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hapi-fhir
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8119 Commits

Author SHA1 Message Date
Tuomo Ala-Vannesluoma fbca9f8060
Offset query fixes (#2579) 
* Fix new searchbuilder limit similar to legacy searchbuilder

* Fix returning includes when using offset query

* Add unit tests for offset query with include

* Only use count param if offset is given (sometimes we want to search synchronously more if DAO is used directly)

* Throw if offset is tried to use with everything operations

* Do not offer offset paging for everything operations and fix tests to assert that
 2021-04-30 19:01:27 -04:00
Kevin Hartmann e8ac24b4df Test now passes. 2021-04-30 15:17:22 -04:00
Kevin Hartmann b3afe41de8 Added test to make sure we have loaded the expected package id. 2021-04-30 15:14:19 -04:00
James Agnew 292b350f2c
Bump Junit for to avoid OWASP flag (#2618) 2021-04-30 14:39:16 -04:00
Tadgh 983d811af6
Merge pull request #2587 from hapifhir/issue-2585-enhance-placeholder-targets-logic 
Issue 2585 enhance placeholder targets logic
 2021-04-30 12:55:27 -04:00
Nick Goupinets d14807b8c7
Merge pull request #2567 from hapifhir/2566_update_s13n_and_validation_handling 
Update s13n and validation handling
 2021-04-30 11:29:04 -04:00
Tadgh 42109e8a4a Add changelog 2021-04-29 18:31:10 -04:00
Nick Goupinets 8cde076f1e Merge branch 'master' into 2566_update_s13n_and_validation_handling 2021-04-29 17:25:32 -04:00
Nick Goupinets 896c8fbd4f Code review 2021-04-29 17:25:06 -04:00
Tadgh ac7c684437 Refactor to support all new tests 2021-04-29 17:01:19 -04:00
Tadgh 78271a2931 Create tests for all possiblye use cases 2021-04-29 15:25:11 -04:00
Kevin Dougan SmileCDR 646faa10e1
2540 - Upgraded the fhir_core_version from 5.3.0 to 5.3.10 (#2545) 
* 2540 - Upgraded the fhir_core_version from 5.3.0 to 5.3.9.

* 2540 - Updated the Unit Test messages due to the upgraded dependencies.

* 2540 - Fixed some additional Unit Test message checks.

* 2540 - Updated the POM to refer to fhir_core_version 5.3.10-SNAPSHOT so a FULL Pipeline Build can run to verify that everything is fixed now.

* 2540 - Added some DEBUG Sysout logging to try and determine why the Pipeline Builds fail for a specific Unit Test when it passes locally...

* 2540 - Added some more logging to try and determine why the Pipeline Builds fail for a specific Unit Test when it passes locally...

* 2540 - Updated a Unit Test to account for a newly returned search param.

* 2540 - Updated a Unit Test to account for a newly returned search param and removed some debug output.
 2021-04-29 15:00:37 -04:00
JP 239d2496ea
CQL hardening and Dstu3 unit tests (#2450) 
* WIP for elm caching

* Bug fixes and a working DSTU3 unit test

* More tests, Address review feedback, add initial docs

* Update to cql-evaluator 1.2.0

* Fixes for documentation
 2021-04-29 14:52:13 -04:00
Tadgh 3ff2ad37ff Start with failing test 2021-04-29 14:08:50 -04:00
Nick Goupinets d67537231c Merge branch 'master' into 2566_update_s13n_and_validation_handling 2021-04-29 13:55:48 -04:00
Nick Goupinets d45972abed Added geo accuracy code 2021-04-29 11:46:09 -04:00
Tadgh fc1cef24ae
Merge pull request #2584 from hapifhir/whitesource/configure 
Configure WhiteSource Bolt for GitHub
 2021-04-29 09:47:48 -04:00
whitesource-bolt-for-github[bot] 7c3ce4147f
Add .whitesource configuration file 2021-04-29 13:42:31 +00:00
Nick Goupinets 4050c42bf4 Treating C addresses as valid 2021-04-28 15:31:34 -04:00
Nick Goupinets ae1c26afea Updated docs 2021-04-28 10:45:15 -04:00
James Agnew 95d7ba6fa8
Streamline Search SQLs (#2576) 
* Streamline SQL queries

