Content-Type header was provided in the request. This is required for &quot;CREATE&quot; operation\"/>"));
}
/**
* See #164
*/
@Test
public void testSearchByPostWithParamsInBodyAndUrl() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient/_search?name=Central");
// add parameters to the post method
List<NameValuePair> parameters = new ArrayList<NameValuePair>();
parameters.add(new BasicNameValuePair("_id", "aaa"));
UrlEncodedFormEntity sendentity = new UrlEncodedFormEntity(parameters, "UTF-8");
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("idaaa", p.getName().get(0).getFamilyAsSingleString());
assertEquals("nameCentral", p.getName().get(1).getFamilyAsSingleString());
}
@Test
public void testSearchCompartment() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient/123/fooCompartment");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
ourLog.info(responseContent);
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("fooCompartment", p.getIdentifierFirstRep().getValue().getValue());
assertThat(bundle.getEntries().get(0).getResource().getId().getValue(), containsString("Patient/123"));
}
@Test
public void testSearchGetWithUnderscoreSearch() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Observation/_search?subject%3APatient=100&name=3141-9%2C8302-2%2C8287-5%2C39156-5");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Observation p = bundle.getResources(Observation.class).get(0);
assertEquals("Patient/100", p.getSubject().getReference().toString());
assertEquals(4, p.getName().getCoding().size());
assertEquals("3141-9", p.getName().getCoding().get(0).getCode().getValue());
assertEquals("8302-2", p.getName().getCoding().get(1).getCode().getValue());
}
@Test
public void testSearchIncludesParametersIncludes() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchIncludes&_include=foo&_include:recurse=bar");
CloseableHttpResponse status = ourClient.execute(httpGet);
IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals(2, ourLastIncludes.size());
assertThat(ourLastIncludes, containsInAnyOrder(new Include("foo", false), new Include("bar", true)));
}
@Test
public void testSearchIncludesParametersIncludesList() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchIncludesList&_include=foo&_include:recurse=bar");
CloseableHttpResponse status = ourClient.execute(httpGet);
IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals(2, ourLastIncludes.size());
assertThat(ourLastIncludes, containsInAnyOrder(new Include("foo", false), new Include("bar", true)));
}
@Test
public void testSearchIncludesParametersNone() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchIncludes");
CloseableHttpResponse status = ourClient.execute(httpGet);
IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
assertThat(ourLastIncludes, empty());
}
@Test
public void testSearchWithOrList() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?findPatientWithOrList=aaa,bbb");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("aaa", p.getIdentifier().get(0).getValue().getValue());
assertEquals("bbb", p.getIdentifier().get(1).getValue().getValue());
}
@Test
public void testSearchWithTokenParameter() throws Exception {
String token = UrlEscapers.urlFragmentEscaper().asFunction().apply("http://www.dmix.gov/vista/2957|301");
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?tokenParam=" + token);
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("http://www.dmix.gov/vista/2957", p.getNameFirstRep().getFamilyAsSingleString());
assertEquals("301", p.getNameFirstRep().getGivenAsSingleString());
}
@Test
public void testSpecificallyNamedQueryGetsPrecedence() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?AAA=123");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("AAA", p.getIdentifierFirstRep().getValue().getValue());
// Now the named query
httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=findPatientByAAA&AAA=123");
status = ourClient.execute(httpGet);
responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
p = bundle.getResources(Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue().getValue());
}
@AfterClass
public static void afterClassClearContext() throws Exception {
ourServer.stop();
TestUtil.clearAllStaticFieldsForUnitTest();
}
@BeforeClass
public static void beforeClass() throws Exception {
ourPort = PortUtil.findFreePort();
ourServer = new Server(ourPort);
DummyPatientResourceProvider patientProvider = new DummyPatientResourceProvider();
ServletHandler proxyHandler = new ServletHandler();
ourServlet = new RestfulServer();
ourServlet.getFhirContext().setNarrativeGenerator(new DefaultThymeleafNarrativeGenerator());
ourServlet.setPagingProvider(new FifoMemoryPagingProvider(10).setDefaultPageSize(10));
ourServlet.setResourceProviders(patientProvider, new DummyObservationResourceProvider());
ServletHolder servletHolder = new ServletHolder(ourServlet);
proxyHandler.addServletWithMapping(servletHolder, "/*");
ourServer.setHandler(proxyHandler);
ourServer.start();
PoolingHttpClientConnectionManager connectionManager = new PoolingHttpClientConnectionManager(5000, TimeUnit.MILLISECONDS);
HttpClientBuilder builder = HttpClientBuilder.create();
builder.setConnectionManager(connectionManager);
ourClient = builder.build();
ourDefaultAddressStrategy = ourServlet.getServerAddressStrategy();
}
public static class DummyObservationResourceProvider implements IResourceProvider {
@Override
public Class<? extends IResource> getResourceType() {
return Observation.class;
}
@Search
public Observation search(@RequiredParam(name = "subject") ReferenceParam theSubject, @RequiredParam(name = "name") TokenOrListParam theName) {
Observation o = new Observation();
o.setId("1");
o.getSubject().setReference(theSubject.getResourceType() + "/" + theSubject.getIdPart());
for (BaseCodingDt next : theName.getListAsCodings()) {
o.getName().getCoding().add(new CodingDt(next));
}
return o;
}
}
public static class DummyPatientResourceProvider implements IResourceProvider {
@Search(compartmentName = "fooCompartment")
public List<Patient> compartment(@IdParam IdDt theId) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId(theId);
patient.addIdentifier("system", "fooCompartment");
retVal.add(patient);
return retVal;
}
/**
* Only needed for #164
*/
@Create
public MethodOutcome create(@ResourceParam Patient thePatient) {
throw new IllegalArgumentException();
}
@Search
public List<Patient> findPatient(@RequiredParam(name = "_id") StringParam theParam, @OptionalParam(name = "name") StringParam theName) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addIdentifier("system", "identifier123");
if (theParam != null) {
patient.addName().addFamily("id" + theParam.getValue());
if (theName != null) {
patient.addName().addFamily("name" + theName.getValue());
}
}
retVal.add(patient);
return retVal;
}
@Search
public List<Patient> findPatientByAAA01(@RequiredParam(name = "AAA") StringParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addIdentifier("system", "AAA");
retVal.add(patient);
return retVal;
}
@Search(queryName = "findPatientByAAA")
public List<Patient> findPatientByAAA02Named(@OptionalParam(name = "AAA") StringParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addIdentifier("system", "AAANamed");
retVal.add(patient);
return retVal;
}
@Search()
public List<Patient> findPatientWithAndList(@RequiredParam(name = "findPatientWithAndList") StringAndListParam theParam) {
ourLastAndList = theParam;
ArrayList<Patient> retVal = new ArrayList<Patient>();
return retVal;
}
@Search()
public List<Patient> findPatientWithOrList(@RequiredParam(name = "findPatientWithOrList") StringOrListParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
for (StringParam next : theParam.getValuesAsQueryTokens()) {
patient.addIdentifier("system", next.getValue());
}
retVal.add(patient);
return retVal;
}
@Search()
public List<Patient> findPatientWithToken(@RequiredParam(name = "tokenParam") TokenParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addName().addFamily(theParam.getSystem()).addGiven(theParam.getValue());
retVal.add(patient);
return retVal;
}
@Search(queryName = "findWithLinks")
public List<Patient> findWithLinks() {
ArrayList<Patient> retVal = new ArrayList<Patient>();
for (int i = 1; i <= 20; i++) {
Patient patient = new Patient();
patient.setId("" + i);
patient.addIdentifier("system", "AAANamed");
ResourceMetadataKeyEnum.LINK_SEARCH.put(patient, ("http://foo/Patient?_id=" + i));
ResourceMetadataKeyEnum.LINK_ALTERNATE.put(patient, ("Patient/9988" + i));
retVal.add(patient);
}
return retVal;
}
@Override
public Class<? extends IResource> getResourceType() {
return Patient.class;
}
@Search(queryName = "searchIncludes")
public List<Patient> searchIncludes(@IncludeParam Set<Include> theIncludes) {
ourLastIncludes = theIncludes;
ArrayList<Patient> retVal = new ArrayList<Patient>();
return retVal;
}
@Search(queryName = "searchIncludesList")
public List<Patient> searchIncludesList(@IncludeParam List<Include> theIncludes) {
if (theIncludes != null) {
ourLastIncludes = new HashSet<Include>(theIncludes);
}
ArrayList<Patient> retVal = new ArrayList<Patient>();
return retVal;
}
@Search(queryName = "searchWithRef")
public Patient searchWithRef() {
Patient patient = new Patient();
patient.setId("Patient/1/_history/1");
patient.getManagingOrganization().setReference("http://localhost:" + ourPort + "/Organization/555/_history/666");
return patient;
}
}
}

5
hapi-fhir-structures-dstu2.1/src/main/java/org/hl7/fhir/dstu2016may/hapi/rest/server/Dstu2_1BundleFactory.java
View File

@ -265,11 +265,6 @@ public class Dstu2_1BundleFactory implements IVersionSpecificBundleFactory {
}
}
@Override
public ca.uhn.fhir.model.api.Bundle getDstu1Bundle() {
return null;
}
@Override
public IBaseResource getResourceBundle() {
return myBundle;

612
hapi-fhir-structures-dstu2.1/src/test/java/ca/uhn/fhir/rest/client/GenericClientDstu2_1Test.java
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5
hapi-fhir-structures-dstu2/src/main/java/ca/uhn/fhir/rest/server/provider/dstu2/Dstu2BundleFactory.java
View File

@ -258,11 +258,6 @@ public class Dstu2BundleFactory implements IVersionSpecificBundleFactory {
}
}
@Override
public ca.uhn.fhir.model.api.Bundle getDstu1Bundle() {
return null;
}
@Override
public IResource getResourceBundle() {
return myBundle;

163
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/parser/JsonParserDstu2Test.java
View File

