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374 Commits

Author SHA1 Message Date
jamesagnew e762ac9d10 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-07-04 09:01:35 -04:00
jamesagnew b3cb533ada Store details in RequestDetails 2019-07-04 09:01:17 -04:00
James Agnew f1848fb1ad Include version ID in response for deleted resource 2019-07-03 14:44:12 -04:00
James Agnew 56aaef641c Add request ID 2019-07-02 21:32:28 -04:00
jamesagnew 742389642d Add tests for delete conflicts and authorizationinterceptor 2019-07-01 10:49:38 -04:00
jamesagnew 5c0e54fb86 Improve processing of deletes in AuthorizationInterceptor 2019-06-29 14:40:51 -04:00
jamesagnew ccf491b3ae Add parent pom to BOM 2019-06-29 13:50:43 -04:00
James Agnew 1fd99dac63
Enable optional cascading deletes on JPA server (#1363) 
* Start working on cascading deleets

* WOrk on cascading deletes

* Work on cascading deletes

* Enable cascading deletes

* Cascade deletes almost working

* FIx test

* Test fix
 2019-06-28 17:32:39 -04:00
jamesagnew 6d8465abe6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-06-27 18:23:54 -04:00
jamesagnew 5910131319 License header updates 2019-06-27 18:23:45 -04:00
James Agnew 53b47ed580 Ensure that parsed reesource is available to interceptors 2019-06-27 18:23:10 -04:00
James Agnew 10d969c514
Add Consent Service (#1359) 
* Initial consent svc

* Ongoing consent svc work

* Add docs

* Ongoing consent service work

* Work on consent service

* More work on consent svc

* License header updates

* Ongoing consent svc work

* Some test fixes

* Some test fixes

* More work on consent svc

* Tests working

* Test fix

* Propagate RequestDetails to everything in JPA server

* More interceptor tweaks

* Fix compile error

* One more tweak to captured SQL

* Ongoing interceptor tweaks

* Ongoing interceptor tweaks

* More interceptor tweaks

* Interceptor tweaks

* Tweaks to tests

* Fix tests

* Test fix

* Raise warnings when encoding extensions with missing values

* Consent service work

* More interceptor tweaks

* Consent interceptor tweaks

* Add logging to test
 2019-06-27 16:35:29 -04:00
jamesagnew e76b1dacb3 License header updates 2019-06-22 18:31:16 -04:00
James Agnew 4ad1808da3
Propagate RequestDetails to everything in JPA server (#1358) 2019-06-22 15:18:06 -05:00
James Agnew 2543f27697 Add a test 2019-06-21 15:38:16 -04:00
jamesagnew c7798fee48 Test fix 2019-06-18 05:40:00 -04:00
James Agnew 6724fd0348
Implement the $subsumes operation (#1344) 
* Implement the $subsumes operation

* Fix #976
 2019-06-17 17:31:24 -04:00
James Agnew b2e99cf035
Add support for conditional patch (#1348) 
* Add support for conditional patch

* Add changelog

* Test fix
 2019-06-17 16:12:05 -04:00
Ken Stevens 2bf680509b
DeleteConflict hook, SearchableHashMapResourceProvider, and in-memory searching (#1341) 
* Make IBundle list interface more flexible

* Make matchResourceLinks visible

* Make matchResourceLinks visible

* Pull in-memory matching functionality out of subscription module into dedicated classes in searchparam module

* Added more accessors to version independent resource classes

* improved forcedid matching (needs to be verified by James)
filter out nulls from HashMapProvider.searchAll() (hopefully no tests depend on this)

* add AnyComposition

* cleanup of Any classes

* create searchparam config so people can use that module without using subscriptions

* create searchparam config so people can use that module without using subscriptions

* fix broken test

* added derivedFrom

* renamed daoRegistry.getResourceDaoIfExists to getResourceDaoOrNull
also added method to add a new dao to the registry and retrieve registered types

* TokenParam.equals

* add error check to searchable hashmap resource provider

* added support for R4

* add successor to measure

* delete conflict hook
start with failing test

* test passes.
hook is called.

