honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity
8,696 Commits 658 Branches 129 Tags 1.2 GiB
Commit Graph

931 Commits

Author SHA1 Message Date
jamesagnew ff2698d4d1 Merge branch 'rel_5_4' 2021-05-19 09:22:11 -04:00
jamesagnew 994f09e125 Version bump 2021-05-18 21:05:50 -04:00
jamesagnew de56f440cb Version bump 2021-05-18 17:14:14 -04:00
James Agnew b31bb945ad
Add include clause to MSSQL forcedid table index (#2659) 
* Add include clause to MSSQL forcedid table index

* Add changelog

* Test fix

* Bump MSSQL version
 2021-05-16 19:14:51 -04:00
jamesagnew 2068372998 Version bump 2021-05-07 17:43:54 -04:00
jamesagnew 63c4b22cd3 Undo bump 2021-05-07 17:42:50 -04:00
jamesagnew 17e41520a4 Version bump 2021-05-07 17:41:39 -04:00
dependabot[bot] 9e61136c2d
Bump greenmail from 1.5.11 to 1.6.3 (#2626) 
Bumps [greenmail](https://github.com/greenmail-mail-test/greenmail) from 1.5.11 to 1.6.3.
- [Release notes](https://github.com/greenmail-mail-test/greenmail/releases)
- [Commits](https://github.com/greenmail-mail-test/greenmail/compare/release-1.5.11...release-1.6.3)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-05-03 17:31:03 -04:00
dependabot[bot] 91fa23b11a
Bump fhir_core_version from 5.3.10 to 5.3.11 (#2625) 
Bumps `fhir_core_version` from 5.3.10 to 5.3.11.

Updates `org.hl7.fhir.utilities` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.convertors` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.validation` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.dstu2` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.dstu2016may` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.dstu3` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.r4` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.r4` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.r5` from 5.3.10 to 5.3.11

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-05-03 07:58:55 -04:00
jamesagnew 5db01f3139 Build fixes 2021-05-03 05:57:45 -04:00
James Agnew 593230f6bf
Fix openapi redirect (#2624) 
* Fix redirect for openapi

* FIx deps
 2021-05-03 05:32:34 -04:00
James Agnew 0cea403800
Fix vulnerability warning on maven plugin (#2621) 
* Fix vulnerability warning on maven plugin

* Compile fixes

* Fix bootstrap dep

* Test fix

* Fix tests

* FIx deps
 2021-05-02 12:14:32 -04:00
James Agnew 970a9884f0
Avoid tag definition constraint (#2620) 
* Avoid tag definition constraint failure

* Version bumps

* Add changelog

* Avoid guava issue

* Test fix

* Test fix

* Bump pom
 2021-05-01 17:16:15 -04:00
James Agnew 292b350f2c
Bump Junit for to avoid OWASP flag (#2618) 2021-04-30 14:39:16 -04:00
Tadgh 983d811af6
Merge pull request #2587 from hapifhir/issue-2585-enhance-placeholder-targets-logic 
Issue 2585 enhance placeholder targets logic
 2021-04-30 12:55:27 -04:00
Tadgh 78271a2931 Create tests for all possiblye use cases 2021-04-29 15:25:11 -04:00
Kevin Dougan SmileCDR 646faa10e1
2540 - Upgraded the fhir_core_version from 5.3.0 to 5.3.10 (#2545) 
* 2540 - Upgraded the fhir_core_version from 5.3.0 to 5.3.9.

* 2540 - Updated the Unit Test messages due to the upgraded dependencies.

* 2540 - Fixed some additional Unit Test message checks.

* 2540 - Updated the POM to refer to fhir_core_version 5.3.10-SNAPSHOT so a FULL Pipeline Build can run to verify that everything is fixed now.

* 2540 - Added some DEBUG Sysout logging to try and determine why the Pipeline Builds fail for a specific Unit Test when it passes locally...

* 2540 - Added some more logging to try and determine why the Pipeline Builds fail for a specific Unit Test when it passes locally...

* 2540 - Updated a Unit Test to account for a newly returned search param.

