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546 Commits

Author SHA1 Message Date
James Agnew 53b47ed580 Ensure that parsed reesource is available to interceptors 2019-06-27 18:23:10 -04:00
James Agnew 10d969c514
Add Consent Service (#1359) 
* Initial consent svc

* Ongoing consent svc work

* Add docs

* Ongoing consent service work

* Work on consent service

* More work on consent svc

* License header updates

* Ongoing consent svc work

* Some test fixes

* Some test fixes

* More work on consent svc

* Tests working

* Test fix

* Propagate RequestDetails to everything in JPA server

* More interceptor tweaks

* Fix compile error

* One more tweak to captured SQL

* Ongoing interceptor tweaks

* Ongoing interceptor tweaks

* More interceptor tweaks

* Interceptor tweaks

* Tweaks to tests

* Fix tests

* Test fix

* Raise warnings when encoding extensions with missing values

* Consent service work

* More interceptor tweaks

* Consent interceptor tweaks

* Add logging to test
 2019-06-27 16:35:29 -04:00
jamesagnew 8bb010bb18 Test fixes 2019-06-22 17:42:02 -04:00
jamesagnew 0fbde2a4e5 Fix #1352 - Don't fail to create observation with a value type of 
SampledData
 2019-06-22 16:43:25 -04:00
jamesagnew 3274693576 FIx a test 2019-06-22 16:31:55 -04:00
jamesagnew 95876ec3cb Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-06-22 16:24:07 -04:00
jamesagnew 638cb976fd Fix #1250 - Don't include Bundle.entry.response on search results 2019-06-22 16:23:32 -04:00
James Agnew 4ad1808da3
Propagate RequestDetails to everything in JPA server (#1358) 2019-06-22 15:18:06 -05:00
jamesagnew c7798fee48 Test fix 2019-06-18 05:40:00 -04:00
James Agnew b2e99cf035
Add support for conditional patch (#1348) 
* Add support for conditional patch

* Add changelog

* Test fix
 2019-06-17 16:12:05 -04:00
Stig Rohde Døssing b56f59542a Move JettyUtil to new module 2019-06-14 18:34:45 -04:00
Stig Rohde Døssing aab7bb6b64 Issue-1325: Let OS assign random ports to servers during testing, and let tests get the port of the running server once the OS has assigned a port. Delete PortUtil and similar utilities. 2019-06-14 18:34:45 -04:00
James Agnew 50a8c66bf5 Version bump to 4.0.0-SNAPSHOT 2019-05-30 17:13:03 -04:00
jamesagnew 73aa53be8f Release 3.8.0 2019-05-30 16:50:04 -04:00
basecade 3bb3c3a383 Preserve contained resource meta when encoding to dao (#1311) 
* Preserve contained resource meta when encoding with: parser.setDontEncodeElements(ResourceMetaParams.EXCLUDE_ELEMENTS_IN_ENCODED)

* - Correct so security, lastUpdated and versionId is not encoded
- Added test
 2019-05-22 17:11:03 -04:00
James Agnew d4d3178621 A couple of test fixes 2019-05-11 15:04:44 -04:00
James Agnew 6b37525f2d
Clean up redundant dependencies (#1306) 
* Remove a bunch of unneedd deps

* Test fix

* Disable useless test
 2019-05-09 12:51:13 -04:00
James Agnew 738c2c1797
Interceptor framework refactoring (#1287) 
Interceptor framework overhaul
 2019-04-24 14:32:30 -04:00
James Agnew 311246e5f0
Merge pull request #1255 from jamesagnew/addFetchValueSet 
added fetchValueSet to IValidationSupport and made it public
 2019-04-15 17:03:56 -04:00
James Agnew c8f2e4bbc9 Return HTTP 400 for missing body on POST and PUT 2019-04-14 12:32:09 -04:00
patrick-werner 15fda25771 added fetchValueSet to IValidationSupport and made it public to enable overwriting it in subclasses 2019-03-27 17:35:01 +01:00
James Agnew e85bec2858
Ja inline references (#1252) 
* Use a single IN clause for OR reference searches

