cbaa39fd63
Try to reuse index rows in JPA server ( #1133 )
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* Try to reuse index rows in JPA server
* Address review comments
* One more test fix
* One more test
2018-12-05 19:25:59 -05:00
d150340d53
One more test fix
2018-12-04 19:55:14 -05:00
29af6160d6
Fix typo
2018-12-04 18:54:26 -05:00
1d3bcd9e8f
Fix indexing bug
2018-12-04 18:50:49 -05:00
d9ce0ebf7c
Unit test fix
2018-12-04 18:24:19 -05:00
8c7f249a21
Migrator enhancements and adjust reindexer to account for missing
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versions
2018-12-04 17:33:29 -05:00
c484c69664
Better error message for unqualified search parameter types
2018-12-03 13:14:10 -05:00
82f40f0423
License header updates
2018-12-03 05:22:10 -05:00
6baee4dc3f
Standalone subscription ( #1125 )
2018-11-30 17:19:16 -05:00
b2179b1696
Syntax fixes for the JPA migrator
2018-11-30 12:39:37 -05:00
364b6cc5fd
One more test fix
2018-11-22 18:40:39 -05:00
055478e1f1
Test fixes
2018-11-22 18:22:33 -05:00
ce3b7c82ce
Avoid issues when using subscription delivery in a serializing/queuing
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environment
2018-11-22 17:53:42 -05:00
d0b194f9d7
Fix two test failures
2018-11-22 08:41:12 -05:00
2e030eebaa
Make sure that reindexing happens correctly
2018-11-21 12:06:10 -05:00
e8482f5c87
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-11-20 13:59:51 -05:00
7cbad7f4e3
A bit of cleanup around subscription wiring following in-memory matcher
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landing
2018-11-20 13:59:31 -05:00
4c84b8fc89
Add a bit more test logging
2018-11-20 05:33:32 -05:00
03ebcafdf5
In-memory matcher ( #1116 )
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* Initial refactoring to move database matcher out into its own class
* MAJOR REFACTOR: Pulled indexing code out of BaseHapiFhirDao into a new class ResourceIndexedSearchParams
* Moved calculateHashes
* Replaced @Bean definitions in BaseConfig.java with @ComponentScan
Annotated bean classes with either @Service (if it's stateless) or @Component (if it's stateful). It doesn't really matter which annotation is used, but it's helpful to see at a glance whether a bean is stateful or stateless.
* Move services out of BaseHapiFhirDao
Moved services required by ResourceIndexedSearchParams out of BaseHapiFhirDao and into new classes called LogicalReferenceHelper, IdHelperService, MatchUrlService, and DaoProvider.
Converted SearchBuilder into Prototype Bean
Mark Spring components that depend on daos and entitymanagers with @Lazy so they aren't picked up by hapi-fhir-spring-boot-autoconfigure.
* Added SubscriptionMatcherInMemory
Moved static data out of BaseHapiFhirDao into ResourceMetaParams
Moved translateMatchUrl methods out of BaseHapiFhirDao into MatchUrlService bean
Simplified SubscriptionMatcherInMemory to not depend on entity or dao
Turned all subscribers into prototype beans
* Moved searchParam method out to mySearchParamProvider
Also removed dao and contest parameters from of myMatchUrlService methods
Moved code out of SearchBuilder into SearchParameterMap.clean() so it can be used by inMemoryMatcher
Introduced a new composite subscription matcher that tries to match in memory and if it finds a parameter in the criteria it doesn't support, it falls back to the database matcher.
* Added support for references
Also fixed a small bug in SearchParameterMap that was missing the ";" after "_has" when creating a normalized query from search params.
* Finished implementing all tests from FhirResourceDaoR4SearchNoFtTest
* Make in-memory matcher configurable, disabled by default
* Validate Subscription criteria when they're submitted
Send HTTP 422 UnprocessableEntityException if the criteria fail validation.
* fixed Sonar "Blocker" issues.
* Don't reload the resource before sending it out
Since we can always force a reload using restHookDetails.isDeliverLatestVersion
* Added tests to cover Custom Search param.
* Split ResourceIndexedSearchParam into separate state and service classes
* Cleaned up SearchBuilder.
Removed uses of myCallingDao as an injection mechanism.