@ -36,7 +36,6 @@ import com.google.common.collect.Sets;
import ca.uhn.fhir.context.ConfigurationException;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.*;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
import ca.uhn.fhir.model.dstu2.composite.*;
import ca.uhn.fhir.model.dstu2.resource.*;
@ -145,21 +144,6 @@ public class JsonParserDstu2Test {
assertEquals("ORG", o.getName());
}
@Test
public void testEncodeBundleOldStyleContainingResourceWithUuidBase() {
Patient p = new Patient();
p.setId(IdDt.newRandomUuid());
p.addName().addFamily("PATIENT");
Bundle b = new Bundle();
b.addEntry().setResource(p);
String encoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeBundleToString(b);
ourLog.info(encoded);
assertThat(encoded, stringContainsInOrder("fullUrl", p.getId().getValue(), "Patient"));
}
/**
* See #308
*/
@ -536,43 +520,6 @@ public class JsonParserDstu2Test {
}
@Test
public void testEncodeBundleOldBundleNoText() {
Bundle b = new Bundle();
BundleEntry e = b.addEntry();
e.setResource(new Patient());
b.addCategory("scheme", "term", "label");
String val = ourCtx.newJsonParser().setPrettyPrint(false).encodeBundleToString(b);
ourLog.info(val);
assertThat(val, not(containsString("text")));
b = ourCtx.newJsonParser().parseBundle(val);
assertEquals(1, b.getEntries().size());
}
/**
* Fixing #89
*/
@Test
public void testEncodeBundleWithDeletedEntry() throws ConfigurationException, DataFormatException, IOException {
Bundle b = ourCtx.newXmlParser().parseBundle(IOUtils.toString(JsonParserDstu2Test.class.getResourceAsStream("/xml-bundle.xml")));
String val = ourCtx.newJsonParser().encodeBundleToString(b);
ourLog.info(val);
//@formatter:off
assertThat(val, containsString("\"deleted\":{" +
"\"type\":\"Patient\"," +
"\"resourceId\":\"4384\"," +
"\"instant\":\"2015-01-15T11:04:43.054-05:00\"" +
"}"));
//@formatter:on
}
@Test
public void testEncodeDoesntIncludeUuidId() {
@ -1055,28 +1002,28 @@ public class JsonParserDstu2Test {
public void testParseAndEncodeBundle() throws Exception {
String content = IOUtils.toString(JsonParserDstu2Test.class.getResourceAsStream("/bundle-example.json"));
Bundle parsed = ourCtx.newJsonParser().parseBundle(content);
Bundle parsed = ourCtx.newJsonParser().parseResource(Bundle.class, content);
assertEquals("Bundle/example/_history/1", parsed.getId().getValue());
assertEquals("1", parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.VERSION));
assertEquals("1", parsed.getId().getVersionIdPart());
assertEquals(new InstantDt("2014-08-18T01:43:30Z"), parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.UPDATED));
assertEquals("searchset", parsed.getType().getValue());
assertEquals(3, parsed.getTotalResults().getValue().intValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2", parsed.getLinkNext().getValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&_include=MedicationOrder.medication", parsed.getLinkSelf().getValue());
assertEquals("searchset", parsed.getTypeElement().getValueAsString());
assertEquals(3, parsed.getTotalElement().getValue().intValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2", parsed.getLink("next").getUrl());
assertEquals("https://example.com/base/MedicationOrder?patient=347&_include=MedicationOrder.medication", parsed.getLink("self").getUrl());
assertEquals(2, parsed.getEntries().size());
assertEquals(2, parsed.getEntry().size());
MedicationOrder p = (MedicationOrder) parsed.getEntries().get(0).getResource();
MedicationOrder p = (MedicationOrder) parsed.getEntry().get(0).getResource();
assertEquals("Patient/347", p.getPatient().getReference().getValue());
assertEquals("2014-08-16T05:31:17Z", ResourceMetadataKeyEnum.UPDATED.get(p).getValueAsString());
assertEquals("http://example.com/base/MedicationOrder/3123/_history/1", p.getId().getValue());
Medication m = (Medication) parsed.getEntries().get(1).getResource();
Medication m = (Medication) parsed.getEntry().get(1).getResource();
assertEquals("http://example.com/base/Medication/example", m.getId().getValue());
assertSame(((ResourceReferenceDt) p.getMedication()).getResource(), m);
String reencoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeBundleToString(parsed);
String reencoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(parsed);
ourLog.info(reencoded);
JsonConfig cfg = new JsonConfig();
@ -1130,7 +1077,7 @@ public class JsonParserDstu2Test {
assertEquals("1", parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.VERSION));
assertEquals("1", parsed.getId().getVersionIdPart());
assertEquals(new InstantDt("2014-08-18T01:43:30Z"), parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.UPDATED));
assertEquals("searchset", parsed.getType());
assertEquals("searchset", parsed.getTypeElement().getValue());
assertEquals(3, parsed.getTotal().intValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2", parsed.getLink().get(0).getUrlElement().getValueAsString());
assertEquals("https://example.com/base/MedicationOrder?patient=347&_include=MedicationOrder.medication", parsed.getLink().get(1).getUrlElement().getValueAsString());
@ -1169,25 +1116,25 @@ public class JsonParserDstu2Test {
public void testParseAndEncodeBundleOldStyle() throws Exception {
String content = IOUtils.toString(JsonParserDstu2Test.class.getResourceAsStream("/bundle-example.json"));
Bundle parsed = ourCtx.newJsonParser().parseBundle(content);
Bundle parsed = ourCtx.newJsonParser().parseResource(Bundle.class, content);
assertEquals(new InstantDt("2014-08-18T01:43:30Z"), parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.UPDATED));
assertEquals("searchset", parsed.getType().getValue());
assertEquals(3, parsed.getTotalResults().getValue().intValue());
assertEquals("searchset", parsed.getTypeElement().getValue());
assertEquals(3, parsed.getTotalElement().getValue().intValue());
assertEquals(2, parsed.getEntries().size());
assertEquals(2, parsed.getEntry().size());
MedicationOrder p = (MedicationOrder) parsed.getEntries().get(0).getResource();
MedicationOrder p = (MedicationOrder) parsed.getEntry().get(0).getResource();
assertEquals("Patient/347", p.getPatient().getReference().getValue());
assertEquals("2014-08-16T05:31:17Z", ResourceMetadataKeyEnum.UPDATED.get(p).getValueAsString());
assertEquals("http://example.com/base/MedicationOrder/3123/_history/1", p.getId().getValue());
Medication m = (Medication) parsed.getEntries().get(1).getResource();
Medication m = (Medication) parsed.getEntry().get(1).getResource();
assertEquals("http://example.com/base/Medication/example", m.getId().getValue());
assertEquals("Medication/example", ((ResourceReferenceDt) p.getMedication()).getReference().getValue());
assertSame(((ResourceReferenceDt) p.getMedication()).getResource(), m);
String reencoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeBundleToString(parsed);
String reencoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(parsed);
ourLog.info(reencoded);
JsonConfig cfg = new JsonConfig();
@ -1211,31 +1158,13 @@ public class JsonParserDstu2Test {
public void testParseAndEncodeBundleResourceWithComments() throws Exception {
String content = IOUtils.toString(JsonParserDstu2Test.class.getResourceAsStream("/bundle-transaction2.json"));
ourCtx.newJsonParser().parseBundle(content);
ourCtx.newJsonParser().parseResource(Bundle.class, content);
ca.uhn.fhir.model.dstu2.resource.Bundle parsed = ourCtx.newJsonParser().parseResource(ca.uhn.fhir.model.dstu2.resource.Bundle.class, content);
// TODO: preserve comments
}
@Test
public void testParseAndEncodeBundleWithDeletedEntry() {
Patient res = new Patient();
res.setId(new IdDt("Patient", "111", "222"));
ResourceMetadataKeyEnum.DELETED_AT.put(res, new InstantDt("2011-01-01T12:12:22Z"));
Bundle bundle = new Bundle();
bundle.addResource(res, ourCtx, "http://foo/base");
String actual = ourCtx.newJsonParser().encodeBundleToString(bundle);
ourLog.info(actual);
String expected = "{\"resourceType\":\"Bundle\",\"entry\":[{\"deleted\":{\"type\":\"Patient\",\"resourceId\":\"111\",\"versionId\":\"222\",\"instant\":\"2011-01-01T12:12:22Z\"}}]}";
assertEquals(expected, actual);
}
@Test
public void testParseAndEncodeBundleWithUuidBase() {
//@formatter:off
@ -1531,38 +1460,32 @@ public class JsonParserDstu2Test {
" \"lastUpdated\" : \"2001-02-22T11:22:33-05:00\"\n" +
" },\n" +
" \"birthDate\" : \"2012-01-02\"\n" +
" },\n" +
" \"search\" : {\n" +
" \"mode\" : \"match\",\n" +
" \"score\" : 0.123\n" +
" },\n" +
" \"request\" : {\n" +
" \"method\" : \"POST\",\n" +
" \"url\" : \"http://foo/Patient?identifier=value\"\n" +
" }\n" +
" }]\n" +
"}";
//@formatter:on
Bundle b = ourCtx.newJsonParser().parseBundle(bundle);
assertEquals(1, b.getEntries().size());
Bundle b = ourCtx.newJsonParser().parseResource(Bundle.class, bundle);
assertEquals(1, b.getEntry().size());
Patient pt = (Patient) b.getEntries().get(0).getResource();
Patient pt = (Patient) b.getEntry().get(0).getResource();
assertEquals("http://foo/fhirBase2/Patient/1/_history/2", pt.getId().getValue());
assertEquals("2012-01-02", pt.getBirthDateElement().getValueAsString());
assertEquals("0.123", ResourceMetadataKeyEnum.ENTRY_SCORE.get(pt).getValueAsString());
assertEquals("match", ResourceMetadataKeyEnum.ENTRY_SEARCH_MODE.get(pt).getCode());
assertEquals("POST", ResourceMetadataKeyEnum.ENTRY_TRANSACTION_METHOD.get(pt).getCode());
assertEquals("http://foo/Patient?identifier=value", ResourceMetadataKeyEnum.LINK_SEARCH.get(pt));
assertEquals("2001-02-22T11:22:33-05:00", ResourceMetadataKeyEnum.UPDATED.get(pt).getValueAsString());
// assertEquals("match", ResourceMetadataKeyEnum.ENTRY_SEARCH_MODE.get(pt).getCode());
// assertEquals("POST", ResourceMetadataKeyEnum.ENTRY_TRANSACTION_METHOD.get(pt).getCode());
// assertEquals("http://foo/Patient?identifier=value", ResourceMetadataKeyEnum.LINK_SEARCH.get(pt));
// assertEquals("2001-02-22T11:22:33-05:00", ResourceMetadataKeyEnum.UPDATED.get(pt).getValueAsString());
Bundle toBundle = new Bundle();
toBundle.getLinkBase().setValue("http://foo/fhirBase1");
toBundle.getTotalResults().setValue(1);
toBundle.getLinkSelf().setValue("http://localhost:52788/Binary?_pretty=true");
toBundle.getTotalElement().setValue(1);
// toBundle.getLinkOrCreate("base").setUrl("http://foo/fhirBase1");
toBundle.getLinkOrCreate("self").setUrl("http://localhost:52788/Binary?_pretty=true");
toBundle.addResource(pt, ourCtx, "http://foo/fhirBase1");
String reEncoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeBundleToString(toBundle);
toBundle
.addEntry()
.setFullUrl("http://foo/fhirBase2/Patient/1/_history/2")
.setResource(pt);
String reEncoded = ourCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(toBundle);
JsonConfig cfg = new JsonConfig();
@ -1692,9 +1615,9 @@ public class JsonParserDstu2Test {
String text = "{\"resourceType\":\"Bundle\",\"id\":null,\"base\":\"http://localhost:57931/fhir/contextDev\",\"total\":1,\"link\":[{\"relation\":\"self\",\"url\":\"http://localhost:57931/fhir/contextDev/Patient?identifier=urn%3AMultiFhirVersionTest%7CtestSubmitPatient01&_format=json\"}],\"entry\":[{\"resource\":{\"resourceType\":\"Patient\",\"id\":\"1\",\"meta\":{\"versionId\":\"1\",\"lastUpdated\":\"2014-12-20T18:41:29.706-05:00\"},\"identifier\":[{\"system\":\"urn:MultiFhirVersionTest\",\"value\":\"testSubmitPatient01\"}]}}]}";
FhirContext ctx = FhirContext.forDstu2();
Bundle b = ctx.newJsonParser().parseBundle(text);
Bundle b = ctx.newJsonParser().parseResource(Bundle.class, text);
IResource patient = b.getEntries().get(0).getResource();
IResource patient = b.getEntry().get(0).getResource();
assertEquals(Patient.class, patient.getClass());
assertNull(ResourceMetadataKeyEnum.TAG_LIST.get(patient));
@ -1999,29 +1922,29 @@ public class JsonParserDstu2Test {
patient.setPetName(new StringDt("myName"));
final Bundle bundle = new Bundle();
final BundleEntry entry = new BundleEntry();
final Entry entry = new Entry();
entry.setResource(patient);
bundle.addEntry(entry);
final IParser jsonParser = ourCtx.newJsonParser();
jsonParser.setServerBaseUrl("http://www.example.com");
final String parsedBundle = jsonParser.encodeBundleToString(bundle);
final String parsedBundle = jsonParser.encodeResourceToString(bundle);
System.out.println(parsedBundle);
assertEquals(expected, parsedBundle);
// Parse with string
Bundle newBundle = jsonParser.parseBundle(parsedBundle);
Bundle newBundle = jsonParser.parseResource(Bundle.class, parsedBundle);
assertNotNull(newBundle);
assertEquals(1, newBundle.getEntries().size());
Patient newPatient = (Patient) newBundle.getEntries().get(0).getResource();
assertEquals(1, newBundle.getEntry().size());
Patient newPatient = (Patient) newBundle.getEntry().get(0).getResource();
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
// Parse with stream
newBundle = jsonParser.parseBundle(new StringReader(parsedBundle));
newBundle = jsonParser.parseResource(Bundle.class, new StringReader(parsedBundle));
assertNotNull(newBundle);
assertEquals(1, newBundle.getEntries().size());
newPatient = (Patient) newBundle.getEntries().get(0).getResource();
assertEquals(1, newBundle.getEntry().size());
newPatient = (Patient) newBundle.getEntry().get(0).getResource();
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
}

168
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/parser/XmlParserDstu2Test.java
View File

