honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity
7,754 Commits 681 Branches 130 Tags 1.2 GiB
Commit Graph

433 Commits

Author SHA1 Message Date
James Agnew 0bf746f23b
Add support for revincludes to CapabilityStatement generator (#2521) 
* Add support for revincludes to CapabilotyStatement generator

* Add changelog

* Fixes

* Test fix

* Test fixes

* Test fix

* Test fix

* More fixes to CS cache

* Test fix

* Test fix

* Test fix
 2021-04-05 08:29:04 -04:00
jamesagnew 06bdefa16c Improve error handling 2021-03-30 07:36:08 -04:00
James Agnew 049097e5b4
Improve CapabilityStatement Generation (#2511) 
* Start work

* Work on testing

* Version bump

* Test fix

* Compile fix

* Test Fixes

* Test fix

* Test fix

* Compile fix

* Tst fix

* Test fix

* Test fix

* Test fix
 2021-03-30 05:48:03 -04:00
Eric Prud'hommeaux 939a57960d
+ informative header in structures-r4 RDFParserTest (#2474) 2021-03-30 05:37:02 -04:00
Diederik Muylwyk b720c32c1d Version bump 2021-03-29 18:23:16 -04:00
Nick Goupinets 8ead3c5f22 Code review fixes 2021-03-23 15:01:22 -04:00
Nick Goupinets de0399da23 Merge branch 'master' into 2478_add_extension_mdm_matcher 2021-03-22 09:34:32 -04:00
James Agnew dc41d5ad61
Add terminology mapping and display population interceptors (#2488) 
* Start work on code mapping interceptors

* Work on generation

* Add terminology mapping and display population interceptors

* Add changelog

* License header updates

* Test fixes

* Fix typo

* Interceptor fixes

* License header update

* Test fixes

* Mapping fixes

* Version bump

* License header updates

* Add null tests

* Add null guard

* Intermittent fix
 2021-03-21 12:03:57 -04:00
Nick Goupinets 9b94718cab Added ext util test 2021-03-20 21:22:21 -04:00
Nick Goupinets 4928e726cf Added tests for teser utils 2021-03-20 21:14:51 -04:00
Nick Goupinets 5f2c0a55b7 Merge branch '2478_add_extension_mdm_matcher' of github.com:hapifhir/hapi-fhir into 2478_add_extension_mdm_matcher 2021-03-19 18:15:43 -04:00
Nick Goupinets 5747d5d841 Initial commit 2021-03-19 09:58:15 -04:00
long 6c41ded507 fixed based on pull request comments, added tests 2021-03-18 13:59:07 -06:00
Eric Prud'hommeaux d92a6787c5
- remove-JSON-round-trip-guard (#2472) 
hapi-fhir-structures-r4/.../RDFParserTest.java included a guard to NOT
report round-trip errors if JSON didn't round-trip due to changed
ordering of contained resources (and entries in Bundles). be50a46
appears to have fixed these issues so the guard is no longer
necessary.
 2021-03-17 05:51:29 -04:00
Nick Goupinets d80a9ed848 Fixed test bug 2021-03-16 11:37:49 -04:00
Nick Goupinets f9f703abe2 Added support for additional types 2021-03-16 11:14:40 -04:00
Nick Goupinets 83acb66675 Touch for a rebuild 2021-03-15 16:16:59 -04:00
Nick Goupinets 04a0ecfc2b Added tests 2021-03-15 10:31:38 -04:00
Nick Goupinets 8c80e0838d Fixing line break problem 2021-03-12 17:48:17 -05:00
Nick Goupinets d68ee68b5d Added test 2021-03-12 10:30:12 -05:00
Nick Goupinets efae1b5e5f Added test 2021-03-11 17:44:34 -05:00
Nick Goupinets 8b8bbcc91f Refactored based on the code review 2021-03-11 17:14:01 -05:00
Nick Goupinets 23f3cc1f42 Code review 2021-03-11 14:51:13 -05:00
Nick Goupinets 8c77882da0 Merge branch 'master' into ng_validation_s13n_interceptors 2021-03-11 09:48:39 -05:00
James Agnew 807d9d53f0
Improve performance for large transactions (#2462) 
* Performance tweaks

* Work on processing speed

* Disable no longer relevant tests

* Work on performance

* Work on tests

* Work on large transaction performance

* Add changelog

* Perf tweaks

* Test fixes

* Resolve FIXME

* Fixes

* Test cleanup

* Fix broken changelog entry
 2021-03-09 18:16:02 -05:00
Nick Goupinets 052919eb33 Finished tests 2021-03-09 16:17:13 -05:00
Nick Goupinets dd47c71f44 Fixed test failures 2021-03-09 13:17:48 -05:00
Nick Goupinets ccb5b1aaad Addresses #2449 2021-03-08 17:40:16 -05:00
Tadgh 11b413ee9b Rework tests which relied on old behaviour 2021-03-01 14:19:20 -05:00
Tadgh 9dd42fa605 Remove duplicate constant 2021-03-01 14:00:20 -05:00
Tadgh 27cac16de6 Add custom mimetypes to capability statement 2021-03-01 13:54:21 -05:00
James Agnew db44244405
Fix #2426 - Include modifiers in generic search URLs for map (#2428) 2021-02-28 10:33:43 -05:00
James Agnew 3eda19c65a
Version bump (#2400) 
* Version bump

