Work on subscriptions
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@ -0,0 +1,110 @@
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package ca.uhn.fhir.util;
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import ca.uhn.fhir.context.BaseRuntimeChildDefinition;
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import ca.uhn.fhir.context.BaseRuntimeElementDefinition;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.context.RuntimeResourceDefinition;
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import org.hl7.fhir.instance.model.api.IBase;
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import org.hl7.fhir.instance.model.api.IBaseBundle;
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import org.hl7.fhir.instance.model.api.IBaseResource;
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import org.hl7.fhir.instance.model.api.IPrimitiveType;
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import org.thymeleaf.util.Validate;
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/**
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* This class can be used to build a Bundle resource to be used as a FHIR transaction.
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*
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* This is not yet complete, and doesn't support all FHIR features. <b>USE WITH CAUTION</b> as the API
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* may change.
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*
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* @since 5.1.0
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*/
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public class TransactionBuilder {
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private final FhirContext myContext;
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private final IBaseBundle myBundle;
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private final RuntimeResourceDefinition myBundleDef;
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private final BaseRuntimeChildDefinition myEntryChild;
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private final BaseRuntimeElementDefinition<?> myEntryDef;
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private final BaseRuntimeChildDefinition myEntryResourceChild;
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private final BaseRuntimeChildDefinition myEntryFullUrlChild;
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private final BaseRuntimeChildDefinition myEntryRequestChild;
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private final BaseRuntimeElementDefinition<?> myEntryRequestDef;
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private final BaseRuntimeChildDefinition myEntryRequestUrlChild;
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private final BaseRuntimeChildDefinition myEntryRequestMethodChild;
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private final BaseRuntimeElementDefinition<?> myEntryRequestMethodDef;
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/**
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* Constructor
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*/
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public TransactionBuilder(FhirContext theContext) {
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myContext = theContext;
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myBundleDef = myContext.getResourceDefinition("Bundle");
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myBundle = (IBaseBundle) myBundleDef.newInstance();
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BaseRuntimeChildDefinition typeChild = myBundleDef.getChildByName("type");
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IPrimitiveType<?> type = (IPrimitiveType<?>) typeChild.getChildByName("type").newInstance(typeChild.getInstanceConstructorArguments());
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type.setValueAsString("transaction");
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typeChild.getMutator().setValue(myBundle, type);
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myEntryChild = myBundleDef.getChildByName("entry");
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myEntryDef = myEntryChild.getChildByName("entry");
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myEntryResourceChild = myEntryDef.getChildByName("resource");
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myEntryFullUrlChild = myEntryDef.getChildByName("fullUrl");
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myEntryRequestChild = myEntryDef.getChildByName("request");
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myEntryRequestDef = myEntryRequestChild.getChildByName("request");
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myEntryRequestUrlChild = myEntryRequestDef.getChildByName("url");
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myEntryRequestMethodChild = myEntryRequestDef.getChildByName("method");
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myEntryRequestMethodDef = myEntryRequestMethodChild.getChildByName("method");
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}
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/**
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* Adds an entry containing an update (PUT) request
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*
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* @param theResource The resource to update
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*/
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public TransactionBuilder addUpdateEntry(IBaseResource theResource) {
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Validate.notNull(theResource, "theResource must not be null");
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Validate.notEmpty(theResource.getIdElement().getValue(), "theResource must have an ID");
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IBase entry = myEntryDef.newInstance();
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myEntryChild.getMutator().addValue(myBundle, entry);
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// Bundle.entry.fullUrl
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IPrimitiveType<?> fullUrl = (IPrimitiveType<?>) myContext.getElementDefinition("uri").newInstance();
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fullUrl.setValueAsString(theResource.getIdElement().getValue());