* added delete conflict hook
all delete conflict tests pass

* added javadoc

* Performance test

* test bad interceptor case

* typo

* rename criteria matcher

* added support for multiple topics

* fix method name

* add effective period

* Temporarily excluding StressTest from build to try to get Travis under time limit

* change log

* review feedback

* review feedback

* review feedback
 2019-06-13 13:59:51 -04:00
Ken Stevens 5752a6e2b3 reported issue with proposed fix that breaks tests (#1243) 
* reported issue with proposed fix that breaks tests

* Fix spelling

* Merge my changes into this

* Correctly check referential integrity on deletes

* Add one more test
 2019-06-04 20:40:20 -04:00
James Agnew 50a8c66bf5 Version bump to 4.0.0-SNAPSHOT 2019-05-30 17:13:03 -04:00
jamesagnew 73aa53be8f Release 3.8.0 2019-05-30 16:50:04 -04:00
James Agnew 86aa71d570
Merge branch 'master' into deprecated 2019-05-29 21:42:02 -04:00
James Agnew 66a669949d Add docs - Fix #1309 2019-05-29 21:16:33 -04:00
James Agnew cb8634f26f
Ja interceptor callback fix (#1308) 
* Interceptor callback fix

* Ensure that interceptor methods are called after a transaction
 2019-05-14 18:47:11 -04:00
James Agnew 2e50bf6bb0 Un-deprecate a method that should not have been deprecated 2019-05-04 09:49:18 -04:00
James Agnew f3f5c570b1 A couple of compile glitches 2019-04-24 21:35:49 -04:00
James Agnew 5a9fa4e549 Interceptor tweaks 2019-04-24 21:19:47 -04:00
James Agnew 738c2c1797
Interceptor framework refactoring (#1287) 
Interceptor framework overhaul
 2019-04-24 14:32:30 -04:00
James Agnew c8f2e4bbc9 Return HTTP 400 for missing body on POST and PUT 2019-04-14 12:32:09 -04:00
Drew Mitchell ce44c35afc Add @Deprecated annotation to IServerInterceptor::outgoingResponse(RequestDetails, IBaseResource, HttpServletRequest, HttpServletResponse) to match comment. 2019-03-18 21:35:36 -04:00
jamesagnew 64facdab0a Disabling test logging 2019-03-06 16:14:32 -05:00
James Agnew 3972e17e62 Add "is trusted" property to server exceptions 2019-03-01 13:58:13 -05:00
James Agnew 94f9ffa977 Avoid paging links when offset is artificially set very high 2019-02-25 20:44:22 -05:00
James Agnew c6fcb4fcbf Allow canonical subscription to hold multiple extensions with the same 
URL
 2019-02-16 15:28:39 -05:00
James Agnew 485335e975 Allow terminology service to work without having Lucene enabled for 
simple ValueSet expansions
 2019-02-14 20:47:28 -05:00
James Agnew 810f1ad969 Improvements to elements parameter as well as adding attributes to 
RequestDetails
 2019-02-07 16:45:59 -05:00
James Agnew 0f8c8d18e2 Bump version to 3.8.0-SNAPSHOT 2019-02-06 20:02:28 -05:00
jamesagnew 207015c3af Version bump to 3.7.0 2019-02-05 21:36:38 -05:00
James Agnew 4498335ae5 Elements query cleanup 2019-02-05 14:16:47 -05:00
jamesagnew d4af1ee2a3 Add tests and license headers 2019-02-04 16:34:39 -05:00
James Agnew e401ec86e4
Enhanced elements (#1192) 
Squashed merge: Add elements exclude mode

