1f37cdd8cf
Address review comments
2020-04-21 20:53:10 -04:00
49d15dbbe8
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/schema.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:32:27 -04:00
45fdd9981e
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:30:50 -04:00
4184268bea
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:30:10 -04:00
50ef7d7afd
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:27:24 -04:00
6e444986bc
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:26:02 -04:00
7d0d7d9ab7
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:20:34 -04:00
d10538cdbe
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:20:20 -04:00
fb4e620ba8
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:19:50 -04:00
532c830a43
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:19:35 -04:00
4fe7f6e322
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:19:02 -04:00
53695c50a0
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:18:47 -04:00
c67cbca8c2
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:18:33 -04:00
c7de85339c
Work on review comments
2020-04-21 20:18:06 -04:00
02e5dcb90d
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:17:44 -04:00
138369ede2
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/partitioning.md
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Co-Authored-By: Ken Stevens <khstevens@gmail.com>
2020-04-21 20:17:17 -04:00
11fade2c2e
Bump boot version
2020-04-21 15:55:35 -04:00
4b93a0d724
Credit for #1806
2020-04-21 15:49:43 -04:00
1f848dde82
Credit for #1791
2020-04-21 15:30:42 -04:00
c716216b34
Adjust return type for fluent delete() operation ( #1805 )
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* Add cascading delete to client
* Add changelog
* Client delete should return MethodOutcome
* Rerturn more appropriate type for delete operations
* Refactor cascade detection to be reusable
2020-04-21 15:23:11 -04:00
f218ade480
Credit for #1810
2020-04-21 15:15:04 -04:00
4abebf2247
Docs cleanup
2020-04-21 09:28:52 -04:00
1133c5a6fc
retroactively add javadoc for a search database change
2020-04-20 17:24:30 -04:00
e6c806283e
Merge branch 'ja_20200206_multitenancy' of github.com:jamesagnew/hapi-fhir into ja_20200206_multitenancy
2020-04-20 16:58:59 -04:00
544d9fbc6c
Add migration tasks
2020-04-20 16:58:48 -04:00
bbab016ca6
Rename config
2020-04-20 12:38:04 -04:00
faddeeb779
Add changelog
2020-04-20 11:15:35 -04:00
95b77af570
Merge branch 'master' into ja_20200206_multitenancy
2020-04-20 11:07:10 -04:00
7248b4e18e
Finish docs
2020-04-20 11:02:27 -04:00
c412339a05
Merge branch 'ja_20200206_multitenancy' of github.com:jamesagnew/hapi-fhir into ja_20200206_multitenancy
2020-04-19 14:41:26 -04:00
d3479cd093
Work on docs
2020-04-19 14:41:18 -04:00
cd3e1c5e72
Tenancy docs
2020-04-19 10:15:51 -04:00
6c760c9bff
DOcs work
2020-04-18 19:14:02 -04:00
c0965b1be8
Work on docs
2020-04-18 18:54:46 -04:00
2ddeea37c2
Work on multitenancy
2020-04-18 17:27:06 -04:00
42c8cd0e38
Add cascading delete to client ( #1804 )
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* Add cascading delete to client
* Add changelog
2020-04-18 11:16:16 -04:00
bcac2b061c
Credit for #1799
2020-04-18 11:14:15 -04:00
48057b9d8e
Merge branch 'master' into ja_20200206_multitenancy
2020-04-17 17:59:48 -04:00
497757501b
Improve search method binding priority ( #1802 )
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* Work on search method binding priority
* Work on method priority
* Work on binding priority
* Test fixes
* Add changelog
* Test fixes
* compile fix
* One more comple fix
* Test cleanup
* Test fix
2020-04-17 09:28:33 -04:00
25cdbb15c2
Work on multitenancy
2020-04-16 15:33:48 -04:00
d822867a4a
Merge branch 'master' into ja_20200206_multitenancy
2020-04-15 22:12:20 -04:00
f95f619bdc
Correct two JPA processing bugs ( #1801 )
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* Work on search params on contained
* Add workaround for stored decimals with leading decimal point
* Add changelog
* Cleanup
* Test fix
* Test fix
* One more test fix
2020-04-15 14:22:47 -04:00
982b54df57
Work on multitenancy
2020-04-13 11:50:49 -04:00
c26a5553e9
Multitenancy work
2020-04-12 20:47:32 -04:00
e55ccf88fc
