Commit Graph

1207 Commits

Author SHA1 Message Date
Ken Stevens 2bf680509b
DeleteConflict hook, SearchableHashMapResourceProvider, and in-memory searching (#1341)
* Make IBundle list interface more flexible

* Make matchResourceLinks visible

* Make matchResourceLinks visible

* Pull in-memory matching functionality out of subscription module into dedicated classes in searchparam module

* Added more accessors to version independent resource classes

* improved forcedid matching (needs to be verified by James)
filter out nulls from HashMapProvider.searchAll() (hopefully no tests depend on this)

* add AnyComposition

* cleanup of Any classes

* create searchparam config so people can use that module without using subscriptions

* create searchparam config so people can use that module without using subscriptions

* fix broken test

* added derivedFrom

* renamed daoRegistry.getResourceDaoIfExists to getResourceDaoOrNull
also added method to add a new dao to the registry and retrieve registered types

* TokenParam.equals

* add error check to searchable hashmap resource provider

* added support for R4

* add successor to measure

* delete conflict hook
start with failing test

* test passes.
hook is called.

* added delete conflict hook
all delete conflict tests pass

* added javadoc

* Performance test

* test bad interceptor case

* typo

* rename criteria matcher

* added support for multiple topics

* fix method name

* add effective period

* Temporarily excluding StressTest from build to try to get Travis under time limit

* change log

* review feedback

* review feedback

* review feedback
2019-06-13 13:59:51 -04:00
Ken Stevens dd203ae28f Credit for #1337 2019-06-10 11:14:52 -04:00
James Agnew c2aec5c1a9 Respect the _total parameter for all JPA searches 2019-06-09 05:44:49 -04:00
James Agnew 9500f6e6fe Roll back derby version for now 2019-06-07 16:27:19 -04:00
James Agnew cab44e9626 One more version bump for dependencies 2019-06-07 09:17:07 -04:00
James Agnew a0fa752eac A number of dependency updates 2019-06-07 09:06:30 -04:00
Ken Stevens 5752a6e2b3 reported issue with proposed fix that breaks tests (#1243)
* reported issue with proposed fix that breaks tests

* Fix spelling

* Merge my changes into this

* Correctly check referential integrity on deletes

* Add one more test
2019-06-04 20:40:20 -04:00
Diederik Muylwyk aed5bb8955
Resolve #1320: "import-csv-to-conceptmap is failing unexpectedly." (#1322)
* Reproduced issue in unit test and identified potential solution.

* Fixed using BOMInputStream.

* Added changelog.

* Added a missing word in changelog.

* Added a missing word in changelog. Take two.
2019-06-03 10:53:04 -04:00
James Agnew be06c2ee19 Correctly index timing events 2019-05-31 16:42:45 -04:00
James Agnew f6c7ff1dbb Modify expunge everything to use small batches of deletes 2019-05-31 11:05:17 -04:00
James Agnew f2467e5356 Add release notes 2019-05-30 16:36:26 -04:00
James Agnew 5e181fb214 Credit for #1303 2019-05-29 21:47:57 -04:00
James Agnew 13f3c02b2b Credit for #1244 2019-05-29 21:44:30 -04:00
James Agnew 8734af8451 Credit for #1141 2019-05-29 21:34:35 -04:00
James Agnew 96c70f6093 Credit for #1213 2019-05-29 21:22:54 -04:00
James Agnew 15a962aae7 Credit for #1152 2019-05-29 21:19:03 -04:00
James Agnew 78f12b4397 Credit for #1228 2019-05-29 20:49:15 -04:00
James Agnew f17fc4ce82 Credit for #1305 2019-05-23 09:09:44 -04:00
jamesagnew aa88816d9a Credit for #1311 2019-05-22 17:13:33 -04:00
James Agnew 202c798fcd Restore R4 server support in CLI 2019-05-16 11:56:34 +02:00
James Agnew 702ffd631d Fix #1299 - Return an HTTP 201 when creating a previously deleted
resource
2019-05-06 16:33:23 -04:00
James Agnew 8f41159eb1 Fix a potential security vulneability in the testpage overlay 2019-05-02 08:13:22 -04:00
James Agnew 5132f1f4ed COnfirm validation support comntains codesystem 2019-05-02 07:50:59 -04:00
James Agnew 8c7f065440 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-04-29 14:49:56 -04:00
James Agnew 37b9e1a42c Improve validation of enableWhen questionnaires 2019-04-29 14:43:42 -04:00
Ken Stevens 3a736924f1 fixed delete reference error message 2019-04-29 10:49:32 -04:00
James Agnew 828df1528f Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-04-26 11:24:00 -04:00
James Agnew 685adf7754 Revert Jetty upgrade, and improve patch error messages 2019-04-26 11:23:22 -04:00
Ken Stevens 130e879d04
Delete performance (#1286)
* move expunge out