* 2540 - Updated a Unit Test to account for a newly returned search param and removed some debug output.
 2021-04-29 15:00:37 -04:00
JP 239d2496ea
CQL hardening and Dstu3 unit tests (#2450) 
* WIP for elm caching

* Bug fixes and a working DSTU3 unit test

* More tests, Address review feedback, add initial docs

* Update to cql-evaluator 1.2.0

* Fixes for documentation
 2021-04-29 14:52:13 -04:00
James Agnew 95d7ba6fa8
Streamline Search SQLs (#2576) 
* Streamline SQL queries

* SQL query tidying

* Add changelog

* Test fixes

* Tests passing

* Ongoing work

* Test fixes

* Test fixes

* Build fix

* Cleanup

* Fixes
 2021-04-28 10:29:09 -04:00
jamesagnew 1d054054c7 Test fixes 2021-04-27 07:03:24 -04:00
jamesagnew 987264b271 Version bump JENA 2021-04-25 17:38:04 -04:00
James Agnew 2ba1005762
OpenAPI Support (#2560) 
* Start work on OpenAPI

* Fixes

* Work on OpenAPI

* Cleanup

* Cleanup

* More swagger work

* Build fix

* More work

* More work

* Add documentation

* Docs fixes

* Add changelog

* License updates

* Add API

* Cleanup

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_plain/openapi.md

Co-authored-by: patrick-vachon-smilecdr <81274188+patrick-vachon-smilecdr@users.noreply.github.com>

* Work on scripts

* Add docs

* Compile fix

* Work on fixes

* Fix tests

* Test fix

* Test fix

* Build fix

* Tests

* Build fix

* Work on pipeline

* Version bump

* Test fix

* Version bump

* Test fix attempts

* Test fix

* Test fix

* Remove accidentally committed files

* Fixes

* Tets fixes

* Test fix

* Test fix

* Test fix

* Test fixes

* Test fixes

* Test fixes

* License header updates

* test fix

* Test fixes

* Test fix

* Test fixes

* Test fix

* Checkstyle bump

Co-authored-by: patrick-vachon-smilecdr <81274188+patrick-vachon-smilecdr@users.noreply.github.com>
 2021-04-25 15:40:50 -04:00
Nick Goupinets 4e266462ec Bumped up version due to breaking changes 2021-04-20 16:17:27 -04:00
dependabot[bot] d94611edf6
Bump junit_version from 5.7.0 to 5.7.1 (#2554) 
Bumps `junit_version` from 5.7.0 to 5.7.1.

Updates `junit-jupiter` from 5.7.0 to 5.7.1
- [Release notes](https://github.com/junit-team/junit5/releases)
- [Commits](https://github.com/junit-team/junit5/compare/r5.7.0...r5.7.1)

Updates `junit-jupiter-api` from 5.7.0 to 5.7.1
- [Release notes](https://github.com/junit-team/junit5/releases)
- [Commits](https://github.com/junit-team/junit5/compare/r5.7.0...r5.7.1)

Updates `junit-jupiter-engine` from 5.7.0 to 5.7.1
- [Release notes](https://github.com/junit-team/junit5/releases)
- [Commits](https://github.com/junit-team/junit5/compare/r5.7.0...r5.7.1)

Updates `junit-jupiter-params` from 5.7.0 to 5.7.1
- [Release notes](https://github.com/junit-team/junit5/releases)
- [Commits](https://github.com/junit-team/junit5/compare/r5.7.0...r5.7.1)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-04-15 08:23:30 -04:00
dependabot[bot] 05b1323638
Bump jarchivelib from 1.0.0 to 1.1.0 (#2553) 
Bumps [jarchivelib](https://github.com/thrau/jarchivelib) from 1.0.0 to 1.1.0.
- [Release notes](https://github.com/thrau/jarchivelib/releases)
- [Commits](https://github.com/thrau/jarchivelib/compare/v1.0.0...v1.1.0)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-04-15 08:21:33 -04:00
dependabot[bot] 9a67f3ee0c
Bump spring_boot_version from 2.4.1 to 2.4.4 (#2550) 
Bumps `spring_boot_version` from 2.4.1 to 2.4.4.

Updates `spring-boot-starter-test` from 2.4.1 to 2.4.4
- [Release notes](https://github.com/spring-projects/spring-boot/releases)
- [Commits](https://github.com/spring-projects/spring-boot/compare/v2.4.1...v2.4.4)

Updates `spring-boot-test` from 2.4.1 to 2.4.4
- [Release notes](https://github.com/spring-projects/spring-boot/releases)
- [Commits](https://github.com/spring-projects/spring-boot/compare/v2.4.1...v2.4.4)

Updates `spring-boot-maven-plugin` from 2.4.1 to 2.4.4
- [Release notes](https://github.com/spring-projects/spring-boot/releases)
- [Commits](https://github.com/spring-projects/spring-boot/compare/v2.4.1...v2.4.4)

