497 Commits

Author SHA1 Message Date
jamesagnew
df651c830e Remove dynamic mode 2018-08-19 17:35:08 -04:00
jamesagnew
3583dfd503 Correctly include project description in capabilitystatement 2018-06-03 16:19:33 -04:00
James Agnew
a3ff08d9ec
Replace phloc with ph for #775 (#930)
* Replace phloc with ph

* Enable schematron tests

* Make HAPI-FHIR ph-schematron on OSGI

* Work on getting tests passing

* Another test fix

* Fix up transaction handling for DSTU2

* Add changelog

* Avoid double transaction

* Dont use readonly

* One more test fix

* Update to snapshow build

* Resolve a circular dependency

* Try to fix tests

* Solve recurring NPE in DSTU2 tests

* Fix one more test

* Test fix

* More test threading fixes

* One more attempt to get tests passing

* Refactoring for tests

* Refactoring for tests
2018-05-14 17:38:40 -04:00
patrick-werner
ff04ab3358 ${argLine} -> [at]{argLine}
see:
http://maven.apache.org/surefire/maven-surefire-plugin/faq.html#late-property-evaluation
2018-03-19 10:45:33 +01:00
James Agnew
6afe6804db Fix #796 - Correctly escape spaces in generated URLs 2017-11-25 17:52:12 -05:00
James
49bdaa1a45 Version bump to 3.0.0 2017-09-23 17:31:39 -04:00
James
be5c5ebecd Merge in HAPI 3.0.0 working branch!
Squashed commit of the following:

commit 12f89a423a1691fdbc360706fd94a03bd9144d17
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:38:51 2017 -0400

    Minimize validation resources

commit f6868cce5c73b34d5ecd53bf1a220fdccd6b4e09
Merge: 3b80779fd3 1e158311d8
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:05:34 2017 -0400

    Forward port fix for #710

    Merge branch 'master' into hapi3_refactor

commit 3b80779fd3905cbf5322e6973334eb0ecb3d8426
Merge: 1f534985e8 356d9acaf7
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 12:31:09 2017 -0400

    Forward port #705, #708, and #710

    Merge branch 'master' into hapi3_refactor

commit 1f534985e8106347d9cc9da2dd8145fdd869547f
Merge: 7c39a47852 dedd3d635b
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 10:52:59 2017 -0400

    Forward port #695

    Merge branch 'master' into hapi3_refactor

commit 7c39a47852142bee398101120678217ab0917c7e
Merge: e0ffb84d21 6efafe62f1
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 09:53:17 2017 -0400

    Forward port #688

    Merge branch 'master' into hapi3_refactor

commit e0ffb84d2129c209ccffc2611038592f37dddfd2
Merge: 52388c11c1 d19b00ff09
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 14:59:46 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 52388c11c17cf038591244548f2a592f6b655cee
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 06:21:46 2017 -0400

    Cleanup

commit 209752cd638266b39574ae11c5989b624d5e85d3
Author: James <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:18:19 2017 -0400

    Fix tests

commit 4543408dc8d63b5b9682a275e261d3168cdc2196
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:55:50 2017 -0400

    Fix a potential deadlock

commit ee360f537692672df473f94dae75c176b2287415
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:22:06 2017 -0400

    Add R4 code to CLI

commit 1a95ba3b6529afdaf81232b82cc303718c0187d6
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 3 06:14:01 2017 -0400

    More cleanup

commit f0d88026817296edaa65132accd67d0c8ad8088c
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 11:27:43 2017 -0400

    Tests are working!

commit a4cbda357e8e7d024f24e3ee9a660b5366983ca1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:42:04 2017 -0400

    Connection handling cleanup for new tests

commit 0e2cecfbd0d7a546444a66e8411600040fd9a17b
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:16:28 2017 -0400

    Clean up R4 JPA tests

commit 40317a650d72c86e2529d5179cffe63399301de5
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 09:12:38 2017 -0400

    Work on R4 for JPA server

commit e7f8f8c30d72ed30d739979964db38d41c5baec1
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 20:43:47 2017 -0400

    More work on porting tests

commit 43c9003258696ab33e7bb335e882ab1c66fb61aa
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 07:09:29 2017 -0400

