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264 Commits

Author SHA1 Message Date
James Agnew
3e296f9d1b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-11-25 17:53:01 -05:00
James Agnew
6afe6804db Fix #796 - Correctly escape spaces in generated URLs 2017-11-25 17:52:12 -05:00
jamesagnew
5b909b4746 Version bump to 3.2.0-SNAPSHOT 2017-11-24 13:32:47 -05:00
jamesagnew
42dd34252d Version bump to 3.1.0 2017-11-23 13:27:21 -05:00
James Agnew
ffc67248c4
Merge pull request #767 from InfiniteLoop90/issue-764-jax-rs-dstu2-hl7org 
Fixes #764 to allow the AbstractJaxRsConformanceProvider to support the DSTU2_HL7ORG, DSTU2_1, and R4 FhirContexts
 2017-11-22 19:54:45 -05:00
James Agnew
c5b7fea01d
Merge pull request #725 from InfiniteLoop90/issue-724-copy-domain-resource-id 
Fixes #724 - Resource IDs are now copied when copying instances of subclasses of DomainResource for DSTU2 and DSTU2.1.
 2017-10-31 17:41:33 -04:00
Clayton Bodendein
d7f13432df Related to issue #764, changed the private conformanceDate method in DSTU2_HL7ORG's ServerConformanceProvider to be consistent with the ServerConformanceProvider in other FHIR contexts 2017-10-30 12:48:23 -05:00
James Agnew
0875318842 Merge pull request #711 from InfiniteLoop90/master 
Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable
 2017-10-26 17:56:48 -04:00
James
15ba0dff03 Clean up email subscription type 2017-10-26 06:02:12 -04:00
Clayton Bodendein
452f6bc24c Related to issue #764 - adds support for the DSTU2_1 FHIR context in AbstractJaxRsConformanceProvider 2017-10-22 18:19:10 -05:00
Clayton Bodendein
a546c94ccb Fixes #764 to allow the AbstractJaxRsConformanceProvider to support the DSTU2_HL7ORG FhirContext 2017-10-21 23:00:19 -05:00
James
a782bd7630 Fix a number of problems reported by ErrorProne 2017-10-16 10:00:27 -04:00
James
31fb1236a1 Reuse bundle ID when returning query cache results 2017-10-11 06:05:14 -04:00
James Agnew
87383ad802 Version bump to 3.1.0-SNAPSHOT 2017-09-27 21:23:34 -04:00
James
49bdaa1a45 Version bump to 3.0.0 2017-09-23 17:31:39 -04:00
Clayton Bodendein
8f06cf7322 Related to issue #724 - Added more unit tests 2017-09-05 14:45:32 -05:00
Clayton Bodendein
5650238421 Related to issue #724 - Also ensures that the ID is copied for HL7 DSTU2 and DSTU2.1 subclasses of BackboneElement when the #copy() method is called. Also added unit tests for these and reverted the line endings of the HL7 DSTU2 and DSTU2.1 versions of the DomainResource class back to CRLF 2017-09-04 22:58:15 -05:00
Clayton Bodendein
8fb528c1c9 Related to issue #724 - forgot a right curly brace in Javadoc comment 2017-09-04 10:48:37 -05:00
Clayton Bodendein
7b46bca1bf Also fixes #724 - Added unit tests to ensure that the IDs of instances of DomainResource subclasses get copied as expected 2017-09-04 10:46:09 -05:00
Clayton Bodendein
d575fb8ee7 Fixes #724 - Resource IDs are now copied when copying instances of subclasses of DomainResource for DSTU2 and DSTU2.1. (STU3 and R4 already had this fix) 2017-09-03 16:54:55 -05:00
Clayton Bodendein
9a6f4f89a3 Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable 2017-08-13 17:33:47 -05:00
James
be5c5ebecd Merge in HAPI 3.0.0 working branch! 
Squashed commit of the following:

commit 12f89a423a1691fdbc360706fd94a03bd9144d17
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:38:51 2017 -0400

    Minimize validation resources

commit f6868cce5c73b34d5ecd53bf1a220fdccd6b4e09
Merge: 3b80779fd3 1e158311d8
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:05:34 2017 -0400

    Forward port fix for #710

    Merge branch 'master' into hapi3_refactor

commit 3b80779fd3905cbf5322e6973334eb0ecb3d8426
Merge: 1f534985e8 356d9acaf7
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 12:31:09 2017 -0400

    Forward port #705, #708, and #710

    Merge branch 'master' into hapi3_refactor

commit 1f534985e8106347d9cc9da2dd8145fdd869547f
Merge: 7c39a47852 dedd3d635b
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 10:52:59 2017 -0400

    Forward port #695

    Merge branch 'master' into hapi3_refactor

commit 7c39a47852142bee398101120678217ab0917c7e
Merge: e0ffb84d21 6efafe62f1
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 09:53:17 2017 -0400