Updates `spring-boot-dependencies` from 2.4.1 to 2.4.4
- [Release notes](https://github.com/spring-projects/spring-boot/releases)
- [Commits](https://github.com/spring-projects/spring-boot/compare/v2.4.1...v2.4.4)

Updates `spring-boot-autoconfigure` from 2.4.1 to 2.4.4
- [Release notes](https://github.com/spring-projects/spring-boot/releases)
- [Commits](https://github.com/spring-projects/spring-boot/compare/v2.4.1...v2.4.4)

Updates `spring-boot-configuration-processor` from 2.4.1 to 2.4.4
- [Release notes](https://github.com/spring-projects/spring-boot/releases)
- [Commits](https://github.com/spring-projects/spring-boot/compare/v2.4.1...v2.4.4)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-04-14 20:09:37 -04:00
James Agnew ca2088f3ad
Add framework for Bulk Import (#2538) 
* Start work on bul;k import

* Work on bulk import

* Have batch working

* Working

* Working

* More work

* More work on bulk export

* Address fixmes

* License header updates

* Test fixes

* License header updates

* Test fix

* Test fix

* Version bumps

* Work on config

* Test cleanup

* One more version bump

* Version bump

* CLeanup

* A few additions

* Test fixes

* Test fix

* Test fix

* Migration fix

* Test fix

* Test fix
 2021-04-14 17:41:32 -04:00
jamesagnew 7cf061d76b Jetty version bump 2021-04-06 21:15:11 -04:00
James Agnew a6cbf7eebd
Add support for hierarchycal valueset expansion (#2525) 
* Add support for hierarchycal valueset expansion

* Add changelog

* Add tests

* Cleanup

* Test fix

* Test fixes
 2021-04-06 17:36:54 -04:00
James Agnew b617c7690d
Search Parameter Infrastructure Cleanup (#2522) 
* Search param service cleanup

* Work on collapsing search param

* Search param cleanup

* Work on build

* Test fix

* Test fixes

* Ongoing work

* Test fix

* Compile fix

* Test fixes

* Test fix

* Test fix

* License header updates

* Remove fixme

* Cleanup

* Cleanup
 2021-04-05 17:40:10 -04:00
jamesagnew 8759cdae00 Additional cleanup 2021-03-30 08:20:14 -04:00
Diederik Muylwyk b720c32c1d Version bump 2021-03-29 18:23:16 -04:00
James Agnew dc41d5ad61
Add terminology mapping and display population interceptors (#2488) 
* Start work on code mapping interceptors

* Work on generation

* Add terminology mapping and display population interceptors

* Add changelog

* License header updates

* Test fixes

* Fix typo

* Interceptor fixes

* License header update

* Test fixes

* Mapping fixes

* Version bump

* License header updates

* Add null tests

* Add null guard

* Intermittent fix
 2021-03-21 12:03:57 -04:00
James Agnew 807d9d53f0
Improve performance for large transactions (#2462) 
* Performance tweaks

* Work on processing speed

* Disable no longer relevant tests

* Work on performance

* Work on tests

* Work on large transaction performance

* Add changelog

* Perf tweaks

* Test fixes

* Resolve FIXME

* Fixes

* Test cleanup

* Fix broken changelog entry
 2021-03-09 18:16:02 -05:00
Diederik Muylwyk 11ee6dedd3 Address CVE-2020-27223; bumped minor version of Jetty in root POM 2021-03-06 16:33:05 -05:00
James Agnew b108e43600
Allow partition date for non-partitionable resources (#2407) 
* Allow partition date for searchparam resources

* Cleanup

* Test fix

* Documentation update

* Docs tweak
 2021-02-22 20:49:09 -05:00
James Agnew 3eda19c65a
Version bump (#2400) 
* Version bump

* Docs changes

* Docs tweaks

* Docs tweak

* Spelling fixes

* Docs tweaks
 2021-02-18 11:07:49 -05:00
jamesagnew 919c1dbddc Version bump to 5.3.0 2021-02-17 07:10:13 -05:00
jamesagnew 028ef1b088 Credit for #2365 2021-02-08 09:15:04 -05:00
jamesagnew da847ad08a Credit for #2282 2021-02-07 12:32:41 -05:00
dependabot[bot] 703f7b2e65
Bump mariadb-java-client from 2.5.1 to 2.7.2 (#2334) 
Bumps [mariadb-java-client](https://github.com/mariadb-corporation/mariadb-connector-j) from 2.5.1 to 2.7.2.
- [Release notes](https://github.com/mariadb-corporation/mariadb-connector-j/releases)
- [Changelog](https://github.com/mariadb-corporation/mariadb-connector-j/blob/master/CHANGELOG.md)
- [Commits](https://github.com/mariadb-corporation/mariadb-connector-j/compare/2.5.1...2.7.2)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-02-06 17:34:26 -05:00
Kevin Dougan SmileCDR cfc5b87e3e
Removed an old comment from the root pom. (#2359) 2021-02-04 15:21:39 -05:00
JP 222bb7a8c0
Update to release versions of cql components (#2357) 2021-02-04 15:00:03 -05:00
James Agnew e195bdc065
Try to avoid codecov fluctuations (#2344) 
* Try to avoid codecov fluctuations