Left // FIXME KHS cookie crumbs to clean up
* Reduced dependencies on BaseHapiFhirDao
Removed methods from IDao interface that were used for injection
* Updated change log
2018-11-19 16:19:52 -05:00
45a5db6fd8
One more fix
2018-11-19 13:31:01 -05:00
719339fc14
One more test fix
2018-11-19 10:27:16 -05:00
67dbc802be
Better detection of binary content in ResponseHighlighterInterceptor
2018-11-18 14:32:54 +01:00
fad53c6669
Fix a test
2018-11-16 13:15:14 +01:00
6a6451f694
Reduce number of queries on some DB operations
2018-11-16 12:41:50 +01:00
1de0ef405c
Clean up test compile and reenable GraphQL on hapi.fhir.org
2018-11-16 11:15:44 +01:00
84acafe3af
Streamline expunge operation
2018-11-15 11:37:16 +01:00
75210d614b
Bump to 3.7.0-SNAPSHOT
2018-11-12 22:37:52 -05:00
63af04a7b4
Prepare for 3.6.0 release
2018-11-12 05:40:55 -05:00
030b33a0f2
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-11-09 15:59:34 -05:00
4a0c45a494
License updates
2018-11-09 15:59:23 -05:00
c81a59bb9a
Only use FHIRPath to validate searchparameterr paths in R4
2018-11-09 15:57:34 -05:00
7f6f06dddf
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-11-09 15:47:22 -05:00
5834e6aa62
Test fixes
2018-11-09 15:32:55 -05:00
3942f1bb29
License header updates
2018-11-09 14:41:57 -05:00
f61df5c3fe
Use FHIRPath expression parser for custom SP validation
2018-11-09 14:41:20 -05:00
a3e79b5759
License updates only
2018-11-08 15:28:09 -05:00
3ae5f9a3b7
Build tweak
2018-11-08 14:04:21 -05:00
cca49425ae
Some work on collection processing
2018-11-08 08:56:51 -05:00
76cd3f6b47
Allow client assigned IDs to be purely numeric in JPA server if
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configured to do so
2018-11-07 18:25:50 -05:00
62145e1b74
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-11-07 11:02:02 +01:00
4b790eddb6
Add additional authorization test
2018-11-07 11:01:29 +01:00
896568c0f7
License updates
2018-11-04 16:06:53 -05:00
bc72093555
Add reindexing support based on table instead of column
2018-11-04 20:00:27 +01:00
b1283791ca
Allow JPA server to restore resources and link to them in a single
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transaction
2018-11-02 16:45:21 -04:00
1b877ac03e
Add licene headers
2018-11-01 09:15:51 -04:00
4315900ac0
Merge branch 'philips-3.6.0'
2018-11-01 09:15:27 -04:00
3bfdc61866
Fix a couple of test failures
2018-11-01 09:15:03 -04:00
3f6960d82b
Add multithreaded migrator tool
2018-11-01 05:42:51 -04:00
c8834cd29a
Merge branch 'philips-3.6.0' of github.com:jamesagnew/hapi-fhir into philips-3.6.0
2018-10-31 17:19:28 -04:00
041a4c4018
Fix SearchCoordinator tests
2018-10-31 12:36:27 -04:00
31ef4c68e1
Merge branch 'philips-3.6.0' of github.com:jamesagnew/hapi-fhir into philips-3.6.0
2018-10-31 05:51:13 -04:00
8955a9e54d
Add threading to migrator
2018-10-31 05:50:50 -04:00
7acba90d15
Update search logic
2018-10-30 22:43:16 -04:00
3d008aee5d
Make test observation lists thread safe ( #1105 )
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* Initial refactoring to move database matcher out into its own class
* MAJOR REFOACTOR: Pulled indexing code out of BaseHapiFhirDao into a new class ResourceIndexedSearchParams
* made observations lists thread safe to stop intermittent test failures
2018-10-29 15:56:47 -04:00
b66e01ce65
Allow plain server @Operation methods to declare a wildcard so that any
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opeeration invocations will be direected to them
2018-10-29 10:36:32 -04:00
794d9145e9
Move query count tests to consolidate them, and avoid an accidental
