James Agnew
77d15a1836
Fix failing tests due to race conditions
...
* Work on failing tests
* Temporary downgrade of fhir core
* Work on failing build
* Fix pom
* Don't upload codecov
* Restore codecov
* Restore all tests
* Keep hammering away at intermittent test failures
* More test fixes
* Keep chipping away at these...
* Add some extra checks
* Work on tests
* More test logging
* More logging
* This might be it!
* Final build fixes?
* Address some review comments
* A couple more corrections
2019-09-26 16:11:15 -04:00
James Agnew
ddb5605830
Improve test logging
2019-09-25 22:17:47 -04:00
James Agnew
99787d14f1
Add some test logging
2019-09-25 21:20:36 -04:00
James Agnew
8657afb01e
Fix intermittent test failures regarding search ( #1509 )
...
* Add some logging
* Add more test logging
* Work on some test logging
* Fix compile error
* Work on codecov
* Work on codecov
* Remove test debug messages
2019-09-25 20:15:21 -04:00
James Agnew
4570e50c03
Fix nullability on one column
2019-09-25 15:31:26 -04:00
James Agnew
cddaf058a2
Add some extra test logging
2019-09-25 15:27:17 -04:00
jamesagnew
b2c13f3018
Work on codecov integration
2019-09-25 13:25:59 -04:00
jamesagnew
2efef13528
Another test fix
2019-09-25 05:43:58 -04:00
jamesagnew
4c064186a9
Try to fix intermittent testfailure
2019-09-25 05:39:00 -04:00
James Agnew
bd763d728b
Merge branch 'master' into ks-source-request-id-append-bug
2019-09-24 14:49:39 -04:00
James Agnew
5f563057c0
Set up CI with Azure Pipelines ( #1502 )
...
* Set up CI with Azure Pipelines
[skip ci]
* Update azure-pipelines.yml for Azure Pipelines
* Skip tests for a build
* Work on pipeline
* Update azure-pipelines.yml for Azure Pipelines
* Interceptors docs
* Test fix
* Disable releases from snapshot repo
* Try disabling jitpack
* Fix dependency issue
* A couple of test fixes
* Change to trigger a build
* Force a change to trigger a build
* Force a build
* FIx test
2019-09-24 14:38:38 -04:00
Ken Stevens
0e90867a65
fixed meta.source request append bug
2019-09-24 14:35:34 -04:00
James Agnew
9b2826f3c6
Handle searches with chained slash value ( #1503 )
...
* Work on test case for bug with searches
* Work on tests
* Fix issue with slashes in reference chain parameter for JPA server
2019-09-24 14:31:05 -04:00
Diederik Muylwyk
2a2e8e0ab8
Merge pull request #1501 from jamesagnew/1483-need-consistent-assignment-of-fullurl-id-and-url-for-loinc
...
Fixed inconsistent IDs and URLs for LOINC.
2019-09-23 15:59:21 -04:00
James Agnew
6f44d7c360
Fix issue deleting CodeSystem resources ( #1316 )
...
* Fix deleting CodeSystem resources
* Test fixes
* Address review comments
2019-09-23 15:58:57 -04:00
James Agnew
004f42cdcc
Clean up docs
2019-09-23 15:56:02 -04:00
Diederik Muylwyk
59d7ccb99e
Fixed inconsistent IDs and URLs for LOING.
2019-09-23 15:49:58 -04:00
Diederik Muylwyk
56e2904029
Removing my name. Whoops!
2019-09-20 18:48:47 -04:00
Diederik Muylwyk
0cc35699b8
Specify full path for LOINC filenames to avoid duplicates.
2019-09-20 18:43:38 -04:00
Diederik Muylwyk
e1e8ec981b
Replaced migration task column length constants with literals because they are not necessarily constant across schema versions.
2019-09-20 12:31:54 -04:00
jamesagnew
6475146bc9
Add license headers
2019-09-19 18:08:21 -04:00
James Agnew
eddb98084d
Move PreferReturnEnum back to original location to avoid regressions
2019-09-19 15:48:58 -04:00
James Agnew
6fde2879ef
Fix one more intermittent test
2019-09-19 14:53:29 -04:00
James Agnew
47805bceff
Test fixes
2019-09-19 14:42:27 -04:00
James Agnew
a5a0fca065
Test fixes
2019-09-19 11:33:33 -04:00
James Agnew
2be63a1650
Test fixes
2019-09-19 09:45:07 -04:00
jamesagnew
170698562a
Bump to current org.hl7.fhir.core
2019-09-19 08:11:30 -04:00
James Agnew
30dfde645b
Upgrade to Fontawesdome 5 and prevent uploading resources with binary
...
storage extensions
2019-09-19 05:28:05 -04:00
James Agnew
6b21e8cd90
Add some testing to the bulk export service
2019-09-18 14:43:00 -04:00
James Agnew
4a751cbfc5
Integrate Bulk Export ( #1487 )
...