* Less slowdown

* Another build tweak

* Build tweak

* Container bump

* Another build attempt

* One more test
 2021-02-03 09:44:57 -05:00
jamesagnew c0142a67b1 Credit for #2340 2021-02-02 14:27:42 -05:00
jamesagnew d65ed820a5 Javadoc build fix 2021-02-01 12:13:47 -05:00
Kevin Dougan SmileCDR 2308d8f44b
Merge CQL Initial Implementation Into master (#2330) 
* CQL initial implementation
 2021-01-29 16:35:38 -05:00
jamesagnew 589eb3158e Credit for #2310 2021-01-29 11:02:51 -05:00
James Agnew 909d9f742c
Enable Auto-reference versions in JPA (#2323) 
* Automatic reference versions

* Auto reference versions

* resolve fixmes

* Add changelog

* Test fixes

* Test fixes

* Resolve fixmes

* Work on versioning

* Add support for _includes

* Update headers

* Change visibility

* One more tweak

* One more API tweak

* Fixes

* Account for review comments

* Fix errorprone reported issue

* Test fix

* Test fixes

* Test fixes
 2021-01-27 14:49:10 -05:00
dependabot[bot] feff734736
Bump jaxb-runtime from 2.3.1 to 3.0.0 (#2289) 
* Bump jaxb-runtime from 2.3.1 to 3.0.0

Bumps jaxb-runtime from 2.3.1 to 3.0.0.

Signed-off-by: dependabot[bot] <support@github.com>

* Bump jaxb-runtime from 2.3.1 to 3.0.0

Bumps jaxb-runtime from 2.3.1 to 3.0.0.

Signed-off-by: dependabot[bot] <support@github.com>

* Add jakarta bindings

* Dependency cleanup

* More depndency cleanup

* Work on deps

* Replace transaction annotation

* Cleanup

* Another fix

* Build fix

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
 2021-01-22 11:24:23 -05:00
Tadgh 7159d65902 bump databind version for CVE 2021-01-21 10:03:16 -05:00
James Agnew 14b0688f69
Bump core version to 5.2.16 (#2308) 
* Bump core library version

* Test fix

* Build fixes

* Some test fixes

* One more bit of docs

* Build fix

* Test fix

* Test fix

* Docs fix
 2021-01-21 05:30:23 -05:00
Tadgh fa17ea35cd Minor version bump for CVE-2021-22132 2021-01-20 11:31:00 -05:00
dependabot[bot] 2db35f4dcb
Bump spring_version from 5.3.2 to 5.3.3 (#2295) 
Bumps `spring_version` from 5.3.2 to 5.3.3.

Updates `spring-beans` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-context` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-context-support` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-core` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-jdbc` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-messaging` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-orm` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-test` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-tx` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-web` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-webmvc` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Updates `spring-websocket` from 5.3.2 to 5.3.3
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.3.2...v5.3.3)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-17 17:43:11 -05:00
dependabot[bot] 391a6d1a3f
Bump ph-schematron from 5.2.0 to 5.6.5 (#2184) 
* Bump ph-schematron from 5.2.0 to 5.6.5

Bumps [ph-schematron](https://github.com/phax/ph-schematron) from 5.2.0 to 5.6.5.
- [Release notes](https://github.com/phax/ph-schematron/releases)
- [Commits](https://github.com/phax/ph-schematron/compare/ph-schematron-parent-pom-5.2.0...ph-schematron-parent-pom-5.6.5)

Signed-off-by: dependabot[bot] <support@github.com>

* Fix compile error

* Build fix

* Add test logging

* Test fix

* Resolve classpath duplicates

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
 2021-01-17 14:27:26 -05:00
dependabot[bot] cc2a1c16c8
Bump commons-collections4 from 4.3 to 4.4 (#2292) 
Bumps commons-collections4 from 4.3 to 4.4.

