Commit Graph

1041 Commits

Author SHA1 Message Date
James Agnew d150340d53 One more test fix 2018-12-04 19:55:14 -05:00
James Agnew 1d3bcd9e8f Fix indexing bug 2018-12-04 18:50:49 -05:00
James Agnew d9ce0ebf7c Unit test fix 2018-12-04 18:24:19 -05:00
James Agnew 8c7f249a21 Migrator enhancements and adjust reindexer to account for missing
versions
2018-12-04 17:33:29 -05:00
James Agnew c484c69664 Better error message for unqualified search parameter types 2018-12-03 13:14:10 -05:00
Ken Stevens 6baee4dc3f
Standalone subscription (#1125) 2018-11-30 17:19:16 -05:00
James Agnew 364b6cc5fd One more test fix 2018-11-22 18:40:39 -05:00
James Agnew 055478e1f1 Test fixes 2018-11-22 18:22:33 -05:00
James Agnew ce3b7c82ce Avoid issues when using subscription delivery in a serializing/queuing
environment
2018-11-22 17:53:42 -05:00
James Agnew d0b194f9d7 Fix two test failures 2018-11-22 08:41:12 -05:00
James Agnew 2e030eebaa Make sure that reindexing happens correctly 2018-11-21 12:06:10 -05:00
James Agnew e8482f5c87 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-11-20 13:59:51 -05:00
James Agnew 7cbad7f4e3 A bit of cleanup around subscription wiring following in-memory matcher
landing
2018-11-20 13:59:31 -05:00
jamesagnew 4c84b8fc89 Add a bit more test logging 2018-11-20 05:33:32 -05:00
Ken Stevens 03ebcafdf5
In-memory matcher (#1116)
* Initial refactoring to move database matcher out into its own class

* MAJOR REFACTOR: Pulled indexing code out of BaseHapiFhirDao into a new class ResourceIndexedSearchParams

* Moved calculateHashes

* Replaced @Bean definitions in BaseConfig.java with @ComponentScan

Annotated bean classes with either @Service (if it's stateless) or @Component (if it's stateful).  It doesn't really matter which annotation is used, but it's helpful to see at a glance whether a bean is stateful or stateless.

* Move services out of BaseHapiFhirDao

Moved services required by ResourceIndexedSearchParams out of BaseHapiFhirDao and into new classes called LogicalReferenceHelper, IdHelperService, MatchUrlService, and DaoProvider.

Converted SearchBuilder into Prototype Bean

Mark Spring components that depend on daos and entitymanagers with @Lazy so they aren't picked up by hapi-fhir-spring-boot-autoconfigure.

* Added SubscriptionMatcherInMemory

Moved static data out of BaseHapiFhirDao into ResourceMetaParams

Moved translateMatchUrl methods out of BaseHapiFhirDao into MatchUrlService bean

Simplified SubscriptionMatcherInMemory to not depend on entity or dao

Turned all subscribers into prototype beans

* Moved searchParam method out to mySearchParamProvider

Also removed dao and contest parameters from of myMatchUrlService methods

Moved code out of SearchBuilder into SearchParameterMap.clean() so it can be used by inMemoryMatcher

Introduced a new composite subscription matcher that tries to match in memory and if it finds a parameter in the criteria it doesn't support, it falls back to the database matcher.

* Added support for references

Also fixed a small bug in SearchParameterMap that was missing the ";" after "_has" when creating a normalized query from search params.

* Finished implementing all tests from FhirResourceDaoR4SearchNoFtTest

* Make in-memory matcher configurable, disabled by default

* Validate Subscription criteria when they're submitted

Send HTTP 422 UnprocessableEntityException if the criteria fail validation.

* fixed Sonar "Blocker" issues.

*  Don't reload the resource before sending it out

Since we can always force a reload using restHookDetails.isDeliverLatestVersion

* Added tests to cover Custom Search param.

* Split ResourceIndexedSearchParam into separate state and service classes

* Cleaned up SearchBuilder.