* Start working on elements enhancement

* Work on elements projection

* Work on elements filter

* Feature is now working

* Just some cleanup

* Address compile issues
 2019-02-03 16:41:33 -05:00
James Agnew 9cf64f78d0 Deprecate a bad setter on RetfulServer, fix a paging issue, and add a 
disabled unit test to the subscription matcher
 2019-01-21 14:46:17 -05:00
jamesagnew cd1e0e881c Add headers 2019-01-19 18:31:17 -05:00
James Agnew b8755615b2 Allow AuthorizationInterceptor to read patients if the user has read 
access to the individual instance
 2019-01-14 13:53:08 -06:00
James Agnew 93bf2788ec Add subscription narrowing interceptor and refactor RuleBuilder to be a 
bit cleaner
 2019-01-12 14:23:26 -06:00
James Agnew aee7b2b882 Make sure that sub-request transaction searches and reads preserve HTTP 
headers
 2019-01-10 07:26:04 -07:00
James Agnew ee52d6fb31 Add SearchNarrowingInterceptor 2019-01-09 20:20:46 -06:00
Stig Rohde Døssing f8b232bb67 Issue 430: Generate OperationDefinitions for named queries, fix minor errors in generation of OperationDefinition for operations. Closes #430. 2019-01-09 05:41:08 -05:00
James Agnew 62ae71c1c6 Allow authorizing delete operations via a transaction in 
AuthorizationInterceptor
 2019-01-07 15:43:36 -05:00
jamesagnew a8a97ae6b2 Two test fixes 2019-01-07 09:18:11 -05:00
jamesagnew 3d94761bcb Improve response for transactions 2019-01-06 18:08:32 -05:00
jamesagnew b2c7a2003e Prevent a nullpointerexception in AuthorizationInterceptor 2019-01-06 16:42:29 -05:00
jamesagnew 39f2062802 FIx errorprone detected issues 2019-01-05 13:43:55 -05:00
jamesagnew 8f8385627f Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-01-05 11:33:08 -05:00
jamesagnew 98d93df12a License header updates 2019-01-04 16:22:15 -05:00
James Agnew 5b8fee869e Add config options for default Prefer header and _total param on server 2019-01-04 16:12:45 -05:00
Corina Dalaban 3a3d503772 head operation should return 200OK response code instead of 400 
BadRequest
 2018-12-21 05:40:35 -05:00
Ken Stevens 84a34eb3c9
Subscription module support (#1147) 
* Reorganizing packages and dependencies to support standalone subscription running within a CDR container where all hapi modules are on the classpath.

Moved Subscription registry out of interceptor and introduced SubscriptionLoader

* Created ActiveSubscription and moved cache bits into it

* Moved ExecutorQueue stuff out into its own class

* Add test and supporting code to validate SubscriptionConstants.EXT_SUBSCRIPTION_RESTHOOK_DELIVER_LATEST_VERSION behaviour

* Added SubscriptionCheckingSubscriber

* Moved a few beans to @ComponentScan

* Replaced use of beanFactory with concrete factory classes

* Switched test to use subscribablechannel

* Added SubscriptionLoaderFhirClientTest

* Confirm that our SubscriptionProviderFhirClient works with a live fhir client

* Register interceptors with DaoConfig instead of RestServer.
Also, Rename @VisibleForTesting methods with ForUnitTest

* Fix triggering service so it uses new subscriptionmatcherinterceptor

* Renamed "Database" classes to "Dao"