@ -41,7 +41,6 @@ import com.google.common.collect.Sets;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.*;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.annotation.Child;
import ca.uhn.fhir.model.api.annotation.ResourceDef;
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
@ -140,7 +139,6 @@ public class XmlParserDstu2Test {
}
/**
* See #414
*/
@ -192,7 +190,7 @@ public class XmlParserDstu2Test {
assertEquals("#3", performer.getId().getValue());
}
@Test(expected=DataFormatException.class)
@Test(expected = DataFormatException.class)
public void testContainedResourceWithNoId() throws IOException {
String string = IOUtils.toString(getClass().getResourceAsStream("/bundle_with_contained_with_no_id.xml"), StandardCharsets.UTF_8);
@ -201,7 +199,6 @@ public class XmlParserDstu2Test {
parser.parseResource(ca.uhn.fhir.model.dstu2.resource.Bundle.class, string);
}
@Test()
public void testContainedResourceWithNoIdLenient() throws IOException {
String string = IOUtils.toString(getClass().getResourceAsStream("/bundle_with_contained_with_no_id.xml"), StandardCharsets.UTF_8);
@ -211,7 +208,7 @@ public class XmlParserDstu2Test {
parser.parseResource(ca.uhn.fhir.model.dstu2.resource.Bundle.class, string);
}
@Test(expected=DataFormatException.class)
@Test(expected = DataFormatException.class)
public void testParseWithInvalidLocalRef() throws IOException {
String string = IOUtils.toString(getClass().getResourceAsStream("/bundle_with_invalid_contained_ref.xml"), StandardCharsets.UTF_8);
@ -229,7 +226,6 @@ public class XmlParserDstu2Test {
parser.parseResource(ca.uhn.fhir.model.dstu2.resource.Bundle.class, string);
}
@Test
public void testBundleWithBinary() {
//@formatter:off
@ -254,10 +250,10 @@ public class XmlParserDstu2Test {
"</Bundle>";
//@formatter:on
Bundle b = ourCtx.newXmlParser().parseBundle(bundle);
assertEquals(1, b.getEntries().size());
Bundle b = ourCtx.newXmlParser().parseResource(Bundle.class, bundle);
assertEquals(1, b.getEntry().size());
Binary bin = (Binary) b.getEntries().get(0).getResource();
Binary bin = (Binary) b.getEntry().get(0).getResource();
assertArrayEquals(new byte[] { 1, 2, 3, 4 }, bin.getContent());
}
@ -299,7 +295,6 @@ public class XmlParserDstu2Test {
assertEquals(MarkdownDt.class, par.getParameter().get(1).getValue().getClass());
}
@Test
public void testContainedResourceInExtensionUndeclared() {
Patient p = new Patient();
@ -359,13 +354,14 @@ public class XmlParserDstu2Test {
Organization org = new Organization();
org.addIdentifier().setSystem("urn:system").setValue("someval");
Bundle bundle = Bundle.withSingleResource(org);
String str = ourCtx.newXmlParser().encodeBundleToString(bundle);
Bundle bundle = new Bundle();
bundle.addEntry().setResource(org);
String str = ourCtx.newXmlParser().encodeResourceToString(bundle);
ourLog.info(str);
Bundle parsed = ourCtx.newXmlParser().parseBundle(str);
assertThat(parsed.getEntries().get(0).getResource().getId().getValue(), emptyOrNullString());
assertTrue(parsed.getEntries().get(0).getResource().getId().isEmpty());
Bundle parsed = ourCtx.newXmlParser().parseResource(Bundle.class, str);
assertThat(parsed.getEntry().get(0).getResource().getId().getValue(), emptyOrNullString());
assertTrue(parsed.getEntry().get(0).getResource().getId().isEmpty());
}
@Test
@ -560,7 +556,6 @@ public class XmlParserDstu2Test {
ourCtx = null;
}
@Test
public void testEncodeAndParseContainedNonCustomTypes() {
ourCtx = FhirContext.forDstu2();
@ -1120,9 +1115,9 @@ public class XmlParserDstu2Test {
p.addName().addFamily("PATIENT");
Bundle b = new Bundle();
b.addEntry().setResource(p);
b.addEntry().setFullUrl(p.getId().getValue()).setResource(p);
String encoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeBundleToString(b);
String encoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(b);
ourLog.info(encoded);
assertThat(encoded, stringContainsInOrder("<Bundle", "<entry>", "<fullUrl value=\"" + p.getId().getValue() + "\"/>", "<Patient"));
assertThat(encoded, not(containsString("<id value=\"" + p.getId().getIdPart() + "\"/>")));
@ -1135,10 +1130,10 @@ public class XmlParserDstu2Test {
p.addName().addFamily("PATIENT");
Bundle b = new Bundle();
b.getLinkBase().setValue("urn:uuid:");
b.getLinkOrCreate("base").setUrl("urn:uuid:");
b.addEntry().setResource(p);
String encoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeBundleToString(b);
String encoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(b);
ourLog.info(encoded);
// Base element has been removed!
assertThat(encoded, not(stringContainsInOrder("<Bundle", "<entry>", "<base value=\"", "<Patient", "<id value=")));
@ -1912,30 +1907,30 @@ public class XmlParserDstu2Test {
public void testParseAndEncodeBundle() throws Exception {
String content = IOUtils.toString(XmlParserDstu2Test.class.getResourceAsStream("/bundle-example.xml"), StandardCharsets.UTF_8);
Bundle parsed = ourCtx.newXmlParser().parseBundle(content);
Bundle parsed = ourCtx.newXmlParser().parseResource(Bundle.class, content);
assertEquals("Bundle/example/_history/1", parsed.getId().getValue());
assertEquals("1", parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.VERSION));
assertEquals("1", parsed.getId().getVersionIdPart());
assertEquals(new InstantDt("2014-08-18T01:43:30Z"), parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.UPDATED));
assertEquals("searchset", parsed.getType().getValue());
assertEquals(3, parsed.getTotalResults().getValue().intValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2", parsed.getLinkNext().getValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&_include=MedicationOrder.medication", parsed.getLinkSelf().getValue());
assertEquals("searchset", parsed.getTypeElement().getValue());
assertEquals(3, parsed.getTotalElement().getValue().intValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2", parsed.getLink("next").getUrl());
assertEquals("https://example.com/base/MedicationOrder?patient=347&_include=MedicationOrder.medication", parsed.getLink("self").getUrl());
assertEquals(2, parsed.getEntries().size());
assertEquals("http://foo?search", parsed.getEntries().get(0).getLinkSearch().getValue());
assertEquals(2, parsed.getEntry().size());
// assertEquals("http://foo?search", parsed.getEntry().get(0).getLink("search").getUrl());
// assertEquals("http://example.com/base/MedicationOrder/3123/_history/1", parsed.getEntry().get(0).getLink("alternate").getUrl());
assertEquals("http://example.com/base/MedicationOrder/3123/_history/1", parsed.getEntries().get(0).getLinkAlternate().getValue());
MedicationOrder p = (MedicationOrder) parsed.getEntries().get(0).getResource();
MedicationOrder p = (MedicationOrder) parsed.getEntry().get(0).getResource();
assertEquals("Patient/347", p.getPatient().getReference().getValue());
assertEquals("2014-08-16T05:31:17Z", ResourceMetadataKeyEnum.UPDATED.get(p).getValueAsString());
assertEquals("http://example.com/base/MedicationOrder/3123/_history/1", p.getId().getValue());
Medication m = (Medication) parsed.getEntries().get(1).getResource();
Medication m = (Medication) parsed.getEntry().get(1).getResource();
assertEquals("http://example.com/base/Medication/example", m.getId().getValue());
assertSame(((ResourceReferenceDt) p.getMedication()).getResource(), m);
String reencoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeBundleToString(parsed);
String reencoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(parsed);
ourLog.info(reencoded);
Diff d = new Diff(new StringReader(content), new StringReader(reencoded));
@ -1952,7 +1947,7 @@ public class XmlParserDstu2Test {
assertEquals("Bundle/example/_history/1", parsed.getId().getValue());
assertEquals("1", parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.VERSION));
assertEquals(new InstantDt("2014-08-18T01:43:30Z"), parsed.getResourceMetadata().get(ResourceMetadataKeyEnum.UPDATED));
assertEquals("searchset", parsed.getType());
assertEquals("searchset", parsed.getTypeElement().getValueAsString());
assertEquals(3, parsed.getTotal().intValue());
assertEquals("https://example.com/base/MedicationOrder?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2", parsed.getLink().get(0).getUrlElement().getValueAsString());
assertEquals("https://example.com/base/MedicationOrder?patient=347&_include=MedicationOrder.medication", parsed.getLink().get(1).getUrlElement().getValueAsString());
@ -2404,46 +2399,8 @@ public class XmlParserDstu2Test {
"</Bundle>";
//@formatter:on
Bundle b = ourCtx.newXmlParser().parseBundle(bundle);
assertEquals(1, b.getEntries().size());
}
@Test
public void testParseBundleOldWithPlaceholderIds() {
//@formatter:off
String input = "<Bundle xmlns=\"http://hl7.org/fhir\">\n" +
" <id value=\"ringholm1430996763590912\"/>\n" +
" <entry>\n" +
" <base value=\"urn:oid:\"/>\n" +
" <resource>\n" +
" <Provenance>\n" +
" <id value=\"0.1.2.3\"/>\n" +
" </Provenance>\n" +
" </resource>\n" +
" </entry>\n" +
"</Bundle>\n";
//@formatter:on
Bundle parsed = ourCtx.newXmlParser().parseBundle(input);
assertEquals("urn:oid:0.1.2.3", parsed.getEntries().get(0).getResource().getId().getValue());
//@formatter:off
input = "<Bundle xmlns=\"http://hl7.org/fhir\">\n" +
" <id value=\"ringholm1430996763590912\"/>\n" +
" <entry>\n" +
" <base value=\"urn:oid\"/>\n" + // no trailing :, invalid but we'll be nice
" <resource>\n" +
" <Provenance>\n" +
" <id value=\"0.1.2.3\"/>\n" +
" </Provenance>\n" +
" </resource>\n" +
" </entry>\n" +
"</Bundle>\n";
//@formatter:on
parsed = ourCtx.newXmlParser().parseBundle(input);
assertEquals("urn:oid:0.1.2.3", parsed.getEntries().get(0).getResource().getId().getValue());
Bundle b = ourCtx.newXmlParser().parseResource(Bundle.class, bundle);
assertEquals(1, b.getEntry().size());
}
@ -2452,8 +2409,6 @@ public class XmlParserDstu2Test {
// TODO: implement this test, make sure we handle ID and meta correctly in Binary
}
/**
* See #191
*/
@ -2559,7 +2514,7 @@ public class XmlParserDstu2Test {
/**
* See #366
*/
@Test(expected=DataFormatException.class)
@Test(expected = DataFormatException.class)
public void testParseInvalidBoolean() {
//@formatter:off
String resource = "<Patient xmlns=\"http://hl7.org/fhir\">\n" +
@ -2567,7 +2522,6 @@ public class XmlParserDstu2Test {
"</Patient>";
//@formatter:on
IParser parser = ourCtx.newXmlParser();
parser.setParserErrorHandler(new StrictErrorHandler());
parser.parseResource(resource);
@ -2621,6 +2575,10 @@ public class XmlParserDstu2Test {
String bundle = "<Bundle xmlns=\"http://hl7.org/fhir\">\n" +
" <total value=\"1\"/>\n" +
" <link>\n" +
" <relation value=\"base\"/>\n" +
" <url value=\"http://foo/fhirBase1\"/>\n" +
" </link>\n" +
" <link>\n" +
" <relation value=\"self\"/>\n" +
" <url value=\"http://localhost:52788/Binary?_pretty=true\"/>\n" +
" </link>\n" +
@ -2636,37 +2594,33 @@ public class XmlParserDstu2Test {
" <birthDate value=\"2012-01-02\"/>\n" +
" </Patient>\n" +
" </resource>\n" +
" <search>\n" +
" <mode value=\"match\"/>\n" +
" <score value=\"0.123\"/>\n" +
" </search>\n" +
" <request>\n" +
" <method value=\"POST\"/>\n" +
" <url value=\"http://foo/Patient?identifier=value\"/>\n" +
" </request>\n" +
" </entry>\n" +
"</Bundle>";
//@formatter:on
Bundle b = ourCtx.newXmlParser().parseBundle(bundle);
assertEquals(1, b.getEntries().size());
Bundle b = ourCtx.newXmlParser().parseResource(Bundle.class, bundle);
assertEquals(1, b.getEntry().size());
Patient pt = (Patient) b.getEntries().get(0).getResource();
Patient pt = (Patient) b.getEntry().get(0).getResource();
assertEquals("http://foo/fhirBase2/Patient/1/_history/2", pt.getId().getValue());
assertEquals("2012-01-02", pt.getBirthDateElement().getValueAsString());
assertEquals("0.123", ResourceMetadataKeyEnum.ENTRY_SCORE.get(pt).getValueAsString());
assertEquals("match", ResourceMetadataKeyEnum.ENTRY_SEARCH_MODE.get(pt).getCode());
assertEquals("POST", ResourceMetadataKeyEnum.ENTRY_TRANSACTION_METHOD.get(pt).getCode());
assertEquals("http://foo/Patient?identifier=value", ResourceMetadataKeyEnum.LINK_SEARCH.get(pt));
assertEquals("2001-02-22T11:22:33-05:00", ResourceMetadataKeyEnum.UPDATED.get(pt).getValueAsString());
// assertEquals("0.123", ResourceMetadataKeyEnum.ENTRY_SCORE.get(pt).getValueAsString());
// assertEquals("match", ResourceMetadataKeyEnum.ENTRY_SEARCH_MODE.get(pt).getCode());
// assertEquals("POST", ResourceMetadataKeyEnum.ENTRY_TRANSACTION_METHOD.get(pt).getCode());
// assertEquals("http://foo/Patient?identifier=value", ResourceMetadataKeyEnum.LINK_SEARCH.get(pt));
// assertEquals("2001-02-22T11:22:33-05:00", ResourceMetadataKeyEnum.UPDATED.get(pt).getValueAsString());
Bundle toBundle = new Bundle();
toBundle.getLinkBase().setValue("http://foo/fhirBase1");
toBundle.getTotalResults().setValue(1);
toBundle.getLinkSelf().setValue("http://localhost:52788/Binary?_pretty=true");
toBundle.getLinkOrCreate("base").setUrl("http://foo/fhirBase1");
toBundle.getTotalElement().setValue(1);
toBundle.getLinkOrCreate("self").setUrl("http://localhost:52788/Binary?_pretty=true");
toBundle.addResource(pt, ourCtx, "http://foo/fhirBase1");
String reEncoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeBundleToString(toBundle);
toBundle
.addEntry()
.setResource(pt)
.setFullUrl("http://foo/fhirBase2/Patient/1/_history/2");
String reEncoded = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(toBundle);
ourLog.info(reEncoded);
@ -2769,7 +2723,7 @@ public class XmlParserDstu2Test {
assertEquals("Patient", reincarnatedPatient.getId().getResourceType());
}
/**
/**
* Test for the url generated based on the server config
*/
@Test
@ -2811,7 +2765,7 @@ public class XmlParserDstu2Test {
newPatient = xmlParser.parseResource(MyPatientWithCustomUrlExtension.class, new StringReader(parsedPatient));
assertEquals("myName", newPatient.getPetName().getValue());
//Check no NPE if base server not configure
// Check no NPE if base server not configure
newPatient = ourCtx.newXmlParser().parseResource(MyPatientWithCustomUrlExtension.class, new StringReader(parsedPatient));
assertNull("myName", newPatient.getPetName().getValue());
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
@ -2825,29 +2779,29 @@ public class XmlParserDstu2Test {
patient.setPetName(new StringDt("myName"));
final Bundle bundle = new Bundle();
final BundleEntry entry = new BundleEntry();
final Entry entry = new Entry();
entry.setResource(patient);
bundle.addEntry(entry);
final IParser xmlParser = ourCtx.newXmlParser();
xmlParser.setServerBaseUrl("http://www.example.com");
final String parsedBundle = xmlParser.encodeBundleToString(bundle);
final String parsedBundle = xmlParser.encodeResourceToString(bundle);
System.out.println(parsedBundle);
assertEquals(expected, parsedBundle);
// Parse with string
Bundle newBundle = xmlParser.parseBundle(parsedBundle);
Bundle newBundle = xmlParser.parseResource(Bundle.class, parsedBundle);
assertNotNull(newBundle);
assertEquals(1, newBundle.getEntries().size());
Patient newPatient = (Patient) newBundle.getEntries().get(0).getResource();
assertEquals(1, newBundle.getEntry().size());
Patient newPatient = (Patient) newBundle.getEntry().get(0).getResource();
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
// Parse with stream
newBundle = xmlParser.parseBundle(new StringReader(parsedBundle));
newBundle = xmlParser.parseResource(Bundle.class, new StringReader(parsedBundle));
assertNotNull(newBundle);
assertEquals(1, newBundle.getEntries().size());
newPatient = (Patient) newBundle.getEntries().get(0).getResource();
assertEquals(1, newBundle.getEntry().size());
newPatient = (Patient) newBundle.getEntry().get(0).getResource();
assertEquals("myName", ((StringDt) newPatient.getUndeclaredExtensionsByUrl("http://www.example.com/petname").get(0).getValue()).getValue());
}

8
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/client/BundleTypeDstu2Test.java
View File

@ -25,7 +25,7 @@ import org.mockito.ArgumentCaptor;
import org.mockito.internal.stubbing.defaultanswers.ReturnsDeepStubs;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.valueset.BundleTypeEnum;
import ca.uhn.fhir.rest.api.Constants;
@ -62,7 +62,7 @@ public class BundleTypeDstu2Test {
@Test
public void testTransaction() throws Exception {
String retVal = ourCtx.newXmlParser().encodeBundleToString(new Bundle());
String retVal = ourCtx.newXmlParser().encodeResourceToString(new Bundle());
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(ourHttpClient.execute(capt.capture())).thenReturn(ourHttpResponse);
@ -94,9 +94,9 @@ public class BundleTypeDstu2Test {
IGenericClient client = ctx.newRestfulGenericClient("http://54.165.58.158:8081/FHIRServer/fhir");
client.registerInterceptor(new BearerTokenAuthInterceptor("AN3uCTC5B"));
client.registerInterceptor(new LoggingInterceptor(true));
Bundle result = client.search().forResource(Patient.class).where(Patient.NAME.matches().value("Alice")).execute();
Bundle result = client.search().forResource(Patient.class).where(Patient.NAME.matches().value("Alice")).returnBundle(Bundle.class).execute();
System.out.println(result.getEntries().size());
System.out.println(result.getEntry().size());
}

216
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/client/GenericClientDstu2Test.java
View File