    Forward port #688

    Merge branch 'master' into hapi3_refactor

commit e0ffb84d2129c209ccffc2611038592f37dddfd2
Merge: 52388c11c1 d19b00ff09
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 14:59:46 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 52388c11c17cf038591244548f2a592f6b655cee
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 06:21:46 2017 -0400

    Cleanup

commit 209752cd638266b39574ae11c5989b624d5e85d3
Author: James <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:18:19 2017 -0400

    Fix tests

commit 4543408dc8d63b5b9682a275e261d3168cdc2196
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:55:50 2017 -0400

    Fix a potential deadlock

commit ee360f537692672df473f94dae75c176b2287415
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:22:06 2017 -0400

    Add R4 code to CLI

commit 1a95ba3b6529afdaf81232b82cc303718c0187d6
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 3 06:14:01 2017 -0400

    More cleanup

commit f0d88026817296edaa65132accd67d0c8ad8088c
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 11:27:43 2017 -0400

    Tests are working!

commit a4cbda357e8e7d024f24e3ee9a660b5366983ca1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:42:04 2017 -0400

    Connection handling cleanup for new tests

commit 0e2cecfbd0d7a546444a66e8411600040fd9a17b
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:16:28 2017 -0400

    Clean up R4 JPA tests

commit 40317a650d72c86e2529d5179cffe63399301de5
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 09:12:38 2017 -0400

    Work on R4 for JPA server

commit e7f8f8c30d72ed30d739979964db38d41c5baec1
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 20:43:47 2017 -0400

    More work on porting tests

commit 43c9003258696ab33e7bb335e882ab1c66fb61aa
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 07:09:29 2017 -0400

    Work on porting DSTU1 tests

commit 602857f1e26a69a2284e176b5e44a860d9b828ff
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 22:34:08 2017 -0400

    More work on bring unit tests up to date

commit e326a7b0cdb8368009119bba41886838a973e03e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:36:38 2017 -0400

    Credit for #686 and forward port the fix to R4 validator

commit 96543c3992adcb406df3c8899dab79cf4bd5b4b4
Merge: 3fb75aa61a 9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:12:33 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3fb75aa61ad29d9f3876a1c30c912627486147af
Author: James <jamesagnew@gmail.com>
Date:   Mon Jul 31 15:21:30 2017 -0400

    More work on cleanup

commit b02fbb6804127e77c61c4792eefd9fc0d23d63d0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 22:11:07 2017 -0400

    Work on porting STU1 tests

commit 1ae37b0db3929ea4f37955adf8f026e33ccf43b2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:56:10 2017 -0400

    Try to get coverage report working

commit 72b88849b30a94a9ff08d3a1ab50a05b2acbdfdd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:27:02 2017 -0400

    Fix android tests

commit e5f6c35aeab8bbc056870a038e1862181049a020
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 19:31:18 2017 -0400

    More work on getting legacy code cleaned up

commit 0b513b0845a082b5c20b0033dfab4e29f5e4a934
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 18:41:13 2017 -0400

    Continue work on removing deprecated API

commit defea69aa38a2e0f4137ed9c8527956872ff70bf
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 17:10:01 2017 -0400

    More cleanup of legacy code

commit 9ae7295705cb58f5edcf7ee1259f023cbbe2fe51
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 07:11:45 2017 -0400

    More cleanup of legacy code

commit ebd3eeb5ee793cf5805cc726db353f3def35ab00
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 06:43:25 2017 -0400

    More work on removing legacy code

commit 92224c2532faf70171473d64429c3ceaf3e3406c
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 18:44:06 2017 -0400

    Remove DSTU1 Bundle

commit c52cacf71bae3f5c02ffae03881c21de1f3aba22
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 14:27:42 2017 -0400

    Now compiling

commit b405e51773baf4ab3a3c387458cdc59541394cd1
Merge: c3ddf04e25 cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jul 28 06:21:02 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit c3ddf04e2598b8d6214975ab0ae795f850396811
Author: James <jamesagnew@gmail.com>
Date:   Thu Jul 27 11:06:06 2017 -0400

    Sync R4 releases in

commit b13333c3c03ddb9a5061c3b22bf011f4592104f8
Author: James <jamesagnew@gmail.com>
Date:   Fri Jul 14 05:52:33 2017 -0400

    JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.

commit 2e60ff7521b42890a32b97c2dda88ab233f5c91e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 20:02:46 2017 -0400

    Fix imports

commit a92ace2e0dac6e24f6dada53bf97d03861fd21a1
Merge: 3196db96d1 1a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 12:02:27 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3196db96d1c485310e746833df59c0e010b5b161
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 11:48:10 2017 -0400