* Docs changes

* Docs tweaks

* Docs tweak

* Spelling fixes

* Docs tweaks
 2021-02-18 11:07:49 -05:00
jamesagnew 919c1dbddc Version bump to 5.3.0 2021-02-17 07:10:13 -05:00
James Agnew 65ac0e80fb
Add CapabilityStatement customizer (#2387) 
* Add CapabilityStatement customizer

* Fix javadocs
 2021-02-15 14:58:34 -05:00
James Agnew dd7a156d19
Call startOperation for paging requests (#2370) 2021-02-09 15:47:11 -05:00
James Agnew c69d741b43
Add CapbilityStatement customizing hook (#2364) 
* Add CapbilityStatement customizing hook

* Add additional method

* Interceptor service tweak
 2021-02-07 09:12:09 -05:00
James Agnew 273a5bbbd7
Add BundleUtil utility method (#2356) 2021-02-04 13:13:25 -05:00
James Agnew 92669b29da
Add elastic test (#2348) 
* Add elastic test

* Rework

* Add test
 2021-02-04 11:04:27 -05:00
James Agnew 909d9f742c
Enable Auto-reference versions in JPA (#2323) 
* Automatic reference versions

* Auto reference versions

* resolve fixmes

* Add changelog

* Test fixes

* Test fixes

* Resolve fixmes

* Work on versioning

* Add support for _includes

* Update headers

* Change visibility

* One more tweak

* One more API tweak

* Fixes

* Account for review comments

* Fix errorprone reported issue

* Test fix

* Test fixes

* Test fixes
 2021-01-27 14:49:10 -05:00
dependabot[bot] feff734736
Bump jaxb-runtime from 2.3.1 to 3.0.0 (#2289) 
* Bump jaxb-runtime from 2.3.1 to 3.0.0

Bumps jaxb-runtime from 2.3.1 to 3.0.0.

Signed-off-by: dependabot[bot] <support@github.com>

* Bump jaxb-runtime from 2.3.1 to 3.0.0

Bumps jaxb-runtime from 2.3.1 to 3.0.0.

Signed-off-by: dependabot[bot] <support@github.com>

* Add jakarta bindings

* Dependency cleanup

* More depndency cleanup

* Work on deps

* Replace transaction annotation

* Cleanup

* Another fix

* Build fix

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
 2021-01-22 11:24:23 -05:00
James Agnew 14b0688f69
Bump core version to 5.2.16 (#2308) 
* Bump core library version

* Test fix

* Build fixes

* Some test fixes

* One more bit of docs

* Build fix

* Test fix

* Test fix

* Docs fix
 2021-01-21 05:30:23 -05:00
James Agnew 874b16207f
Bundle.entry.resource.id should not be stripped on POST from client #2297 (#2303) 2021-01-19 11:12:42 -05:00
Eric Prud'hommeaux 8b338cd168
rework r4 RDF tests to skip fewer examples (#2159) 
+ relative URL resolution in RDFParser
+ test non-DomainResources in RDFParserTest
~ factor/organize RDFParserTest
~ avoid EXTERNAL shapes (for now) in shex-java
- disable the bundle-response.json example as it is apparently malformed
+ added urn:-guard to PreResourceStateHl7Org.wereBack ID update
 2021-01-16 19:15:39 -05:00
Ken Stevens 520400d6ea
added IPagingProvider.canSearchByOffset() (#2281) 
* init rev

* added IPagingProvider.canSearchByOffset()
consolidated parameters in bundle link methods

* fix refactoring error

* add @Nonnull to BundleLinks parameter

* null check

* fix test

* cleanup

* fix refactoring

* final cleanup

* review feedback

* review feedback

* review feedback
 2021-01-11 20:42:41 -05:00
James Agnew 8f8c5c31f1
Add validation rules interceptor (#2264) 
* Start work on validation rules interceptor

* Work on interceptor

* Add tests

* Work on validation interceptor

* Work on interceptor

* Test fix

* Documentation tweaks
 2021-01-01 14:29:10 -05:00
Bill Denton 84d9854e24
OSGi manifest maintenance (#2217) 
* manifest cleanup and delete Fragment-Host

* make hapi-fhir-server-empi into an OSGi bundle
 2020-12-18 16:48:44 -05:00
James Agnew f228b4a167
Fix an error parsing extensions with a value type of UUID (#2258) 2020-12-18 10:57:31 -05:00
jamesagnew 5dc12b8787 Add test for custom field parsing 2020-12-18 08:49:20 -05:00
Tadgh e79114e2ec
Un-revert the MDM changes, now that issues have been addressed (#2226) 
* Backward compatibility changes

* Revert "Revert "Remove all references to Person from EMPI.""

* Updated docs

* Removed mdm channel references

* Initial implementation

* fix coarseness bug. Fix tests. reinitialize silly bean

* Add forgotten json file

* Generic provider PoC

* Refactored provider to use BundleBuilder

* Removed version-specific MDM providers

* Addressed code review comments

* Fixed after merge

* Fixed docs

* MDM SVG for Update Use Cases

* Removed obsolete docs

Co-authored-by: Nick <nick.goupinets@smilecdr.com>
Co-authored-by: Nick Goupinets <73255752+nvg-smile@users.noreply.github.com>
 2020-12-17 10:12:53 -05:00