* Validation enhancements
* Work on validation api reworking
* Keep working on validation API
* Keep working on new term API
* Work on validation api
* Ongoing work on validation
* Work on integrating validation
* Work on validation API
* Add to validation API
* Work on validation
* Work on API
* Work on validation
* Work on validation API
* Work on validation API
* Work on validation api
* Work on validation API
* Work on validation api
* Validation API changes
* Work on API
* More work on validationo API
* Work on validation API
* FIxes
* WOrk on validation api
* Work on validation API
* Tests passing!
* More cleanup
* More validation API changes
* Fix intermittent test failure
* Package reorg
* Validation API work
* Work on doocumentation
* Work on API
* More work on new validation API
* Fix errorprone-reported error
* Test fixes
* Documentation updates
* Documentation tweaks
* Work on API
* Bean name adjustments
* Build fixes
* Some test fixes
* Some CI surefire improvements
* Build tweak
* More tweak
* Update azure-pipelines.yml for Azure Pipelines
* Update azure-pipelines.yml for Azure Pipelines
* One more CI attempt
* Update azure-pipelines.yml for Azure Pipelines
* Tweak command line
* Another build test fixc
* More build cleanup
* Start refactoring terminology delta operations
* Work on delta operations
* Work on concept saving
* Split term services into smaller services
* Work on term delta operations
* Work on term svcs
* Work on term operations
* More work on delta uploader
* Add a test
* Wrk on term service
* Fix compile error
* Some refactoring
* Test fix
* Test fix
* Test fixes
* Test fix
* Test fixes
* Test fixes
* Work on delta
* Work on tests#
* Test fixes
* Improve resequencing logic
* Build test
* More testing
* More build testing
* More work on tests
* CHange test logging
* Fix term service PID issue
* Update src/changes/changes.xml
Co-Authored-By: Diederik Muylwyk <diederik.muylwyk@gmail.com>
* Address review comment
* Some cleanup
* Test fix
* Fix some tests
* Test fixes
* ElasticSearch work
* Add ElasticSearch properties builder
* Clean up POM
* Remove redundant project
* Try to troubleshoot embedded elasticsearch
* Another test attempt
* Add credentials to elasticsearch config
* Work on lastn
* Address review comments
* A couple of test fixes
* Add some logging
* Add more test logging
* Work on some test logging
* Fix compile error
* Work on codecov
* Work on codecov
* Remove test debug messages
* Set up CI with Azure Pipelines
[skip ci]
* Update azure-pipelines.yml for Azure Pipelines
* Skip tests for a build
* Work on pipeline
* Update azure-pipelines.yml for Azure Pipelines
* Interceptors docs
* Test fix
* Disable releases from snapshot repo
* Try disabling jitpack
* Fix dependency issue
* A couple of test fixes
* Change to trigger a build
* Force a change to trigger a build
* Force a build
* FIx test
* Start working on subscription processor
* Work on new scheduler
* Test fixes
* Scheduler refactoring
* Fix test failure
* One more test fix
* Updates to scheduler
* More scheduler work
* Tests now all passing
* Ongoing work on export
* Ongoing scheduler work
* Ongoing testing
* Work on export task
* Sync master
* Ongoing work
* Bump xml patch version
* Work on provider
* Work on bulk
* Work on export scheduler
* More test fies
* More test fixes
* Compile fix
* Reduce logging
* Improve logging
* Reuse bulk export jobs
* Export provider
* Improve logging in bulk export
* Work on bulk export service
* One more bugfix
* Ongoing work on Bulk Data
* Add changelog
* Ongoing work on core structures suport
* Ongoing work on this merge
* Ongoing work to clean up structures
* Credit for #1179
* Address compile issues
* Latest changes
* Work on parallel execution
* Work on getting tests passing
* Add H2 to migrator
* Test fix
* Start working on this
* Ongoing fixes to H2 branch
* Work on fixing tests
* Updated fixes
* Some test fixes
* More work on H2 migration
* Fixes to try and get the H2 migration building
* Test seem to be passing!