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myEntryFullUrlChild.getMutator().setValue(entry, fullUrl);
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// Bundle.entry.resource
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myEntryResourceChild.getMutator().setValue(entry, theResource);
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// Bundle.entry.request
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IBase request = myEntryRequestDef.newInstance();
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myEntryRequestChild.getMutator().setValue(entry, request);
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// Bundle.entry.request.url
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IPrimitiveType<?> url = (IPrimitiveType<?>) myContext.getElementDefinition("uri").newInstance();
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url.setValueAsString(theResource.getIdElement().toUnqualifiedVersionless().getValue());
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myEntryRequestUrlChild.getMutator().setValue(request, url);
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// Bundle.entry.request.url
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IPrimitiveType<?> method = (IPrimitiveType<?>) myEntryRequestMethodDef.newInstance(myEntryRequestMethodChild.getInstanceConstructorArguments());
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method.setValueAsString("PUT");
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myEntryRequestMethodChild.getMutator().setValue(request, method);
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return this;
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}
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public IBaseBundle getBundle() {
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return myBundle;
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}
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}
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@ -8,6 +8,7 @@ import ca.uhn.fhir.jpa.subscription.submit.interceptor.SubscriptionMatcherInterc
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import ca.uhn.fhir.rest.annotation.Create;
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import ca.uhn.fhir.rest.annotation.ResourceParam;
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import ca.uhn.fhir.rest.annotation.Transaction;
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import ca.uhn.fhir.rest.annotation.TransactionParam;
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import ca.uhn.fhir.rest.annotation.Update;
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import ca.uhn.fhir.rest.api.Constants;
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import ca.uhn.fhir.rest.api.MethodOutcome;
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@ -211,7 +212,8 @@ public abstract class BaseSubscriptionsR4Test extends BaseResourceProviderR4Test
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public static class PlainProvider {
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@Transaction
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public Bundle transaction(@RequestParam Bundle theInput) {
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public Bundle transaction(@TransactionParam Bundle theInput) {
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ourLog.info("Received transaction update");
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ourTransactions.add(theInput);
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return theInput;
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}
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@ -231,8 +233,8 @@ public abstract class BaseSubscriptionsR4Test extends BaseResourceProviderR4Test
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public static void startListenerServer() throws Exception {
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RestfulServer ourListenerRestServer = new RestfulServer(FhirContext.forR4());
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ObservationResourceProvider observationResourceProvider = new ObservationResourceProvider();
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ourListenerRestServer.setResourceProviders(observationResourceProvider);
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ourListenerRestServer.registerProvider(new ObservationResourceProvider());
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ourListenerRestServer.registerProvider(new PlainProvider());
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ourListenerServer = new Server(0);
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@ -1014,10 +1014,10 @@ public class RestHookTestR4Test extends BaseSubscriptionsR4Test {
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@Test
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public void testDeliverSearchSet() throws Exception {
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public void testDeliverSearchResult() throws Exception {
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{
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Subscription subscription = newSubscription("Observation?", "application/json");
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subscription.addExtension(JpaConstants.EXT_SUBSCRIPTION_DELIVER_BUNDLE_SEARCH_RESULT, new StringType("Observation?_id=${resource_id}&_include=*"));
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subscription.addExtension(JpaConstants.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_RESULT, new StringType("Observation?_id=${matched_resource_id}&_include=*"));
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MethodOutcome methodOutcome = ourClient.create().resource(subscription).execute();
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mySubscriptionIds.add(methodOutcome.getId());
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waitForActivatedSubscriptionCount(1);
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@ -1030,11 +1030,17 @@ public class RestHookTestR4Test extends BaseSubscriptionsR4Test {
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Observation observation = new Observation();
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observation.addExtension().setUrl("Observation#accessType").setValue(new Coding().setCode("Catheter"));
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observation.getSubject().setReferenceElement(patientId);