* Start working on subscription processor
* Work on new scheduler
* Test fixes
* Scheduler refactoring
* Fix test failure
* One more test fix
* Updates to scheduler
* More scheduler work
* Tests now all passing
* Ongoing work on export
* Ongoing scheduler work
* Ongoing testing
* Work on export task
* Sync master
* Ongoing work
* Bump xml patch version
* Work on provider
* Work on bulk
* Work on export scheduler
* More test fies
* More test fixes
* Compile fix
* Reduce logging
* Improve logging
* Reuse bulk export jobs
* Export provider
* Improve logging in bulk export
* Work on bulk export service
* One more bugfix
* Ongoing work on Bulk Data
* Add changelog
2019-09-17 16:01:35 -04:00
James Agnew
882e0853df
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-09-16 15:55:49 -04:00
James Agnew
38cf830384
Accurately reflect codesystem URL
2019-09-16 15:55:32 -04:00
Diederik Muylwyk
3a9342913c
Address review comments. Added tests.
2019-09-16 11:54:34 -04:00
Diederik Muylwyk
b05c5f3f71
Implement the parent and child filters for LOINC. #1453
2019-09-15 21:52:33 -04:00
Diederik Muylwyk
9b1af6b207
Implement both a copyright property and a copyright filter for LOINC. #1451
2019-09-13 16:18:51 -04:00
Diederik Muylwyk
678d58ab90
Only manually add EXTERNAL_COPYRIGHT_NOTICE to LOINC uploader if it doesn't already exist in loinc.xml
2019-09-13 11:57:19 -04:00
Diederik Muylwyk
75ddba7f2d
Add EXTERNAL_COPYRIGHT_NOTICE property for LOINC uploader.
2019-09-13 11:49:01 -04:00
Diederik Muylwyk
7dce29b86e
Merge pull request #1468 from jamesagnew/dm-more-performance-tuning-on-valueset-expansion
...
More performance tuning on ValueSet expansion.
2019-09-10 17:57:13 -04:00
Diederik Muylwyk
65e029458c
Test fixes.
2019-09-10 17:50:49 -04:00
Diederik Muylwyk
d4feb5d0b1
Final cleanup before review.
2019-09-10 14:21:42 -04:00
James Agnew
9420bca341
Merge branch 'master' into ks-in-memory-date-compare
2019-09-10 13:25:29 -04:00
Diederik Muylwyk
57d4cc23ee
More bug-hunting. DSTU3 was missing a null check.
2019-09-10 11:56:07 -04:00
James Agnew
0843a2b02d
Avoid leaking details when canSeeReource rejects a resource from consent
...
service
2019-09-10 11:14:44 -04:00
Ken Stevens
c974e9283b
added search % now test
2019-09-10 10:11:09 -04:00
Diederik Muylwyk
67d24eedff
Merging master into working branch.
...
# Conflicts:
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/entity/TermValueSetConceptDesignation.java
# hapi-fhir-jpaserver-migrate/src/main/java/ca/uhn/fhir/jpa/migrate/tasks/HapiFhirJpaMigrationTasks.java
2019-09-09 19:01:29 -04:00
Diederik Muylwyk
dbe5a36f26
Reset schedule for pre-expansions. Ready for review.
2019-09-09 18:44:25 -04:00
Diederik Muylwyk
7e76c1893f
Fixed bug for large ValueSet expansion with URL parameter; return 404 for unknown ValueSets.
2019-09-09 18:41:00 -04:00
James Agnew
2052df3152
Error with a 404 on invalid valueset
2019-09-09 18:01:41 -04:00
Diederik Muylwyk
19676a01b7
Incremental progress on large ValueSet expansion with URL parameter.
2019-09-09 17:24:01 -04:00
Diederik Muylwyk
c82c3a093f
Removing gaps from concept order when pre-expanding ValueSets.
2019-09-09 15:24:37 -04:00