@ -36,7 +36,6 @@ import org.mockito.stubbing.Answer;
import ca.uhn.fhir.context.ConfigurationException;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.*;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.dstu2.composite.IdentifierDt;
import ca.uhn.fhir.model.dstu2.composite.MetaDt;
import ca.uhn.fhir.model.dstu2.resource.*;
@ -261,7 +260,7 @@ public class GenericClientDstu2Test {
int idx = 0;
//@formatter:off
Conformance resp = (Conformance)client.conformance();
Conformance resp = (Conformance)client.fetchConformance().ofType(Conformance.class).execute();
//@formatter:on
assertEquals("http://example.com/fhir/metadata", capt.getAllValues().get(idx).getURI().toASCIIString());
@ -381,7 +380,7 @@ public class GenericClientDstu2Test {
Patient p = new Patient();
p.addName().addFamily("FOOFAMILY");
client.create(p);
client.create().resource(p).execute();
assertEquals(1, capt.getAllValues().get(idx).getHeaders(Constants.HEADER_CONTENT_TYPE).length);
assertEquals(EncodingEnum.XML.getResourceContentType() + Constants.HEADER_SUFFIX_CT_UTF_8, capt.getAllValues().get(idx).getFirstHeader(Constants.HEADER_CONTENT_TYPE).getValue());
@ -519,68 +518,39 @@ public class GenericClientDstu2Test {
try {
client.delete().resource(pat).execute();
fail();
} catch (IllegalArgumentException e){
} catch (IllegalArgumentException e) {
assertEquals("theResource.getId() must contain a resource type and logical ID at a minimum (e.g. Patient/1234), found: 123", e.getMessage());
}
try {
client.delete().resourceById(new IdDt("123")).execute();
fail();
} catch (IllegalArgumentException e){
} catch (IllegalArgumentException e) {
assertEquals("theId must contain a resource type and logical ID at a minimum (e.g. Patient/1234)found: 123", e.getMessage());
}
try {
client.delete().resourceById("", "123").execute();
fail();
} catch (IllegalArgumentException e){
} catch (IllegalArgumentException e) {
assertEquals("theResourceType can not be blank/null", e.getMessage());
}
try {
client.delete().resourceById("Patient", "").execute();
fail();
} catch (IllegalArgumentException e){
} catch (IllegalArgumentException e) {
assertEquals("theLogicalId can not be blank/null", e.getMessage());
}
try {
client.delete().resourceConditionalByType("InvalidType");
fail();
} catch (DataFormatException e){
} catch (DataFormatException e) {
assertEquals("Unknown resource name \"InvalidType\" (this name is not known in FHIR version \"DSTU2\")", e.getMessage());
}
}
@SuppressWarnings("deprecation")
@Test
public void testDeleteNonFluent() throws Exception {
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), Constants.STATUS_HTTP_204_NO_CONTENT, ""));
when(myHttpResponse.getEntity().getContent()).then(new Answer<ReaderInputStream>() {
@Override
public ReaderInputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(""), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
client.delete(Patient.class, new IdDt("Patient/123"));
assertEquals("DELETE", capt.getAllValues().get(idx).getMethod());
assertEquals("http://example.com/fhir/Patient/123", capt.getAllValues().get(idx).getURI().toString());
idx++;
client.delete(Patient.class, "123");
assertEquals("DELETE", capt.getAllValues().get(idx).getMethod());
assertEquals("http://example.com/fhir/Patient/123", capt.getAllValues().get(idx).getURI().toString());
idx++;
}
/**
* See #322
*/
@ -731,7 +701,8 @@ public class GenericClientDstu2Test {
.since(new InstantDt("2001-01-02T11:22:33Z"))
.execute();
//@formatter:on
assertThat(capt.getAllValues().get(idx).getURI().toString(), either(equalTo("http://example.com/fhir/Patient/123/_history?_since=2001-01-02T11:22:33Z&_count=123")).or(equalTo("http://example.com/fhir/Patient/123/_history?_count=123&_since=2001-01-02T11:22:33Z")));
assertThat(capt.getAllValues().get(idx).getURI().toString(), either(equalTo("http://example.com/fhir/Patient/123/_history?_since=2001-01-02T11:22:33Z&_count=123"))
.or(equalTo("http://example.com/fhir/Patient/123/_history?_count=123&_since=2001-01-02T11:22:33Z")));
assertEquals(1, response.getEntry().size());
idx++;
@ -794,7 +765,8 @@ public class GenericClientDstu2Test {
assertEquals("http://example.com/fhir/Patient/123/$meta-add", capt.getAllValues().get(idx).getURI().toASCIIString());
assertEquals("urn:profile:out", resp.getProfile().get(0).getValue());
assertEquals("POST", capt.getAllValues().get(idx).getRequestLine().getMethod());
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"meta\"/><valueMeta><profile value=\"urn:profile:in\"/></valueMeta></parameter></Parameters>", extractBody(capt, idx));
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"meta\"/><valueMeta><profile value=\"urn:profile:in\"/></valueMeta></parameter></Parameters>",
extractBody(capt, idx));
idx++;
}
@ -1148,7 +1120,9 @@ public class GenericClientDstu2Test {
assertEquals(1, capt.getAllValues().get(idx).getHeaders(Constants.HEADER_CONTENT_TYPE).length);
assertEquals(EncodingEnum.XML.getResourceContentType() + Constants.HEADER_SUFFIX_CT_UTF_8, capt.getAllValues().get(idx).getFirstHeader(Constants.HEADER_CONTENT_TYPE).getValue());
assertEquals("POST", capt.getAllValues().get(idx).getRequestLine().getMethod());
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"name1\"/><valueString value=\"value1\"/></parameter><parameter><name value=\"name2\"/><valueString value=\"value1\"/></parameter></Parameters>", (extractBody(capt, idx)));
assertEquals(
"<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"name1\"/><valueString value=\"value1\"/></parameter><parameter><name value=\"name2\"/><valueString value=\"value1\"/></parameter></Parameters>",
(extractBody(capt, idx)));
idx++;
/*
@ -1169,7 +1143,8 @@ public class GenericClientDstu2Test {
assertEquals(1, capt.getAllValues().get(idx).getHeaders(Constants.HEADER_CONTENT_TYPE).length);
assertEquals(EncodingEnum.XML.getResourceContentType() + Constants.HEADER_SUFFIX_CT_UTF_8, capt.getAllValues().get(idx).getFirstHeader(Constants.HEADER_CONTENT_TYPE).getValue());
assertEquals("POST", capt.getAllValues().get(idx).getRequestLine().getMethod());
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"name1\"/><valueIdentifier><system value=\"system1\"/><value value=\"value1\"/></valueIdentifier></parameter><parameter><name value=\"name2\"/><valueString value=\"value1\"/></parameter></Parameters>",
assertEquals(
"<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"name1\"/><valueIdentifier><system value=\"system1\"/><value value=\"value1\"/></valueIdentifier></parameter><parameter><name value=\"name2\"/><valueString value=\"value1\"/></parameter></Parameters>",
(extractBody(capt, idx)));
idx++;
@ -1709,7 +1684,8 @@ public class GenericClientDstu2Test {
.execute();
//@formatter:on
assertThat(capt.getValue().getURI().toString(), either(equalTo("http://example.com/fhir/Patient/123?_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient/123?_elements=identifier%2Cname")));
assertThat(capt.getValue().getURI().toString(),
either(equalTo("http://example.com/fhir/Patient/123?_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient/123?_elements=identifier%2Cname")));
assertEquals(Patient.class, response.getClass());
}
@ -1848,21 +1824,20 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.elementsSubset("name", "identifier")
.usingStyle(SearchStyleEnum.POST)
.execute();
//@formatter:on
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.elementsSubset("name", "identifier")
.usingStyle(SearchStyleEnum.POST)
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient/_search?_elements=identifier%2Cname", capt.getValue().getURI().toString());
// assertThat(capt.getValue().getURI().toString(),
// either(equalTo("http://example.com/fhir/Patient?name=james&_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient?name=james&_elements=identifier%2Cname")));
// assertThat(capt.getValue().getURI().toString(),
// either(equalTo("http://example.com/fhir/Patient?name=james&_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient?name=james&_elements=identifier%2Cname")));
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
ourLog.info(Arrays.asList(capt.getValue().getAllHeaders()).toString());
ourLog.info(capt.getValue().toString());
@ -1888,24 +1863,23 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.elementsSubset("name", "identifier")
.usingStyle(SearchStyleEnum.POST)
.encodedJson()
.execute();
//@formatter:on
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.elementsSubset("name", "identifier")
.usingStyle(SearchStyleEnum.POST)
.encodedJson()
.returnBundle(Bundle.class)
.execute();
assertThat(capt.getValue().getURI().toString(), containsString("http://example.com/fhir/Patient/_search?"));
assertThat(capt.getValue().getURI().toString(), containsString("_elements=identifier%2Cname"));
assertThat(capt.getValue().getURI().toString(), not(containsString("_format=json")));
// assertThat(capt.getValue().getURI().toString(),
// either(equalTo("http://example.com/fhir/Patient?name=james&_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient?name=james&_elements=identifier%2Cname")));
// assertThat(capt.getValue().getURI().toString(),
// either(equalTo("http://example.com/fhir/Patient?name=james&_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient?name=james&_elements=identifier%2Cname")));
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
ourLog.info(Arrays.asList(capt.getValue().getAllHeaders()).toString());
ourLog.info(capt.getValue().toString());
@ -1930,15 +1904,14 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.execute();
//@formatter:on
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient?name=james", capt.getValue().getURI().toString());
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@ -2065,16 +2038,16 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.elementsSubset("name", "identifier")
.execute();
//@formatter:on
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.elementsSubset("name", "identifier")
.returnBundle(Bundle.class)
.execute();
assertThat(capt.getValue().getURI().toString(), either(equalTo("http://example.com/fhir/Patient?name=james&_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient?name=james&_elements=identifier%2Cname")));
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertThat(capt.getValue().getURI().toString(),
either(equalTo("http://example.com/fhir/Patient?name=james&_elements=name%2Cidentifier")).or(equalTo("http://example.com/fhir/Patient?name=james&_elements=identifier%2Cname")));
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@ -2090,16 +2063,15 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.lastUpdated(new DateRangeParam("2011-01-01", "2012-01-01"))
.execute();
//@formatter:on
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.lastUpdated(new DateRangeParam("2011-01-01", "2012-01-01"))
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient?name=james&_lastUpdated=ge2011-01-01&_lastUpdated=le2012-01-01", capt.getValue().getURI().toString());
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@ -2116,11 +2088,16 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
HashMap<String, List<IQueryParameterType>> params = new HashMap<String, List<IQueryParameterType>>();
params.put("foo", Arrays.asList((IQueryParameterType)new DateParam("2001")));
Bundle response = client.search(Patient.class, params);
params.put("foo", Arrays.asList((IQueryParameterType) new DateParam("2001")));
Bundle response = client
.search()
.forResource(Patient.class)
.where(params)
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient?foo=2001", capt.getValue().getURI().toString());
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@ -2136,18 +2113,17 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.withProfile("http://foo1")
.withProfile("http://foo2")
.withSecurity("system1", "code1")
.withSecurity("system2", "code2")
.execute();
//@formatter:on
Bundle response = client.search()
.forResource("Patient")
.withProfile("http://foo1")
.withProfile("http://foo2")
.withSecurity("system1", "code1")
.withSecurity("system2", "code2")
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient?_security=system1%7Ccode1&_security=system2%7Ccode2&_profile=http%3A%2F%2Ffoo1&_profile=http%3A%2F%2Ffoo2", capt.getValue().getURI().toString());
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@ -2165,13 +2141,12 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource(Patient.class)
.encodedJson()
.revInclude(new Include("Provenance:target"))
.returnBundle(Bundle.class)
.execute();
//@formatter:on
assertEquals("http://example.com/fhir/Patient?_revinclude=Provenance%3Atarget&_format=json", capt.getValue().getURI().toString());
@ -2189,16 +2164,15 @@ public class GenericClientDstu2Test {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
//@formatter:off
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.summaryMode(SummaryEnum.FALSE)
.execute();
//@formatter:on
Bundle response = client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value("james"))
.summaryMode(SummaryEnum.FALSE)
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient?name=james&_summary=false", capt.getValue().getURI().toString());
assertEquals(Patient.class, response.getEntries().get(0).getResource().getClass());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@ -2540,7 +2514,9 @@ public class GenericClientDstu2Test {
assertEquals("http://example.com/fhir/Patient/$validate", capt.getAllValues().get(idx).getURI().toASCIIString());
assertEquals("POST", capt.getAllValues().get(idx).getRequestLine().getMethod());
assertEquals("application/xml+fhir", capt.getAllValues().get(idx).getFirstHeader("content-type").getValue().replaceAll(";.*", ""));
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"resource\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><name><given value=\"GIVEN\"/></name></Patient></resource></parameter></Parameters>", extractBody(capt, idx));
assertEquals(
"<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"resource\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><name><given value=\"GIVEN\"/></name></Patient></resource></parameter></Parameters>",
extractBody(capt, idx));
assertNotNull(response.getOperationOutcome());
assertEquals("FOOBAR", toOo(response.getOperationOutcome()).getIssueFirstRep().getDiagnosticsElement().getValue());
idx++;
@ -2549,7 +2525,9 @@ public class GenericClientDstu2Test {
assertEquals("http://example.com/fhir/Patient/$validate", capt.getAllValues().get(idx).getURI().toASCIIString());
assertEquals("POST", capt.getAllValues().get(idx).getRequestLine().getMethod());
assertEquals("application/xml+fhir", capt.getAllValues().get(idx).getFirstHeader("content-type").getValue().replaceAll(";.*", ""));
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"resource\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><name><given value=\"GIVEN\"/></name></Patient></resource></parameter></Parameters>", extractBody(capt, idx));
assertEquals(
"<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"resource\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><name><given value=\"GIVEN\"/></name></Patient></resource></parameter></Parameters>",
extractBody(capt, idx));
assertNotNull(response.getOperationOutcome());
assertEquals("FOOBAR", toOo(response.getOperationOutcome()).getIssueFirstRep().getDiagnosticsElement().getValue());
idx++;
@ -2605,7 +2583,9 @@ public class GenericClientDstu2Test {
assertEquals("http://example.com/fhir/Patient/$validate", capt.getAllValues().get(idx).getURI().toASCIIString());
assertEquals("POST", capt.getAllValues().get(idx).getRequestLine().getMethod());
assertEquals("<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"resource\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><name><given value=\"GIVEN\"/></name></Patient></resource></parameter></Parameters>", extractBody(capt, idx));
assertEquals(
"<Parameters xmlns=\"http://hl7.org/fhir\"><parameter><name value=\"resource\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><name><given value=\"GIVEN\"/></name></Patient></resource></parameter></Parameters>",
extractBody(capt, idx));
assertNotNull(response.getOperationOutcome());
assertEquals("FOOBAR", toOo(response.getOperationOutcome()).getIssueFirstRep().getDiagnosticsElement().getValue());
idx++;
@ -2648,27 +2628,27 @@ public class GenericClientDstu2Test {
@Override
public void registerInterceptor(IClientInterceptor theInterceptor) {
//nothing
// nothing
}
@Override
public void setEncoding(EncodingEnum theEncoding) {
//nothing
// nothing
}
@Override
public void setPrettyPrint(Boolean thePrettyPrint) {
//nothing
// nothing
}
@Override
public void setSummary(SummaryEnum theSummary) {
//nothing
// nothing
}
@Override
public void unregisterInterceptor(IClientInterceptor theInterceptor) {
//nothing
// nothing
}
@Override

11
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/param/DateParamTest.java
View File

@ -16,7 +16,6 @@ import ca.uhn.fhir.model.primitive.InstantDt;
public class DateParamTest {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(DateParamTest.class);
@SuppressWarnings("deprecation")
@Test
public void testConstructors() {
new DateParam();
@ -98,4 +97,14 @@ public class DateParamTest {
assertEquals("2016-06-09T16:38:00.000-04:00", dt.getValueAsString());
}
@Test
public void testParseLegacyPrefixes() {
assertEquals(ParamPrefixEnum.APPROXIMATE, new DateParam("ap2012").getPrefix());
assertEquals(ParamPrefixEnum.GREATERTHAN, new DateParam("gt2012").getPrefix());
assertEquals(ParamPrefixEnum.GREATERTHAN_OR_EQUALS, new DateParam("ge2012").getPrefix());
assertEquals(ParamPrefixEnum.LESSTHAN, new DateParam("lt2012").getPrefix());
assertEquals(ParamPrefixEnum.LESSTHAN_OR_EQUALS, new DateParam("le2012").getPrefix());
}
}

10
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/server/BinaryDstu2Test.java
View File

@ -25,9 +25,9 @@ import org.eclipse.jetty.servlet.ServletHolder;
import org.junit.*;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.IResource;
import ca.uhn.fhir.model.dstu2.resource.Binary;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.primitive.IdDt;
import ca.uhn.fhir.rest.annotation.*;
import ca.uhn.fhir.rest.api.Constants;
@ -183,8 +183,8 @@ public class BinaryDstu2Test {
ourLog.info(responseContent);
Bundle bundle = ourCtx.newJsonParser().parseBundle(responseContent);
Binary bin = (Binary) bundle.getEntries().get(0).getResource();
Bundle bundle = ourCtx.newJsonParser().parseResource(Bundle.class, responseContent);
Binary bin = (Binary) bundle.getEntry().get(0).getResource();
assertEquals("text/plain", bin.getContentType());
assertArrayEquals(new byte[] { 1, 2, 3, 4 }, bin.getContent());
@ -201,8 +201,8 @@ public class BinaryDstu2Test {
ourLog.info(responseContent);
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
Binary bin = (Binary) bundle.getEntries().get(0).getResource();
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
Binary bin = (Binary) bundle.getEntry().get(0).getResource();
assertEquals("text/plain", bin.getContentType());
assertArrayEquals(new byte[] { 1, 2, 3, 4 }, bin.getContent());

12
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/server/BundleTypeInResponseTest.java
View File

@ -15,13 +15,11 @@ import org.apache.http.impl.conn.PoolingHttpClientConnectionManager;
import org.eclipse.jetty.server.Server;
import org.eclipse.jetty.servlet.ServletHandler;
import org.eclipse.jetty.servlet.ServletHolder;
import org.junit.AfterClass;
import org.junit.BeforeClass;
import org.junit.Test;
import org.junit.*;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.IResource;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.valueset.BundleTypeEnum;
import ca.uhn.fhir.narrative.DefaultThymeleafNarrativeGenerator;
@ -51,9 +49,9 @@ public class BundleTypeInResponseTest {
ourLog.info(responseContent);
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.getEntries().size());
assertEquals(BundleTypeEnum.SEARCHSET, bundle.getType().getValueAsEnum());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
assertEquals(BundleTypeEnum.SEARCHSET, bundle.getTypeElement().getValueAsEnum());
}

98
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/server/IncludeDstu2Test.java
View File

