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6179 Commits

Author SHA1 Message Date
Ken Stevens 6b019492fe
Merge pull request #1758 from jamesagnew/ks-20200312-json-annotation 
moved common Json annotations out into an interface
 2020-03-13 15:58:21 -04:00
Tadgh 74fd2c1519 wip 2020-03-13 11:28:44 -07:00
jamesagnew 72b9d9a350 FIx spelling mistake 2020-03-13 09:19:45 -04:00
James Agnew 1dc5d89013
Optmize forced ID resolution (#1754) 
* Add forced ID caching

* Work on id optimization

* Test fixes

* More optimization work

* Add some docs

* Work on docs

* Test fixes

* Test fixes

* Test fixes

* Address review comments

* Compile fix
 2020-03-12 17:12:50 -04:00
Tadgh fe51c08168
Merge pull request #1753 from dttvn0010/master 
Add VEIG(Vietnam Ehealth Innovation Group) to points.json
 2020-03-12 12:40:31 -07:00
Ken Stevens ecf5284c87 moved common Json annotations out into an interface 2020-03-12 13:36:34 -04:00
Tadgh c3ceffbd72 wip 2020-03-09 16:05:41 -07:00
Tadgh e38ec3e3dd Fix typo 2020-03-09 14:57:53 -07:00
Tadgh 12412a7be9 Add query capturing to query 2020-03-09 13:58:59 -07:00
Tadgh 59d1603597 Some variable renaming. Adds some questions. 2020-03-09 13:51:47 -07:00
James Agnew 9f725892d3
Drop anyresource classes (#1755) 
* Drop anyresource classes

* Drop invalid test
 2020-03-09 14:25:30 -04:00
James Agnew 34d42a17da Add tests 2020-03-09 12:41:46 -04:00
jamesagnew 202b9c9a51 License header 2020-03-08 07:23:57 -04:00
Tadgh aca4bcfaad Minor refactoring for readability 2020-03-06 14:22:31 -08:00
Tadgh b299d0b63f Fix Typos, reduce code duplication 
* Change Two streams into one.
* Fix typos.
* Begin Writing docstrings
* Rename variables for clarity
 2020-03-06 11:39:39 -08:00
tungdt 46c67d20cc Add VEIG(Vietnam Ehealth Innovation Group) to points.json 2020-03-06 17:43:56 +07:00
Tadgh 0acfc51082 Split test into two tests, one of which passes, one of which fails, showing the missing functionality 2020-03-05 16:38:42 -08:00
Ken Stevens 9b37ba35d0
Merge pull request #1747 from jamesagnew/ks-20200303-bulk-export-filter 
fixed a copy/paste error in bulk export with test
 2020-03-03 19:54:26 -05:00
Ken Stevens 2d9dea069d
Merge pull request #1748 from jamesagnew/ks-20200203-near-chain-r4 
fix near chain searching for R4
 2020-03-03 19:40:27 -05:00
Ken Stevens e819d40414 fix near searching for R4 2020-03-03 18:33:19 -05:00
Ken Stevens d104fbdf7d fixed a copy/paste error in bulk export with test 2020-03-03 16:40:31 -05:00
Ken Stevens b42502ae3c
Merge pull request #1744 from jamesagnew/ks-20200302-near-chain 
fix near-distance for chained searches in dstu3
 2020-03-03 14:48:54 -05:00
Ken Stevens ccd983ab42 review feedback: code improvement 2020-03-03 13:46:23 -05:00
Ken Stevens 705735b9c0 review feedback: javadoc 2020-03-03 13:29:10 -05:00
Ken Stevens 5b5ef08500 Merge remote-tracking branch 'remotes/origin/master' into ks-20200302-near-chain 2020-03-03 09:44:52 -05:00
James Agnew 58b5bd9664
Limit type on _has query (#1743) 
* Limit type on _has query

