honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity
8,063 Commits 682 Branches 131 Tags 1.2 GiB
Commit Graph

79 Commits

Author SHA1 Message Date
James Agnew dc627dc019
Add bulk export authorization layer (#2712) 
* Add bulk export authorization layer

* Add docs

* Version bump

* Authorize any

* Add bulk export - all

* Address lgtm issue
 2021-06-06 20:47:43 -04:00
jamesagnew ff2698d4d1 Merge branch 'rel_5_4' 2021-05-19 09:22:11 -04:00
jamesagnew de56f440cb Version bump 2021-05-18 17:14:14 -04:00
jamesagnew 2068372998 Version bump 2021-05-07 17:43:54 -04:00
jamesagnew 63c4b22cd3 Undo bump 2021-05-07 17:42:50 -04:00
jamesagnew 17e41520a4 Version bump 2021-05-07 17:41:39 -04:00
Ken Stevens a4856bba17
fix iBundleProvider.getResources(from,to) throwing a NPE (#2632) 
* fix iBundleProvider.getResources(from,to) throwing a NPE

* change log

* review feedback

* rename test to IT that has concurrency failures
 2021-05-05 21:50:51 -04:00
James Agnew 970a9884f0
Avoid tag definition constraint (#2620) 
* Avoid tag definition constraint failure

* Version bumps

* Add changelog

* Avoid guava issue

* Test fix

* Test fix

* Bump pom
 2021-05-01 17:16:15 -04:00
James Agnew 95d7ba6fa8
Streamline Search SQLs (#2576) 
* Streamline SQL queries

* SQL query tidying

* Add changelog

* Test fixes

* Tests passing

* Ongoing work

* Test fixes

* Test fixes

* Build fix

* Cleanup

* Fixes
 2021-04-28 10:29:09 -04:00
James Agnew 2ba1005762
OpenAPI Support (#2560) 
* Start work on OpenAPI

* Fixes

* Work on OpenAPI

* Cleanup

* Cleanup

* More swagger work

* Build fix

* More work

* More work

* Add documentation

* Docs fixes

* Add changelog

* License updates

* Add API

* Cleanup

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_plain/openapi.md

Co-authored-by: patrick-vachon-smilecdr <81274188+patrick-vachon-smilecdr@users.noreply.github.com>

* Work on scripts

* Add docs

* Compile fix

* Work on fixes

* Fix tests

* Test fix

* Test fix

* Build fix

* Tests

* Build fix

* Work on pipeline

* Version bump

* Test fix

* Version bump

* Test fix attempts

* Test fix

* Test fix

* Remove accidentally committed files

* Fixes

* Tets fixes

* Test fix

* Test fix

* Test fix

* Test fixes

* Test fixes

* Test fixes

* License header updates

* test fix

* Test fixes

* Test fix

* Test fixes

* Test fix

* Checkstyle bump

Co-authored-by: patrick-vachon-smilecdr <81274188+patrick-vachon-smilecdr@users.noreply.github.com>
 2021-04-25 15:40:50 -04:00
Nick Goupinets 4e266462ec Bumped up version due to breaking changes 2021-04-20 16:17:27 -04:00
Nick Goupinets 1f10a15c35 Merge branch 'master' into 2515_MDM_survivorship_rules 2021-04-19 17:33:53 -04:00
James Agnew ca2088f3ad
Add framework for Bulk Import (#2538) 
* Start work on bul;k import

* Work on bulk import

* Have batch working

* Working

* Working

* More work

* More work on bulk export

* Address fixmes

* License header updates

* Test fixes

* License header updates

* Test fix

* Test fix

* Version bumps

* Work on config

* Test cleanup

* One more version bump

* Version bump

* CLeanup

* A few additions

* Test fixes

* Test fix

* Test fix

* Migration fix

* Test fix

* Test fix
 2021-04-14 17:41:32 -04:00
Tadgh 99e10de5fb
Merge pull request #2487 from hapifhir/mdm-expansion-interceptor 
MDM Expansion Interceptor (poc)
 2021-04-09 11:23:04 -04:00
James Agnew a6cbf7eebd
Add support for hierarchycal valueset expansion (#2525) 
* Add support for hierarchycal valueset expansion

* Add changelog

* Add tests

* Cleanup

* Test fix

* Test fixes
 2021-04-06 17:36:54 -04:00
James Agnew b617c7690d
Search Parameter Infrastructure Cleanup (#2522) 
* Search param service cleanup