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observation.getSubject().setReferenceElement(patientId.toUnqualifiedVersionless());
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MethodOutcome methodOutcome = ourClient.create().resource(observation).execute();
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assertEquals(true, methodOutcome.getCreated());
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waitForQueueToDrain();
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waitForSize(1, ourTransactions);
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ourLog.info("Received transaction: {}", myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(ourTransactions.get(0)));
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Bundle xact = ourTransactions.get(0);
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assertEquals(2, xact.getEntry().size());
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}
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}
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@ -215,9 +215,9 @@ public class JpaConstants {
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*/
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public static final String EXT_EXTERNALIZED_BINARY_ID = "http://hapifhir.io/fhir/StructureDefinition/externalized-binary-id";
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/**
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* For subscription, deliver a bundle containinf a search result instead of just a single resource
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* For subscription, deliver a bundle containing a search result instead of just a single resource
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*/
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public static final String EXT_SUBSCRIPTION_DELIVER_BUNDLE_SEARCH_RESULT = "http://hapifhir.io/fhir/StructureDefinition/subscription-deliver-bundle-search-result";
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public static final String EXT_SUBSCRIPTION_PAYLOAD_SEARCH_RESULT = "http://hapifhir.io/fhir/StructureDefinition/subscription-payload-search-result";
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/**
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* Placed in system-generated extensions
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*/
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@ -74,7 +74,7 @@ public class SubscriptionDeliveringMessageSubscriber extends BaseSubscriptionDel
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public void handleMessage(ResourceDeliveryMessage theMessage) throws MessagingException, URISyntaxException {
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CanonicalSubscription subscription = theMessage.getSubscription();
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// Interceptor call: SUBSCRIPTION_BEFORE_REST_HOOK_DELIVERY
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// Interceptor call: SUBSCRIPTION_BEFORE_MESSAGE_DELIVERY
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HookParams params = new HookParams()
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.add(CanonicalSubscription.class, subscription)
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.add(ResourceDeliveryMessage.class, theMessage);
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@ -104,7 +104,7 @@ public class SubscriptionDeliveringMessageSubscriber extends BaseSubscriptionDel
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deliverPayload(theMessage, subscription, channelProducer);
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// Interceptor call: SUBSCRIPTION_AFTER_REST_HOOK_DELIVERY
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// Interceptor call: SUBSCRIPTION_AFTER_MESSAGE_DELIVERY
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params = new HookParams()
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.add(CanonicalSubscription.class, subscription)
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.add(ResourceDeliveryMessage.class, theMessage);
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@ -25,11 +25,14 @@ import ca.uhn.fhir.interceptor.api.HookParams;
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import ca.uhn.fhir.interceptor.api.Pointcut;
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import ca.uhn.fhir.jpa.api.dao.DaoRegistry;
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import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
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import ca.uhn.fhir.jpa.searchparam.MatchUrlService;
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import ca.uhn.fhir.jpa.searchparam.SearchParameterMap;
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import ca.uhn.fhir.jpa.subscription.match.deliver.BaseSubscriptionDeliverySubscriber;
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import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscription;
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import ca.uhn.fhir.jpa.subscription.model.ResourceDeliveryMessage;
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import ca.uhn.fhir.rest.api.EncodingEnum;
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import ca.uhn.fhir.rest.api.RequestTypeEnum;
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import ca.uhn.fhir.rest.api.server.IBundleProvider;
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import ca.uhn.fhir.rest.client.api.Header;
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import ca.uhn.fhir.rest.client.api.IGenericClient;
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import ca.uhn.fhir.rest.client.api.IHttpClient;
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@ -40,7 +43,10 @@ import ca.uhn.fhir.rest.client.interceptor.SimpleRequestHeaderInterceptor;
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import ca.uhn.fhir.rest.gclient.IClientExecutable;
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import ca.uhn.fhir.rest.server.exceptions.ResourceGoneException;
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import ca.uhn.fhir.rest.server.exceptions.ResourceNotFoundException;
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import ca.uhn.fhir.util.TransactionBuilder;
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import org.apache.commons.lang3.StringUtils;
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import org.apache.commons.text.StringSubstitutor;
