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256 Commits

Author SHA1 Message Date
James Agnew 10d969c514
Add Consent Service (#1359) 
* Initial consent svc

* Ongoing consent svc work

* Add docs

* Ongoing consent service work

* Work on consent service

* More work on consent svc

* License header updates

* Ongoing consent svc work

* Some test fixes

* Some test fixes

* More work on consent svc

* Tests working

* Test fix

* Propagate RequestDetails to everything in JPA server

* More interceptor tweaks

* Fix compile error

* One more tweak to captured SQL

* Ongoing interceptor tweaks

* Ongoing interceptor tweaks

* More interceptor tweaks

* Interceptor tweaks

* Tweaks to tests

* Fix tests

* Test fix

* Raise warnings when encoding extensions with missing values

* Consent service work

* More interceptor tweaks

* Consent interceptor tweaks

* Add logging to test
 2019-06-27 16:35:29 -04:00
Stig Rohde Døssing b56f59542a Move JettyUtil to new module 2019-06-14 18:34:45 -04:00
Stig Rohde Døssing aab7bb6b64 Issue-1325: Let OS assign random ports to servers during testing, and let tests get the port of the running server once the OS has assigned a port. Delete PortUtil and similar utilities. 2019-06-14 18:34:45 -04:00
James Agnew 50a8c66bf5 Version bump to 4.0.0-SNAPSHOT 2019-05-30 17:13:03 -04:00
jamesagnew 73aa53be8f Release 3.8.0 2019-05-30 16:50:04 -04:00
James Agnew c2d4891434 Test fix 2019-05-29 21:13:52 -04:00
James Agnew 772d31dc6c
Merge pull request #1228 from eevaturkka/enablewhen_master 
QuestionnaireResponses should be able to have Items without Answers in disabled Questions
 2019-05-29 20:47:31 -04:00
Matti Uusitalo 225916a4b6 Changes requested in Pull Request review 2019-05-23 16:48:49 +03:00
James Agnew d4d3178621 A couple of test fixes 2019-05-11 15:04:44 -04:00
James Agnew 444730373b Fix an NPE in validation 2019-05-10 12:49:34 -04:00
James Agnew 92bd2c7173 Fix regression in validator when validating codesystems explicitly 
defined in the JPA database
 2019-05-10 12:08:40 -04:00
James Agnew 6b37525f2d
Clean up redundant dependencies (#1306) 
* Remove a bunch of unneedd deps

* Test fix

* Disable useless test
 2019-05-09 12:51:13 -04:00
James Agnew 61902da527 Tweak to validator 2019-05-06 10:18:55 -04:00
James Agnew 7753ba2e5c Several test fixes 2019-05-04 14:38:37 -04:00
James Agnew 5132f1f4ed COnfirm validation support comntains codesystem 2019-05-02 07:50:59 -04:00
James Agnew 37b9e1a42c Improve validation of enableWhen questionnaires 2019-04-29 14:43:42 -04:00
Matti Uusitalo b95b4cf110 Merge with master 2019-04-25 10:44:07 +03:00
James Agnew 738c2c1797
Interceptor framework refactoring (#1287) 
Interceptor framework overhaul
 2019-04-24 14:32:30 -04:00
James Agnew 210d99d121 Correct validation of questionnaire enableWhen 2019-04-17 16:50:37 -04:00
patrick-werner 41a032ae9f added more missing methods 2019-03-30 15:36:06 +01:00
patrick-werner 2f3ac9d734 added missing method 2019-03-30 15:21:01 +01:00
Matti Uusitalo 5e0996d8ff Better method comment 2019-03-05 12:00:56 +02:00
Matti Uusitalo 9549a1615c Merge with origin/master 2019-03-05 11:44:30 +02:00
James Agnew 48c10bddc5
Narrative Generator refactoring (#1219) 
* Starting work on this

