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4841 Commits

Author SHA1 Message Date
jamesagnew a1046f7729 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-03-12 17:46:03 -04:00
jamesagnew 7b1950aeed License headers 2019-03-12 17:45:51 -04:00
James Agnew ed4da7c414 Add setting to disable resource type target validation in JPA 2019-03-12 17:45:19 -04:00
James Agnew 6597a928d5 Fix broken test 2019-03-12 15:45:53 -04:00
James Agnew e3ecf21fa9 One more test fix 2019-03-12 13:24:18 -04:00
James Agnew 5011857219 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-03-12 13:13:34 -04:00
James Agnew 00a8f8c759 Fix broken build 2019-03-12 13:13:13 -04:00
Ken Stevens be4863133e
Pointcut parameters and Retrier log (#1236) 
* Fixed a pointcut parameter list and log an exception that was being swallowed by Retrier

* Documentation clarification
 2019-03-11 17:31:03 -04:00
James Agnew 3433ecfd14 Test fixes 2019-03-11 16:14:34 -04:00
James Agnew 71a07c0239 Refactor the way that contexts are used in narrative generator 2019-03-11 16:05:25 -04:00
James Agnew f934f76c96
Several JPA search fixes (#1231) 
* Search fixes

* Add some tests

* CHangelog

* Some cleanup of the query tracker

* FIx XML issue in changelog

* Test fixes

* SOme test fixes

* Address review comments

* Fix test breakage
 2019-03-11 15:49:34 -04:00
Ken Stevens dcfacfea49
Has param no in (#1232) 2019-03-10 20:50:24 -04:00
Ken Stevens 94021989b0 add helper method to CanonicalSubscription (#1226) 2019-03-08 09:51:42 -05:00
James Agnew 5dccf93506 Fix broken test 2019-03-06 17:15:30 -05:00
jamesagnew 490e4cb94d Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-03-06 16:14:40 -05:00
jamesagnew 64facdab0a Disabling test logging 2019-03-06 16:14:32 -05:00
James Agnew f8b8f2d1b0 Move process-message to the correct level 2019-03-06 16:12:43 -05:00
Ken Stevens a2d4c93922 Subscription matcher transactions (#1229) 
* fix bug in ResourceIndexSearchParamQuantity
Move transaction boundary around SubscriptionMatcherInterceptor so it can be overridden in subclass
Lots of CRLF changes from a mvn -P DIST

* FIXME
 2019-03-06 16:12:04 -05:00
James Agnew fd401165a9 Fix an occassional failure in the stress test 2019-03-06 09:32:37 -05:00
James Agnew 9bc0f6784d
Search paging timeout with 1500 < n < 2000 results (#1221) 
* Avoid paging links when offset is artificially set very high

* Ongoing fixes

* Adding logging and clean up transaction processing

* Add changelog

* More work on queries

* Keep working on getting tests passing

* More test fixes

* More work on tests

* More test works

* One more test attempt

* Ongoing fixes

* One more change

* FIxes to search algorithm

* Add changelog

* Clean up for review

* Fixed NPE in token matcher when system is not null and value is null

* test opposite (null system not null value)

* added null protection to all matchers

* Address review comments

* Address broken test

* Trying to resolve DB ordering issues
 2019-03-06 05:45:05 -05:00
Matti Uusitalo 5e0996d8ff Better method comment 2019-03-05 12:00:56 +02:00
Matti Uusitalo 9549a1615c Merge with origin/master 2019-03-05 11:44:30 +02:00
James Agnew 4138832071 Add a test 2019-03-01 14:03:14 -05:00
James Agnew 3972e17e62 Add "is trusted" property to server exceptions 2019-03-01 13:58:13 -05:00
James Agnew 7896887f67 Updates to transaction processing 2019-02-28 12:23:48 -05:00
jamesagnew 6e41f90bf9 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-02-27 16:49:20 -05:00
James Agnew 48c10bddc5
Narrative Generator refactoring (#1219) 
* Starting work on this

* Working on narrative templates

* Work on new narrative system

* Account for some failing tests due to refactoring of narrative mode

* Another test fix

* More test fixes

* One more test fix

* Work on searches

* Address review comments
 2019-02-27 14:59:57 -05:00
jamesagnew aef5989477 Header updates 2019-02-25 20:47:30 -05:00
James Agnew 94f9ffa977 Avoid paging links when offset is artificially set very high 2019-02-25 20:44:22 -05:00
James Agnew fb06664f70 Clean up paging query 2019-02-25 19:05:19 -05:00
James Agnew 820a3d2296 Collapse conditional UPDATES as well in JPA transactions 2019-02-22 13:49:38 -05:00
James Agnew 43c07077be Automatically remove duplicate conditional creates in JPA 2019-02-22 12:57:07 -05:00
James Agnew 89b08cd627
Improve SQL IN(..) queries (#1214) 
* First attempt, probably has compile issues

* Fix qualified searches

* Another test fix

* More test fixes

* Add changelog

* Two more fixes

* Revert SQL logging
 2019-02-20 16:38:51 -05:00
James Agnew 28b4b812ac Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-02-20 15:07:08 -05:00
James Agnew e7b7ba1a6d Add caching test 2019-02-20 11:18:02 -05:00
Ken Stevens 01568ab0b5 Fix test race condition. 2019-02-19 21:14:11 -05:00
James Agnew 72c4726328 Tweaks to the way that subscriptions are serialized 2019-02-17 19:17:51 -05:00
James Agnew bd4eb36eda
Merge pull request #1211 from jamesagnew/queue-thread-support 
changes needed to support different number of consumers in matching vs delivery
 2019-02-17 18:39:32 -05:00
Ken Stevens 3af0bc7206 changes needed to support different number of consumers in matching vs delivery 2019-02-17 15:23:01 -05:00
James Agnew fb5d94383b
Merge pull request #1210 from jamesagnew/ja_allow_multiple_canonical_subs_extensions 
Allow canonical subscription to hold multiple extensions with the same
 2019-02-16 17:11:51 -05:00
James Agnew 14e04085ae Try for a test fix and a bit of cleanup 2019-02-16 16:11:33 -05:00
James Agnew c6fcb4fcbf Allow canonical subscription to hold multiple extensions with the same 
URL
 2019-02-16 15:28:39 -05:00
James Agnew 87ed00a002 Add ability to generate named parametrrs in a version independent way 2019-02-15 16:27:16 -05:00
jamesagnew 1311ded7de Fix compile issue 2019-02-15 14:55:25 -05:00
James Agnew c0970ed46d Fix typo in test 2019-02-15 14:30:38 -05:00
James Agnew 09920ad545 Reduce thread contention during tests 2019-02-15 14:18:34 -05:00
James Agnew a35f30b18e
Merge pull request #1208 from jamesagnew/reuse-subscription-channels 
Reuse subscription channels
 2019-02-15 13:42:54 -05:00
James Agnew c4dd06ad0c Make it easier to add tables with migrator tools 2019-02-15 13:27:07 -05:00
James Agnew 4a6345d7c4 Improve command chaining in migrator tool 2019-02-15 12:54:41 -05:00
James Agnew 514ace5981 Changelog for #1209 2019-02-15 09:58:53 -05:00