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-17 13:27:48 -05:00
jamesagnew 9d8bbaf868 Add credit for #2054 2021-01-17 09:44:18 -05:00
dependabot[bot] 8a0b0885f2
Bump jersey_version from 2.25.1 to 3.0.0 (#2245) 
Bumps `jersey_version` from 2.25.1 to 3.0.0.

Updates `jersey-server` from 2.25.1 to 3.0.0

Updates `jersey-container-servlet-core` from 2.25.1 to 3.0.0

Updates `jersey-container-jetty-http` from 2.25.1 to 3.0.0

Updates `jersey-media-moxy` from 2.25.1 to 3.0.0

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-16 19:13:54 -05:00
dependabot[bot] 472eba040a
Bump jansi from 1.18 to 2.1.1 (#2253) 
Bumps [jansi](https://github.com/fusesource/jansi) from 1.18 to 2.1.1.
- [Release notes](https://github.com/fusesource/jansi/releases)
- [Changelog](https://github.com/fusesource/jansi/blob/master/changelog.md)
- [Commits](https://github.com/fusesource/jansi/compare/jansi-project-1.18...jansi-2.1.1)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-16 19:05:31 -05:00
James Agnew 1dc4fb2206
Make quantity indexes use double datatype (#2290) 
* Make quantity indexes use double datatype

* Add changelog

* Test fixes

* Test fixes

* Disable test
 2021-01-16 18:44:15 -05:00
dependabot[bot] 24ac055b50
Bump jackson_version from 2.11.2 to 2.12.1 (#2287) 
Bumps `jackson_version` from 2.11.2 to 2.12.1.

Updates `jackson-annotations` from 2.11.2 to 2.12.1
- [Release notes](https://github.com/FasterXML/jackson/releases)
- [Commits](https://github.com/FasterXML/jackson/commits)

Updates `jackson-core` from 2.11.2 to 2.12.1
- [Release notes](https://github.com/FasterXML/jackson-core/releases)
- [Commits](https://github.com/FasterXML/jackson-core/compare/jackson-core-2.11.2...jackson-core-2.12.1)

Updates `jackson-datatype-jsr310` from 2.11.2 to 2.12.1

Updates `jackson-dataformat-yaml` from 2.11.2 to 2.12.1
- [Release notes](https://github.com/FasterXML/jackson-dataformats-text/releases)
- [Commits](https://github.com/FasterXML/jackson-dataformats-text/compare/jackson-dataformats-text-2.11.2...jackson-dataformats-text-2.12.1)

Updates `jackson-module-jaxb-annotations` from 2.11.2 to 2.12.1
- [Release notes](https://github.com/FasterXML/jackson-modules-base/releases)
- [Commits](https://github.com/FasterXML/jackson-modules-base/compare/jackson-modules-base-2.11.2...jackson-modules-base-2.12.1)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-16 13:47:30 -05:00
jamesagnew ef407d85bf Add logging 2021-01-12 08:56:12 -05:00
jamesagnew 128d384153 Credit for #2273 2021-01-07 06:03:31 -05:00
jamesagnew b79d154d81 Dependency version bumps 2021-01-06 10:21:25 -05:00
Tadgh efc6809ea6
Replacing Hibernate Search 5 with Hibernate Search 6 (#2190) 
* Beginning work on converting to hibernate search 6
* replace all out of date properties
* replace all POM references to old versions
* remove the shaded ES jars as HS6 supports 7.9
* Convert "Bridges" to RoutingBinder and RoutingBridge
* Modernize all indexing annotations
* Begin refactoring of search queries (wip)

* Fix spatial API changes, work on BaseTermReadSvcImpl

* Most of the way through the various filter property conversions

* Finished i think with BaseTermReadSvcImpl

* Compiling, but definitely broken

* Start test compilation failures

* All tests compiling (i think)

* remove suggest keywords operation

* Fix bootstrap errors, still have to deal with transient fields

* Rollback CR

* More refactoring, got IDs baked back into docs

* Fix coord util, fix a few more fields which require projection

* merge fixes

* begin refactor of valuesetexpansion tests

* fix another test

* Update tests

* remove todos, add TestContainers

* Fix descendant in

* Add testcontainers, fix another test

* fix more tests, replace embedded es

* Rip out embedded elastic, replace with TestContainer

* merge conflicts for new analyzers

* Bump to CR2 for hibernate search 6. Add forgotten CLI dep. Add backwards compatible codecs

* Remove dead deps, update testcontainer

* Remove java-hamcrest

* Pull asserts up, refactor tests to pass in RP tests

* Update V2 check

* Remove suggest keyword tests

* Split line for testing

* Fix perhaps one of the dumbest programming mistakes in my career so far

* Refactor tests which no longer rely on a strict known order

* Fix up test config, disable log test temporarily

* Remove log4j from being transitively pulled in. re-enable test

* Update log4j exclusions with new bridge. Update test to check for core class

* Move dependency to root pom in dep management section

* Update changelog, add changelog for HS6 with ES requirements. Remove dead comment

* update testst, remove todos

* Add hibernate props provider method, add elastic regexp query

* Add todo for high level client builder

* Modify ElasticsearchRestClientFactory to support HTTPS hosts

* Remove protocol extraction from rest url

* do we even need to index this...?