Removed uses of myCallingDao as an injection mechanism.
Left // FIXME KHS cookie crumbs to clean up

* Reduced dependencies on BaseHapiFhirDao

Removed methods from IDao interface that were used for injection

* Updated change log
2018-11-19 16:19:52 -05:00
James Agnew 719339fc14 One more test fix 2018-11-19 10:27:16 -05:00
James Agnew 67dbc802be Better detection of binary content in ResponseHighlighterInterceptor 2018-11-18 14:32:54 +01:00
James Agnew 6a6451f694 Reduce number of queries on some DB operations 2018-11-16 12:41:50 +01:00
James Agnew 5834e6aa62 Test fixes 2018-11-09 15:32:55 -05:00
James Agnew f61df5c3fe Use FHIRPath expression parser for custom SP validation 2018-11-09 14:41:20 -05:00
James Agnew 3ae5f9a3b7 Build tweak 2018-11-08 14:04:21 -05:00
James Agnew cca49425ae Some work on collection processing 2018-11-08 08:56:51 -05:00
James Agnew 76cd3f6b47 Allow client assigned IDs to be purely numeric in JPA server if
configured to do so
2018-11-07 18:25:50 -05:00
James Agnew bc72093555 Add reindexing support based on table instead of column 2018-11-04 20:00:27 +01:00
James Agnew b1283791ca Allow JPA server to restore resources and link to them in a single
transaction
2018-11-02 16:45:21 -04:00
James Agnew 4315900ac0 Merge branch 'philips-3.6.0' 2018-11-01 09:15:27 -04:00
James Agnew 3bfdc61866 Fix a couple of test failures 2018-11-01 09:15:03 -04:00
jamesagnew 3f6960d82b Add multithreaded migrator tool 2018-11-01 05:42:51 -04:00
James Agnew 041a4c4018 Fix SearchCoordinator tests 2018-10-31 12:36:27 -04:00
James Agnew 7acba90d15 Update search logic 2018-10-30 22:43:16 -04:00
Ken Stevens 3d008aee5d
Make test observation lists thread safe (#1105)
* Initial refactoring to move database matcher out into its own class

* MAJOR REFOACTOR: Pulled indexing code out of BaseHapiFhirDao into a new class ResourceIndexedSearchParams

* made observations lists thread safe to stop intermittent test failures
2018-10-29 15:56:47 -04:00
James Agnew b66e01ce65 Allow plain server @Operation methods to declare a wildcard so that any
opeeration invocations will be direected to them
2018-10-29 10:36:32 -04:00
James Agnew 794d9145e9 Move query count tests to consolidate them, and avoid an accidental
rewrite of existing indexes in some conditions
2018-10-24 17:54:58 -03:00
James Agnew f601b212ad Performance enhancements to the JPA server and better retry logic in
$trigger-subscription
2018-10-20 14:47:37 -04:00
James Agnew da2763d8c8 Merge branch 'master' into philips-3.6.0 2018-10-17 22:38:27 -04:00
James Agnew b78aaea415 FIx up subscription processing 2018-10-17 21:23:52 -04:00
James Agnew de76f37845 Try to fix an intermittent test failure 2018-10-17 15:49:26 -04:00
James Agnew 99cd4ce5f7 Allow for _total parameter 2018-10-17 09:47:35 -04:00
James Agnew 4b5dcce021 Add a bit of logging to subscription triggering 2018-10-17 08:32:57 -04:00
James Agnew 8130700d68 One more optimization to the subscription retriggering logic 2018-10-17 05:53:07 -04:00
James Agnew 2c05d9c5db Test cleanup 2018-10-16 21:51:33 -04:00
James Agnew 5d7142a972 Avoid intermittent test failures 2018-10-16 20:23:32 -04:00
James Agnew 755060f91e Allow subscription triggering on a block of resources 2018-10-16 15:29:41 -04:00
James Agnew b44e96a5cd Merge branch 'philips-3.6.0' 2018-10-15 08:37:00 -04:00
James Agnew b75226914d Fix intermittent test failure 2018-10-15 08:19:23 -04:00
James Agnew 6dc2dc1d6f One more test fix 2018-10-15 07:11:10 -04:00
James Agnew 796b12e33e Fix bug in $everything processing 2018-10-15 05:44:53 -04:00
James Agnew 8b46257423 Add warm cache module 2018-10-14 09:32:07 -04:00
James Agnew 51a69f0dc9 Fixes to migrator and count logic 2018-10-13 12:02:19 -04:00
James Agnew a9fcfaf79a Add a test 2018-10-10 19:11:57 -04:00