* Work on collapsing search param

* Search param cleanup

* Work on build

* Test fix

* Test fixes

* Ongoing work

* Test fix

* Compile fix

* Test fixes

* Test fix

* Test fix

* License header updates

* Remove fixme

* Cleanup

* Cleanup
 2021-04-05 17:40:10 -04:00
Nick Goupinets d05b585426 Added a test for survivorship svc invocation 2021-04-01 19:38:53 -04:00
Nick Goupinets 9629aceff0 Removed obsolete test and added more control to replace fields in TU 2021-04-01 15:52:52 -04:00
Nick Goupinets 6b4d6702c1 Merge branch 'master' into 2515_MDM_survivorship_rules 2021-03-31 16:07:45 -04:00
Nick Goupinets ab8505dfc4 Removed deprecated TerserUtil 2021-03-31 16:07:21 -04:00
Tadgh 74be6761b1 Merge remote-tracking branch 'origin/master' into mdm-expansion-interceptor 2021-03-31 09:47:57 -04:00
Tadgh 007ce8fc6f add a test forthe case where there are no mdm links 2021-03-30 23:40:20 -04:00
Tadgh 8b69d161bd Update docs 2021-03-30 17:12:55 -04:00
Tadgh 419a5829ea This shockingly works 2021-03-30 12:39:37 -04:00
James Agnew 049097e5b4
Improve CapabilityStatement Generation (#2511) 
* Start work

* Work on testing

* Version bump

* Test fix

* Compile fix

* Test Fixes

* Test fix

* Test fix

* Compile fix

* Tst fix

* Test fix

* Test fix

* Test fix
 2021-03-30 05:48:03 -04:00
Tadgh a15ded7140 Interceptor now correctly intercepts at the right point 2021-03-29 21:12:03 -04:00
Nick Goupinets 7a9514b94a Initial fix 2021-03-29 20:43:43 -04:00
Tadgh ab143e34cb Merge remote-tracking branch 'origin/master' into mdm-expansion-interceptor 2021-03-29 19:27:37 -04:00
Diederik Muylwyk b720c32c1d Version bump 2021-03-29 18:23:16 -04:00
Tadgh 9f13225aa5 WIP interceptor using reference param modifier 2021-03-26 17:57:38 -04:00
Tadgh e6cfb77c79 Wip 2021-03-23 18:11:39 -04:00
James Agnew dc41d5ad61
Add terminology mapping and display population interceptors (#2488) 
* Start work on code mapping interceptors

* Work on generation

* Add terminology mapping and display population interceptors

* Add changelog

* License header updates

* Test fixes

* Fix typo

* Interceptor fixes

* License header update

* Test fixes

* Mapping fixes

* Version bump

* License header updates

* Add null tests

* Add null guard

* Intermittent fix
 2021-03-21 12:03:57 -04:00
Tadgh 6226ae02d5 Add basic skeleton of MDM expansion 2021-03-18 23:16:45 -04:00
James Agnew 3eda19c65a
Version bump (#2400) 
* Version bump

* Docs changes

* Docs tweaks

* Docs tweak

* Spelling fixes

* Docs tweaks
 2021-02-18 11:07:49 -05:00
jamesagnew 919c1dbddc Version bump to 5.3.0 2021-02-17 07:10:13 -05:00
Nick Goupinets c5342c116f Fixed orphaned channel setup 2021-02-12 14:06:44 -05:00
Tadgh 96b4e5ab38
Merge pull request #2324 from hapifhir/single-threading-mdm 
Ensure Single threading mdm
 2021-01-29 10:01:56 -05:00
Tadgh c572575412 Remove mutator 2021-01-25 09:55:31 -05:00
Tadgh aa37884b2e Worked on #2317, force single consumer 2021-01-25 09:51:50 -05:00
Nick 82e52750e7 Merge branch 'master' into ng_20201218_survivorship_poc 2021-01-21 09:00:28 -05:00
jamesagnew 078a94f1a6 Fix nonnull annotations 2021-01-21 08:47:44 -05:00
Nick f8c1591d21 post CDR review fixes 2021-01-20 16:44:48 -05:00
Nick 0cb6d56348 Code review followup 2021-01-19 11:33:39 -05:00
Nick f10785ed43 Code review updates 2021-01-15 14:07:14 -05:00
Nick 6cc40b134e Pre-review commit 2021-01-14 20:35:09 -05:00
Nick 759f06ce48 Added optional manual override to link update 2021-01-14 14:24:59 -05:00
Nick 8a5651093b Renamed method param 2021-01-14 11:16:17 -05:00
Nick 07be675484 Reverted active flag check on golden resource 2021-01-14 11:10:34 -05:00
Nick e6f484cefd Added tests 2021-01-14 10:52:28 -05:00
Nick 6781718702 Survivorship 7 2021-01-12 19:08:54 -05:00