* Tweaks to locale randomization
* Add changelog
* Make IBundle list interface more flexible
* Make matchResourceLinks visible
* Make matchResourceLinks visible
* Pull in-memory matching functionality out of subscription module into dedicated classes in searchparam module
* Added more accessors to version independent resource classes
* improved forcedid matching (needs to be verified by James)
filter out nulls from HashMapProvider.searchAll() (hopefully no tests depend on this)
* add AnyComposition
* cleanup of Any classes
* create searchparam config so people can use that module without using subscriptions
* create searchparam config so people can use that module without using subscriptions
* fix broken test
* added derivedFrom
* renamed daoRegistry.getResourceDaoIfExists to getResourceDaoOrNull
also added method to add a new dao to the registry and retrieve registered types
* TokenParam.equals
* add error check to searchable hashmap resource provider
* added support for R4
* add successor to measure
* delete conflict hook
start with failing test
* test passes.
hook is called.
* added delete conflict hook
all delete conflict tests pass
* added javadoc
* Performance test
* test bad interceptor case
* typo
* rename criteria matcher
* added support for multiple topics
* fix method name
* add effective period
* Temporarily excluding StressTest from build to try to get Travis under time limit
* change log
* review feedback
* review feedback
* review feedback
* Search fixes
* Add some tests
* CHangelog
* Some cleanup of the query tracker
* FIx XML issue in changelog
* Test fixes
* SOme test fixes
* Address review comments
* Fix test breakage
* Initial refactoring to move database matcher out into its own class
* MAJOR REFACTOR: Pulled indexing code out of BaseHapiFhirDao into a new class ResourceIndexedSearchParams
* Moved calculateHashes
* Replaced @Bean definitions in BaseConfig.java with @ComponentScan
Annotated bean classes with either @Service (if it's stateless) or @Component (if it's stateful). It doesn't really matter which annotation is used, but it's helpful to see at a glance whether a bean is stateful or stateless.
* Move services out of BaseHapiFhirDao
Moved services required by ResourceIndexedSearchParams out of BaseHapiFhirDao and into new classes called LogicalReferenceHelper, IdHelperService, MatchUrlService, and DaoProvider.
Converted SearchBuilder into Prototype Bean
Mark Spring components that depend on daos and entitymanagers with @Lazy so they aren't picked up by hapi-fhir-spring-boot-autoconfigure.
* Added SubscriptionMatcherInMemory
Moved static data out of BaseHapiFhirDao into ResourceMetaParams
Moved translateMatchUrl methods out of BaseHapiFhirDao into MatchUrlService bean
Simplified SubscriptionMatcherInMemory to not depend on entity or dao
Turned all subscribers into prototype beans
* Moved searchParam method out to mySearchParamProvider
Also removed dao and contest parameters from of myMatchUrlService methods
Moved code out of SearchBuilder into SearchParameterMap.clean() so it can be used by inMemoryMatcher
Introduced a new composite subscription matcher that tries to match in memory and if it finds a parameter in the criteria it doesn't support, it falls back to the database matcher.
* Added support for references
Also fixed a small bug in SearchParameterMap that was missing the ";" after "_has" when creating a normalized query from search params.
* Finished implementing all tests from FhirResourceDaoR4SearchNoFtTest
* Make in-memory matcher configurable, disabled by default
* Validate Subscription criteria when they're submitted
Send HTTP 422 UnprocessableEntityException if the criteria fail validation.
* fixed Sonar "Blocker" issues.
* Don't reload the resource before sending it out
Since we can always force a reload using restHookDetails.isDeliverLatestVersion
* Added tests to cover Custom Search param.
* Split ResourceIndexedSearchParam into separate state and service classes
* Cleaned up SearchBuilder.
Removed uses of myCallingDao as an injection mechanism.