* Working on narrative templates

* Work on new narrative system

* Account for some failing tests due to refactoring of narrative mode

* Another test fix

* More test fixes

* One more test fix

* Work on searches

* Address review comments
 2019-02-27 14:59:57 -05:00
James Agnew 0f8c8d18e2 Bump version to 3.8.0-SNAPSHOT 2019-02-06 20:02:28 -05:00
jamesagnew 207015c3af Version bump to 3.7.0 2019-02-05 21:36:38 -05:00
James Agnew 9a8e3245b8 Build fixes 2019-02-05 15:00:36 -05:00
James Agnew 47123196a0 Merge branch 'master' of https://github.com/eevaturkka/hapi-fhir into eevaturkka-master 2019-02-05 14:26:41 -05:00
Eeva Turkka be746854e5 version number for release 2019-01-31 15:42:37 +02:00
Eeva Turkka 1c9f7f7ca9 Version number changed for build 2019-01-31 13:26:13 +02:00
Eeva Turkka 7e7d4d8879 Allowing items without answers even if item is disabled. 2019-01-31 13:00:41 +02:00
Eeva Turkka e6df4a21e4 Merge branch 'enablewhen_fix' of https://github.com/eevaturkka/hapi-fhir into enablewhen_fix 2019-01-28 10:31:44 +02:00
James Agnew 4f16fea580 Fix compile error 2018-12-28 12:11:19 -05:00
James Agnew 14a132a937 Squashed commit of the following: 
commit 9659655830
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Dec 27 17:54:25 2018 -0500

    Finish sync

commit 70da25b76f
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Dec 27 10:32:51 2018 -0500

    Work on RI4 sync
 2018-12-27 17:58:47 -05:00
James Agnew a0cb7edd08 Version bump a few dependencies 2018-12-22 20:13:03 -05:00
Ken Stevens 84a34eb3c9
Subscription module support (#1147) 
* Reorganizing packages and dependencies to support standalone subscription running within a CDR container where all hapi modules are on the classpath.

Moved Subscription registry out of interceptor and introduced SubscriptionLoader

* Created ActiveSubscription and moved cache bits into it

* Moved ExecutorQueue stuff out into its own class

* Add test and supporting code to validate SubscriptionConstants.EXT_SUBSCRIPTION_RESTHOOK_DELIVER_LATEST_VERSION behaviour

* Added SubscriptionCheckingSubscriber

* Moved a few beans to @ComponentScan

* Replaced use of beanFactory with concrete factory classes

* Switched test to use subscribablechannel

* Added SubscriptionLoaderFhirClientTest

* Confirm that our SubscriptionProviderFhirClient works with a live fhir client

* Register interceptors with DaoConfig instead of RestServer.
Also, Rename @VisibleForTesting methods with ForUnitTest

* Fix triggering service so it uses new subscriptionmatcherinterceptor

* Renamed "Database" classes to "Dao"

* processing -> matching naming change
 2018-12-18 13:09:06 -05:00
Matti Uusitalo a3e7f5b18f Corrected group ids back to ca.uhn.hapi.fhir 2018-12-18 11:21:29 +02:00
Matti Uusitalo 01eb7faf66 Deleted unnecessary Inteface class 2018-12-18 10:15:47 +02:00
Matti Uusitalo 98f929997b Sync with upstream/master 2018-12-17 15:38:05 +02:00
Matti Uusitalo 7ad45308e0 Make this configurable 2018-12-17 14:10:15 +02:00
Matti Uusitalo 89e3cac0e2 Corrected problems caused by merge 2018-12-17 13:55:15 +02:00
Matti Uusitalo 8183c18406 Corrected project dependency version numberts 2018-12-17 13:54:43 +02:00
Matti Uusitalo 58959eec48 Do not force enableWhen to have system 2018-12-17 13:31:07 +02:00
Matti Uusitalo dd8e027ff4 Don't evaluate Extensions when determining type of answer 2018-12-17 13:31:07 +02:00
Matti Uusitalo a1f79a2063 Filter Extensions from enablewhen evaluation 2018-12-17 13:31:07 +02:00
Matti Uusitalo 755eaa5f25 bumped version n. for release 2018-12-17 13:31:07 +02:00
Matti Uusitalo c2b3d48afe Support required questionnaireitem groups 2018-12-17 13:31:07 +02:00
Matti Uusitalo a0db7e20b6 temporarily set hard coded error when no profile found 2018-12-17 13:30:36 +02:00
Matti Uusitalo cefacdc18c Returned to original state as the experiment failed 2018-12-17 13:30:36 +02:00
Matti Uusitalo 24ebe6cf03 Temporarily set isNoTerminologyServer() return true to avoid errors about loinc codes 2018-12-17 13:30:36 +02:00