* Add changelog

* One more attempt at getting the free port util to actually work... sigh

* One more tweak to free ports

* Bundle fix
 2019-03-26 10:42:42 +01:00
James Agnew e3ecf21fa9 One more test fix 2019-03-12 13:24:18 -04:00
James Agnew 00a8f8c759 Fix broken build 2019-03-12 13:13:13 -04:00
James Agnew 3433ecfd14 Test fixes 2019-03-11 16:14:34 -04:00
James Agnew 71a07c0239 Refactor the way that contexts are used in narrative generator 2019-03-11 16:05:25 -04:00
Ken Stevens dcfacfea49
Has param no in (#1232) 2019-03-10 20:50:24 -04:00
James Agnew f8b8f2d1b0 Move process-message to the correct level 2019-03-06 16:12:43 -05:00
James Agnew 48c10bddc5
Narrative Generator refactoring (#1219) 
* Starting work on this

* Working on narrative templates

* Work on new narrative system

* Account for some failing tests due to refactoring of narrative mode

* Another test fix

* More test fixes

* One more test fix

* Work on searches

* Address review comments
 2019-02-27 14:59:57 -05:00
James Agnew 0f8c8d18e2 Bump version to 3.8.0-SNAPSHOT 2019-02-06 20:02:28 -05:00
jamesagnew 207015c3af Version bump to 3.7.0 2019-02-05 21:36:38 -05:00
James Agnew e401ec86e4
Enhanced elements (#1192) 
Squashed merge: Add elements exclude mode

* Start working on elements enhancement

* Work on elements projection

* Work on elements filter

* Feature is now working

* Just some cleanup

* Address compile issues
 2019-02-03 16:41:33 -05:00
bdenton 737ee9e97c add JSON-like tests for DSTU3 and R4 2019-01-30 17:32:06 -08:00
James Agnew 68fae08f20 Fix casing in base64Binary type 2019-01-23 08:34:09 -05:00
James Agnew b8755615b2 Allow AuthorizationInterceptor to read patients if the user has read 
access to the individual instance
 2019-01-14 13:53:08 -06:00
James Agnew 93bf2788ec Add subscription narrowing interceptor and refactor RuleBuilder to be a 
bit cleaner
 2019-01-12 14:23:26 -06:00
James Agnew 3c260e5ef2 Ignore unfinished test 2019-01-10 07:36:37 -07:00
James Agnew b8f200f897 Correctly expose chains in DSTU2 server conformance statmeent 2019-01-10 06:15:31 -07:00
Stig Rohde Døssing f8b232bb67 Issue 430: Generate OperationDefinitions for named queries, fix minor errors in generation of OperationDefinition for operations. Closes #430. 2019-01-09 05:41:08 -05:00
James Agnew 62ae71c1c6 Allow authorizing delete operations via a transaction in 
AuthorizationInterceptor
 2019-01-07 15:43:36 -05:00
jamesagnew a8a97ae6b2 Two test fixes 2019-01-07 09:18:11 -05:00
James Agnew bb6e392e2d Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-01-07 09:17:37 -05:00
James Agnew c104923855 Add an additional test for transaction processing 2019-01-07 09:17:19 -05:00
jamesagnew 3d94761bcb Improve response for transactions 2019-01-06 18:08:32 -05:00
jamesagnew b2c7a2003e Prevent a nullpointerexception in AuthorizationInterceptor 2019-01-06 16:42:29 -05:00
James Agnew 14a132a937 Squashed commit of the following: 
commit 9659655830
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Dec 27 17:54:25 2018 -0500

    Finish sync

commit 70da25b76f
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Dec 27 10:32:51 2018 -0500

    Work on RI4 sync
 2018-12-27 17:58:47 -05:00
James Agnew a0cb7edd08 Version bump a few dependencies 2018-12-22 20:13:03 -05:00
Corina Dalaban d46878be86 unit tests for head operation 
-reverting the removal of the unit test but with the correct status code
-added unit test for a valid patient
 2018-12-21 05:40:35 -05:00
Corina Dalaban 65a54bfe29 the test for head operation is not needed anymore in the 
unsupportedhttpmethods
 2018-12-21 05:40:35 -05:00
James Agnew b442982310 Add media interceptor 2018-12-08 18:49:58 -05:00