    Don't add false paging link to request

commit bd4e1d338855a664045caa271d41616aed973a4d
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 21:32:16 2017 -0400

    Finally building correctly!

commit 6464ce9304703cb3c5ecc58491282ddacc900853
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 16:38:28 2017 -0400

    Work on refactor

commit 0059f2e48e9d7c812c1d42a57c5b6059814f5155
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 8 07:16:20 2017 -0400

    Keep working on refactor

commit 6c2e87e8cc19863a811c11623d1c878c8b48f031
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 22:35:13 2017 -0400

    Lots of work on refactor

commit 11cab975047a0c28190e6533074fd3f11ddde240
Merge: 34ec6b8807 6c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:57 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 34ec6b8807946aa6c97f0b5581dca9bd5f7b7a3e
Merge: f8e647511b c520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:49 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit f8e647511b4a82e7fde71a8850b8800e3d698b1f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 18:46:55 2017 -0400

    Work on hapi3 changes

commit c520e60ac1198f340cfb9090a7a33f91aa2d1e61
Author: James <jamesagnew@gmail.com>
Date:   Wed Jul 5 08:08:40 2017 -0400

    Keep working on refactor

commit f1d2ee90926f7db900a5b3b4ab9a8948d18e49f2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 22:10:59 2017 -0400

    Continue refactor for HAPI 3

commit 9281ccafc32354222932c5a9f5ee8b0f206ebc05
Merge: ea1264cd8e 294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 20:34:16 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit ea1264cd8e9b8c5297d218e91cf14bd48d0a92c7
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 10:26:01 2017 -0400

    Continue work on refactor

commit fbe2f98a0238f3d4e065db4550dd2ef1b460c0d8
Merge: b2bef47100 0a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 06:21:22 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit b2bef47100370e1248834523d73a630950032d7a
Author: James <jamesagnew@gmail.com>
Date:   Tue Jun 27 21:13:23 2017 -0400

    Work on refactor

commit 8f76e4e46385daa9ce3442e2d9342453ce373ba3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jun 25 21:55:35 2017 -0400

    Lots of work on refactoring
 2017-08-13 14:39:47 -04:00
James Agnew
72be7ab795 Merge pull request #706 from InfiniteLoop90/master 
Fixes #705 - Client correctly validates the server's conformance statement FHIR version
 2017-08-13 11:03:52 -04:00
Clayton Bodendein
1743d108b6 Fixed #705 by making RestfulClientFactory check for the correct FHIR version strings when the client code tries to validate the server's conformance statement. Also fixed the corresponding unit tests. 2017-08-06 14:03:15 -05:00
michael.i.calderero
11aa1c5a9e fix for #659 2017-07-10 18:10:31 -05:00
michael.i.calderero
9aaa49dd94 add test to show issue #659 2017-07-10 14:35:06 -05:00
christian ohr
872d72629c #604:allow MINUTE precision for datetimes 2017-06-09 15:21:53 -04:00
James
14edc79ac1 Version bump to 2.6-SNAPSHOT 2017-06-09 07:28:29 -04:00
James
8b5209ff67 Version bump to 2.5 2017-06-08 06:34:44 -04:00
James Agnew
c04146a76a Revert "Allow MINUTE precision for datetimes. Closes #604" 2017-06-07 21:42:52 -04:00
James Agnew
1b557b05f0 Merge pull request #655 from ohr/master 
Allow MINUTE precision for datetimes. Closes #604
 2017-06-07 21:30:33 -04:00
James Agnew
7c6bb01a8b Don't allow JPA server to save duplicate or empty tags, and fix #664 by 
preventing multiple threads from loading structure definitions for
validation at the same time
 2017-06-06 16:44:13 -04:00
christian ohr
aafde2eceb #604:allow MINUTE precision for datetimes 2017-05-26 15:27:58 +02:00
James
716fa56b8f Merge branch 'jpa_perf_enhancements' 2017-04-21 06:30:22 -04:00
James
cbc652d226 Version bump to 2.5-SNAPSHOT 2017-04-20 16:13:15 -04:00
James
9d3d15ce6f Version bump to 2.4 2017-04-19 21:38:36 -04:00
James
077676fd03 Bring DSTU3 structs up to FHIR R3 
Squashed commit of the following:

commit 65b70d30c90f82a228fdfb3c82a6215d076326d5
Author: James <jamesagnew@gmail.com>
Date:   Tue Apr 18 07:44:08 2017 -0400

    More work on bringing structs up to date

commit 1df2de066761dbedd23918927f68e9cf9fe85bcd
Author: James <jamesagnew@gmail.com>
Date:   Tue Apr 18 07:12:45 2017 -0400

    Working

commit 9a51323e03ffe1abe84465481f4a2e0caa5f0524
Author: James <jamesagnew@gmail.com>
Date:   Mon Apr 17 22:18:24 2017 -0400