@ -22,7 +22,6 @@ import org.junit.Test;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.context.api.BundleInclusionRule;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.IResource;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.model.api.annotation.*;
@ -61,20 +60,21 @@ public class IncludeDstu2Test {
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
ourLog.info(responseContent);
assertEquals(3, bundle.size());
assertEquals(new IdDt("Patient/p1"), bundle.toListOfResources().get(0).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), bundle.toListOfResources().get(1).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), bundle.toListOfResources().get(2).getId().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntries().get(2).getSearchMode().getValueAsEnum());
assertEquals(3, bundle.getEntry().size());
Patient p1 = (Patient) bundle.toListOfResources().get(0);
assertEquals(new IdDt("Patient/p1"), BundleUtil.toListOfResources(ourCtx, bundle).get(0).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), BundleUtil.toListOfResources(ourCtx, bundle).get(1).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), BundleUtil.toListOfResources(ourCtx, bundle).get(2).getIdElement().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntry().get(2).getSearch().getModeElement().getValueAsEnum());
Patient p1 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(0);
assertEquals(0, p1.getContained().getContainedResources().size());
Patient p2 = (Patient) bundle.toListOfResources().get(1);
Patient p2 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(1);
assertEquals(0, p2.getContained().getContainedResources().size());
}
@ -87,22 +87,22 @@ public class IncludeDstu2Test {
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
ourLog.info(responseContent);
assertEquals(4, bundle.size());
assertEquals(new IdDt("Patient/p1"), bundle.toListOfResources().get(0).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), bundle.toListOfResources().get(1).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), bundle.toListOfResources().get(2).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o2"), bundle.toListOfResources().get(3).getId().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntries().get(2).getSearchMode().getValueAsEnum());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntries().get(3).getSearchMode().getValueAsEnum());
assertEquals(4, bundle.getEntry().size());
assertEquals(new IdDt("Patient/p1"), BundleUtil.toListOfResources(ourCtx, bundle).get(0).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), BundleUtil.toListOfResources(ourCtx, bundle).get(1).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), BundleUtil.toListOfResources(ourCtx, bundle).get(2).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o2"), BundleUtil.toListOfResources(ourCtx, bundle).get(3).getIdElement().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntry().get(2).getSearch().getModeElement().getValueAsEnum());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntry().get(3).getSearch().getModeElement().getValueAsEnum());
Patient p1 = (Patient) bundle.toListOfResources().get(0);
Patient p1 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(0);
assertEquals(0, p1.getContained().getContainedResources().size());
Patient p2 = (Patient) bundle.toListOfResources().get(1);
Patient p2 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(1);
assertEquals(0, p2.getContained().getContainedResources().size());
}
@ -115,20 +115,20 @@ public class IncludeDstu2Test {
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
ourLog.info(responseContent);
assertEquals(3, bundle.size());
assertEquals(new IdDt("Patient/p1"), bundle.toListOfResources().get(0).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), bundle.toListOfResources().get(1).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), bundle.toListOfResources().get(2).getId().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntries().get(2).getSearchMode().getValueAsEnum());
assertEquals(3, bundle.getEntry().size());
assertEquals(new IdDt("Patient/p1"), BundleUtil.toListOfResources(ourCtx, bundle).get(0).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), BundleUtil.toListOfResources(ourCtx, bundle).get(1).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), BundleUtil.toListOfResources(ourCtx, bundle).get(2).getIdElement().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntry().get(2).getSearch().getModeElement().getValueAsEnum());
Patient p1 = (Patient) bundle.toListOfResources().get(0);
Patient p1 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(0);
assertEquals(0, p1.getContained().getContainedResources().size());
Patient p2 = (Patient) bundle.toListOfResources().get(1);
Patient p2 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(1);
assertEquals(0, p2.getContained().getContainedResources().size());
}
@ -141,20 +141,20 @@ public class IncludeDstu2Test {
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newJsonParser().parseBundle(responseContent);
Bundle bundle = ourCtx.newJsonParser().parseResource(Bundle.class, responseContent);
ourLog.info(responseContent);
assertEquals(3, bundle.size());
assertEquals(new IdDt("Patient/p1"), bundle.toListOfResources().get(0).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), bundle.toListOfResources().get(1).getId().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), bundle.toListOfResources().get(2).getId().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntries().get(2).getSearchMode().getValueAsEnum());
assertEquals(3, bundle.getEntry().size());
assertEquals(new IdDt("Patient/p1"), BundleUtil.toListOfResources(ourCtx, bundle).get(0).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Patient/p2"), BundleUtil.toListOfResources(ourCtx, bundle).get(1).getIdElement().toUnqualifiedVersionless());
assertEquals(new IdDt("Organization/o1"), BundleUtil.toListOfResources(ourCtx, bundle).get(2).getIdElement().toUnqualifiedVersionless());
assertEquals(BundleEntrySearchModeEnum.INCLUDE, bundle.getEntry().get(2).getSearch().getModeElement().getValueAsEnum());
Patient p1 = (Patient) bundle.toListOfResources().get(0);
Patient p1 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(0);
assertEquals(0, p1.getContained().getContainedResources().size());
Patient p2 = (Patient) bundle.toListOfResources().get(1);
Patient p2 = (Patient) BundleUtil.toListOfResources(ourCtx, bundle).get(1);
assertEquals(0, p2.getContained().getContainedResources().size());
}
@ -169,8 +169,8 @@ public class IncludeDstu2Test {
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(4, bundle.size());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(4, bundle.getEntry().size());
}
@Test
@ -181,10 +181,10 @@ public class IncludeDstu2Test {
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.size());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = bundle.getResources(Patient.class).get(0);
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals(0, p.getName().size());
assertEquals("Hello", p.getId().getIdPart());
}
@ -200,10 +200,10 @@ public class IncludeDstu2Test {
ourLog.info(responseContent);
Bundle bundle = ourCtx.newJsonParser().parseBundle(responseContent);
assertEquals(1, bundle.size());
Bundle bundle = ourCtx.newJsonParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = bundle.getResources(Patient.class).get(0);
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals(1, p.getName().size());
assertEquals("Hello", p.getId().getIdPart());
assertEquals("foo", p.getName().get(0).getFamilyFirstRep().getValue());
@ -220,10 +220,10 @@ public class IncludeDstu2Test {
ourLog.info(responseContent);
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.size());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = bundle.getResources(Patient.class).get(0);
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals(1, p.getName().size());
assertEquals("Hello", p.getId().getIdPart());
assertEquals("foo", p.getName().get(0).getFamilyFirstRep().getValue());
@ -239,10 +239,10 @@ public class IncludeDstu2Test {
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseBundle(responseContent);
assertEquals(1, bundle.size());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = bundle.getResources(Patient.class).get(0);
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals(2, p.getName().size());
assertEquals("Hello", p.getId().getIdPart());

44
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/rest/server/ServerInvalidDefinitionDstu2Test.java
View File

@ -12,13 +12,7 @@ import org.junit.Test;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.primitive.StringDt;
import ca.uhn.fhir.rest.annotation.ConditionalUrlParam;
import ca.uhn.fhir.rest.annotation.Operation;
import ca.uhn.fhir.rest.annotation.OperationParam;
import ca.uhn.fhir.rest.annotation.ResourceParam;
import ca.uhn.fhir.rest.annotation.Update;
import ca.uhn.fhir.rest.annotation.Validate;
import ca.uhn.fhir.rest.annotation.*;
import ca.uhn.fhir.rest.api.MethodOutcome;
import ca.uhn.fhir.rest.param.TokenParam;
import ca.uhn.fhir.util.TestUtil;
@ -32,22 +26,6 @@ public class ServerInvalidDefinitionDstu2Test {
TestUtil.clearAllStaticFieldsForUnitTest();
}
@Test
public void testOperationReturningOldBundleProvider() {
RestfulServer srv = new RestfulServer(ourCtx);
srv.setFhirContext(ourCtx);
srv.setResourceProviders(new OperationReturningOldBundleProvider());
try {
srv.init();
fail();
} catch (ServletException e) {
assertThat(e.getCause().toString(), StringContains.containsString("ConfigurationException"));
assertThat(e.getCause().toString(), StringContains.containsString("Can not return a DSTU1 bundle"));
}
}
@Test
public void testWrongConditionalUrlType() {
RestfulServer srv = new RestfulServer(ourCtx);
@ -59,7 +37,8 @@ public class ServerInvalidDefinitionDstu2Test {
fail();
} catch (ServletException e) {
assertThat(e.getCause().toString(), StringContains.containsString("ConfigurationException"));
assertThat(e.getCause().toString(), StringContains.containsString("Parameters annotated with @ConditionalUrlParam must be of type String, found incorrect parameteter in method \"public ca.uhn.fhir.rest.api.MethodOutcome ca.uhn.fhir.rest.server.ServerInvalidDefinitionDstu2Test$UpdateWithWrongConditionalUrlType.update(ca.uhn.fhir.rest.param.TokenParam,ca.uhn.fhir.model.dstu2.resource.Patient)"));
assertThat(e.getCause().toString(), StringContains.containsString(
"Parameters annotated with @ConditionalUrlParam must be of type String, found incorrect parameteter in method \"public ca.uhn.fhir.rest.api.MethodOutcome ca.uhn.fhir.rest.server.ServerInvalidDefinitionDstu2Test$UpdateWithWrongConditionalUrlType.update(ca.uhn.fhir.rest.param.TokenParam,ca.uhn.fhir.model.dstu2.resource.Patient)"));
}
}
@ -74,7 +53,8 @@ public class ServerInvalidDefinitionDstu2Test {
fail();
} catch (ServletException e) {
assertThat(e.getCause().toString(), StringContains.containsString("ConfigurationException"));
assertThat(e.getCause().toString(), StringContains.containsString("Method 'update' is annotated with @ResourceParam but has a type that is not an implemtation of org.hl7.fhir.instance.model.api.IBaseResource or String or byte[]"));
assertThat(e.getCause().toString(), StringContains
.containsString("Method 'update' is annotated with @ResourceParam but has a type that is not an implemtation of org.hl7.fhir.instance.model.api.IBaseResource or String or byte[]"));
}
}
@ -108,20 +88,6 @@ public class ServerInvalidDefinitionDstu2Test {
}
}
public static class OperationReturningOldBundleProvider implements IResourceProvider {
@Override
public Class<? extends IBaseResource> getResourceType() {
return Patient.class;
}
@Operation(name = "$OP_TYPE_RET_OLD_BUNDLE")
public ca.uhn.fhir.model.api.Bundle opTypeRetOldBundle(@OperationParam(name = "PARAM1") StringDt theParam1, @OperationParam(name = "PARAM2") Patient theParam2) {
return null;
}
}
public static class UpdateWithWrongConditionalUrlType implements IResourceProvider {
@Override

49
hapi-fhir-structures-dstu2/src/test/java/ca/uhn/fhir/validation/ResourceValidatorDstu2Test.java
View File

@ -12,9 +12,7 @@ import static org.junit.Assert.fail;
import java.io.IOException;
import java.nio.charset.StandardCharsets;
import java.util.ArrayList;
import java.util.Date;
import java.util.List;
import java.util.*;
import org.apache.commons.io.IOUtils;
import org.hamcrest.core.StringContains;
@ -22,27 +20,12 @@ import org.junit.AfterClass;
import org.junit.Test;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.ExtensionDt;
import ca.uhn.fhir.model.api.ResourceMetadataKeyEnum;
import ca.uhn.fhir.model.api.TemporalPrecisionEnum;
import ca.uhn.fhir.model.dstu2.composite.CodeableConceptDt;
import ca.uhn.fhir.model.dstu2.composite.ResourceReferenceDt;
import ca.uhn.fhir.model.dstu2.composite.TimingDt;
import ca.uhn.fhir.model.dstu2.resource.Condition;
import ca.uhn.fhir.model.dstu2.resource.MedicationOrder;
import ca.uhn.fhir.model.dstu2.resource.OperationOutcome;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.dstu2.valueset.ConditionVerificationStatusEnum;
import ca.uhn.fhir.model.dstu2.valueset.ContactPointSystemEnum;
import ca.uhn.fhir.model.dstu2.valueset.NarrativeStatusEnum;
import ca.uhn.fhir.model.dstu2.valueset.UnitsOfTimeEnum;
import ca.uhn.fhir.model.primitive.DateDt;
import ca.uhn.fhir.model.primitive.InstantDt;
import ca.uhn.fhir.model.primitive.StringDt;
import ca.uhn.fhir.parser.DataFormatException;
import ca.uhn.fhir.parser.IParser;
import ca.uhn.fhir.parser.StrictErrorHandler;
import ca.uhn.fhir.model.api.*;
import ca.uhn.fhir.model.dstu2.composite.*;
import ca.uhn.fhir.model.dstu2.resource.*;
import ca.uhn.fhir.model.dstu2.valueset.*;
import ca.uhn.fhir.model.primitive.*;
import ca.uhn.fhir.parser.*;
import ca.uhn.fhir.parser.XmlParserDstu2Test.TestPatientFor327;
import ca.uhn.fhir.util.TestUtil;
import ca.uhn.fhir.validation.schematron.SchematronBaseValidator;
@ -102,13 +85,13 @@ public class ResourceValidatorDstu2Test {
@Test
public void testSchemaBundleValidator() throws IOException {
String res = IOUtils.toString(getClass().getClassLoader().getResourceAsStream("bundle-example.json"));
Bundle b = ourCtx.newJsonParser().parseBundle(res);
Bundle b = ourCtx.newJsonParser().parseResource(Bundle.class, res);
FhirValidator val = createFhirValidator();
val.validate(b);
MedicationOrder p = (MedicationOrder) b.getEntries().get(0).getResource();
MedicationOrder p = (MedicationOrder) b.getEntry().get(0).getResource();
TimingDt timing = new TimingDt();
timing.getRepeat().setDuration(123);
timing.getRepeat().setDurationUnits((UnitsOfTimeEnum) null);
@ -127,20 +110,26 @@ public class ResourceValidatorDstu2Test {
@Test
public void testSchemaBundleValidatorFails() throws IOException {
String res = IOUtils.toString(getClass().getClassLoader().getResourceAsStream("bundle-example.json"), StandardCharsets.UTF_8);
Bundle b = ourCtx.newJsonParser().parseBundle(res);
Bundle b = ourCtx.newJsonParser().parseResource(Bundle.class, res);
FhirValidator val = createFhirValidator();
ValidationResult validationResult = val.validateWithResult(b);
assertTrue(validationResult.isSuccessful());
MedicationOrder p = (MedicationOrder) b.getEntries().get(0).getResource();
MedicationOrder p = (MedicationOrder) b.getEntry().get(0).getResource();
TimingDt timing = new TimingDt();
timing.getRepeat().setDuration(123);
timing.getRepeat().setDurationUnits((UnitsOfTimeEnum) null);
p.getDosageInstructionFirstRep().setTiming(timing);
ourLog.info(ourCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(b));
validationResult = val.validateWithResult(b);
ourLog.info(ourCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(validationResult.toOperationOutcome()));
assertFalse(validationResult.isSuccessful());
String encoded = logOperationOutcome(validationResult);
@ -150,9 +139,9 @@ public class ResourceValidatorDstu2Test {
@Test
public void testSchemaBundleValidatorIsSuccessful() throws IOException {
String res = IOUtils.toString(getClass().getClassLoader().getResourceAsStream("bundle-example.json"), StandardCharsets.UTF_8);
Bundle b = ourCtx.newJsonParser().parseBundle(res);
Bundle b = ourCtx.newJsonParser().parseResource(Bundle.class, res);
ourLog.info(ourCtx.newXmlParser().setPrettyPrint(true).encodeBundleToString(b));
ourLog.info(ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(b));
FhirValidator val = createFhirValidator();

20
hapi-fhir-structures-dstu3/src/test/java/ca/uhn/fhir/rest/client/GenericClientDstu3Test.java
View File