Work on multitenancy
2020-04-10 20:01:59 -04:00
219332e9e3
Work on multitenancy
2020-04-10 11:11:29 -04:00
1a3a40b3c9
Merge pull request #1796 from jamesagnew/ja_20200409_report_json_error_attr_name
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Improve error message reporting for invalid json - Fix #1793
2020-04-09 15:11:57 -04:00
e0fcbe1df2
Merge branch 'master' into ja_20200206_multitenancy
2020-04-09 11:52:27 -04:00
fdf6633145
Add validation for currencies to validator ( #1797 )
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* Add validation for currencies to validator
* Add changelog
2020-04-09 11:39:30 -04:00
2a43aa3b6c
Improve error message reporting for invalid json - Fix #1793
2020-04-09 09:53:13 -04:00
8cdc3a72ce
Fix #1794 - Client ID and Server ID mode clash ( #1795 )
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* Fix #1794 - Client ID and Server ID mode clash
* Try to track down intermittent test failure
2020-04-09 09:31:13 -04:00
0e44786320
Add changelog
2020-04-08 18:07:36 -04:00
b78205c218
Ongoing cleanup
2020-04-06 17:00:45 -04:00
6baf1995c9
Work on subscription cleanup
2020-04-02 20:30:19 -04:00
08c1c28f67
Credit for #1786
2020-03-31 20:08:25 -04:00
9d09466c21
Add debug logging to CLI
2020-03-31 10:49:16 -04:00
fe48313100
Add response size capturing interceptor ( #1776 )
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* Work on capturing repsonse sizes
* Interceptor complete
* Add changelog
* Test fix
2020-03-30 11:24:10 -04:00
62d867902f
Work on multitenancy
2020-03-29 18:16:04 -04:00
691f2c4e9a
Work on muiltitenancy
2020-03-29 13:35:20 -04:00
9df4c58122
Work on multitenancy
2020-03-27 09:22:00 -04:00
ec6fe70acb
Merge branch 'master' into ja_20200206_multitenancy
2020-03-27 05:50:08 -04:00
b794618e9d
Avoid a crash encoding contained bundle ( #1778 )
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* Avoid a crash encoding contained bundle
* Add changelog
* Apply same fix to XML
* Fix typo
2020-03-25 21:20:10 -04:00
4b5165b5e2
Docs fix
2020-03-24 20:10:14 -04:00
eaaddaf7ca
Fix #1763 - Include bundle type in summary=count responses ( #1773 )
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* Fix #1763 - Include bundle type in summary=count responses
* Test fix
2020-03-24 16:24:41 -04:00
c6d23a8bc6
Add chain on _type parameter ( #1772 )
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* Add chain on _type parameter
* Add changelog
* Test fix
* Address review comments
* Fix azure yaml
* Correct HTTPs in pom
* One more pom tweak
* Test fix
* Try azure again
2020-03-24 09:44:57 -04:00
13f0e5384b
Address review comments
2020-03-24 06:02:55 -04:00
fa29f3e8ab
Credit for #1770
2020-03-23 19:12:05 -04:00
7706600a8c
Add changelog
2020-03-23 18:05:48 -04:00
14316147c5
Resolve some docs issues
2020-03-23 10:34:12 -04:00
c2ae5a8326
Add FHIRPath evaluation interceptor ( #1769 )
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* Add FHIRPath evaluation interceptor
* Add changelog
2020-03-22 12:57:24 -04:00
b8b8248133
Merge branch 'master' of https://github.com/jaferkhan/hapi-fhir into cleanup-docs-v2
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# Conflicts:
# hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/validation/profile_validator.md
2020-03-22 02:25:11 +05:00
ad46c3173a
Add missed attribution to changelog
2020-03-18 10:26:33 -07:00
3eb09b15f0
Merge branch 'master' into bugfix/1752-support-chained-parameters-inside-reverse-chained-parameter
2020-03-17 10:32:43 -07:00
22413911bf
Validation api changes ( #1719 )
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* Validation enhancements
* Work on validation api reworking
* Keep working on validation API
* Keep working on new term API
* Work on validation api
* Ongoing work on validation
* Work on integrating validation
* Work on validation API
* Add to validation API
* Work on validation
* Work on API
* Work on validation
* Work on validation API
* Work on validation API
* Work on validation api
* Work on validation API
* Work on validation api
* Validation API changes
* Work on API
* More work on validationo API
* Work on validation API
* FIxes
* WOrk on validation api
* Work on validation API
* Tests passing!