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rewrite of existing indexes in some conditions
2018-10-24 17:54:58 -03:00
f601b212ad
Performance enhancements to the JPA server and better retry logic in
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$trigger-subscription
2018-10-20 14:47:37 -04:00
c8db7fe035
Add a test
2018-10-18 15:12:22 -04:00
e00ff641b2
Increase visibility of two methods needed by the HSPC sandbox
2018-10-18 10:17:55 -04:00
da2763d8c8
Merge branch 'master' into philips-3.6.0
2018-10-17 22:38:27 -04:00
f571fc4f92
Rename DAO registry
2018-10-17 22:37:43 -04:00
b78aaea415
FIx up subscription processing
2018-10-17 21:23:52 -04:00
de76f37845
Try to fix an intermittent test failure
2018-10-17 15:49:26 -04:00
99cd4ce5f7
Allow for _total parameter
2018-10-17 09:47:35 -04:00
4b5dcce021
Add a bit of logging to subscription triggering
2018-10-17 08:32:57 -04:00
b220154e9c
Fix error in retriggeer logic
2018-10-17 07:02:51 -04:00
aa1f624132
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-10-17 05:53:46 -04:00
8130700d68
One more optimization to the subscription retriggering logic
2018-10-17 05:53:07 -04:00
d129d43635
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-10-16 21:51:50 -04:00
2c05d9c5db
Test cleanup
2018-10-16 21:51:33 -04:00
e2dfaa517f
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-10-16 20:38:21 -04:00
388bda1fec
Avoid transaction isolation level not supported by Oracle
2018-10-16 20:31:43 -04:00
47a5763fb5
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-10-16 20:25:12 -04:00
5d7142a972
Avoid intermittent test failures
2018-10-16 20:23:32 -04:00
1c1f601332
License header updates
2018-10-16 19:56:52 -04:00
0fbe897ca4
Add named beans to JPA config
2018-10-16 17:24:17 -04:00
755060f91e
Allow subscription triggering on a block of resources
2018-10-16 15:29:41 -04:00
ba6df6d55a
Handle unqualified ID in delete box for testpage overlay
2018-10-15 10:23:21 -04:00
93c545c42c
License header updates
2018-10-15 09:54:00 -04:00
483c9bff3a
Auto detect whether the appropriate dialect is selected
2018-10-15 09:53:04 -04:00
b44e96a5cd
Merge branch 'philips-3.6.0'
2018-10-15 08:37:00 -04:00
b75226914d
Fix intermittent test failure
2018-10-15 08:19:23 -04:00
6dc2dc1d6f
One more test fix
2018-10-15 07:11:10 -04:00
796b12e33e
Fix bug in $everything processing
2018-10-15 05:44:53 -04:00
8b46257423
Add warm cache module
2018-10-14 09:32:07 -04:00
51a69f0dc9
Fixes to migrator and count logic
2018-10-13 12:02:19 -04:00
a9fcfaf79a
Add a test
2018-10-10 19:11:57 -04:00
0837daecc2
One more recurring failure fix
2018-10-10 13:36:50 -04:00
e47cff2712
Fix an intermitttent test failure
2018-10-10 11:57:30 -04:00
8bd185acf2
Rename $retrigger-subscription to $trigger-subscription based on
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Diederik's suggestion
2018-10-10 10:49:50 -04:00
34bb70af65
Add validator test and allow migrator to be used for 3_3_0
2018-10-08 21:04:17 -04:00
34e943b49b
Fix bad counts when multiple parameters match
2018-10-05 13:11:09 -04:00
9c27e8e6dd
Fix an issue with the spring boot build
2018-10-04 15:12:21 -04:00
970c48ec37
A bit more test cleanup
2018-10-04 13:29:09 -04:00
8452f46b9b
More work on intermittent test failures
2018-10-04 13:16:50 -04:00
da3b4d4071
Try to fix an intermittent test failure
2018-10-04 13:07:52 -04:00
2464599a68
One more test fix
2018-10-04 09:36:10 -04:00
b265c0281b
Expand search range when searching by date
2018-10-03 21:31:01 -04:00
6ce9120132
Fix test failure in boot
2018-10-03 15:39:19 -04:00
5d5ee78873
API cleanup following JPA search performance enhancements
2018-10-03 07:43:01 -04:00
James Agnew
Ken Stevens