* processing -> matching naming change
 2018-12-18 13:09:06 -05:00
jamesagnew 81e8131ffc Fix broken test 2018-12-09 19:36:03 -05:00
James Agnew 67f5ba6aa0 Also allow ServeMediaResourceRawInterceptor to handle vread requests 2018-12-09 14:29:40 -05:00
James Agnew 19954fa252 Resolve failing test 2018-12-09 14:09:12 -05:00
James Agnew b442982310 Add media interceptor 2018-12-08 18:49:58 -05:00
James Agnew b2179b1696 Syntax fixes for the JPA migrator 2018-11-30 12:39:37 -05:00
James Agnew b41c222880 Require explicit declaration of authorizationinterceptor operation rules 
on whether the response is authorized or not
 2018-11-23 14:25:46 -05:00
James Agnew ce3b7c82ce Avoid issues when using subscription delivery in a serializing/queuing 
environment
 2018-11-22 17:53:42 -05:00
James Agnew 2e030eebaa Make sure that reindexing happens correctly 2018-11-21 12:06:10 -05:00
James Agnew 58388bb614 Allow client to return methodoutcome instead of resdource for operation 
call
 2018-11-19 11:11:49 +01:00
James Agnew 67dbc802be Better detection of binary content in ResponseHighlighterInterceptor 2018-11-18 14:32:54 +01:00
James Agnew fad53c6669 Fix a test 2018-11-16 13:15:14 +01:00
James Agnew 0d0f67b299 Add GraphQL support to public server 2018-11-16 11:41:39 +01:00
James Agnew 02b23d74fd
Merge pull request #1117 from magnuswatn/logformatfix 
Fixed small log formatting error in ExceptionHandlingInterceptor.java
 2018-11-15 13:38:07 +01:00
Magnus Watn 52265d248f Fixed log formatting error 2018-11-15 12:14:33 +01:00
James Agnew 75210d614b Bump to 3.7.0-SNAPSHOT 2018-11-12 22:37:52 -05:00
James Agnew 63af04a7b4 Prepare for 3.6.0 release 2018-11-12 05:40:55 -05:00
jamesagnew a3e79b5759 License updates only 2018-11-08 15:28:09 -05:00
James Agnew 17a7fd4285
Merge pull request #1071 from volsch/master 
Multiple values of a HTTP header are reduced to one value.
 2018-11-08 13:27:36 -05:00
James Agnew 4b790eddb6 Add additional authorization test 2018-11-07 11:01:29 +01:00
James Agnew 4315900ac0 Merge branch 'philips-3.6.0' 2018-11-01 09:15:27 -04:00
James Agnew 3bfdc61866 Fix a couple of test failures 2018-11-01 09:15:03 -04:00
jamesagnew 3f6960d82b Add multithreaded migrator tool 2018-11-01 05:42:51 -04:00
jamesagnew 31ef4c68e1 Merge branch 'philips-3.6.0' of github.com:jamesagnew/hapi-fhir into philips-3.6.0 2018-10-31 05:51:13 -04:00
jamesagnew 8955a9e54d Add threading to migrator 2018-10-31 05:50:50 -04:00
James Agnew 7acba90d15 Update search logic 2018-10-30 22:43:16 -04:00
James Agnew 6b1ea5b989 Add tests for operation method binding 2018-10-30 15:22:39 -04:00
James Agnew b66e01ce65 Allow plain server @Operation methods to declare a wildcard so that any 
opeeration invocations will be direected to them
 2018-10-29 10:36:32 -04:00
James Agnew aa177c1421 Authorize batch operation in AuthorizationInterceptor 2018-10-19 09:45:56 -04:00
James Agnew da2763d8c8 Merge branch 'master' into philips-3.6.0 2018-10-17 22:38:27 -04:00
James Agnew 99cd4ce5f7 Allow for _total parameter 2018-10-17 09:47:35 -04:00
James Agnew 4e252063b8 Allow transactions and batches with transaction permission in 
AuthorizationInterceptor
 2018-10-16 19:54:55 -04:00
James Agnew 796b12e33e Fix bug in $everything processing 2018-10-15 05:44:53 -04:00
James Agnew 51a69f0dc9 Fixes to migrator and count logic 2018-10-13 12:02:19 -04:00
James Agnew ca54409ce3 Add some null checks to the RestfulServer 2018-10-05 08:33:00 -04:00
James Agnew 62d6771814 Use a select count query for summary count searches in JPA server 2018-09-29 21:58:14 -04:00
James Agnew 3e445faf47 Squashed commit of the following: 
commit df641506885e09e63f80efc6c658d01a1a3a8142
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sat Sep 29 13:47:22 2018 -0400

    Shrink validation resources

commit 4c1550eafa26f4235b4b8804741aecc03276b5c6
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 22:45:28 2018 -0400