* More cleanup
* More validation API changes
* Fix intermittent test failure
* Package reorg
* Validation API work
* Work on doocumentation
* Work on API
* More work on new validation API
* Fix errorprone-reported error
* Test fixes
* Documentation updates
* Documentation tweaks
* Work on API
* Bean name adjustments
* Build fixes
* Some test fixes
2020-03-17 13:28:59 -04:00
77733b59fa
Add changelog
2020-03-17 09:33:58 -07:00
288abe4504
Improve efficiency in search deleting ( #1759 )
...
* Improve efficiency in search deleting
* Changelog
* Address review comments
2020-03-17 12:33:38 -04:00
5867d62d62
Avoid duplicate predicate in _id queries ( #1761 )
...
* Avoid duplicate predicate in _id queries
* Add changelog
* Change to trigger CI
* Address review comments
2020-03-17 11:12:58 -04:00
1dc5d89013
Optmize forced ID resolution ( #1754 )
...
* Add forced ID caching
* Work on id optimization
* Test fixes
* More optimization work
* Add some docs
* Work on docs
* Test fixes
* Test fixes
* Test fixes
* Address review comments
* Compile fix
2020-03-12 17:12:50 -04:00
46c67d20cc
Add VEIG(Vietnam Ehealth Innovation Group) to points.json
2020-03-06 17:43:56 +07:00
828ddd5185
Update docs
2020-03-04 12:14:55 -08:00
58ee76549c
Merge branch 'master' into ja_20200206_multitenancy
2020-03-04 08:19:22 -05:00
5b5ef08500
Merge remote-tracking branch 'remotes/origin/master' into ks-20200302-near-chain
2020-03-03 09:44:52 -05:00
4a160a2df3
Merge branch 'master' into ja_20200206_multitenancy
2020-03-03 09:25:19 -05:00
58b5bd9664
Limit type on _has query ( #1743 )
...
* Limit type on _has query
* Add changelog
2020-03-03 08:28:38 -05:00
3c2c1dab2e
Error on missing profile validation ( #1742 )
...
* Error on missing profile validation
* Add changelog
* Test fixes
2020-03-03 08:28:26 -05:00
bce1716c6c
documentation
2020-03-02 22:13:21 -05:00
8c78e465b1
Defer large term delta adds ( #1736 )
...
* Defer large term delta adds
* Add changelog
2020-02-28 14:41:15 -05:00
5bc554949b
Remove deleted resources from cached search results ( #1732 )
...
* Remove deleted resources from cached search results
* Add changelog
* Add tests
2020-02-28 10:57:26 -05:00
cb9906580e
Index canonical references ( #1728 )
...
* Index canonical references
* Add changelog
* Fix compile error
* Add whitespace
2020-02-25 21:45:46 -05:00
df9e86ec66
Merge branch 'master' into date-match-bug
2020-02-25 17:26:53 -05:00
b2b0ff22b4
Collapse date joins ( #1726 )
...
* Collapse date joins
* Add changelog
* Address review comments
* Add whitespace
* fix test
Co-authored-by: Ken Stevens <ken.stevens@sympatico.ca>
2020-02-25 17:17:13 -05:00
97c98254d0
Extract Common functionality out of CalculateHashesTask, build CalculateOrdinalDatesTask based on it
2020-02-25 16:09:08 -05:00
512af5b87d
Add changelog entry
2020-02-25 14:09:51 -05:00
a05c4ce9eb
Don't thrash delta links ( #1721 )
...
* Don't thrash delta links
* Add changelog
* Remove commented out code
2020-02-19 17:46:54 -05:00
ab8dfa5a03
Avoid multi-term for ElasticSearch ( #1717 )
...