@ -114,8 +114,13 @@ public class GenericClientDstu3Test {
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/EpisodeOfCare?patient=123&_revinclude=Encounter%3Aepisodeofcare&_revinclude%3Arecurse=Observation%3Aencounter",
capt.getAllValues().get(idx).getURI().toString());
String expected = "http://example.com/fhir/EpisodeOfCare?patient=123&_revinclude=Encounter%3Aepisodeofcare&_revinclude%3Arecurse=Observation%3Aencounter";
String actual = capt.getAllValues().get(idx).getURI().toString();
ourLog.info("EXP: {}", expected);
ourLog.info("ACT: {}", actual);
assertEquals(expected, actual);
idx++;
}
@ -1526,17 +1531,6 @@ public class GenericClientDstu3Test {
}
@Test
public void testSearchForUnknownType() throws Exception {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
try {
client.search(new UriDt("?aaaa"));
fail();
} catch (IllegalArgumentException e) {
assertEquals("Unable to determine the resource type from the given URI: ?aaaa", e.getMessage());
}
}
@Test
public void testSearchWithMultipleTokens() throws Exception {
ArgumentCaptor<HttpUriRequest> capt = prepareClientForSearchResponse();

38
hapi-fhir-structures-dstu3/src/test/java/ca/uhn/fhir/rest/param/DateRangeParamTest.java
View File

@ -67,9 +67,13 @@ public class DateRangeParamTest {
public void testDay() throws Exception {
assertEquals(parse("2011-01-01 00:00:00.0000"), create(">=2011-01-01", "<2011-01-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-02 00:00:00.0000"), create(">=2011-01-01", "<2011-01-02").getUpperBoundAsInstant());
assertEquals(parse("2011-01-02 00:00:00.0000"), create(">2011-01-01", "<=2011-01-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-03 00:00:00.0000"), create(">2011-01-01", "<=2011-01-02").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:00.0000"), create("ge2011-01-01", "lt2011-01-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-02 00:00:00.0000"), create("ge2011-01-01", "lt2011-01-02").getUpperBoundAsInstant());
assertEquals(parse("2011-01-02 00:00:00.0000"), create("gt2011-01-01", "le2011-01-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-03 00:00:00.0000"), create("gt2011-01-01", "le2011-01-02").getUpperBoundAsInstant());
}
@Test
@ -77,20 +81,20 @@ public class DateRangeParamTest {
assertEquals(parse("2011-01-01 00:00:00.0000"), create("2011-01-01").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-02 00:00:00.0000"), create("2011-01-01").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:00.0000"), create(">=2011-01-01").getLowerBoundAsInstant());
assertEquals(null, create(">=2011-01-01").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:00.0000"), create("ge2011-01-01").getLowerBoundAsInstant());
assertEquals(null, create("ge2011-01-01").getUpperBoundAsInstant());
assertEquals(null, create("<=2011-01-01").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-02 00:00:00.0000"), create("<=2011-01-01").getUpperBoundAsInstant());
assertEquals(null, create("le2011-01-01").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-02 00:00:00.0000"), create("le2011-01-01").getUpperBoundAsInstant());
}
@Test
public void testMonth() throws Exception {
assertEquals(parse("2011-01-01 00:00:00.0000"), create(">=2011-01", "<2011-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-02-01 00:00:00.0000"), create(">=2011-01", "<2011-02").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:00.0000"), create("ge2011-01", "lt2011-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-02-01 00:00:00.0000"), create("ge2011-01", "lt2011-02").getUpperBoundAsInstant());
assertEquals(parse("2011-02-01 00:00:00.0000"), create(">2011-01", "<=2011-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-03-01 00:00:00.0000"), create(">2011-01", "<=2011-02").getUpperBoundAsInstant());
assertEquals(parse("2011-02-01 00:00:00.0000"), create("gt2011-01", "le2011-02").getLowerBoundAsInstant());
assertEquals(parseM1("2011-03-01 00:00:00.0000"), create("gt2011-01", "le2011-02").getUpperBoundAsInstant());
}
@Test
@ -159,20 +163,20 @@ public class DateRangeParamTest {
@Test
public void testSecond() throws Exception {
assertEquals(parse("2011-01-01 00:00:00.0000"), create(">=2011-01-01T00:00:00", "<2011-01-01T01:00:00").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-01 02:00:00.0000"), create(">=2011-01-01T00:00:00", "<2011-01-01T02:00:00").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:00.0000"), create("ge2011-01-01T00:00:00", "lt2011-01-01T01:00:00").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-01 02:00:00.0000"), create("ge2011-01-01T00:00:00", "lt2011-01-01T02:00:00").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:01.0000"), create(">2011-01-01T00:00:00", "<=2011-01-01T02:00:00").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-01 02:00:01.0000"), create(">2011-01-01T00:00:00", "<=2011-01-01T02:00:00").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:01.0000"), create("gt2011-01-01T00:00:00", "le2011-01-01T02:00:00").getLowerBoundAsInstant());
assertEquals(parseM1("2011-01-01 02:00:01.0000"), create("gt2011-01-01T00:00:00", "le2011-01-01T02:00:00").getUpperBoundAsInstant());
}
@Test
public void testYear() throws Exception {
assertEquals(parse("2011-01-01 00:00:00.0000"), create(">=2011", "<2012").getLowerBoundAsInstant());
assertEquals(parseM1("2012-01-01 00:00:00.0000"), create(">=2011", "<2012").getUpperBoundAsInstant());
assertEquals(parse("2011-01-01 00:00:00.0000"), create("ge2011", "lt2012").getLowerBoundAsInstant());
assertEquals(parseM1("2012-01-01 00:00:00.0000"), create("ge2011", "lt2012").getUpperBoundAsInstant());
assertEquals(parse("2012-01-01 00:00:00.0000"), create(">2011", "<=2012").getLowerBoundAsInstant());
assertEquals(parseM1("2014-01-01 00:00:00.0000"), create(">2011", "<=2013").getUpperBoundAsInstant());
assertEquals(parse("2012-01-01 00:00:00.0000"), create("gt2011", "le2012").getLowerBoundAsInstant());
assertEquals(parseM1("2014-01-01 00:00:00.0000"), create("gt2011", "le2013").getUpperBoundAsInstant());
}
@AfterClass

66
hapi-fhir-structures-hl7org-dstu2/src/test/java/ca/uhn/fhir/parser/JsonParserHl7OrgDstu2Test.java
View File

@ -1286,72 +1286,6 @@ public class JsonParserHl7OrgDstu2Test {
}
@Test
public void testTagList() {
//@formatter:off
String tagListStr = "{\n" +
" \"resourceType\" : \"TagList\", " +
" \"category\" : [" +
" { " +
" \"term\" : \"term0\", " +
" \"label\" : \"label0\", " +
" \"scheme\" : \"scheme0\" " +
" }," +
" { " +
" \"term\" : \"term1\", " +
" \"label\" : \"label1\", " +
" \"scheme\" : null " +
" }," +
" { " +
" \"term\" : \"term2\", " +
" \"label\" : \"label2\" " +
" }" +
" ] " +
"}";
//@formatter:on
TagList tagList = ourCtx.newJsonParser().parseTagList(tagListStr);
assertEquals(3, tagList.size());
assertEquals("term0", tagList.get(0).getTerm());
assertEquals("label0", tagList.get(0).getLabel());
assertEquals("scheme0", tagList.get(0).getScheme());
assertEquals("term1", tagList.get(1).getTerm());
assertEquals("label1", tagList.get(1).getLabel());
assertEquals(null, tagList.get(1).getScheme());
assertEquals("term2", tagList.get(2).getTerm());
assertEquals("label2", tagList.get(2).getLabel());
assertEquals(null, tagList.get(2).getScheme());
/*
* Encode
*/
//@formatter:off
String expected = "{" +
"\"resourceType\":\"TagList\"," +
"\"category\":[" +
"{" +
"\"term\":\"term0\"," +
"\"label\":\"label0\"," +
"\"scheme\":\"scheme0\"" +
"}," +
"{" +
"\"term\":\"term1\"," +
"\"label\":\"label1\"" +
"}," +
"{" +
"\"term\":\"term2\"," +
"\"label\":\"label2\"" +
"}" +
"]" +
"}";
//@formatter:on
String encoded = ourCtx.newJsonParser().encodeTagListToString(tagList);
assertEquals(expected, encoded);
}
@ResourceDef(name = "Patient")
public static class MyPatientWithOneDeclaredAddressExtension extends Patient {

981
hapi-fhir-structures-hl7org-dstu2/src/test/java/ca/uhn/fhir/rest/client/GenericClientDstu2Hl7OrgTest.java
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File diff suppressed because it is too large Load Diff

56
hapi-fhir-structures-hl7org-dstu2/src/test/java/ca/uhn/fhir/rest/server/ServerInvalidDefinitionHl7OrgDstu2Test.java
View File

@ -1,56 +0,0 @@
package ca.uhn.fhir.rest.server;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.fail;
import javax.servlet.ServletException;
import org.hamcrest.core.StringContains;
import org.hl7.fhir.instance.model.Patient;
import org.hl7.fhir.instance.model.StringType;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.junit.Test;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.rest.annotation.Operation;
import ca.uhn.fhir.rest.annotation.OperationParam;
public class ServerInvalidDefinitionHl7OrgDstu2Test {
private static FhirContext ourCtx = FhirContext.forDstu2Hl7Org();
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory
.getLogger(ServerInvalidDefinitionHl7OrgDstu2Test.class);
@Test
public void testOperationReturningOldBundleProvider() {
RestfulServer srv = new RestfulServer(ourCtx);
srv.setFhirContext(ourCtx);
srv.setResourceProviders(new OperationReturningOldBundleProvider());
try {
srv.init();
fail();
} catch (ServletException e) {
ourLog.info(e.getCause().toString());
assertThat(e.getCause().toString(), StringContains.containsString("ConfigurationException"));
assertThat(e.getCause().toString(), StringContains.containsString("Can not return a DSTU1 bundle"));
}
}
public static class OperationReturningOldBundleProvider implements IResourceProvider {
@Override
public Class<? extends IBaseResource> getResourceType() {
return Patient.class;
}
@Operation(name = "$OP_TYPE_RET_OLD_BUNDLE")
public ca.uhn.fhir.model.api.Bundle opTypeRetOldBundle(@OperationParam(name = "PARAM1") StringType theParam1,
@OperationParam(name = "PARAM2") Patient theParam2) {
return null;
}
}
}

5
hapi-fhir-structures-r4/src/main/java/org/hl7/fhir/r4/hapi/rest/server/R4BundleFactory.java
View File

@ -264,11 +264,6 @@ public class R4BundleFactory implements IVersionSpecificBundleFactory {
}
}
@Override
public ca.uhn.fhir.model.api.Bundle getDstu1Bundle() {
return null;
}
@Override
public IBaseResource getResourceBundle() {
return myBundle;

624
hapi-fhir-structures-r4/src/test/java/ca/uhn/fhir/rest/client/GenericClientR4Test.java
View File