Left // FIXME KHS cookie crumbs to clean up
* Reduced dependencies on BaseHapiFhirDao
Removed methods from IDao interface that were used for injection
* Updated change log
* Replace phloc with ph
* Enable schematron tests
* Make HAPI-FHIR ph-schematron on OSGI
* Work on getting tests passing
* Another test fix
* Fix up transaction handling for DSTU2
* Add changelog
* Avoid double transaction
* Dont use readonly
* One more test fix
* Update to snapshow build
* Resolve a circular dependency
* Try to fix tests
* Solve recurring NPE in DSTU2 tests
* Fix one more test
* Test fix
* More test threading fixes
* One more attempt to get tests passing
* Refactoring for tests
* Refactoring for tests
commit fa508e27b2
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Aug 14 20:38:12 2017 -0400
Fix android tests
commit dea567e960
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Aug 14 20:25:28 2017 -0400
Still trying to get tests passing
commit 6bbfec381f
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Aug 14 20:00:59 2017 -0400
Work on getting tests passing
commit 5e0a7672b7
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Aug 14 18:12:58 2017 -0400
Work on GraphQL integration
commit 1c88fd154d
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Aug 14 15:19:41 2017 -0400
Upgrade subscriptions to use interceptors across the board
commit de5c01c00d
Author: James <jamesagnew@gmail.com>
Date: Mon Aug 14 09:09:32 2017 -0400
Work on subscription
commit 387d504098
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Aug 14 06:19:25 2017 -0400
Work on subscriptions
commit 95a607d155
Merge: d851de7ffdb9dbd64101
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Aug 13 22:42:22 2017 -0400
Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor
commit d851de7ffd
Merge: 5413b276af209752cd63
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Aug 13 22:42:00 2017 -0400
Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor
commit b9dbd64101
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 22:40:35 2017 -0400
Work on subscriptions
commit 12f89a423a
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 14:38:51 2017 -0400
Minimize validation resources
commit f6868cce5c
Merge: 3b80779fd31e158311d8
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 14:05:34 2017 -0400
Forward port fix for #710
Merge branch 'master' into hapi3_refactor
commit 3b80779fd3
Merge: 1f534985e8356d9acaf7
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 12:31:09 2017 -0400
Forward port #705, #708, and #710
Merge branch 'master' into hapi3_refactor
commit 1f534985e8
Merge: 7c39a47852dedd3d635b
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 10:52:59 2017 -0400
Forward port #695
Merge branch 'master' into hapi3_refactor
commit 7c39a47852
Merge: e0ffb84d216efafe62f1
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 09:53:17 2017 -0400
Forward port #688
Merge branch 'master' into hapi3_refactor
commit e0ffb84d21
Merge: 52388c11c1d19b00ff09
Author: James <jamesagnew@gmail.com>
Date: Sat Aug 12 14:59:46 2017 -0400
Merge branch 'master' into hapi3_refactor
commit 52388c11c1
Author: James <jamesagnew@gmail.com>
Date: Sat Aug 12 06:21:46 2017 -0400
Cleanup
commit 5413b276af
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Aug 10 11:36:25 2017 -0400
Work on graph QL support
commit 209752cd63
Author: James <jamesagnew@gmail.com>
Date: Thu Aug 10 11:18:19 2017 -0400
Fix tests
commit 4543408dc8
Author: James <jamesagnew@gmail.com>
Date: Sat Aug 5 06:55:50 2017 -0400
Fix a potential deadlock
commit ee360f5376
Author: James <jamesagnew@gmail.com>
Date: Sat Aug 5 06:22:06 2017 -0400
Add R4 code to CLI
commit 1a95ba3b65
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Aug 3 06:14:01 2017 -0400
More cleanup
commit f0d8802681
Author: James <jamesagnew@gmail.com>
Date: Wed Aug 2 11:27:43 2017 -0400
Tests are working!