* remove purge of non-indexed resources

* Add longer timeout to testcontainers

* Add task to add docker CLI to azure pipeline via task, for testcontainers

* WIP remove this

* Dont update version

* Add test for duplicate termconcepts

* Use real hibernate ORM methods

* merge issues

* Add partitionsettigns bean to match master

* Trying to debug testcontainers on azure...

* Trying to debug testcontainers on azure...

* Run even on previous failure

* Fix testcontainer port binds

* Add full text logs attaching, and test reporting

* I love yaml

* Remove comment

* Refactor delta remove to not do a once-over traversal and flatten all children pre-delete. Resolves transaction commit boundary issue

* Modify TX beheaviour

* wip

* Rework to use config and mocked beans for partition-aware lastN

* rework to not use beans and just inject vars i need for test, keps test envs cleaner

* update azure pipeline to only copy test results

* Remove erroneous publish

* Always get test logs

* Make it so indexing works,

* Add todos

* revert deleteByPid

* Work on test fixes

* Test fixes

* Test fixes

* Another test fix

* Test fix

* Work on tests

* Test fixes

* All tests passing locally

* Fix test failure

* FIx build error

* Rename usages of HibernateDialectProvider -> HibernatePropertiesProvider

* Update ngram of token filters

* Tidying

* subvert the purpose of hibernate elastic props builder to inject template

* dead space

* Rename changed class

Co-authored-by: jamesagnew <jamesagnew@gmail.com>
 2021-01-05 17:56:59 -05:00
dependabot[bot] 86f254cd66
Bump datasource-proxy from 1.5.1 to 1.7 (#2267) 
* Bump datasource-proxy from 1.5.1 to 1.7

Bumps [datasource-proxy](https://github.com/ttddyy/datasource-proxy) from 1.5.1 to 1.7.
- [Release notes](https://github.com/ttddyy/datasource-proxy/releases)
- [Changelog](https://github.com/ttddyy/datasource-proxy/blob/1.x/CHANGELOG.md)
- [Commits](https://github.com/ttddyy/datasource-proxy/compare/datasource-proxy-1.5.1...datasource-proxy-1.7)

Signed-off-by: dependabot[bot] <support@github.com>

* Add changelog

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
 2021-01-04 10:32:52 -05:00
dependabot[bot] aa584d5b2d
Bump maven-dependency-plugin from 3.0.2 to 3.1.2 (#2266) 
Bumps [maven-dependency-plugin](https://github.com/apache/maven-dependency-plugin) from 3.0.2 to 3.1.2.
- [Release notes](https://github.com/apache/maven-dependency-plugin/releases)
- [Commits](https://github.com/apache/maven-dependency-plugin/compare/maven-dependency-plugin-3.0.2...maven-dependency-plugin-3.1.2)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-04 06:49:12 -05:00
dependabot[bot] 0ac9ea643a
Bump plexus_compiler_api_version from 2.8.5 to 2.8.8 (#2243) 
Bumps `plexus_compiler_api_version` from 2.8.5 to 2.8.8.

Updates `plexus-compiler-api` from 2.8.5 to 2.8.8
- [Release notes](https://github.com/codehaus-plexus/plexus-compiler/releases)
- [Commits](https://github.com/codehaus-plexus/plexus-compiler/compare/plexus-compiler-2.8.5...plexus-compiler-2.8.8)

Updates `plexus-compiler-javac` from 2.8.5 to 2.8.8

Updates `plexus-compiler-javac-errorprone` from 2.8.5 to 2.8.8

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-04 06:18:36 -05:00
jamesagnew 8df8ed7838 Bump hibernate version 2021-01-03 16:56:02 -05:00
jamesagnew 57347ddb63 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2021-01-01 15:52:06 -05:00
jamesagnew ec712e086c Version bump mockito 2021-01-01 15:50:00 -05:00
jamesagnew ed4d7d7eb6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2021-01-01 15:07:37 -05:00
jamesagnew f30999b053 License header updates 2021-01-01 15:07:23 -05:00
jamesagnew 4373b47207 Library version bumps 2021-01-01 15:06:55 -05:00
Tadgh e79114e2ec
Un-revert the MDM changes, now that issues have been addressed (#2226) 
* Backward compatibility changes

* Revert "Revert "Remove all references to Person from EMPI.""