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import org.apache.http.NameValuePair;
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import org.hl7.fhir.instance.model.api.IBaseResource;
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import org.hl7.fhir.instance.model.api.IIdType;
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import org.slf4j.Logger;
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@ -65,6 +71,9 @@ public class SubscriptionDeliveringRestHookSubscriber extends BaseSubscriptionDe
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@Autowired
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private DaoRegistry myDaoRegistry;
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@Autowired
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private MatchUrlService myMatchUrlService;
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/**
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* Constructor
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*/
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@ -81,6 +90,30 @@ public class SubscriptionDeliveringRestHookSubscriber extends BaseSubscriptionDe
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protected void doDelivery(ResourceDeliveryMessage theMsg, CanonicalSubscription theSubscription, EncodingEnum thePayloadType, IGenericClient theClient, IBaseResource thePayloadResource) {
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IClientExecutable<?, ?> operation;
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if (isNotBlank(theSubscription.getPayloadSearchResult())) {
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String resType = theSubscription.getPayloadSearchResult().substring(0, theSubscription.getPayloadSearchResult().indexOf('?'));
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IFhirResourceDao<?> dao = myDaoRegistry.getResourceDao(resType);
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RuntimeResourceDefinition resourceDefinition = myFhirContext.getResourceDefinition(resType);
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String payloadUrl = theSubscription.getPayloadSearchResult();
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Map<String, String> valueMap = new HashMap<>(1);
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valueMap.put("matched_resource_id", thePayloadResource.getIdElement().toUnqualifiedVersionless().getValue());
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payloadUrl = new StringSubstitutor(valueMap).replace(payloadUrl);
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SearchParameterMap payloadSearchMap = myMatchUrlService.translateMatchUrl(payloadUrl, resourceDefinition);
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payloadSearchMap.setLoadSynchronous(true);
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IBundleProvider searchResults = dao.search(payloadSearchMap);
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TransactionBuilder builder = new TransactionBuilder(myFhirContext);
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for (IBaseResource next : searchResults.getResources(0, searchResults.size())) {
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builder.addUpdateEntry(next);
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}
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operation = theClient.transaction().withBundle(builder.getBundle());
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} else {
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switch (theMsg.getOperationType()) {
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case CREATE:
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case UPDATE:
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@ -108,6 +141,8 @@ public class SubscriptionDeliveringRestHookSubscriber extends BaseSubscriptionDe
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return;
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}
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}
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if (thePayloadType != null) {
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operation.encoded(thePayloadType);
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}
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@ -113,6 +113,7 @@ public class SubscriptionCanonicalizer {
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retVal.setChannelExtensions(extractExtension(subscription));
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retVal.setIdElement(subscription.getIdElement());
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retVal.setPayloadString(subscription.getChannel().getPayload());
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retVal.setPayloadSearchResult(getExtensionString(subscription, JpaConstants.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_RESULT));
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if (retVal.getChannelType() == CanonicalSubscriptionChannelType.EMAIL) {
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String from;
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@ -208,6 +209,7 @@ public class SubscriptionCanonicalizer {
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retVal.setChannelExtensions(extractExtension(subscription));
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retVal.setIdElement(subscription.getIdElement());
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retVal.setPayloadString(subscription.getChannel().getPayload());
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retVal.setPayloadSearchResult(getExtensionString(subscription, JpaConstants.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_RESULT));
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if (retVal.getChannelType() == CanonicalSubscriptionChannelType.EMAIL) {
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String from;
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@ -261,7 +263,7 @@ public class SubscriptionCanonicalizer {
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retVal.setChannelExtensions(extractExtension(subscription));
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retVal.setIdElement(subscription.getIdElement());
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retVal.setPayloadString(subscription.getContentType());
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retVal.setDeliverBundleSearchResult(getExtensionString(subscription, JpaConstants.EXT_SUBSCRIPTION_DELIVER_BUNDLE_SEARCH_RESULT));