    Work on porting DSTU1 tests

commit 602857f1e26a69a2284e176b5e44a860d9b828ff
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 22:34:08 2017 -0400

    More work on bring unit tests up to date

commit e326a7b0cdb8368009119bba41886838a973e03e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:36:38 2017 -0400

    Credit for #686 and forward port the fix to R4 validator

commit 96543c3992adcb406df3c8899dab79cf4bd5b4b4
Merge: 3fb75aa61a 9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:12:33 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3fb75aa61ad29d9f3876a1c30c912627486147af
Author: James <jamesagnew@gmail.com>
Date:   Mon Jul 31 15:21:30 2017 -0400

    More work on cleanup

commit b02fbb6804127e77c61c4792eefd9fc0d23d63d0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 22:11:07 2017 -0400

    Work on porting STU1 tests

commit 1ae37b0db3929ea4f37955adf8f026e33ccf43b2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:56:10 2017 -0400

    Try to get coverage report working

commit 72b88849b30a94a9ff08d3a1ab50a05b2acbdfdd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:27:02 2017 -0400

    Fix android tests

commit e5f6c35aeab8bbc056870a038e1862181049a020
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 19:31:18 2017 -0400

    More work on getting legacy code cleaned up

commit 0b513b0845a082b5c20b0033dfab4e29f5e4a934
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 18:41:13 2017 -0400

    Continue work on removing deprecated API

commit defea69aa38a2e0f4137ed9c8527956872ff70bf
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 17:10:01 2017 -0400

    More cleanup of legacy code

commit 9ae7295705cb58f5edcf7ee1259f023cbbe2fe51
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 07:11:45 2017 -0400

    More cleanup of legacy code

commit ebd3eeb5ee793cf5805cc726db353f3def35ab00
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 06:43:25 2017 -0400

    More work on removing legacy code

commit 92224c2532faf70171473d64429c3ceaf3e3406c
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 18:44:06 2017 -0400

    Remove DSTU1 Bundle

commit c52cacf71bae3f5c02ffae03881c21de1f3aba22
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 14:27:42 2017 -0400

    Now compiling

commit b405e51773baf4ab3a3c387458cdc59541394cd1
Merge: c3ddf04e25 cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jul 28 06:21:02 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit c3ddf04e2598b8d6214975ab0ae795f850396811
Author: James <jamesagnew@gmail.com>
Date:   Thu Jul 27 11:06:06 2017 -0400

    Sync R4 releases in

commit b13333c3c03ddb9a5061c3b22bf011f4592104f8
Author: James <jamesagnew@gmail.com>
Date:   Fri Jul 14 05:52:33 2017 -0400

    JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.

commit 2e60ff7521b42890a32b97c2dda88ab233f5c91e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 20:02:46 2017 -0400

    Fix imports

commit a92ace2e0dac6e24f6dada53bf97d03861fd21a1
Merge: 3196db96d1 1a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 12:02:27 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3196db96d1c485310e746833df59c0e010b5b161
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 11:48:10 2017 -0400

    Don't add false paging link to request

commit bd4e1d338855a664045caa271d41616aed973a4d
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 21:32:16 2017 -0400

    Finally building correctly!

commit 6464ce9304703cb3c5ecc58491282ddacc900853
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 16:38:28 2017 -0400

    Work on refactor

commit 0059f2e48e9d7c812c1d42a57c5b6059814f5155
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 8 07:16:20 2017 -0400

    Keep working on refactor

commit 6c2e87e8cc19863a811c11623d1c878c8b48f031
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 22:35:13 2017 -0400

    Lots of work on refactor

commit 11cab975047a0c28190e6533074fd3f11ddde240
Merge: 34ec6b8807 6c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:57 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 34ec6b8807946aa6c97f0b5581dca9bd5f7b7a3e
Merge: f8e647511b c520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:49 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit f8e647511b4a82e7fde71a8850b8800e3d698b1f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 18:46:55 2017 -0400

    Work on hapi3 changes

commit c520e60ac1198f340cfb9090a7a33f91aa2d1e61
Author: James <jamesagnew@gmail.com>
Date:   Wed Jul 5 08:08:40 2017 -0400