commit a4cbda357e
Author: James Agnew <jamesagnew@gmail.com>
Date: Wed Aug 2 10:42:04 2017 -0400
Connection handling cleanup for new tests
commit 0e2cecfbd0
Author: James Agnew <jamesagnew@gmail.com>
Date: Wed Aug 2 10:16:28 2017 -0400
Clean up R4 JPA tests
commit 40317a650d
Author: James <jamesagnew@gmail.com>
Date: Wed Aug 2 09:12:38 2017 -0400
Work on R4 for JPA server
commit e7f8f8c30d
Author: James <jamesagnew@gmail.com>
Date: Tue Aug 1 20:43:47 2017 -0400
More work on porting tests
commit 43c9003258
Author: James <jamesagnew@gmail.com>
Date: Tue Aug 1 07:09:29 2017 -0400
Work on porting DSTU1 tests
commit 602857f1e2
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 31 22:34:08 2017 -0400
More work on bring unit tests up to date
commit e326a7b0cd
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 31 17:36:38 2017 -0400
Credit for #686 and forward port the fix to R4 validator
commit 96543c3992
Merge: 3fb75aa61a9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 31 17:12:33 2017 -0400
Merge branch 'master' into hapi3_refactor
commit 3fb75aa61a
Author: James <jamesagnew@gmail.com>
Date: Mon Jul 31 15:21:30 2017 -0400
More work on cleanup
commit b02fbb6804
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 22:11:07 2017 -0400
Work on porting STU1 tests
commit 1ae37b0db3
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 20:56:10 2017 -0400
Try to get coverage report working
commit 72b88849b3
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 20:27:02 2017 -0400
Fix android tests
commit e5f6c35aea
Author: James <jamesagnew@gmail.com>
Date: Sun Jul 30 19:31:18 2017 -0400
More work on getting legacy code cleaned up
commit 0b513b0845
Author: James <jamesagnew@gmail.com>
Date: Sun Jul 30 18:41:13 2017 -0400
Continue work on removing deprecated API
commit defea69aa3
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 17:10:01 2017 -0400
More cleanup of legacy code
commit 9ae7295705
Author: James <jamesagnew@gmail.com>
Date: Sun Jul 30 07:11:45 2017 -0400
More cleanup of legacy code
commit ebd3eeb5ee
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 06:43:25 2017 -0400
More work on removing legacy code
commit 92224c2532
Author: James <jamesagnew@gmail.com>
Date: Sat Jul 29 18:44:06 2017 -0400
Remove DSTU1 Bundle
commit c52cacf71b
Author: James <jamesagnew@gmail.com>
Date: Sat Jul 29 14:27:42 2017 -0400
Now compiling
commit b405e51773
Merge: c3ddf04e25cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Jul 28 06:21:02 2017 -0400
Merge branch 'master' into hapi3_refactor
commit c3ddf04e25
Author: James <jamesagnew@gmail.com>
Date: Thu Jul 27 11:06:06 2017 -0400
Sync R4 releases in
commit b13333c3c0
Author: James <jamesagnew@gmail.com>
Date: Fri Jul 14 05:52:33 2017 -0400
JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.
commit 2e60ff7521
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 13 20:02:46 2017 -0400
Fix imports
commit a92ace2e0d
Merge: 3196db96d11a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 13 12:02:27 2017 -0400
Merge branch 'master' into hapi3_refactor
commit 3196db96d1
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 13 11:48:10 2017 -0400
Don't add false paging link to request
commit bd4e1d3388
Author: James <jamesagnew@gmail.com>
Date: Sun Jul 9 21:32:16 2017 -0400
Finally building correctly!
commit 6464ce9304
Author: James <jamesagnew@gmail.com>
Date: Sun Jul 9 16:38:28 2017 -0400
Work on refactor
commit 0059f2e48e
Author: James <jamesagnew@gmail.com>
Date: Sat Jul 8 07:16:20 2017 -0400
Keep working on refactor
commit 6c2e87e8cc
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 6 22:35:13 2017 -0400
Lots of work on refactor
commit 11cab97504
Merge: 34ec6b88076c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 6 21:43:57 2017 -0400
Merge branch 'master' into hapi3_refactor
commit 34ec6b8807
Merge: f8e647511bc520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 6 21:43:49 2017 -0400
Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor
commit f8e647511b
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Jul 6 18:46:55 2017 -0400
Work on hapi3 changes
commit c520e60ac1
Author: James <jamesagnew@gmail.com>
Date: Wed Jul 5 08:08:40 2017 -0400
Keep working on refactor
commit f1d2ee9092
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 3 22:10:59 2017 -0400
Continue refactor for HAPI 3
commit 9281ccafc3
Merge: ea1264cd8e294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 3 20:34:16 2017 -0400
Merge branch 'master' into hapi3_refactor
commit ea1264cd8e
Author: James <jamesagnew@gmail.com>
Date: Wed Jun 28 10:26:01 2017 -0400
Continue work on refactor
commit fbe2f98a02
Merge: b2bef471000a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date: Wed Jun 28 06:21:22 2017 -0400
Merge branch 'master' into hapi3_refactor
commit b2bef47100
Author: James <jamesagnew@gmail.com>
Date: Tue Jun 27 21:13:23 2017 -0400
Work on refactor
commit 8f76e4e463
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jun 25 21:55:35 2017 -0400
Lots of work on refactoring
jamesagnew
ianmarshall
Gary Graham
Ken Stevens
jvi
Stig Rohde Døssing
Ken Stevens
Ken Stevens
Diederik Muylwyk
patrick-werner