    Updates to get R4 working

commit 8332f15291006691ed9b07ead3e3524b0fc85510
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 09:02:13 2018 -0400

    Ongoing work on gettign R4 working

commit f7146cab7aed937bb625a8aec95744d76db00041
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 05:21:01 2018 -0400

    More work on sync

commit f48de4a10b1bab2584fee813017d9b27b237bfa9
Merge: 9e4f3cc722 aacb78b779
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:11:29 2018 -0400

    Merge branch 'sync_r4' of github.com:jamesagnew/hapi-fhir into sync_r4

commit 9e4f3cc722668aae31a77b19bf9b032af3ae01b0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:11:19 2018 -0400

    Fix compile error

commit 7ec29e0ceda8f9013cbabb95767cbe15b4b81303
Merge: 23f7517325 002c4b3ff7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:04:23 2018 -0400

    Merge branch 'master' into sync_r4

commit aacb78b7793ab2c71e0a2a774240ee2b5d3f9e7f
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:01:42 2018 -0400

    Keep working on getting R4 building

commit 4950de46d99897e74d41dfdb10d3d8a3435cb0c9
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Tue Sep 25 13:11:27 2018 -0400

    Ongoing work to get R4 working

commit 819d69c20e112dd3c72569ec50114ddb8263c300
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 20 08:15:36 2018 -0400

    Work on getting build working

commit 2c61b6cd1205ced5d7b822cf10942c69272ea078
Merge: 16b5bb06c8 dfb4de86f1
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 20 05:16:53 2018 -0400

    Merge branch 'master' into sync_r4

commit 16b5bb06c8cdaf8d67c3b80f5aa9be9fccd99aef
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Mon Sep 17 05:30:39 2018 -0400

    Work on R4 sync

commit 23f7517325a14dd2ca1eb5641296ead2776634ae
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Sep 16 10:19:00 2018 -0400

    Work on sync

commit 6cc413c1f1dea538295aa4c16c21a5677494ac4c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 14 17:28:28 2018 -0400

    Work on R$ sync

commit df6f6ad2ce783b07ccc383134705d874bc5d2cf1
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Sep 14 08:33:07 2018 -0400

