honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity
7,380 Commits 670 Branches 129 Tags 1.2 GiB
Commit Graph

7380 Commits

Author SHA1 Message Date
ianmarshall 63e0c90023 Change order by clause in search query to support MySQL, MSSQL and MariaDB. 2020-12-24 13:54:37 -05:00
Bill Denton 84d9854e24
OSGi manifest maintenance (#2217) 
* manifest cleanup and delete Fragment-Host

* make hapi-fhir-server-empi into an OSGi bundle
 2020-12-18 16:48:44 -05:00
James Agnew f228b4a167
Fix an error parsing extensions with a value type of UUID (#2258) 2020-12-18 10:57:31 -05:00
jamesagnew c745fb2561 Avoid deprecated method 2020-12-18 08:49:20 -05:00
jamesagnew 5dc12b8787 Add test for custom field parsing 2020-12-18 08:49:20 -05:00
Frank Tao 89cf6e6293
Fixed the pre-expansion with filter issue (#2257) 
* Fixed the pre-expansion with filter issue

* Changed minGramSize to 3 instead of 2
 2020-12-17 23:31:33 -05:00
Tadgh e79114e2ec
Un-revert the MDM changes, now that issues have been addressed (#2226) 
* Backward compatibility changes

* Revert "Revert "Remove all references to Person from EMPI.""

* Updated docs

* Removed mdm channel references

* Initial implementation

* fix coarseness bug. Fix tests. reinitialize silly bean

* Add forgotten json file

* Generic provider PoC

* Refactored provider to use BundleBuilder

* Removed version-specific MDM providers

* Addressed code review comments

* Fixed after merge

* Fixed docs

* MDM SVG for Update Use Cases

* Removed obsolete docs

Co-authored-by: Nick <nick.goupinets@smilecdr.com>
Co-authored-by: Nick Goupinets <73255752+nvg-smile@users.noreply.github.com>
 2020-12-17 10:12:53 -05:00
Frank Tao effbd19924
Merge pull request #2240 from hapifhir/ft_support_composite_sort 
Add support for composite sorting
 2020-12-16 16:54:56 -05:00
Frank Tao de845300c2 Updated based on the review comments 2020-12-16 15:48:10 -05:00
jamesagnew d99b67820a Add to changelog 2020-12-14 14:30:20 -05:00
dependabot[bot] a689beffc5
Bump spring_version from 5.2.3.RELEASE to 5.2.9.RELEASE (#2085) 
Bumps `spring_version` from 5.2.3.RELEASE to 5.2.9.RELEASE.

Updates `spring-beans` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-context` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-context-support` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-core` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-jdbc` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-messaging` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-orm` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-test` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-tx` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-web` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-webmvc` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-websocket` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-12-14 14:29:34 -05:00
jamesagnew f4ec19f03c Add changelog 2020-12-14 10:50:33 -05:00
dependabot[bot] 092da2e93f
Bump slf4j_version from 1.7.28 to 1.7.30 (#2242) 
Bumps `slf4j_version` from 1.7.28 to 1.7.30.

Updates `slf4j-android` from 1.7.28 to 1.7.30

Updates `slf4j-api` from 1.7.28 to 1.7.30
- [Release notes](https://github.com/qos-ch/slf4j/releases)
- [Commits](https://github.com/qos-ch/slf4j/compare/v_1.7.28...v_1.7.30)

Updates `jcl-over-slf4j` from 1.7.28 to 1.7.30
- [Release notes](https://github.com/qos-ch/slf4j/releases)
- [Commits](https://github.com/qos-ch/slf4j/compare/v_1.7.28...v_1.7.30)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-12-14 10:49:19 -05:00
Kevin Dougan SmileCDR 9036df25fa
2229 - Remove support for the upload-igpack CLI command. (#2233) 
* 2229 - Remove support for the upload-igpack CLI command.

* 2229 - Revert changes made to the ValidateCommand class since it only takes an igpack as a parameter and therefore, should NOT have been removed.

* 2229 - Remove the igpack option from the Validate command.

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_3_0/2229-remove-upload-igpack-command.yaml

Co-authored-by: James Agnew <jamesagnew@gmail.com>

Co-authored-by: Kevin Dougan <kevindougan@kevins-mbp.lan>
Co-authored-by: James Agnew <jamesagnew@gmail.com>
 2020-12-14 09:50:16 -05:00
jamesagnew ab64aa540f Fix #2248 - Wrong import for Validate 2020-12-14 09:19:30 -05:00
jamesagnew 0dc0e91766 Credit for #2241 2020-12-14 06:06:07 -05:00
Vladimir Nemergut 5d43f4c35e
Use system properties in ApacheRestfulClientFactory (#2241) 
* Use system properties in ApacheRestfulClientFactory