@ -2,7 +2,13 @@ package ca.uhn.fhir.rest.client;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.startsWith;
import static org.junit.Assert.*;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.fail;
import static org.mockito.Mockito.mock;
import static org.mockito.Mockito.when;
@ -33,8 +39,10 @@ import com.phloc.commons.io.streams.StringInputStream;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.context.FhirVersionEnum;
import ca.uhn.fhir.model.api.IQueryParameterType;
import ca.uhn.fhir.model.api.TemporalPrecisionEnum;
import ca.uhn.fhir.model.primitive.*;
import ca.uhn.fhir.model.primitive.DateTimeDt;
import ca.uhn.fhir.model.primitive.StringDt;
import ca.uhn.fhir.parser.CustomTypeR4Test;
import ca.uhn.fhir.parser.CustomTypeR4Test.MyCustomPatient;
import ca.uhn.fhir.parser.IParser;
@ -47,6 +55,7 @@ import ca.uhn.fhir.rest.client.exceptions.NonFhirResponseException;
import ca.uhn.fhir.rest.client.impl.BaseClient;
import ca.uhn.fhir.rest.client.interceptor.CookieInterceptor;
import ca.uhn.fhir.rest.client.interceptor.UserInfoInterceptor;
import ca.uhn.fhir.rest.param.DateParam;
import ca.uhn.fhir.rest.param.ParamPrefixEnum;
import ca.uhn.fhir.rest.server.exceptions.NotImplementedOperationException;
import ca.uhn.fhir.rest.server.exceptions.UnclassifiedServerFailureException;
@ -99,272 +108,6 @@ public class GenericClientR4Test {
return capt;
}
@Test
public void testRevIncludeRecursive() throws ClientProtocolException, IOException {
ArgumentCaptor<HttpUriRequest> capt = prepareClientForSearchResponse();
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
client.search()
.forResource(EpisodeOfCare.class)
.where(EpisodeOfCare.PATIENT.hasId("123"))
.revInclude(Encounter.INCLUDE_EPISODEOFCARE)
.revInclude(Observation.INCLUDE_ENCOUNTER.asRecursive())
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/EpisodeOfCare?patient=123&_revinclude=Encounter%3Aepisodeofcare&_revinclude%3Arecurse=Observation%3Aencounter",
capt.getAllValues().get(idx).getURI().toString());
idx++;
}
@Test
public void testPatchJsonByIdString() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.withId("Patient/123")
.execute();
assertEquals("http://example.com/fhir/Patient/123", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByIdType() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.withId(new IdType("http://localhost/fhir/Patient/123/_history/234"))
.execute();
assertEquals("http://example.com/fhir/Patient/123", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByConditionalString() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.conditionalByUrl("Patient?foo=bar")
.execute();
assertEquals("http://example.com/fhir/Patient?foo=bar", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByConditionalParam() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.conditional("Patient").where(Patient.NAME.matches().value("TEST"))
.and(Patient.FAMILY.matches().value("TEST2"))
.execute();
assertEquals("http://example.com/fhir/Patient?name=TEST&family=TEST2", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByConditionalParamResourceType() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.conditional(Patient.class).where(Patient.NAME.matches().value("TEST"))
.and(Patient.FAMILY.matches().value("TEST2"))
.execute();
assertEquals("http://example.com/fhir/Patient?name=TEST&family=TEST2", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchXmlByIdString() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><diff xmlns:fhir=\"http://hl7.org/fhir\"><replace sel=\"fhir:Patient/fhir:active/@value\">false</replace></diff>";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.withId("Patient/123")
.execute();
assertEquals("http://example.com/fhir/Patient/123", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_XML_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchInvalid() throws Exception {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
try {
client
.patch()
.withBody("AA")
.withId("Patient/123")
.execute();
} catch (IllegalArgumentException e) {
assertEquals("Unable to determine encoding of patch", e.getMessage());
}
}
@Test
public void testAcceptHeaderWithEncodingSpecified() throws Exception {
final String msg = "{\"resourceType\":\"Bundle\",\"id\":null,\"base\":\"http://localhost:57931/fhir/contextDev\",\"total\":1,\"link\":[{\"relation\":\"self\",\"url\":\"http://localhost:57931/fhir/contextDev/Patient?identifier=urn%3AMultiFhirVersionTest%7CtestSubmitPatient01&_format=json\"}],\"entry\":[{\"resource\":{\"resourceType\":\"Patient\",\"id\":\"1\",\"meta\":{\"versionId\":\"1\",\"lastUpdated\":\"2014-12-20T18:41:29.706-05:00\"},\"identifier\":[{\"system\":\"urn:MultiFhirVersionTest\",\"value\":\"testSubmitPatient01\"}]}}]}";
@ -923,18 +666,6 @@ public class GenericClientR4Test {
}
@SuppressWarnings("deprecation")
@Test
public void testInvalidConformanceCall() {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
try {
client.conformance();
fail();
} catch (IllegalArgumentException e) {
assertEquals("Must call fetchConformance() instead of conformance() for RI/STU3+ structures", e.getMessage());
}
}
/**
* See #150
*/
@ -980,6 +711,251 @@ public class GenericClientR4Test {
}
@Test
public void testPatchInvalid() throws Exception {
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
try {
client
.patch()
.withBody("AA")
.withId("Patient/123")
.execute();
} catch (IllegalArgumentException e) {
assertEquals("Unable to determine encoding of patch", e.getMessage());
}
}
@Test
public void testPatchJsonByConditionalParam() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.conditional("Patient").where(Patient.NAME.matches().value("TEST"))
.and(Patient.FAMILY.matches().value("TEST2"))
.execute();
assertEquals("http://example.com/fhir/Patient?name=TEST&family=TEST2", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByConditionalParamResourceType() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.conditional(Patient.class).where(Patient.NAME.matches().value("TEST"))
.and(Patient.FAMILY.matches().value("TEST2"))
.execute();
assertEquals("http://example.com/fhir/Patient?name=TEST&family=TEST2", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByConditionalString() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.conditionalByUrl("Patient?foo=bar")
.execute();
assertEquals("http://example.com/fhir/Patient?foo=bar", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByIdString() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.withId("Patient/123")
.execute();
assertEquals("http://example.com/fhir/Patient/123", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchJsonByIdType() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "[ { \"op\":\"replace\", \"path\":\"/active\", \"value\":false } ]";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.withId(new IdType("http://localhost/fhir/Patient/123/_history/234"))
.execute();
assertEquals("http://example.com/fhir/Patient/123", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_JSON_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPatchXmlByIdString() throws Exception {
OperationOutcome conf = new OperationOutcome();
conf.getText().setDivAsString("OK!");
final String respString = ourCtx.newJsonParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(respString), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
String patch = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><diff xmlns:fhir=\"http://hl7.org/fhir\"><replace sel=\"fhir:Patient/fhir:active/@value\">false</replace></diff>";
MethodOutcome outcome = client
.patch()
.withBody(patch)
.withId("Patient/123")
.execute();
assertEquals("http://example.com/fhir/Patient/123", UrlUtil.unescape(capt.getAllValues().get(idx).getURI().toString()));
assertEquals("PATCH", capt.getAllValues().get(0).getRequestLine().getMethod());
assertEquals(patch, extractBodyAsString(capt));
assertEquals(Constants.CT_XML_PATCH, capt.getAllValues().get(idx).getFirstHeader("Content-Type").getValue().replaceAll(";.*", ""));
idx++;
OperationOutcome oo = (OperationOutcome) outcome.getOperationOutcome();
assertThat(oo.getText().getDivAsString(), containsString("OK!"));
}
@Test
public void testPutDoesntForceAllIdsJson() throws Exception {
IParser p = ourCtx.newJsonParser();
@ -1152,33 +1128,24 @@ public class GenericClientR4Test {
}
@Test
public void testSearchWithNullParameters() throws Exception {
final String msg = "{\"resourceType\":\"Bundle\",\"id\":null,\"base\":\"http://localhost:57931/fhir/contextDev\",\"total\":1,\"link\":[{\"relation\":\"self\",\"url\":\"http://localhost:57931/fhir/contextDev/Patient?identifier=urn%3AMultiFhirVersionTest%7CtestSubmitPatient01&_format=json\"}],\"entry\":[{\"resource\":{\"resourceType\":\"Patient\",\"id\":\"1\",\"meta\":{\"versionId\":\"1\",\"lastUpdated\":\"2014-12-20T18:41:29.706-05:00\"},\"identifier\":[{\"system\":\"urn:MultiFhirVersionTest\",\"value\":\"testSubmitPatient01\"}]}}]}";
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(msg), Charset.forName("UTF-8"));
}
});
public void testRevIncludeRecursive() throws ClientProtocolException, IOException {
ArgumentCaptor<HttpUriRequest> capt = prepareClientForSearchResponse();
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
DateTimeDt now = DateTimeDt.withCurrentTime();
String dateString = now.getValueAsString().substring(0, 10);
client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value((String) null))
.forResource(EpisodeOfCare.class)
.where(EpisodeOfCare.PATIENT.hasId("123"))
.revInclude(Encounter.INCLUDE_EPISODEOFCARE)
.revInclude(Observation.INCLUDE_ENCOUNTER.asRecursive())
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient", capt.getAllValues().get(idx).getURI().toString());
assertEquals("http://example.com/fhir/EpisodeOfCare?patient=123&_revinclude=Encounter%3Aepisodeofcare&_revinclude%3Arecurse=Observation%3Aencounter",
capt.getAllValues().get(idx).getURI().toString());
idx++;
}
@Test
@ -1530,14 +1497,29 @@ public class GenericClientR4Test {
}
@Test
public void testSearchForUnknownType() throws Exception {
public void testSearchWithMap() throws Exception {
String msg = "{\"resourceType\":\"Bundle\",\"id\":null,\"base\":\"http://localhost:57931/fhir/contextDev\",\"total\":1,\"link\":[{\"relation\":\"self\",\"url\":\"http://localhost:57931/fhir/contextDev/Patient?identifier=urn%3AMultiFhirVersionTest%7CtestSubmitPatient01&_format=json\"}],\"entry\":[{\"resource\":{\"resourceType\":\"Patient\",\"id\":\"1\",\"meta\":{\"versionId\":\"1\",\"lastUpdated\":\"2014-12-20T18:41:29.706-05:00\"},\"identifier\":[{\"system\":\"urn:MultiFhirVersionTest\",\"value\":\"testSubmitPatient01\"}]}}]}";
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).thenReturn(new ReaderInputStream(new StringReader(msg), Charset.forName("UTF-8")));
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
try {
client.search(new UriDt("?aaaa"));
fail();
} catch (IllegalArgumentException e) {
assertEquals("Unable to determine the resource type from the given URI: ?aaaa", e.getMessage());
}
HashMap<String, List<IQueryParameterType>> params = new HashMap<String, List<IQueryParameterType>>();
params.put("foo", Arrays.asList((IQueryParameterType) new DateParam("2001")));
Bundle response = client
.search()
.forResource(Patient.class)
.where(params)
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient?foo=2001", capt.getValue().getURI().toString());
assertEquals(Patient.class, response.getEntry().get(0).getResource().getClass());
}
@Test
@ -1561,6 +1543,36 @@ public class GenericClientR4Test {
}
@Test
public void testSearchWithNullParameters() throws Exception {
final String msg = "{\"resourceType\":\"Bundle\",\"id\":null,\"base\":\"http://localhost:57931/fhir/contextDev\",\"total\":1,\"link\":[{\"relation\":\"self\",\"url\":\"http://localhost:57931/fhir/contextDev/Patient?identifier=urn%3AMultiFhirVersionTest%7CtestSubmitPatient01&_format=json\"}],\"entry\":[{\"resource\":{\"resourceType\":\"Patient\",\"id\":\"1\",\"meta\":{\"versionId\":\"1\",\"lastUpdated\":\"2014-12-20T18:41:29.706-05:00\"},\"identifier\":[{\"system\":\"urn:MultiFhirVersionTest\",\"value\":\"testSubmitPatient01\"}]}}]}";
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
when(myHttpResponse.getStatusLine()).thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType()).thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_JSON + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent()).then(new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(new StringReader(msg), Charset.forName("UTF-8"));
}
});
IGenericClient client = ourCtx.newRestfulGenericClient("http://example.com/fhir");
int idx = 0;
DateTimeDt now = DateTimeDt.withCurrentTime();
String dateString = now.getValueAsString().substring(0, 10);
client.search()
.forResource("Patient")
.where(Patient.NAME.matches().value((String) null))
.returnBundle(Bundle.class)
.execute();
assertEquals("http://example.com/fhir/Patient", capt.getAllValues().get(idx).getURI().toString());
idx++;
}
/**
* See #371
*/

654
hapi-fhir-structures-r4/src/test/java/ca/uhn/fhir/rest/server/SearchSearchServerDstu1Test.java Normal file
View File