    Work on R4
 2018-09-29 13:48:35 -04:00
James Agnew 706e004b9d Bump to 3.6.0-SNAPSHOT 2018-09-19 10:24:48 -04:00
jamesagnew 321e88c811 License header updates 2018-09-14 05:25:07 -04:00
James Agnew ce6a9dbc36 Fix regression from new jetty version 2018-09-11 08:27:34 -04:00
James Agnew daef975734 Version bump to 3.5.0 2018-09-08 07:22:21 +08:00
Volker Schmidt b183bed52f Multiple values for one HTTP header were reduced to the last value. 2018-09-06 19:33:34 +08:00
James Agnew 54c07263b6 Increase code lengths 2018-08-26 12:32:35 -04:00
jamesagnew df651c830e Remove dynamic mode 2018-08-19 17:35:08 -04:00
James Agnew 78a7d64d2c
Merge pull request #1022 from alinleonard/master 
Patch operation on OperationsWhichAllowPreferHeader
 2018-08-12 17:55:16 -04:00
jamesagnew 7eb36c3392 Work on subscription 2018-08-11 16:14:53 -04:00
jamesagnew 159377ac16 Add details to ResponseHighlighterInterceptor 2018-08-11 13:46:34 -04:00
jamesagnew 20b1f883ba Add extendible methods to RestfulServer 2018-08-08 17:21:25 -04:00
jamesagnew d9296b8e42 Add hook for error message 2018-08-08 15:14:39 -04:00
jamesagnew 6586fc438d Fix concurrency issue in hashmap 2018-08-03 13:00:57 -04:00
James Agnew 4eb3281fa6 Merge branch 'client_enhancements' 2018-07-30 18:34:49 -04:00
James Agnew d6293cf9b3 Merge branch 'client_enhancements' 2018-07-30 09:42:38 -04:00
James Agnew db0f082222
Merge pull request #996 from anamariaradu10/master 
Changes regarding behavior for Prefer header
 2018-07-30 09:16:20 -04:00
James Agnew d50dda19ae
Merge pull request #912 from InfiniteLoop90/911-contains-modifier 
Fixes #911 - Adds support for :contains modifier
 2018-07-30 05:39:27 -04:00
jamesagnew fc9f2ec0fb FIx test issue 2018-07-29 18:20:09 -04:00
James Agnew 518092cbd4 More updates 2018-07-29 17:10:26 -04:00
anamariaradu10 3a5556006b
Merge branch 'master' into master 2018-07-27 16:59:52 +03:00
Ana Maria Radu 9c39733aff Fixed issues 2018-07-27 16:48:44 +03:00
James Agnew f03d6b7c22 Allow configuration of default page size in SimpleBundleProvider 2018-07-27 18:34:12 +07:00
James Agnew d04db790a3 Try to fix permissions issues in travis 2018-07-27 08:39:22 +07:00
James Agnew a4e4111376 Fix a unit test 2018-07-26 18:08:59 +07:00
James Agnew 3c80238f0e Ongoing work on interceptors 2018-07-24 17:22:21 +07:00
James Agnew 23083a9283 Improvements to client and SP indexing in JPA server 2018-07-23 17:37:49 +09:00
James Agnew b4aa4c0e89 Add protection against HTML injection attacks 2018-07-19 08:56:22 -04:00
James Agnew e6ca408f67 Permissions for operations 2018-07-12 18:40:15 -04:00
Alin de701a6b7f added patch for operation outcome 2018-07-09 15:35:50 +03:00
jamesagnew 6d83edabb6 License header updates 2018-07-01 20:59:04 -04:00
James Agnew 495fd9f68e Add support for patch in AuthorizationInterceptor 2018-07-01 11:46:11 -04:00
jamesagnew b3f7ab274d License header updates 2018-06-21 14:44:34 -04:00
James Agnew ed0b5f54a5 More authorizationinterceptor tweaks for better security 2018-06-12 21:52:01 +08:00
Ana Maria Radu dc476aeeea In my opinion these changes should be made in order to have the behavior 
for the Prefer header values as the one explained in the official
documentation from https://www.hl7.org/fhir/http.html
 2018-06-12 14:04:05 +03:00
James Agnew cc0e836680
Auth interceptor early checks (#995) 
* Validator fix

* Enhance AuthorizationInterceptor so that it tries to deny access earlier
for compartment searches that are outside the allowable compartment.

* FIx DSTU2 test that wasn't updated

* More test fixes
 2018-06-10 17:48:20 -04:00
James Agnew e7804b881c Fix CI issue 2018-06-06 11:39:06 -04:00
jamesagnew 3583dfd503 Correctly include project description in capabilitystatement 2018-06-03 16:19:33 -04:00
Diederik Muylwyk 0e2c57fa60 Bumping version. 2018-05-28 17:44:38 -04:00
Diederik Muylwyk 2871920734 Preparing release. 2018-05-28 10:45:47 -04:00
jamesagnew 67f21426cb Disable content header on response for non-create operations 2018-05-25 07:28:01 -04:00
jamesagnew b146a80502 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-05-23 16:09:34 -04:00
jamesagnew 92dc258c6e Update license headers 2018-05-23 16:09:23 -04:00
James Agnew 0544692dde Don't include bogus powered by header 2018-05-23 13:12:27 -04:00
James Agnew 7f85608a2e Fix accidental regression 2018-05-23 08:17:59 -04:00
James Agnew 2f2900e837 Improve indexing on JPA server in anticipation of a new indexing 
strategy in HAPI FHIR 3.5.0
 2018-05-23 08:09:57 -04:00
patrick-werner eef3267bb8 Forward the cause of the InvocationTargetException to the REST layer. 
Discovered through #938
 2018-05-17 17:38:23 +02:00
James Agnew 833cfd6988 Refactor information message 2018-05-16 17:35:40 -04:00
James Agnew d29a9a7f96 AutohrizationInterceptor should correctly recognize type-level operation 
invocations
 2018-05-15 16:14:10 -04:00
jamesagnew ccb859fdbe FIxes to get the synced build working 2018-05-13 08:08:34 -04:00
James Agnew b17eebd8d2 Squashed commit of the following: 
commit 2be11651c2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 11:50:53 2018 -0400