* SQL query tidying

* Add changelog

* Test fixes

* Tests passing

* Ongoing work

* Test fixes

* Test fixes

* Build fix

* Cleanup

* Fixes
 2021-04-28 10:29:09 -04:00
Nick Goupinets 21d8cdfefc Merge branch 'master' into 2566_update_s13n_and_validation_handling 2021-04-28 10:16:27 -04:00
Nick Goupinets 418c1aa2c6 Added avc code to the interceptors 2021-04-28 10:15:38 -04:00
KevinIsAProgrammer dd61a8aa2c
Merge pull request #2575 from hapifhir/kh_2526_Add_Operation_Section_to_Conformance_Statements_resource_section 
Kh 2526 add operation section to conformance statements resource section
 2021-04-27 22:47:30 -04:00
Tadgh ac1d4e3e4f
Merge pull request #2542 from hapifhir/issue-2534-new-tx-pointcut 
Add new pointcut for transaction processing completed.
 2021-04-27 18:42:19 -04:00
Nick Goupinets a1604c95c9 Updated address validating logic 2021-04-27 18:27:38 -04:00
Kevin Hartmann b9151a4a75 Added Changelog. 2021-04-27 16:34:24 -04:00
Tadgh 10b83a69d0 Remove elastic bump as HS relies on it 2021-04-27 15:58:48 -04:00
Kevin Hartmann 4a5b62616c Improved assertions for testBulkDataExport() 2021-04-27 15:01:03 -04:00
Nick Goupinets 7cef07b0c1 Improved test coverage 2021-04-27 11:47:57 -04:00
Nick Goupinets 29722ad8ec Fixed exception handling 2021-04-27 10:14:30 -04:00
Nick Goupinets 024f553fc9 Merge branch 'master' into 2566_update_s13n_and_validation_handling 2021-04-27 09:31:42 -04:00
Kevin Hartmann 334ce0e049 Merge remote-tracking branch 'origin/master' into kh_2526_Add_Operation_Section_to_Conformance_Statements_resource_section 2021-04-27 09:29:53 -04:00
Nick Goupinets 82bf8cdc9d Code review updates 2021-04-27 09:29:08 -04:00
jamesagnew 00a37deb08 Credit for #2384 2021-04-27 08:43:25 -04:00
Jari Maijenburg 348198e7af
Made unknown operation exception return an OperationOutcome with issue code "not-supported" (#2384) 2021-04-27 08:39:17 -04:00
jamesagnew 1d054054c7 Test fixes 2021-04-27 07:03:24 -04:00
Tadgh a5e734fec8 Handle sorting entries which contain no resources 2021-04-26 22:24:47 -04:00
Kevin Hartmann 3a901a6671 Cleaned up extra logging. 2021-04-26 16:57:13 -04:00
Kevin Hartmann 2f126a8d9f Merge branch 'master' into kh_2526_Add_Operation_Section_to_Conformance_Statements_resource_section 2021-04-26 16:53:19 -04:00
Nick Goupinets 08934d2364 Updated standardization logic and removed obsolete validator 2021-04-26 16:27:44 -04:00
Tadgh 798e960bb8 Merge remote-tracking branch 'origin/master' into issue-2534-new-tx-pointcut 2021-04-26 15:26:34 -04:00
Kevin Hartmann bb9c7a43e7 Added test to to verify operation section was added to Conformance Statement; Jame's changes to the Conformance Statement code have already made it pass, so no more code changes are necessary. :-) 2021-04-26 14:32:58 -04:00
Nick Goupinets 9e153ddbcd Updated docs 2021-04-26 14:26:21 -04:00
Nick Goupinets f6ed93b343 Updated validation logic 2021-04-26 14:17:05 -04:00
Kevin Dougan SmileCDR 0246e7dd0e
2572 - Add master Branch changes related to backport of fix for #2171… (#2574) 
* 2572 - Add master Branch changes related to backport of fix for #2171 for new 5.3.3 release.

* 2572 - Added some missing changelog folders for the v5.3.1 and v5.3.2 releases.

* 2572 - Added a missing backport changelog entry for the v5.3.1 release.

* 2572 - Added a missing VersionEnum entry for the V5_3_1 release.
 2021-04-26 14:13:42 -04:00
Tadgh 3adc259348 Productioninizg 2021-04-26 14:08:20 -04:00
Tadgh b007fecb1d Add comment 2021-04-26 13:40:40 -04:00
Tadgh 9ecb390dae Move tests to proper class. Fix issue with version referencing 2021-04-26 13:40:11 -04:00
Tadgh 0b8132b1a2 Bump elastic version 2021-04-26 11:04:39 -04:00