* Avoid multi-term for ElasticSearch
* Add changelog
* Remove redundant code
2020-02-18 16:40:44 -05:00
fba28950ec
Merge pull request #1693 from jamesagnew/im_20200131_remove_circular_dependency_forcedid
...
Changes to schema to loosen dependencies involving Forced ID table
2020-02-18 14:16:09 -05:00
64f07e4dc0
Includes performance enhancement ( #1702 )
...
* Includes performance enhancement
* Add changelog
* Test fix
* Fix typo
* A few coverage cleanups
* Test fix
* Fix changelog
2020-02-18 14:11:48 -05:00
2f4f62b32e
Add change log for Resource and Resource History table changes.
2020-02-18 14:09:59 -05:00
60f16dd91d
Update to 4.3.x core JAR ( #1715 )
...
* Added optionality for adding resource fetcher
* Added coverage that proves invocations
* Bumped version of fhir.core to latest version. Added wrapping of AssumeValidRestReferences
* Added optionality for adding resource fetcher
* Added coverage that proves invocations
* Bumped version of fhir.core to latest version. Added wrapping of AssumeValidRestReferences
* Start working on converter
* Account for compile errors
* Test fix
* Work no validator
* Work on getting core working
* Add some test coverage
* Many test fixes
Co-authored-by: Jens Kristian Villadsen <46567685+jvitrifork@users.noreply.github.com>
2020-02-17 14:28:29 -05:00
ddc7b601ee
Version bump to 4.3.0-SNAPSHOT
2020-02-16 19:23:22 -05:00
4fd80cfca7
Bump to 4.2.0
2020-02-16 19:00:15 -05:00
f7ec41ffc5
Work on multitenancy
2020-02-09 08:40:15 -05:00
b2d2346228
Work on multitenancy
2020-02-07 15:18:06 -05:00
97289b3a1f
Credit for #1692
2020-02-04 17:38:42 -05:00
afd6a2b3a7
Remove entry from atlas
2020-02-01 17:31:57 -05:00
2545fc6e3d
Merge remote-tracking branch 'remotes/origin/master' into ks-20200120-near-search
...
# Conflicts:
# hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/4_2_0/changes.yaml
2020-01-29 17:06:02 -05:00
beab5b3a9c
Credit for #1689
2020-01-29 05:56:36 -05:00
95254406bc
updated custom narrative generation documentation
...
I found that the documented pattern of
[name].class=[fully qualified classname]
No longer works. The pattern of
[name].resourceType=[ResourceType]
worked for me, I updated the datatype example as well in kind, but I've not used it that way.
Maybe some extended examples for the other property type extensions would be good - e.g. .profile, .style, .contextPath, .narrative, .title
2020-01-29 05:53:45 -05:00
471073103f
Further reduce memory usage in the terminology delta operations
2020-01-28 14:36:15 -05:00
cef58b528e
added _filter to list of search gaps
2020-01-25 18:46:58 -05:00
eff4b294df
Merge remote-tracking branch 'remotes/origin/master' into ks-20200120-near-search
...
# Conflicts:
# hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/4_2_0/changes.yaml
2020-01-25 18:40:55 -05:00
ba0048aade
Resolve memory leak ( #1685 )
...
* Work on memory leak
* Work on term delta uploading
* Resolve memoery leak in terminology service
* Fix cache key
2020-01-25 17:48:26 -05:00
a63c62b2e1
ensure in-memory matching location search for Dstu3 falls back to a db search
2020-01-25 14:35:20 -05:00
78ab01f00b
Change log and check in-memory search for location
2020-01-24 21:56:14 -05:00
dd01688a90
Credit for #1679
2020-01-24 08:32:19 -05:00
39ff698dd2
Parser performance tweaks ( #1660 )
...
* Parser improvements
* Parser tweaks
* Fix test
* Add changelog
* Bump spring mvc version
* Bump spring version
* Test fix?
2020-01-22 14:44:12 -05:00
0718f6b52a
Allow schemalocation in XML validation ( #1677 )
...
* Allow schemaLocation declaration in XML when validating
* Add fix for #1676
2020-01-21 07:14:16 +09:00
c0e929dacb
Copy identifiers to placeholder resources ( #1675 )
...