* Add changelog
 2020-03-03 08:28:38 -05:00
James Agnew 3c2c1dab2e
Error on missing profile validation (#1742) 
* Error on missing profile validation

* Add changelog

* Test fixes
 2020-03-03 08:28:26 -05:00
James Agnew ac9a371f18 Add test 2020-03-03 08:28:04 -05:00
jamesagnew 13fbdf418f Add ignored test for #1740 2020-03-03 05:22:16 -05:00
Tadgh 4d7f39cfdc
Merge pull request #1741 from jamesagnew/elastic-apm-integration-for-search 
Create custom span for Search Threads for Elastic APM
 2020-03-02 21:46:45 -08:00
Ken Stevens bce1716c6c documentation 2020-03-02 22:13:21 -05:00
Ken Stevens a56df03055 restrict near-distance extraction to DSTU3 2020-03-02 21:50:57 -05:00
Ken Stevens 4e1be80525 fixme 2020-03-02 21:39:28 -05:00
Ken Stevens d1b54a9668 pre-review cleanup 2020-03-02 21:32:27 -05:00
Ken Stevens 27dcafe4f2 all but unit tests 2020-03-02 21:27:50 -05:00
Ken Stevens 24acb57f3b began with failing test. 
test now passes.
 2020-03-02 17:56:25 -05:00
Tadgh 8d9119faef Rework span name 2020-03-02 14:37:09 -08:00
Ken Stevens b2f9dd4578
extend pointcutlatch and simplify FhirClientResourceRetriever (#1737) 
* extend pointcutlatch and simplify FhirClientResourceRetriever

* extend pointcutlatch and simplify FhirClientResourceRetriever
 2020-02-28 16:38:13 -05:00
Gary Graham ed7b9fc6b6 Initial attempt at integrating elastic APM for search performance 2020-02-28 16:09:16 -05:00
James Agnew 8c78e465b1
Defer large term delta adds (#1736) 
* Defer large term delta adds

* Add changelog
 2020-02-28 14:41:15 -05:00
James Agnew 5bc554949b
Remove deleted resources from cached search results (#1732) 
* Remove deleted resources from cached search results

* Add changelog

* Add tests
 2020-02-28 10:57:26 -05:00
James Agnew cb9906580e
Index canonical references (#1728) 
* Index canonical references

* Add changelog

* Fix compile error

* Add whitespace
 2020-02-25 21:45:46 -05:00
James Agnew b2b0ff22b4
Collapse date joins (#1726) 
* Collapse date joins

* Add changelog

* Address review comments

* Add whitespace

* fix test

Co-authored-by: Ken Stevens <ken.stevens@sympatico.ca>
 2020-02-25 17:17:13 -05:00
Ken Stevens f1646fd184
Merge pull request #1727 from jamesagnew/ks-20200220-subscription-fix 
Switching cdrsubscribablefactory from @ComponentScan to @Bean
 2020-02-25 14:37:57 -05:00
Ken Stevens 5656ca5b5b
Merge pull request #1729 from jamesagnew/ks-20200204-quiet-migrate-in-test 
Ks 20200204 quiet migrate in test
 2020-02-25 14:04:32 -05:00
Ken Stevens 38bae8866b quiet migration tasks during tests 
also add description to schema initialization tasks
 2020-02-25 09:43:34 -05:00
Ken Stevens 8d1d3cee75 Merge remote-tracking branch 'remotes/origin/master' into ks-20200204-quiet-migrate-in-test 2020-02-25 09:20:35 -05:00
Ken Stevens b33ad73d46 switch subscriptionchannelfactory to autowire 2020-02-24 14:28:14 -05:00
Ken Stevens 41b5eb2484 Switching cdrsubscribablefactory from @ComponentScan to @Bean 2020-02-23 15:43:30 -05:00
j-chan c0811376b7
Moved TranslateRawParameters method from BaseHapiFhirResourceDao to BaseStorageDao (#1722) 2020-02-20 10:52:43 -05:00