@ -0,0 +1,654 @@
package ca.uhn.fhir.rest.server;
import static ca.uhn.fhir.util.UrlUtil.escape;
import static org.hamcrest.Matchers.containsInAnyOrder;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.startsWith;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.assertTrue;
import java.util.*;
import java.util.concurrent.TimeUnit;
import org.apache.commons.io.IOUtils;
import org.apache.http.*;
import org.apache.http.client.entity.UrlEncodedFormEntity;
import org.apache.http.client.methods.*;
import org.apache.http.entity.ByteArrayEntity;
import org.apache.http.impl.client.CloseableHttpClient;
import org.apache.http.impl.client.HttpClientBuilder;
import org.apache.http.impl.conn.PoolingHttpClientConnectionManager;
import org.apache.http.message.BasicNameValuePair;
import org.eclipse.jetty.server.Server;
import org.eclipse.jetty.servlet.ServletHandler;
import org.eclipse.jetty.servlet.ServletHolder;
import org.hl7.fhir.r4.model.*;
import org.junit.*;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.narrative.DefaultThymeleafNarrativeGenerator;
import ca.uhn.fhir.rest.annotation.*;
import ca.uhn.fhir.rest.api.MethodOutcome;
import ca.uhn.fhir.rest.client.api.IGenericClient;
import ca.uhn.fhir.rest.param.*;
import ca.uhn.fhir.util.*;
public class SearchSearchServerDstu1Test {
private static CloseableHttpClient ourClient;
private static FhirContext ourCtx = FhirContext.forR4();
private static IServerAddressStrategy ourDefaultAddressStrategy;
private static StringAndListParam ourLastAndList;
private static Set<Include> ourLastIncludes;
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(SearchSearchServerDstu1Test.class);
private static int ourPort;
private static Server ourServer;
private static RestfulServer ourServlet;
@Before
public void before() {
ourServlet.setServerAddressStrategy(ourDefaultAddressStrategy);
ourLastIncludes = null;
ourLastAndList = null;
}
@Test
public void testEncodeConvertsReferencesToRelative() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchWithRef");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
Patient patient = (Patient) ourCtx.newXmlParser().parseResource(Bundle.class, responseContent).getEntry().get(0).getResource();
String ref = patient.getManagingOrganization().getReference();
assertEquals("Organization/555", ref);
}
/**
* Try loading the page as a POST just to make sure we get the right error
*/
@Test
public void testGetPagesWithPost() throws Exception {
HttpPost httpPost = new HttpPost("http://localhost:" + ourPort);
List<? extends NameValuePair> parameters = Collections.singletonList(new BasicNameValuePair("_getpages", "AAA"));
httpPost.setEntity(new UrlEncodedFormEntity(parameters));
CloseableHttpResponse status = ourClient.execute(httpPost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(400, status.getStatusLine().getStatusCode());
// assertThat(responseContent, containsString("Requests for _getpages must use HTTP GET"));
}
@Test
public void testOmitEmptyOptionalParam() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_id=");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals(null, p.getNameFirstRep().getFamily());
}
@Test
public void testParseEscapedValues() throws Exception {
StringBuilder b = new StringBuilder();
b.append("http://localhost:");
b.append(ourPort);
b.append("/Patient?");
b.append(escape("findPatientWithAndList")).append('=').append(escape("NE\\,NE,NE\\,NE")).append('&');
b.append(escape("findPatientWithAndList")).append('=').append(escape("NE\\\\NE")).append('&');
b.append(escape("findPatientWithAndList:exact")).append('=').append(escape("E\\$E")).append('&');
b.append(escape("findPatientWithAndList:exact")).append('=').append(escape("E\\|E")).append('&');
HttpGet httpGet = new HttpGet(b.toString());
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals(4, ourLastAndList.getValuesAsQueryTokens().size());
assertEquals(2, ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().size());
assertFalse(ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().get(0).isExact());
assertEquals("NE,NE", ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().get(0).getValue());
assertEquals("NE,NE", ourLastAndList.getValuesAsQueryTokens().get(0).getValuesAsQueryTokens().get(1).getValue());
assertEquals("NE\\NE", ourLastAndList.getValuesAsQueryTokens().get(1).getValuesAsQueryTokens().get(0).getValue());
assertTrue(ourLastAndList.getValuesAsQueryTokens().get(2).getValuesAsQueryTokens().get(0).isExact());
assertEquals("E$E", ourLastAndList.getValuesAsQueryTokens().get(2).getValuesAsQueryTokens().get(0).getValue());
assertEquals("E|E", ourLastAndList.getValuesAsQueryTokens().get(3).getValuesAsQueryTokens().get(0).getValue());
}
@Test
public void testReturnLinks() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=findWithLinks");
CloseableHttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(10, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue());
}
/**
* #149
*/
@Test
public void testReturnLinksWithAddressStrategy() throws Exception {
ourServlet.setServerAddressStrategy(new HardcodedServerAddressStrategy("https://blah.com/base"));
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=findWithLinks");
CloseableHttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
ourLog.info(responseContent);
assertEquals(10, bundle.getEntry().size());
assertEquals("https://blah.com/base/Patient?_query=findWithLinks", bundle.getLink("self").getUrl());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue());
String linkNext = bundle.getLink("next").getUrl();
ourLog.info(linkNext);
assertThat(linkNext, startsWith("https://blah.com/base?_getpages="));
/*
* Load the second page
*/
String urlPart = linkNext.substring(linkNext.indexOf('?'));
String link = "http://localhost:" + ourPort + urlPart;
httpGet = new HttpGet(link);
status = ourClient.execute(httpGet);
responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
ourLog.info(responseContent);
assertEquals(10, bundle.getEntry().size());
assertEquals(linkNext, bundle.getLink("self").getUrl());
p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue());
}
@Test
public void testSearchById() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_id=aaa");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamily());
}
@Test
public void testSearchByIdUsingClient() throws Exception {
IGenericClient client = ourCtx.newRestfulGenericClient("http://localhost:" + ourPort);
Bundle bundle = client
.search()
.forResource("Patient")
.where(BaseResource.RES_ID.exactly().code("aaa"))
.returnBundle(Bundle.class)
.execute();
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamily());
}
@Test
public void testSearchByPost() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient/_search");
// add parameters to the post method
List<NameValuePair> parameters = new ArrayList<NameValuePair>();
parameters.add(new BasicNameValuePair("_id", "aaa"));
UrlEncodedFormEntity sendentity = new UrlEncodedFormEntity(parameters, "UTF-8");
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamily());
}
/**
* See #164
*/
@Test
public void testSearchByPostWithInvalidPostUrl() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient?name=Central"); // should end with
// _search
// add parameters to the post method
List<NameValuePair> parameters = new ArrayList<NameValuePair>();
parameters.add(new BasicNameValuePair("_id", "aaa"));
UrlEncodedFormEntity sendentity = new UrlEncodedFormEntity(parameters, "UTF-8");
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(400, status.getStatusLine().getStatusCode());
assertThat(responseContent, containsString(
"<diagnostics value=\"Incorrect Content-Type header value of &quot;application/x-www-form-urlencoded; charset=UTF-8&quot; was provided in the request. A FHIR Content-Type is required for &quot;CREATE&quot; operation\"/>"));
}
/**
* See #164
*/
@Test
public void testSearchByPostWithMissingContentType() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient?name=Central"); // should end with
// _search
HttpEntity sendentity = new ByteArrayEntity(new byte[] { 1, 2, 3, 4 });
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(400, status.getStatusLine().getStatusCode());
assertThat(responseContent, containsString("<diagnostics value=\"No Content-Type header was provided in the request. This is required for &quot;CREATE&quot; operation\"/>"));
}
/**
* See #164
*/
@Test
public void testSearchByPostWithParamsInBodyAndUrl() throws Exception {
HttpPost filePost = new HttpPost("http://localhost:" + ourPort + "/Patient/_search?name=Central");
// add parameters to the post method
List<NameValuePair> parameters = new ArrayList<NameValuePair>();
parameters.add(new BasicNameValuePair("_id", "aaa"));
UrlEncodedFormEntity sendentity = new UrlEncodedFormEntity(parameters, "UTF-8");
filePost.setEntity(sendentity);
HttpResponse status = ourClient.execute(filePost);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
ourLog.info(responseContent);
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("idaaa", p.getName().get(0).getFamily());
assertEquals("nameCentral", p.getName().get(1).getGiven().get(0).getValue());
}
@Test
public void testSearchCompartment() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient/123/fooCompartment");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
ourLog.info(responseContent);
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("fooCompartment", p.getIdentifierFirstRep().getValue());
assertThat(bundle.getEntry().get(0).getResource().getIdElement().getValue(), containsString("Patient/123"));
}
@Test
public void testSearchGetWithUnderscoreSearch() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Observation/_search?subject%3APatient=100&name=3141-9%2C8302-2%2C8287-5%2C39156-5");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Observation p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Observation.class).get(0);
assertEquals("Patient/100", p.getSubject().getReference().toString());
assertEquals(4, p.getCode().getCoding().size());
assertEquals("3141-9", p.getCode().getCoding().get(0).getCode());
assertEquals("8302-2", p.getCode().getCoding().get(1).getCode());
}
@Test
public void testSearchIncludesParametersIncludes() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchIncludes&_include=foo&_include:recurse=bar");
CloseableHttpResponse status = ourClient.execute(httpGet);
IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals(2, ourLastIncludes.size());
assertThat(ourLastIncludes, containsInAnyOrder(new Include("foo", false), new Include("bar", true)));
}
@Test
public void testSearchIncludesParametersIncludesList() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchIncludesList&_include=foo&_include:recurse=bar");
CloseableHttpResponse status = ourClient.execute(httpGet);
IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals(2, ourLastIncludes.size());
assertThat(ourLastIncludes, containsInAnyOrder(new Include("foo", false), new Include("bar", true)));
}
@Test
public void testSearchIncludesParametersNone() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=searchIncludes");
CloseableHttpResponse status = ourClient.execute(httpGet);
IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
assertThat(ourLastIncludes, empty());
}
@Test
public void testSearchWithOrList() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?findPatientWithOrList=aaa,bbb");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("aaa", p.getIdentifier().get(0).getValue());
assertEquals("bbb", p.getIdentifier().get(1).getValue());
}
@Test
public void testSearchWithTokenParameter() throws Exception {
String token = UrlUtil.escape("http://www.dmix.gov/vista/2957|301");
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?tokenParam=" + token);
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("http://www.dmix.gov/vista/2957", p.getNameFirstRep().getFamily());
assertEquals("301", p.getNameFirstRep().getGivenAsSingleString());
}
@Test
public void testSpecificallyNamedQueryGetsPrecedence() throws Exception {
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?AAA=123");
HttpResponse status = ourClient.execute(httpGet);
String responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
Bundle bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
Patient p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("AAA", p.getIdentifierFirstRep().getValue());
// Now the named query
httpGet = new HttpGet("http://localhost:" + ourPort + "/Patient?_query=findPatientByAAA&AAA=123");
status = ourClient.execute(httpGet);
responseContent = IOUtils.toString(status.getEntity().getContent());
IOUtils.closeQuietly(status.getEntity().getContent());
assertEquals(200, status.getStatusLine().getStatusCode());
bundle = ourCtx.newXmlParser().parseResource(Bundle.class, responseContent);
assertEquals(1, bundle.getEntry().size());
p = BundleUtil.toListOfResourcesOfType(ourCtx, bundle, Patient.class).get(0);
assertEquals("AAANamed", p.getIdentifierFirstRep().getValue());
}
@AfterClass
public static void afterClassClearContext() throws Exception {
ourServer.stop();
TestUtil.clearAllStaticFieldsForUnitTest();
}
@BeforeClass
public static void beforeClass() throws Exception {
ourPort = PortUtil.findFreePort();
ourServer = new Server(ourPort);
DummyPatientResourceProvider patientProvider = new DummyPatientResourceProvider();
ServletHandler proxyHandler = new ServletHandler();
ourServlet = new RestfulServer(ourCtx);
ourServlet.getFhirContext().setNarrativeGenerator(new DefaultThymeleafNarrativeGenerator());
ourServlet.setPagingProvider(new FifoMemoryPagingProvider(10).setDefaultPageSize(10));
ourServlet.setResourceProviders(patientProvider, new DummyObservationResourceProvider());
ServletHolder servletHolder = new ServletHolder(ourServlet);
proxyHandler.addServletWithMapping(servletHolder, "/*");
ourServer.setHandler(proxyHandler);
ourServer.start();
PoolingHttpClientConnectionManager connectionManager = new PoolingHttpClientConnectionManager(5000, TimeUnit.MILLISECONDS);
HttpClientBuilder builder = HttpClientBuilder.create();
builder.setConnectionManager(connectionManager);
ourClient = builder.build();
ourDefaultAddressStrategy = ourServlet.getServerAddressStrategy();
}
public static class DummyObservationResourceProvider implements IResourceProvider {
@Override
public Class<Observation> getResourceType() {
return Observation.class;
}
@Search
public Observation search(@RequiredParam(name = "subject") ReferenceParam theSubject, @RequiredParam(name = "name") TokenOrListParam theName) {
Observation o = new Observation();
o.setId("1");
o.getSubject().setReference(theSubject.getResourceType() + "/" + theSubject.getIdPart());
for (TokenParam next : theName.getValuesAsQueryTokens()) {
o.getCode().addCoding().setSystem(next.getSystem()).setCode(next.getValue());
}
return o;
}
}
public static class DummyPatientResourceProvider implements IResourceProvider {
@Search(compartmentName = "fooCompartment")
public List<Patient> compartment(@IdParam IdType theId) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId(theId);
patient.addIdentifier().setSystem("system").setValue("fooCompartment");
retVal.add(patient);
return retVal;
}
/**
* Only needed for #164
*/
@Create
public MethodOutcome create(@ResourceParam Patient thePatient) {
throw new IllegalArgumentException();
}
@Search
public List<Patient> findPatient(@RequiredParam(name = "_id") StringParam theParam, @OptionalParam(name = "name") StringParam theName) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addIdentifier().setSystem("system").setValue("identifier123");
if (theParam != null) {
patient.addName().setFamily("id" + theParam.getValue());
if (theName != null) {
patient.addName().addGiven("name" + theName.getValue());
}
}
retVal.add(patient);
return retVal;
}
@Search
public List<Patient> findPatientByAAA01(@RequiredParam(name = "AAA") StringParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addIdentifier().setSystem("system").setValue("AAA");
retVal.add(patient);
return retVal;
}
@Search(queryName = "findPatientByAAA")
public List<Patient> findPatientByAAA02Named(@OptionalParam(name = "AAA") StringParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addIdentifier().setSystem("system").setValue( "AAANamed");
retVal.add(patient);
return retVal;
}
@Search()
public List<Patient> findPatientWithAndList(@RequiredParam(name = "findPatientWithAndList") StringAndListParam theParam) {
ourLastAndList = theParam;
ArrayList<Patient> retVal = new ArrayList<Patient>();
return retVal;
}
@Search()
public List<Patient> findPatientWithOrList(@RequiredParam(name = "findPatientWithOrList") StringOrListParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
for (StringParam next : theParam.getValuesAsQueryTokens()) {
patient.addIdentifier().setSystem("system").setValue( next.getValue());
}
retVal.add(patient);
return retVal;
}
@Search()
public List<Patient> findPatientWithToken(@RequiredParam(name = "tokenParam") TokenParam theParam) {
ArrayList<Patient> retVal = new ArrayList<Patient>();
Patient patient = new Patient();
patient.setId("1");
patient.addName().setFamily(theParam.getSystem()).addGiven(theParam.getValue());
retVal.add(patient);
return retVal;
}
@Search(queryName = "findWithLinks")
public List<Patient> findWithLinks() {
ArrayList<Patient> retVal = new ArrayList<Patient>();
for (int i = 1; i <= 20; i++) {
Patient patient = new Patient();
patient.setId("" + i);
patient.addIdentifier().setSystem("system").setValue( "AAANamed");
retVal.add(patient);
}
return retVal;
}
@Override
public Class<Patient> getResourceType() {
return Patient.class;
}
@Search(queryName = "searchIncludes")
public List<Patient> searchIncludes(@IncludeParam Set<Include> theIncludes) {
ourLastIncludes = theIncludes;
ArrayList<Patient> retVal = new ArrayList<Patient>();
return retVal;
}
@Search(queryName = "searchIncludesList")
public List<Patient> searchIncludesList(@IncludeParam List<Include> theIncludes) {
if (theIncludes != null) {
ourLastIncludes = new HashSet<Include>(theIncludes);
}
ArrayList<Patient> retVal = new ArrayList<Patient>();
return retVal;
}
@Search(queryName = "searchWithRef")
public Patient searchWithRef() {
Patient patient = new Patient();
patient.setId("Patient/1/_history/1");
patient.getManagingOrganization().setReference("http://localhost:" + ourPort + "/Organization/555/_history/666");
return patient;
}
}
}

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hapi-fhir-structures-r4/src/test/resource/logback-test.xml Normal file
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@ -0,0 +1,30 @@
<configuration>
<appender name="STDOUT" class="ch.qos.logback.core.ConsoleAppender">
<encoder>
<pattern>%d{HH:mm:ss.SSS} [%thread] %-5level %logger{36} [%file:%line] - %msg%n
</pattern>
</encoder>
</appender>
<logger name="org.eclipse" additivity="false" level="info">
<appender-ref ref="STDOUT" />
</logger>
<logger name="org.apache" additivity="false" level="info">
<appender-ref ref="STDOUT" />
</logger>
<logger name="org.thymeleaf" additivity="false" level="warn">
<appender-ref ref="STDOUT" />
</logger>
<!--
<logger name="ca.uhn.fhir.rest.client" additivity="false" level="trace">
<appender-ref ref="STDOUT" />
</logger>
-->
<root level="info">
<appender-ref ref="STDOUT" />
</root>
</configuration>

6
hapi-fhir-validation/src/main/java/org/hl7/fhir/instance/hapi/validation/BaseValidatorBridge.java
View File

@ -5,7 +5,6 @@ import java.util.List;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.utilities.validation.ValidationMessage;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.validation.*;
/**
@ -39,11 +38,6 @@ abstract class BaseValidatorBridge implements IValidatorModule {
protected abstract List<ValidationMessage> validate(IValidationContext<?> theCtx);
@Override
public void validateBundle(IValidationContext<Bundle> theCtx) {
doValidate(theCtx);
}
@Override
public void validateResource(IValidationContext<IBaseResource> theCtx) {
doValidate(theCtx);

11
hapi-fhir-validation/src/main/java/org/hl7/fhir/r4/hapi/validation/BaseValidatorBridge.java
View File

@ -5,11 +5,7 @@ import java.util.List;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.utilities.validation.ValidationMessage;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.validation.IValidationContext;
import ca.uhn.fhir.validation.IValidatorModule;
import ca.uhn.fhir.validation.ResultSeverityEnum;
import ca.uhn.fhir.validation.SingleValidationMessage;
import ca.uhn.fhir.validation.*;
/**
* Base class for a bridge between the RI validation tools and HAPI
@ -42,11 +38,6 @@ abstract class BaseValidatorBridge implements IValidatorModule {
protected abstract List<ValidationMessage> validate(IValidationContext<?> theCtx);
@Override
public void validateBundle(IValidationContext<Bundle> theCtx) {
doValidate(theCtx);
}
@Override
public void validateResource(IValidationContext<IBaseResource> theCtx) {
doValidate(theCtx);

5
hapi-tinder-plugin/src/main/java/ca/uhn/fhir/rest/server/provider/dstu2/Dstu2BundleFactory.java
View File

@ -265,11 +265,6 @@ public class Dstu2BundleFactory implements IVersionSpecificBundleFactory {
}
}
@Override
public ca.uhn.fhir.model.api.Bundle getDstu1Bundle() {
return null;
}
@Override
public IResource getResourceBundle() {
return myBundle;

37
hapi-tinder-plugin/src/main/java/ca/uhn/fhir/tinder/ValueSetGenerator.java
View File

@ -1,23 +1,8 @@
package ca.uhn.fhir.tinder;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileNotFoundException;
import java.io.FileOutputStream;
import java.io.FileReader;
import java.io.IOException;
import java.io.InputStream;
import java.io.InputStreamReader;
import java.io.OutputStreamWriter;
import java.io.*;
import java.nio.charset.Charset;
import java.util.Collection;
import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.TreeMap;
import java.util.*;
import org.apache.commons.io.IOUtils;
import org.apache.commons.lang3.StringUtils;
@ -28,23 +13,17 @@ import org.apache.velocity.app.VelocityEngine;
import org.apache.velocity.tools.generic.EscapeTool;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.model.api.Bundle;
import ca.uhn.fhir.model.api.BundleEntry;
import ca.uhn.fhir.model.dstu.resource.ValueSet;
import ca.uhn.fhir.model.dstu.resource.ValueSet.ComposeInclude;
import ca.uhn.fhir.model.dstu.resource.ValueSet.Define;
import ca.uhn.fhir.model.dstu.resource.ValueSet.DefineConcept;
import ca.uhn.fhir.model.dstu2.resource.Bundle.Entry;
import ca.uhn.fhir.model.dstu2.resource.ValueSet.CodeSystem;
import ca.uhn.fhir.model.dstu2.resource.ValueSet.CodeSystemConcept;
import ca.uhn.fhir.model.dstu2.resource.ValueSet.ComposeIncludeConcept;
import ca.uhn.fhir.model.dstu2.resource.ValueSet.*;
import ca.uhn.fhir.model.primitive.CodeDt;
import ca.uhn.fhir.parser.IParser;
import ca.uhn.fhir.parser.LenientErrorHandler;
import ca.uhn.fhir.tinder.TinderStructuresMojo.ValueSetFileDefinition;
import ca.uhn.fhir.tinder.model.BaseRootType;
import ca.uhn.fhir.tinder.model.ValueSetTm;
import ca.uhn.fhir.tinder.parser.ResourceGeneratorUsingSpreadsheet;
import ca.uhn.fhir.tinder.parser.TargetType;
public class ValueSetGenerator {
@ -126,18 +105,14 @@ public class ValueSetGenerator {
throw new FileNotFoundException(name);
}
String vs = IOUtils.toString(is, Charset.defaultCharset());
if ("dstu".equals(myVersion)) {
Bundle bundle = newXmlParser.parseBundle(vs);
for (BundleEntry next : bundle.getEntries()) {
ValueSet nextVs = (ValueSet) next.getResource();
parseValueSet(nextVs);
}
} else {
if ("dstu2".equals(myVersion)) {
ca.uhn.fhir.model.dstu2.resource.Bundle bundle = newXmlParser.parseResource(ca.uhn.fhir.model.dstu2.resource.Bundle.class, vs);
for (Entry nextEntry : bundle.getEntry()) {
ca.uhn.fhir.model.dstu2.resource.ValueSet nextVs = (ca.uhn.fhir.model.dstu2.resource.ValueSet) nextEntry.getResource();
parseValueSet(nextVs);
}
} else {
throw new IllegalStateException("Fhir version not supported");
}
if (myResourceValueSetFiles != null) {

4
src/changes/changes.xml
View File

@ -18,6 +18,10 @@
being used in Bundle.entry.request.url as a part of the conditional URL
within transactions.
</action>
<action type="fix">
Schematron validator now applies invariants to resources within a Bundle, not
just to the outer Bundle resource itself
</action>
</release
<release version="2.6" date="TBD">
<action type="add">