#2192

* Add changelog entry for #2192
 2020-12-14 06:01:17 -05:00
Frank Tao 0411967e26 Added composite sort test case for R5 2020-12-11 22:25:12 -05:00
Frank Tao dcbdc83d8e Supported composite sort 2020-12-11 21:50:32 -05:00
James Agnew 81f6fe9106
Support IBaseBundle as parameetr type for @Transaction method (#2237) 
* Support IBaseBundle as parameetr type for @Transaction method

* Add changelog

* Add bundle setter
 2020-12-11 18:33:00 -05:00
Ruslan Zinovyev 368e9a9b56
Rz 20201207 remove component scan (#2228) 
* deleted component scan

* added fixme

* fix abstract bean

* fixed

* final bean fixes

* added fixes

Co-authored-by: Ken Stevens <khstevens@gmail.com>
 2020-12-11 09:18:27 -05:00
James Agnew e4d6c51290
Allow plus symbol in email address match url (#2224) 
* Allow plus symbol in email address match url

* Add changelog
 2020-12-09 21:52:03 -05:00
Tadgh a63565bd15
Merge pull request #2223 from jamesagnew/revert-2177-gg_20201105-remove-person-references 
Revert "Remove all references to Person from EMPI."
 2020-12-09 15:15:26 -05:00
Tadgh 0938d72b51
Revert "Remove all references to Person from EMPI." 2020-12-09 14:57:00 -05:00
Nick Goupinets 9bf0afd19b
Merge pull request #2177 from jamesagnew/gg_20201105-remove-person-references 
Remove all references to Person from EMPI.
 2020-12-09 12:34:47 -05:00
Nick 52fd83c654 Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-12-09 09:14:58 -05:00
jamesagnew 828573b467 Improve synchronization on HashMapResourceProvider 2020-12-09 05:53:47 -05:00
Nick b3a9ab20dc Updated wording assertion in exception tracing 2020-12-08 19:05:21 -05:00
Nick 4b610801fa Added header 2020-12-08 16:47:19 -05:00
Nick 4c7b597983 Addressed more code review comments 2020-12-08 15:32:01 -05:00
Nick efb429b319 Fixed todos and reverted FK check in the test 2020-12-08 13:00:02 -05:00
Nick aef84c9fe9 Updated docs yet again 2020-12-08 11:24:40 -05:00
Nick 6018dd0537 Fixed ambitious schema update 2020-12-08 10:44:11 -05:00
Nick d3c0944388 Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-12-07 22:02:45 -05:00
Nick 61c1b6cfb2 Updated docs 2020-12-07 19:30:18 -05:00
Nick b503d50b67 Addressed failures 2020-12-07 19:18:58 -05:00
Nick fd90eb699f Review updates 2020-12-07 18:03:56 -05:00
James Agnew fd528a0f7d
Improve error message on unsupported resource type (#2221) 
* Improve error message on unsupported resource type

* Add changelog
 2020-12-07 17:35:51 -05:00
Nick Goupinets af461cd343
Apply doc update suggestions from code review 
Co-authored-by: Ken Stevens <khstevens@gmail.com>
 2020-12-07 14:04:04 -05:00
Nick f5f7f2df14 Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-12-07 11:55:51 -05:00
James Agnew d958764d49
Partition data leaks across searches (#2220) 
* Partition data leaks across searches

* Add changelog

* Resolve FIXME

* Add test logging

* Test fix

* Test fix
 2020-12-06 16:32:07 -05:00
Nick 51b3fb0525 Synced Provider impl bw R4 and Dstu3 2020-12-04 11:57:40 -05:00
Tadgh 6799973016
Add attribution for split package fix (#2216) 2020-12-03 16:40:23 -05:00
Nick 5c40afb0c9 Updated doc headers 2020-12-03 16:11:10 -05:00
Nick 499a68a093 Reviewed docs and added change entry 2020-12-03 15:53:06 -05:00
Nick 4352e0a61f Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-12-03 11:28:21 -05:00
Tadgh a4b2fbd906
Merge pull request #2211 from bdenton/bd-20201202-fix-split-package 
Split package: delete 'ca.uhn.fhir.rest.server' package from hapi-fhir-server-empi
 2020-12-03 09:02:46 -05:00
James Agnew 1eae5db374
autoCreatePlaceholderReferenceTargets true breaks multitenancy (#2215) 
* Fix #2209 - autoCreatePlaceholderReferenceTargets true breaks multi-tenancy

* Add changelog

* Address fixme
 2020-12-03 08:53:37 -05:00
James Agnew 35f4d48eee
Fix validating capabilitystatements (#2214) 
* Fix validating capabilitystatements

* Add changelog
 2020-12-03 05:31:04 -05:00
James Agnew 7627a86176
Improve version logging (#2213) 
* Improve version logging

* Add changelog

* Test fixes
 2020-12-02 21:19:04 -05:00