    Update changelog

commit b3bb5f9052
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 11:19:28 2018 -0400

    Parameter updates

commit f6b1082ba4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 07:24:30 2018 -0400

    More test fixes

commit 81a69c265f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:26:48 2018 -0400

    Fix compile error

commit 935938e92c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:25:18 2018 -0400

    Another test fix

commit 43568a1f8d
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:18:06 2018 -0400

    Fix compile error

commit e95894e643
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:13:50 2018 -0400

    More work on tests

commit 9393fb8f4f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 05:36:27 2018 -0400

    One more fix

commit 437f5051e4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 21:32:10 2018 -0400

    Work on validator

commit 20c51add4f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 19:34:10 2018 -0400

    Validator fix

commit 7bf2b0a0e9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 18:44:04 2018 -0400

    Fix test

commit adc73e75c9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 17:22:34 2018 -0400

    Merge validator
 2018-05-10 11:53:32 -04:00
Diederik Muylwyk 14a070a47e
927 cli tooling is needed for creating and maintaining conceptmaps using csvs (#934) 
CLI tooling for import/export of ConceptMaps using CSVs has been implemented.
 2018-05-10 11:12:45 -04:00
jamesagnew e299b062a6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-04-24 19:14:56 -04:00
jamesagnew f1db751d1e Update headers 2018-04-24 19:14:33 -04:00
James Agnew 09b1f547d0 Add expunge 2018-04-24 15:11:00 -04:00
James Agnew a21d0a7752 Add auth tester methods 2018-04-22 19:30:09 -04:00
Clayton Bodendein ac8e412e49 Fixes #911 - Adds support for :contains modifier 
Adds support for the :contains modifier in StringClientParam.
 2018-03-30 23:49:06 -05:00
jamesagnew c5b286921e Tests all passing 2018-03-30 15:18:57 -04:00
jamesagnew 180336e076 Sync to master 2018-03-29 06:54:24 -04:00
jamesagnew 418e82032f Prep for 3.3.0 2018-03-29 05:48:13 -04:00
James Agnew e9ee87210a
Merge pull request #806 from honestica/quickfix-imcompartment 
fix inCompartment for a collection of owners
 2018-03-19 06:16:12 -04:00
patrick-werner ff04ab3358 ${argLine} -> [at]{argLine} 
see:
http://maven.apache.org/surefire/maven-surefire-plugin/faq.html#late-property-evaluation
 2018-03-19 10:45:33 +01:00
jamesagnew 7e4877c524 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-03-01 06:20:46 -05:00
jamesagnew a6e59a0f76 License header updates 2018-03-01 06:20:37 -05:00
James Agnew 790aaeb4ea Tests for #872 2018-02-28 21:34:32 -05:00
James Agnew 458401864b Handle deletes properly in HashMapResourceProvider 2018-02-25 14:20:04 -05:00
James Agnew 84c72203b7 Add HashMapResourcePrvider 2018-02-25 13:16:02 -05:00
jamesagnew a395e48cd4 Don't crash when a multitenant server has a request for / 2018-02-04 18:44:37 -05:00
James Agnew 17b1ff727e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-02-03 15:48:09 -05:00
James Agnew 3cbf669007 Don't crash on startup if an invalid subscription is in the database 2018-02-03 15:47:48 -05:00
jamesagnew 1d541c1588 Formatting issues 2018-02-02 14:03:53 -05:00
jamesagnew a16ac6ec87 Merge changes 2018-02-02 13:21:05 -05:00