* move to prototype

* turns parameters into fields

* cleanup control flow

* moved transactions outside of loops

* add expungeeverything

* moved daos out

* add expungeThreadCount

* add expungeBatchSize

* added partition runner to run in separate threads

* all done.  just need to consolidate test code.

* Moar tests

* consolidated pointcutlatch into hapi-fhir-jpaserver-model

* final cleanup

* update javadoc

* change log

* failing test

* added delete
also @Transactional

* remove unused parameter

* fix compile

* race condition

(cherry picked from commit e1940d2fb20838859a205f2b96c833b0ce9f05eb)

# Conflicts:
#	hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/expunge/PartitionRunnerTest.java

* ja feedback

* ja feedback
2019-04-25 15:38:37 -04:00
James Agnew da962b8c10 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-04-24 14:33:28 -04:00
James Agnew 738c2c1797
Interceptor framework refactoring (#1287)
Interceptor framework overhaul
2019-04-24 14:32:30 -04:00
James Agnew f2e382a132 Swap JSON Patch provider 2019-04-24 14:10:21 -04:00
James Agnew 349b16786a Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-04-17 16:51:47 -04:00
James Agnew 210d99d121 Correct validation of questionnaire enableWhen 2019-04-17 16:50:37 -04:00
Ken Stevens a57e50317d
Websocket cleanup (#1275)
* fix bug in websocket subscription (It wasn't destroying the channel when there are no subscribers)

* add support for removing channel.  Also synchronize removal (there was a race condition between sync and queue)

* keep deprecated method for backwards compatibility

* make websocket endpoint configurable

* make websocket context path configurable

* make websocket context path configurable

* trying mvn clean test instead of mvn clean install to see if the build goes faster

* that didn't work at all.  reverting.

* change log
2019-04-17 15:03:35 -04:00
jamesagnew 08a9844066 Work on #1280 2019-04-17 09:10:17 -04:00
Ken Stevens 38dd7f0687 missing tag 2019-04-16 13:28:54 -04:00
Ken Stevens 36f81731be Merge remote-tracking branch 'origin/master' 2019-04-16 12:01:34 -04:00
Ken Stevens dfcdb2b53e updating downloads page 2019-04-16 12:01:17 -04:00
James Agnew 4512c3d895 Credit for #1255 2019-04-15 17:05:56 -04:00
James Agnew c8f2e4bbc9 Return HTTP 400 for missing body on POST and PUT 2019-04-14 12:32:09 -04:00
James Agnew 706af5d579 Don't update modified time when performing NOOP update in JPA 2019-04-05 14:36:18 -04:00
Ken Stevens 081ae89a46 changelog 2019-04-03 13:42:24 -04:00
James Agnew 3eeca4a8fd Merge branch 'master' into ja_interceptor_jpa_queries 2019-04-01 09:59:03 -04:00
James Agnew e6a6c22783 Bump a few project dependencies 2019-03-31 13:57:02 -04:00
James Agnew e85bec2858
Ja inline references (#1252)
* Use a single IN clause for OR reference searches

* Add changelog

* One more attempt at getting the free port util to actually work... sigh

* One more tweak to free ports

* Bundle fix
2019-03-26 10:42:42 +01:00
James Agnew c701de2861 Create a performance interceptor framework for HAPI FHIR 2019-03-22 01:06:03 +01:00
James Agnew d1667487c2 Clean up unique composite search params 2019-03-21 21:57:38 +01:00
James Agnew 08c7afb804 Reduce logging in JPA server 2019-03-14 17:42:13 -04:00
James Agnew a8c76450e5 Re-enable contains searches on the public HAPI FHIR server and improve
message formatting in HapiLocalizer
2019-03-14 13:19:26 -04:00