* Copy identifiers to placeholder resources
* Add tests
* Maven cleanup
* Still messing around with azure
* Adding to logging
* More azure work
* One more attempt
* More messing around with azure
* Test fix
* Another caching attempt
* More work on azure pipeline
* Fix pipeline file
* Keep working on pipeline
* More work on azure
* More azure
* More azure work
* More azure
2020-01-21 06:09:06 +09:00
aad5a30a3d
Support count=0 ( #1670 )
...
* Support count=0
* Fix LGTM issue
2020-01-15 14:52:32 +08:00
201ec34db4
Fix expunge issue when no tags present ( #1671 )
...
* Fix expunge issue when no tags present
* Add changelog
* Try to clean up POMs that are failing CI
* Rework dependencies
* Roll back change that did not work
2020-01-15 14:47:22 +08:00
1390ea3c06
Update FHIR R5 structures to 4.2.0 version ( #1665 )
...
* Work on upgrading core
* Work on R5 updates
* Work on core updates
* Test fix
* Update model version properties file for R5
* Bump core version
* Test fixes
* Add 4.2.0-SNAPSHOT version to versions page in docs
2020-01-14 10:27:01 +08:00
62b50f06ad
Documentation fix
2020-01-14 04:44:10 +08:00
114e8f5f15
Credit for #1655
2020-01-13 13:39:47 +08:00
0c008e11be
License header version bump
2020-01-10 13:15:14 -05:00
ca3b4297e1
FIx #1649 - Account for LOINC file format changes in 2.67
2020-01-03 14:19:22 -05:00
2f3018c56e
Credit for #1603
2020-01-03 13:43:16 -05:00
82921472d4
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2020-01-03 13:43:11 -05:00
e65363f74d
Fix typo.
2020-01-03 12:31:11 -05:00
3edcb04fb1
Add atlas entry
2020-01-03 11:08:48 -05:00
48f7ee5afb
Rolling back previous unnecessary changes.
2019-12-31 09:25:56 -05:00
856993edf8
Moved changelog entry, and added clarifying comments to DateRangeParam.
2019-12-30 15:29:35 -05:00
3788136194
Credit for #1650
2019-12-27 10:02:00 -05:00
baa8eaf728
Merge pull request #1650 from jaferkhan/fix-modifier-typo
...
Correct typos in code snippets across three different files
2019-12-27 10:00:33 -05:00
4c923c6e92
Atlas update
2019-12-27 08:16:17 -05:00
27a084f061
Correct typo in code's comment. Fixes gh-1617
2019-12-27 16:25:45 +05:00
8039d68608
Fixed various typos and other minor issues in docs
2019-12-26 01:36:18 +05:00
35fbe69589
Add more text to the incomplete paragraph. Fixes gh-1638
2019-12-25 20:31:57 +05:00
ecb8da7aea
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-12-21 11:57:51 -05:00
5aa961ade7
Docs tweak
2019-12-21 11:56:31 -05:00
c03e470fcd
Credit for #1588
2019-12-21 11:37:02 -05:00
736b066884
Update David's email
2019-12-21 09:35:44 -05:00
8a1fa3ea3c
Merge pull request #1643 from jamesagnew/ja_20191219_improve_validator
...
Handle standalone validation of custom VS/CS
2019-12-19 16:38:29 -05:00
d050b7b3c2
Add changelog
2019-12-19 15:03:30 -05:00
d7240019c3
Points update from Jens
2019-12-18 19:26:48 -05:00
5db231bae1
Add style guide
2019-12-18 05:50:55 -05:00
f77428c05b
Update text on changelog
2019-12-17 11:16:16 -05:00
04b79a7b6f
Documentation updates
2019-12-16 18:52:28 -05:00
e1f2d044ed
Add errorprone back into build
2019-12-15 09:42:51 -05:00
89f819ae74
A bit more work on docs
2019-12-15 08:07:23 -05:00
ba8f50f0c8
Docs updates
2019-12-14 18:19:09 -05:00
jamesagnew
Ken Stevens
Jafer Khan
Tadgh
tungdt
Gary Graham
IanMMarshall
ianmarshall
dionmcm
Diederik Muylwyk