    Keep working on refactor

commit f1d2ee90926f7db900a5b3b4ab9a8948d18e49f2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 22:10:59 2017 -0400

    Continue refactor for HAPI 3

commit 9281ccafc32354222932c5a9f5ee8b0f206ebc05
Merge: ea1264cd8e 294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 20:34:16 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit ea1264cd8e9b8c5297d218e91cf14bd48d0a92c7
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 10:26:01 2017 -0400

    Continue work on refactor

commit fbe2f98a0238f3d4e065db4550dd2ef1b460c0d8
Merge: b2bef47100 0a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 06:21:22 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit b2bef47100370e1248834523d73a630950032d7a
Author: James <jamesagnew@gmail.com>
Date:   Tue Jun 27 21:13:23 2017 -0400

    Work on refactor

commit 8f76e4e46385daa9ce3442e2d9342453ce373ba3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jun 25 21:55:35 2017 -0400

    Lots of work on refactoring
2017-08-13 14:39:47 -04:00
James Agnew
72be7ab795 Merge pull request #706 from InfiniteLoop90/master
Fixes #705 - Client correctly validates the server's conformance statement FHIR version
2017-08-13 11:03:52 -04:00
James Agnew
6efafe62f1 Merge pull request #688 from CarthageKing/bugfix-issue659
Correctly serialize baseurl/FooResource references
2017-08-12 14:51:46 -04:00
Clayton Bodendein
1743d108b6 Fixed #705 by making RestfulClientFactory check for the correct FHIR version strings when the client code tries to validate the server's conformance statement. Also fixed the corresponding unit tests. 2017-08-06 14:03:15 -05:00
James Agnew
09e23d857f Move tests to DSTU3 module 2017-07-26 16:59:35 -04:00
michael.i.calderero
9aaa49dd94 add test to show issue #659 2017-07-10 14:35:06 -05:00
James
14edc79ac1 Version bump to 2.6-SNAPSHOT 2017-06-09 07:28:29 -04:00
James
8b5209ff67 Version bump to 2.5 2017-06-08 06:34:44 -04:00
James
a834770e38 A bit more cleanup for #646 2017-05-22 08:13:00 -04:00
James
716fa56b8f Merge branch 'jpa_perf_enhancements' 2017-04-21 06:30:22 -04:00
James
cbc652d226 Version bump to 2.5-SNAPSHOT 2017-04-20 16:13:15 -04:00
James
9d3d15ce6f Version bump to 2.4 2017-04-19 21:38:36 -04:00
James
5adc09ad56 perf enhancements finally working 2017-04-17 16:56:53 -04:00
James Agnew
217d9f8176 More perf work 2017-04-16 14:46:15 -04:00
James
40848b1beb Version bump to 2.4-SNAPSHOT 2017-03-18 12:24:39 -04:00
James
e18ab206d7 Version bump to 2.3 2017-03-17 21:21:59 -04:00
James Agnew
45e4bd92ee Merge branch 'master' into jaxrs-sever-evolution 2017-03-16 22:04:55 -04:00
James Agnew
01d102accc Correct handling of contained resources in a response for annotation
client
2017-03-01 17:23:31 -05:00
Sebastien Riviere
c3447c3b4d Remove substitution string to use relative url, Fix client parser and custom extension. 2017-02-08 11:14:19 +01:00
James
7149d2e053 Merge branch 'custom_jpa_search_params' 2017-02-04 16:34:05 -05:00
James
dd0e47afc3 Make projects import cleanly into eclipse 2017-02-04 16:31:18 -05:00
James Agnew
3f8a8cd8aa Merge pull request #548 from sekaijin/cleanup
Cleanup
2017-02-04 16:02:50 -05:00
James
b4a362b8ee Work in progress 2017-02-01 05:55:35 -05:00
James Agnew
ea1ebb245e Merge pull request #547 from daliboz/master
Fix #546 CapturingInterceptor will now buffer response
2017-01-31 07:20:01 -05:00
James
11f1f4f6ee Deprecate getAllPopulatedChildElementsOfType 2017-01-31 06:53:04 -05:00
James
ce80007f8d Bump spring version and refactor examples 2017-01-29 22:55:22 -05:00
James Agnew
788792e004 Merge pull request #538 from CarthageKing/feature-parameterutil-fix
Ensure ParameterUtil.splitParameterString correctly parses consecutive unescaped delimiter
2017-01-29 17:53:39 -05:00
James
b66aa9761e Allow parsing of RSQuot 2017-01-29 15:49:10 -05:00
sekaijin
a150a96089 dependencies convergence
correct dependencies convergence
correct version use ${project.version}
2017-01-29 19:22:28 +01:00
sekaijin
23784c1619 remove .settings .project .classpath file of eclipse 2017-01-28 17:13:47 +01:00
Jenni Syed
c1e6f82385 Fix #546 CapturingInterceptor will now buffer response if the entity is not repeatable. 2017-01-27 17:45:53 -06:00
James
12598b4e3b Correctly handle declared extensions with multiple possible types
Squashed commit of the following:

commit d6ea0552b7f213e35897b110c688c4b849f572e1
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 09:04:58 2017 -0500

    FIx test

commit e5876f7d86a177ff7b0982187b3eeebdf52b225d
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 08:35:38 2017 -0500

    Work on extensison

commit 7e573c22990bbbae30bffaf05a2d4e718f32c8d2
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 07:27:25 2017 -0500

    Work on extensions

commit 234b4a0c1cc2dd00f928da93f74cbb65d6ccf628
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jan 26 06:25:47 2017 -0500

    More work on these extensison

commit 2eb780a690ef379bec35364a7e5383b545b437cd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Jan 25 22:35:57 2017 -0500

    Work on multitype extensions
2017-01-26 11:07:52 -05:00
James Agnew
344e324929 Fix #544
Squashed commit of the following:

commit 1ab9b58e9f3380cd6de3379b161e669f17cf4854
Author: James Agnew <jamesagnew@gmail.com>
Date:   Tue Jan 24 10:46:56 2017 -0500

    Changes working now

commit 5c752cdacee20711e7edef8aeb3217c94f72b9c5
Author: James <jamesagnew@gmail.com>
Date:   Tue Jan 24 08:43:04 2017 -0500

    Get JPA working with new uuid: logic

commit 127b76884a153684b2873af36683c721ac6784b1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jan 23 21:11:18 2017 -0500

    Fix test

commit 599bbe236c81fc050f421bced67578fdcafb9371
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jan 23 18:42:46 2017 -0500

    Work on #544
2017-01-24 10:47:24 -05:00
James Agnew
4e2e54a929 Merge pull request #540 from CarthageKing/feature-resource_not_supported-fix
return 404 instead of 400 when the FHIR resource/endpoint is not recognized/not supported
2017-01-20 18:49:49 -05:00
James
f59ac8cf83 Version bump license header 2017-01-18 22:18:37 -05:00
michael.i.calderero
b59c24ab7c return 404 instead of 400 when the FHIR resource/endpoint is not
recognized/not supported
2017-01-17 20:37:43 -06:00
michael.i.calderero
a6a1416888 Place empty values when splitting a parameter with a certain char and
here are at least two unescaped and consecutive variants of the given
char in the string.

This ensures that for example a QuantityParam with a param value of
"5.5||mg" the "mg" will not be treated as the 'system' but be treated
correctly as the 'unit' of the parameter object.
2017-01-12 14:21:30 -06:00
James
b448e13edd Version bump to 2.3 2016-12-20 19:01:31 -05:00
James
0ec61533a8 Publish 2.2 2016-12-20 19:00:37 -05:00
James
964919d880 Improve parsing 2016-12-19 14:03:11 -05:00
James
ab17ee68a3 Revert IFhirVersion method signature changes for #520 2016-12-11 18:55:59 -05:00
James
b0d656e5d9 Refactor fix for #520 a bit so that version in DSTU3 is always pulled
from the model
2016-12-10 14:40:27 -05:00
James
ee63bbea74 Fix #516 - Handle STU3 invalid enum values with an appropriate exception 2016-12-10 14:14:22 -05:00
James Agnew
81773de261 Fix #276 - Prevent contained resources being encoded as duplicates 2016-11-25 17:18:57 -05:00