* Updated docs

* Removed mdm channel references

* Initial implementation

* fix coarseness bug. Fix tests. reinitialize silly bean

* Add forgotten json file

* Generic provider PoC

* Refactored provider to use BundleBuilder

* Removed version-specific MDM providers

* Addressed code review comments

* Fixed after merge

* Fixed docs

* MDM SVG for Update Use Cases

* Removed obsolete docs

Co-authored-by: Nick <nick.goupinets@smilecdr.com>
Co-authored-by: Nick Goupinets <73255752+nvg-smile@users.noreply.github.com>
 2020-12-17 10:12:53 -05:00
dependabot[bot] a689beffc5
Bump spring_version from 5.2.3.RELEASE to 5.2.9.RELEASE (#2085) 
Bumps `spring_version` from 5.2.3.RELEASE to 5.2.9.RELEASE.

Updates `spring-beans` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-context` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-context-support` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-core` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-jdbc` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-messaging` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-orm` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-test` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-tx` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-web` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-webmvc` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Updates `spring-websocket` from 5.2.3.RELEASE to 5.2.9.RELEASE
- [Release notes](https://github.com/spring-projects/spring-framework/releases)
- [Commits](https://github.com/spring-projects/spring-framework/compare/v5.2.3.RELEASE...v5.2.9.RELEASE)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-12-14 14:29:34 -05:00
dependabot[bot] 092da2e93f
Bump slf4j_version from 1.7.28 to 1.7.30 (#2242) 
Bumps `slf4j_version` from 1.7.28 to 1.7.30.

Updates `slf4j-android` from 1.7.28 to 1.7.30

Updates `slf4j-api` from 1.7.28 to 1.7.30
- [Release notes](https://github.com/qos-ch/slf4j/releases)
- [Commits](https://github.com/qos-ch/slf4j/compare/v_1.7.28...v_1.7.30)

Updates `jcl-over-slf4j` from 1.7.28 to 1.7.30
- [Release notes](https://github.com/qos-ch/slf4j/releases)
- [Commits](https://github.com/qos-ch/slf4j/compare/v_1.7.28...v_1.7.30)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-12-14 10:49:19 -05:00
Kevin Dougan SmileCDR 9036df25fa
2229 - Remove support for the upload-igpack CLI command. (#2233) 
* 2229 - Remove support for the upload-igpack CLI command.

* 2229 - Revert changes made to the ValidateCommand class since it only takes an igpack as a parameter and therefore, should NOT have been removed.

* 2229 - Remove the igpack option from the Validate command.

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_3_0/2229-remove-upload-igpack-command.yaml

Co-authored-by: James Agnew <jamesagnew@gmail.com>

Co-authored-by: Kevin Dougan <kevindougan@kevins-mbp.lan>
Co-authored-by: James Agnew <jamesagnew@gmail.com>
 2020-12-14 09:50:16 -05:00
jamesagnew 0dc0e91766 Credit for #2241 2020-12-14 06:06:07 -05:00
Tadgh 0938d72b51
Revert "Remove all references to Person from EMPI." 2020-12-09 14:57:00 -05:00
Nick 4352e0a61f Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-12-03 11:28:21 -05:00
dependabot[bot] 1b263f1c32
Bump jetty_version from 9.4.34.v20201102 to 9.4.35.v20201120 (#2210) 
Bumps `jetty_version` from 9.4.34.v20201102 to 9.4.35.v20201120.

Updates `jetty-http` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-servlets` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-io` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-continuation` from 9.4.34.v20201102 to 9.4.35.v20201120

Updates `jetty-security` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-servlet` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-server` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-util` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-webapp` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `jetty-xml` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Updates `websocket-api` from 9.4.34.v20201102 to 9.4.35.v20201120

Updates `websocket-client` from 9.4.34.v20201102 to 9.4.35.v20201120

Updates `websocket-server` from 9.4.34.v20201102 to 9.4.35.v20201120

Updates `jetty-maven-plugin` from 9.4.34.v20201102 to 9.4.35.v20201120
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.34.v20201102...jetty-9.4.35.v20201120)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-12-02 14:47:10 -05:00
Nick Goupinets d63c580e82 Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-12-01 13:18:42 -05:00
James Agnew 1e5def260c
Bump woodstox version (#2199) 2020-11-27 19:49:06 -05:00
Nick Goupinets 2a3b72db17 Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references 2020-11-27 16:54:04 -05:00
jamesagnew da75ff8da2 Credit for #2197 2020-11-26 10:08:56 -05:00
dependabot[bot] 27cff8153b
Bump jetty_version from 9.4.30.v20200611 to 9.4.34.v20201102 (#2176) 
Bumps `jetty_version` from 9.4.30.v20200611 to 9.4.34.v20201102.

