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8472 Commits

Author SHA1 Message Date
Tadgh 9a1d9d091c
Merge pull request #2978 from hapifhir/fix-batch-pool-breaking 
Fix bundle batch pool bug when identical tags are present.
 2021-09-09 13:51:59 -04:00
Tadgh a4ba65a9fd Don't wrap known errors 2021-09-09 12:27:34 -04:00
Tadgh d5f3b5db18 Merge branch 'master' into fix-batch-pool-breaking 2021-09-09 11:28:44 -04:00
Tadgh ba9271089d
Merge pull request #2974 from hapifhir/ks-20210908-idhelper 
Ks 20210908 idhelper
 2021-09-09 11:10:40 -04:00
Tadgh b3e24078ae Add changelog 2021-09-09 11:01:11 -04:00
Tadgh 41d5e2b8e7 Add failing test, implementation 2021-09-09 10:50:54 -04:00
Ken Stevens 4ab0f7076a remove problematic method 2021-09-09 09:29:45 -04:00
Ken Stevens 661ca02a6a revert clobbered code 2021-09-09 09:28:01 -04:00
Dušan Markovič c6aa21b915 Enable empty username and password in ElasticsearchHibernatePropertiesBuilder 2021-09-09 12:55:04 +02:00
Ken Stevens e77d84d008 fix test 2021-09-09 01:35:35 -04:00
Ken Stevens 5bc571d97d fix test 2021-09-09 01:00:12 -04:00
Ken Stevens 67c8216d73 cleanup 2021-09-08 20:17:14 -04:00
Ken Stevens 81abe26cda improve api 2021-09-08 20:08:06 -04:00
Ken Stevens 519244a2ea unit test passes 2021-09-08 19:14:50 -04:00
Tadgh 0ccd71faf8
Merge pull request #2963 from hapifhir/custom-elastic-index 
Custom elastic index
 2021-09-08 14:29:58 -04:00
Tadgh e4138d9341
Merge pull request #2943 from hapifhir/issue-2901-npe-in-bundle-transaction 
Issue 2901 npe in bundle transaction
 2021-09-08 09:51:55 -04:00
Tadgh fbf6b35d2e
Merge branch 'master' into custom-elastic-index 2021-09-08 08:49:26 -04:00
Tadgh 5d5c45e357 Add whitespace 2021-09-08 08:49:19 -04:00
Tadgh f04cf02be7
Merge branch 'master' into issue-2901-npe-in-bundle-transaction 2021-09-08 08:45:47 -04:00
JasonRoberts-smile 5302af8808
Merge pull request #2955 from hapifhir/jr-20210831-contained-chained-search 
Jr 20210831 contained chained search
 2021-09-07 18:38:18 -04:00
Tadgh c2414d2cae Throw error if misconfigured 2021-09-07 18:35:59 -04:00
Tadgh 436c74616b
Merge branch 'master' into custom-elastic-index 2021-09-07 18:19:35 -04:00
Jason Roberts 34075911ce Merge branch 'master' into jr-20210831-contained-chained-search 2021-09-07 17:28:24 -04:00
Jason Roberts 207558dba3 code review feedback 2021-09-07 17:27:22 -04:00
Kevin Dougan SmileCDR 2dcc4f534f
Resolve Search Causing JOINs on HFJ_RESOURCE Checking RES_TYPE and RES_DELETED_AT Columns (#2964) 2021-09-07 19:38:08 +00:00
Jason Roberts d02e7e0041 changelog 2021-09-07 14:25:06 -04:00
jamesagnew a3743fbcca Add utility method 2021-09-07 14:21:50 -04:00
Tadgh 3ec47cb0ba Bump version as we break the localcontainerentitymanagerfactory bean constructors args 2021-09-07 13:58:22 -04:00
Tadgh 6a2a5d5097 Merge branch 'master' into custom-elastic-index 2021-09-07 13:56:56 -04:00
Tadgh eabe3e7c74 Merge branch 'master' into custom-elastic-index 2021-09-07 13:56:44 -04:00
Tadgh ecd93c9e8a Add changelog 2021-09-07 13:54:28 -04:00
Tadgh 16752f393c Finalize implementation 2021-09-07 13:33:03 -04:00
Tadgh 3e5c2f8bf1
Merge pull request #2957 from ivido/npe_fix 
Fixed NPE in PidToIBaseResourceProcessor
 2021-09-07 12:43:36 -04:00
leif stawnyczy 4d7f53851c issue-2901 cleanup of code/imports 2021-09-07 12:08:32 -04:00
leif stawnyczy 69287b6bc3 issue-2901 review fixes - moving methods to idhelperservice 2021-09-07 11:52:11 -04:00
Jari Maijenburg d3d7c6e97e
Merge branch 'master' into npe_fix 2021-09-07 17:36:05 +02:00
Tadgh ca2a1ff9df Add HsTest replicating boot failure 2021-09-07 10:08:17 -04:00
Jason Roberts 190ca7a2b5 tests for longer chains 2021-09-07 09:40:49 -04:00
Tadgh ad5d56172a Return 2 unused beans 2021-09-07 09:11:48 -04:00
Tadgh 41e8dd93f0
Merge pull request #2960 from hapifhir/ks-20210906-code-cleanup 
extract some methods for readability
 2021-09-06 15:00:32 -04:00
Ken Stevens a1733ed3eb cleanup 2021-09-06 13:55:19 -04:00
Ken Stevens 4281648a33 extract some methods for readability 2021-09-06 13:52:10 -04:00
Ken Stevens ea153334fb extract some methods for readability 2021-09-06 13:50:09 -04:00
Tadgh 710fb3bd89 wip 2021-09-05 00:04:13 -04:00
Tadgh f0a8659653 Fix template and setup static prefix as sample 2021-09-04 23:55:03 -04:00
Jari Maijenburg cdb7ffb0d3 Fixed NPE in PidToIBaseResourceProcessor 2021-09-04 01:44:07 +02:00
leif stawnyczy 64270a51e0 issue-2901 review fixes 2021-09-03 15:36:42 -04:00
Jason Roberts 0dad28fb33 tidy up 2021-09-03 15:02:19 -04:00
Ken Stevens 346e29920a
Issue 2927 convert mdm clear to spring batch (#2929) 
* initial roughout of mdm clear batch job

* still roughing out classes

* finished first draft of reader

* most tests passing now

* all tests pass.  now FIXMEs

* FIXMEs done.  Time for regression.

* fix test

* changelog and docs

* fix test

* pre-review cleanup

* version bump

* move spring autowire deps for cdr

* move spring autowire deps for cdr

* finally got beans working phew

* rearrange method calls so persistence module can perform clear operation on its own

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_mdm/mdm_operations.md

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>

* review feedback

* review feedback

* Remove inheritance

* fix beans

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
Co-authored-by: Tadgh <garygrantgraham@gmail.com>
 2021-09-03 14:58:19 -04:00
Tadgh 28cc51393b
Merge pull request #2953 from hapifhir/2952 
update TestUtil to test Embeddable classes, not just Entity classes
 2021-09-03 11:49:37 -04:00