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retVal.setPayloadSearchResult(getExtensionString(subscription, JpaConstants.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_RESULT));
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if (retVal.getChannelType() == CanonicalSubscriptionChannelType.EMAIL) {
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String from;
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@ -34,7 +34,11 @@ import org.hl7.fhir.r4.model.Subscription;
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import javax.annotation.Nonnull;
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import javax.annotation.Nullable;
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import java.io.Serializable;
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import java.util.*;
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import java.util.ArrayList;
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import java.util.Collections;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import static org.apache.commons.lang3.StringUtils.isNotBlank;
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@ -64,8 +68,8 @@ public class CanonicalSubscription implements Serializable, Cloneable, IModelJso
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private RestHookDetails myRestHookDetails;
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@JsonProperty("extensions")
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private Map<String, List<String>> myChannelExtensions;
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@JsonProperty("deliverBundleSearchResult")
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private String myDeliverBundleSearchResult;
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@JsonProperty("payloadSearchResult")
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private String myPayloadSearchResult;
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/**
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* Constructor
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@ -74,6 +78,14 @@ public class CanonicalSubscription implements Serializable, Cloneable, IModelJso
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super();
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}
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public String getPayloadSearchResult() {
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return myPayloadSearchResult;
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}
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public void setPayloadSearchResult(String thePayloadSearchResult) {
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myPayloadSearchResult = thePayloadSearchResult;
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}
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/**
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* For now we're using the R4 TriggerDefinition, but this
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* may change in the future when things stabilize
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@ -82,7 +94,6 @@ public class CanonicalSubscription implements Serializable, Cloneable, IModelJso
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myTrigger = theTrigger;
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}
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public CanonicalSubscriptionChannelType getChannelType() {
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return myChannelType;
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}
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@ -278,8 +289,21 @@ public class CanonicalSubscription implements Serializable, Cloneable, IModelJso
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}
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}
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public void setDeliverBundleSearchResult(String theDeliverBundleSearchResult) {
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myDeliverBundleSearchResult = theDeliverBundleSearchResult;
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@Override
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public String toString() {
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return new ToStringBuilder(this)
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.append("myIdElement", myIdElement)
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.append("myStatus", myStatus)
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.append("myCriteriaString", myCriteriaString)
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.append("myEndpointUrl", myEndpointUrl)
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.append("myPayloadString", myPayloadString)
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// .append("myHeaders", myHeaders)
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.append("myChannelType", myChannelType)
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// .append("myTrigger", myTrigger)
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// .append("myEmailDetails", myEmailDetails)
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// .append("myRestHookDetails", myRestHookDetails)
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// .append("myChannelExtensions", myChannelExtensions)
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.toString();
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}
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public static class EmailDetails implements IModelJson {
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@ -400,21 +424,4 @@ public class CanonicalSubscription implements Serializable, Cloneable, IModelJso
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}
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}
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@Override
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public String toString() {
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return new ToStringBuilder(this)
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.append("myIdElement", myIdElement)
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.append("myStatus", myStatus)
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.append("myCriteriaString", myCriteriaString)
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.append("myEndpointUrl", myEndpointUrl)
