* Add method to get all jobs of a certain status
* add queries
* add tests
* Refactor so extra parameter is not added
* Version bump
* Fix broken test
* Revert accidental change to pom unrelated to version
---------
Co-authored-by: David Chen <david.chen@smilecdr.com>
* added mdm search all partition for golden resource functionality
* added mdm partition setting
* build header fix
* test fixes and added missing side effect of allowing cross partition links on opeartions
* added changelog, also test fixes
* fixed changelog to an actual yaml file
* review fixes, also simplified tests
* reverted one test because the original test schenario was correct
* added setting clearing in afterEach method so test dont fail while run in maven
* bump to pre-15
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Co-authored-by: Long Ma <long@smilecdr.com>
* Failing test
* Add method to expunge collection of deleted resources
* Failing test passes
* Add changelog
* Version bump
* Forgot to commit change
* Update test
* Check type validity
* Fix broken tests
---------
Co-authored-by: David Chen <david.chen@smilecdr.com>
* enabled test
* added explanations to disabled tests
* added explanations to disabled tests
* yay enabled another one
* yay enabled another one
* testEverythingWithLargeSet2 failing intermittently
* fix intermittent regression introduced by splitting test class
* test passes
* need to document
* updated documentation
* prereview cleanup
* change log
* cleanup
* cleanup
* added breaking changes
* update changelog and breaking changes upgrade document to reverse the change to always return 200 per the spec.
* back out documentation change
* update documentation
* fix tests
* dstu2
* dstu3
* fix r4 validation warning test
* changelog
* hapi-fhir version bump to 6.5.10-SNAPSHOT
* fix cdr test
* fix tests
* remove accidental commit
---------
Co-authored-by: Ken Stevens <ken@smilecdr.com>
* Start work on refchains
* Semi working
* Add tests for transactions
* Add docs and lots of tests
* Add changelog
* Add tests
* Work on cleanup
* Add document operations
* Test fix
* Test fix
* Fixes
* Fix typo
* Test fix
* Test update
* Test updates
* Test fix
* Test fixes
* Test additions
* Test fix
* Add some javadocs
* Test fixes
* Intermittent test fix
* Doc tweak
* Test fixes
* Merge master in
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa/search.md
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Review comments
* Version bump
* Add license
---------
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* First commit with new maven deps for envers and stubbed changelist.
* Add repositoryFactoryBeanClass = EnversRevisionRepositoryFactoryBean.class to BaseAppCtxPersistence. Comment it out in JpaConfig. Add constant for hibernate.integration.envers.enabled. Hard-code envers to false. App starts without error. Basic smoke testing for MpmLink update works.
* Add mdmLink code to retrieve envers history and unit test it.
* Initial code to handle envers from HapiFhirEnversRevision along with a custom extension of the revision/REVINFO entity.
* Add changelist and tweak table/sequence/field names and clean up the HapiFhirJpaMigrationTasks method.
* Fix some unit test failures and address TODOs.
* Ensure hard-coded deactivation of envers is overridden by unit tests.
* Remove commented-out code.
* Address code review comments.
* Remove sysout traces.
* Tweaks to poms with comments explaining why I left the versions in the plugin dependencies. Get rid of a duplicate envers dependency.
* Bump hapi-fhir version to 6.5.5-SNAPSHOT.
* Disable intermittently failing test: PartitionedSubscriptionTriggeringR4Test.testCreateSubscriptionInPartitionAndResourceInDifferentPartition
* Try disabling Batch2CoordinatorIT failing test and see if branch pipeline passes.
* Add back hapi-fhir-validation-resources-r4b to hapi-fhir-jpaserver-base pom.xml.
* Bump hapi-fhir to 6.5.6-SNAPSHOT.
* Bump rest of hapi-fhir to 6.5.6-SNAPSHOT.
* Fix compile error on Batch2CoordinatorIT.
* Change revision ID column from integer to long in both the revision entity and the migration tasks. Fix a bug with the migration tasks having the wrong name for the timestamp column.
* Fix interface in MongoDB to return Long for the revision ID instead of Int. Implement TINYINT for all supported database products. Keep TARGET_TYPE column at 40 instead of 100 for now since otherwise the schema migration test will fail. Also, don't try to rename the foreign key or the schema migration test will fail.
- use a separate enum for the states - chunks have different transitions than instances.
- use transactional update events for work-chunk state transitions
- introduce spec-test to define behaviour of batch2 storage
- replace synchronized facade with simpler ProxyUtil handler.
- change job cancellation to db update query