    Updates to STU3

commit 40aebba0a7e03a65360189e9c3de009b13374a65
Author: James <jamesagnew@gmail.com>
Date:   Mon Apr 17 18:30:26 2017 -0400

    Fix regression caused by #610
 2017-04-18 07:48:38 -04:00
James
1039bbec97 More perf work 2017-04-14 07:25:01 -04:00
michael.i.calderero
125f9b4fed JsonParser tests for OverrideResourceIdWithBundleEntryFullUrl 2017-04-13 13:37:02 -05:00
michael.i.calderero
b890bf3c75 XmlParser tests for OverrideResourceIdWithBundleEntryFullUrl 2017-04-13 12:09:31 -05:00
James
40848b1beb Version bump to 2.4-SNAPSHOT 2017-03-18 12:24:39 -04:00
James
e18ab206d7 Version bump to 2.3 2017-03-17 21:21:59 -04:00
James
8758b6f3da Updating to 1.9.0 structures 
Squashed commit of the following:

commit 81edf46fe02a88851693f958e60855edfe69c04c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Mar 17 21:05:22 2017 -0400

    Work on converter

commit 3342d987008892dd3a75dddd251fe599c31c5a6c
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 08:40:37 2017 -0400

    Site updates

commit 7dcb63904ece1fcb59a09dc268e8382ac0b75535
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 08:36:39 2017 -0400

    STU3 structs working!

commit c5aec809e3f19f3fedf0aaaeab8cdd7924c144a2
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 07:05:54 2017 -0400

    Format test

commit 5033090010e8c93644505bccaa5e41ccbd756485
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 07:03:39 2017 -0400

    Merge tests for STU3

commit de40a516bfa4d2ab7f5e28e2d95815fde68bd10a
Merge: d5a5a60 899ed25
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 06:59:20 2017 -0400

    Merge branch 'master' into dstu3_latest_structs

commit d5a5a601b53d8be6712f0bfe37ba7e6eb4d3ce58
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 14 12:04:37 2017 -0400

    Latest fixes

commit ae46ad53d2075e66e3c58c1e626652b4e144f20c
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 14 06:51:59 2017 -0400

    STU3 structs passing

commit ec3b62d31131d303001f8574c58fb7a8b8194f68
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 22:20:05 2017 -0400

    Fix some tests

commit 933f9b08c32dd8671638f406a0966c5ee07d86a1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 21:18:03 2017 -0400

    Fix test

commit 2a3ad0b422f58cfffea966a7005c6a3d86d189da
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 21:07:33 2017 -0400

    Resolve compile issues in STU3

commit fe04eba312a42c74b10a3971e4d61d58ba003bf9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:51:35 2017 -0400

    FIx compilation error

commit 6c63a558c97cf176105967a84a0b32472c6c0fcb
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:48:13 2017 -0400

    Another STU3 struct fix

commit 6acd25458aad89aaff94768c824d4d1fcdac97ba
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:41:16 2017 -0400

    Work on STU3 structs

commit 90a476dba2665a129572ad5cbbd8dd29afd9d4c8
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:28:32 2017 -0400

    Resolve JDK8 dependencies

commit 783bc1519971e977fe7139aa1d3a2e7f37940a63
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:20:57 2017 -0400

    Fix some tests

commit 60c379175b689495e65278bb6a237af3de379aa8
Author: James <jamesagnew@gmail.com>
Date:   Sun Mar 12 19:56:29 2017 -0400

    Work on STU3 structs

commit e98c2eed6601f7009e199aca3b82399a3377077c
Author: James <jamesagnew@gmail.com>
Date:   Sun Mar 12 19:41:48 2017 -0400

    Work on DSTU3 structures

commit 3ce909212bf0f11561b8342d406cffcf957afeb3
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 7 21:03:14 2017 -0500

    Work up upgrading structs
 2017-03-17 21:06:12 -04:00
James Agnew
45e4bd92ee Merge branch 'master' into jaxrs-sever-evolution 2017-03-16 22:04:55 -04:00
James Agnew
5811702a92 Merge branch 'master' into master 2017-02-17 17:39:55 -05:00
James Agnew
82ac69d86c Throw correct HTTP status when validation fails because of missing ID 2017-02-11 19:22:25 -05:00
James
12e047b931 Fix a couple of compile issues 2017-02-09 06:53:22 -05:00
sekaijin
7adb35d003 resolve some warnings 
unused
then clause does not complete normally
serial
missing @Override
remove unnecessary cast
 2017-02-08 16:41:03 +01:00
Sebastien Riviere
3bf6555d61 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution 2017-02-06 11:34:31 +01:00
sekaijin
a150a96089 dependencies convergence 
correct dependencies convergence
correct version use ${project.version}
 2017-01-29 19:22:28 +01:00