jamesagnew 351a2fc2f1 Fix #837 - Use non-legacy content-type for plain json and xml accept 
header
 2018-02-02 06:43:19 -05:00
jamesagnew 3f1ef0e7f6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-02-01 06:33:00 -05:00
jamesagnew 17edf5e727 FIx some license headers 2018-02-01 06:31:21 -05:00
James Agnew b61887e841 Improve performance of base64 validation 2018-01-30 17:37:12 -06:00
James Agnew 1c5a07b5a0 Fix #822 - Respect chained method params in a transaction search 2018-01-30 16:20:25 -06:00
James Agnew e52f582769 An experimental interceptor called VersionedApiConverterInterceptor has been added, which automaticaly converts response payloads to a client-specified version according to transforms built into FHIR. 2018-01-29 12:10:05 -06:00
James Agnew 044b9f584a Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-01-28 14:02:53 -06:00
James Agnew f976b7bf7e Add new interceptor method which enabled interceptors to modify response 2018-01-28 14:01:20 -06:00
jamesagnew 2e4f80d7a3 Fix #831 - Remove useless TagListParam annotation 2018-01-26 10:03:21 -05:00
jamesagnew 5750cfd03c Prevent double calling server interceptor methods under certain 
conditions
 2018-01-26 07:44:13 -05:00
jamesagnew ede32b6acc Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-01-23 11:33:52 -05:00
jamesagnew c081f7c15d More rule fixes 2018-01-23 11:33:31 -05:00
James Agnew 0677f35847 Implement tenant ID checking in authorizationinterceptor 2018-01-23 11:32:35 -05:00
James Agnew 16038ece26 Version bump to 3.3.0-SNAPSHOT 2018-01-23 10:31:01 -05:00
James Agnew 4fd3e20d06 Remove duplicate resource body creation (Merge branch 'optimize_jpa') 2018-01-21 18:16:11 +08:00
jamesagnew 001bdbc07e Version bump to 3.2.0 2018-01-13 04:07:57 -05:00
James Agnew 6468ca474a Verion bump to 3.2.0 2018-01-13 02:14:33 -05:00
James Agnew f6c9e3d0fe Add multitenancy support for server 2018-01-11 11:14:54 -05:00
jamesagnew b0e196e5cf Merge branch 'master' into optimize_jpa 2018-01-10 06:27:15 -05:00
James Agnew d375977410 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-01-08 14:14:42 -05:00
James Agnew 9a72927dbc Fix #808 - Use version from meta if not found in the resource ID 2018-01-08 14:07:27 -05:00
jamesagnew 0352d48720 Bump copyright message to 2018 2018-01-08 13:52:15 -05:00
jamesagnew 6fc88caa51 More work on optimizing JPA 2018-01-08 07:15:58 -05:00
James Agnew 377bae8c16 Allow interceptors to modify request contents 2018-01-06 14:27:32 -05:00
James Agnew b18e71d4f5 Added new callbacks to IServerOperationInterceptor to be invoked before 
other operation methods
 2017-12-23 17:13:33 -05:00
Jiajing LIANG cc40d47d2a fix inCompartment for a collection of owners 2017-12-14 17:29:27 +01:00
James Agnew 6c85cd1375 Improve documentation and mark redundant methods as deprecated in 
IServerInterceptor
 2017-12-12 21:45:54 -05:00
jamesagnew d710682fed Fix searching in JPA with _id and _content params 2017-12-05 07:25:34 -05:00
James Agnew 3e296f9d1b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-11-25 17:53:01 -05:00
James Agnew 6afe6804db Fix #796 - Correctly escape spaces in generated URLs 2017-11-25 17:52:12 -05:00
jamesagnew 5b909b4746 Version bump to 3.2.0-SNAPSHOT 2017-11-24 13:32:47 -05:00
jamesagnew 42dd34252d Version bump to 3.1.0 2017-11-23 13:27:21 -05:00
James Agnew 4887f18bb3 Further refine #762 2017-11-23 11:05:11 -05:00
jamesagnew ffac599a30 Credit and tests for #762 2017-11-23 06:42:10 -05:00