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.append("myPayloadString", myPayloadString)
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// .append("myHeaders", myHeaders)
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.append("myChannelType", myChannelType)
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// .append("myTrigger", myTrigger)
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// .append("myEmailDetails", myEmailDetails)
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// .append("myRestHookDetails", myRestHookDetails)
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// .append("myChannelExtensions", myChannelExtensions)
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.toString();
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}
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}
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@ -25,6 +25,7 @@ import ca.uhn.fhir.interceptor.api.Hook;
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import ca.uhn.fhir.interceptor.api.Interceptor;
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import ca.uhn.fhir.interceptor.api.Pointcut;
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import ca.uhn.fhir.jpa.api.dao.DaoRegistry;
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import ca.uhn.fhir.jpa.model.util.JpaConstants;
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import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionMatchingStrategy;
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import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionStrategyEvaluator;
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import ca.uhn.fhir.jpa.subscription.match.registry.SubscriptionCanonicalizer;
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||||
|
@ -96,32 +97,19 @@ public class SubscriptionValidatingInterceptor {
|
|||
|
||||
if (!finished) {
|
||||
|
||||
String query = subscription.getCriteriaString();
|
||||
if (isBlank(query)) {
|
||||
throw new UnprocessableEntityException("Subscription.criteria must be populated");
|
||||
}
|
||||
validateQuery(subscription.getCriteriaString(), "Subscription.criteria");
|
||||
|
||||
int sep = query.indexOf('?');
|
||||
if (sep <= 1) {
|
||||
throw new UnprocessableEntityException("Subscription.criteria must be in the form \"{Resource Type}?[params]\"");
|
||||
}
|
||||
|
||||
String resType = query.substring(0, sep);
|
||||
if (resType.contains("/")) {
|
||||
throw new UnprocessableEntityException("Subscription.criteria must be in the form \"{Resource Type}?[params]\"");
|
||||
if (subscription.getPayloadSearchResult() != null) {
|
||||
validateQuery(subscription.getPayloadSearchResult(), "Subscription.extension(url='" + JpaConstants.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_RESULT + "')");
|
||||
}
|
||||
|
||||
validateChannelType(subscription);
|
||||
|
||||
if (!myDaoRegistry.isResourceTypeSupported(resType)) {
|
||||
throw new UnprocessableEntityException("Subscription.criteria contains invalid/unsupported resource type: " + resType);
|
||||
}
|
||||
|
||||
try {
|
||||
SubscriptionMatchingStrategy strategy = mySubscriptionStrategyEvaluator.determineStrategy(query);
|
||||
SubscriptionMatchingStrategy strategy = mySubscriptionStrategyEvaluator.determineStrategy(subscription.getCriteriaString());
|
||||
mySubscriptionCanonicalizer.setMatchingStrategyTag(theSubscription, strategy);
|
||||
} catch (InvalidRequestException | DataFormatException e) {
|
||||
throw new UnprocessableEntityException("Invalid subscription criteria submitted: " + query + " " + e.getMessage());
|
||||
throw new UnprocessableEntityException("Invalid subscription criteria submitted: " + subscription.getCriteriaString() + " " + e.getMessage());
|
||||
}
|
||||
|
||||
if (subscription.getChannelType() == null) {
|
||||
|
@ -129,6 +117,28 @@ public class SubscriptionValidatingInterceptor {
|
|||
} else if (subscription.getChannelType() == CanonicalSubscriptionChannelType.MESSAGE) {
|
||||
validateMessageSubscriptionEndpoint(subscription.getEndpointUrl());
|
||||
}
|
||||
|
||||
|
||||
}
|
||||
}
|
||||
|
||||
public void validateQuery(String theQuery, String theFieldName) {
|
||||
if (isBlank(theQuery)) {
|
||||
throw new UnprocessableEntityException(theFieldName + " must be populated");
|
||||
}
|
||||
|
||||
int sep = theQuery.indexOf('?');
|
||||
if (sep <= 1) {
|
||||
throw new UnprocessableEntityException(theFieldName + " must be in the form \"{Resource Type}?[params]\"");
|
||||
}
|
||||
|
||||
String resType = theQuery.substring(0, sep);
|
||||
if (resType.contains("/")) {
|
||||
throw new UnprocessableEntityException(theFieldName + " must be in the form \"{Resource Type}?[params]\"");
|
||||
}
|
||||
|
||||
if (!myDaoRegistry.isResourceTypeSupported(resType)) {
|
||||
throw new UnprocessableEntityException(theFieldName + " contains invalid/unsupported resource type: " + resType);
|
||||
}
|
||||
}
|
||||
|
||||
|
|
|
@ -0,0 +1,40 @@
|
|||
package ca.uhn.fhir.util;
|
||||
|
||||
import ca.uhn.fhir.context.FhirContext;
|
||||
import org.hl7.fhir.r4.model.Bundle;
|
||||
import org.hl7.fhir.r4.model.Patient;
|
||||
import org.hl7.fhir.r4.model.codesystems.HttpVerb;
|
||||
import org.junit.Test;
|
||||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertSame;
|
||||
|
||||
public class TransactionBuilderTest {
|
||||
private static final Logger ourLog = LoggerFactory.getLogger(TransactionBuilderTest.class);
|
||||
private FhirContext myFhirContext = FhirContext.forR4();
|
||||
|
||||
@Test
|
||||
public void testAddEntryUpdate() {
|
||||
TransactionBuilder builder = new TransactionBuilder(myFhirContext);
|
||||
|
||||
Patient patient = new Patient();
|
||||
patient.setId("http://foo/Patient/123");
|
||||
patient.setActive(true);
|
||||
builder.addUpdateEntry(patient);
|
||||
|
||||
Bundle bundle = (Bundle) builder.getBundle();
|
||||
ourLog.info("Bundle:\n{}", myFhirContext.newJsonParser().setPrettyPrint(true).encodeResourceToString(bundle));
|
||||
|
||||
assertEquals(Bundle.BundleType.TRANSACTION, bundle.getType());
|
||||
assertEquals(1, bundle.getEntry().size());
|
||||
assertSame(patient, bundle.getEntry().get(0).getResource());
|
||||
assertEquals("http://foo/Patient/123", bundle.getEntry().get(0).getFullUrl());
|
||||
assertEquals("Patient/123", bundle.getEntry().get(0).getRequest().getUrl());
|
||||
assertEquals(Bundle.HTTPVerb.PUT, bundle.getEntry().get(0).getRequest().getMethod());
|
||||
|
||||
|
||||
}
|
||||
|
||||
}
|
Loading…
Reference in New Issue