Updates `jetty-http` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-servlets` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-io` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-continuation` from 9.4.30.v20200611 to 9.4.34.v20201102

Updates `jetty-security` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-servlet` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-server` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-util` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-webapp` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `jetty-xml` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Updates `websocket-api` from 9.4.30.v20200611 to 9.4.34.v20201102

Updates `websocket-client` from 9.4.30.v20200611 to 9.4.34.v20201102

Updates `websocket-server` from 9.4.30.v20200611 to 9.4.34.v20201102

Updates `jetty-maven-plugin` from 9.4.30.v20200611 to 9.4.34.v20201102
- [Release notes](https://github.com/eclipse/jetty.project/releases)
- [Commits](https://github.com/eclipse/jetty.project/compare/jetty-9.4.30.v20200611...jetty-9.4.34.v20201102)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-11-19 20:20:01 -05:00
NG 4bbe4a3ef7 Merge branch 'gg_20201105-remove-person-references' of https://github.com/jamesagnew/hapi-fhir into gg_20201105-remove-person-references 2020-11-19 14:56:31 -05:00
NG 4378df7dcb Removed more EMPI refs from the docs 2020-11-19 14:56:18 -05:00
Tadgh 953b662827 Merge branch '2161-refactor-empi' into gg_20201105-remove-person-references 2020-11-19 14:24:51 -05:00
Tadgh 75c0c25d7b remove references to EMPI 2020-11-18 19:50:00 -05:00
jamesagnew 0c31741eec Version bump to 5.3.0-SNAPSHOT 2020-11-18 14:52:43 -05:00
jamesagnew 4d441ad7f2 Version bump to 5.2.0 2020-11-18 06:30:20 -05:00
James Agnew 228e75b501
Bump core to latest versions (#2154) 
* Bump core to latest versions

* Compile fix

* Bump to non snapshot core library
 2020-11-03 15:43:37 -05:00
jamesagnew 6ccb7c8312 Bump HTTPClient version 2020-10-28 10:28:04 -04:00
jamesagnew 783cbb3cf8 Bump postgres driver version 2020-10-26 19:34:50 -04:00
James Agnew 8000d2d0cf
SQL Join Rework (#2086) 
* switched to adding annotations.  Just did a test with Token, but the sql looks clean.

* switched to adding annotations.  Just did a test with Token, but the sql looks clean.

* added the other six index links

* trying different annotations

* Start testing

* Update resources on package install

* Add changelog

* Join rework

* CLean up SQL builder

* Add docs

* SP rework

* Join work

* Work on params

* Work on refactor

* Work on chains

* Work on joins

* Rework queries

* Work on queries

* Many more tests passing

* Refs test

* Work on sorting

* Work on tests

* More joins work

* Work on tests

* Work on queries

* Tests passing

* More test fixes

* Test fixes

* Work on SQL

* Tests passing

* Add some tests

* Add some tests

* License headers

* Use entity manager to get datasourcd

* One more fix

* Model cleanup

* Ongoing work

* Fixes

* Fixes

* Work on joins

* Ongoing fixes

* Merge conflict

* Cleanup

* clean up unused fields

* Work on join

* COmpile fix

* Rework querying

* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/HibernateDialectProvider.java

Co-authored-by: Ken Stevens <khstevens@gmail.com>

* Address review comments

* Resolve fixmes

* Test fix

* Test fixes

* Test fix

Co-authored-by: Ken Stevens <khstevens@gmail.com>
 2020-10-26 05:24:26 -04:00
jamesagnew 0fdff3e052 Credit for #2142 2020-10-23 10:33:49 -04:00
James Agnew aa3da9b05f
Bump bootstrap version (#2128) 
* Bump bootstrap version

* Add changelog

* Resolve fixme

* Rmove test code
 2020-10-12 20:47:14 -04:00
jamesagnew 7d150858dc Credit for #2118 2020-10-12 20:45:02 -04:00