James Agnew
ba4bb005bc
Switch JPA unit tests to use H2 ( #1381 )
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* Start working on this
* Ongoing fixes to H2 branch
* Work on fixing tests
* Updated fixes
* Some test fixes
* More work on H2 migration
* Fixes to try and get the H2 migration building
* Test seem to be passing!
* Tweaks to locale randomization
* Add changelog
2019-07-13 17:22:43 -04:00
Ken Stevens
8d817b364c
Merge remote-tracking branch 'remotes/origin/master' into expunge-hooks
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# Conflicts:
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/expunge/ExpungeEverythingService.java
2019-07-12 13:27:11 -04:00
jamesagnew
a5a9950e77
License header updates
2019-07-12 08:52:47 -04:00
James Agnew
afd2b35ff6
Fix an intermittent test failure
2019-07-12 06:32:18 -04:00
James Agnew
1db019b6df
Test fix and try to get Travis building again
2019-07-11 20:20:27 -04:00
Diederik Muylwyk
62e1b7e9ea
Fixing minor overlooked change from recent pull request.
2019-07-11 17:07:26 -04:00
Diederik Muylwyk
0729e38e6e
Resolve "experimental implementation for storing expanded ValueSets in terminology tables" ( #1369 )
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* Added experimental implementation for storing expanded ValueSets in terminology tables.
* Minor tweak to log message for consistency.
* Another minor tweak to log message for consistency.
* Renamed test.
* Addressing review comments.
* Added migration tasks.
2019-07-11 16:52:19 -04:00
Ken Stevens
7aaa75c255
fixed pointcut
2019-07-10 10:09:43 -04:00
Ken Stevens
5e05703c1a
Add expunge-everything hook. Also add RequestDetails to all expunge operations
2019-07-09 10:58:57 -04:00
jamesagnew
9fcbdb0cdc
License header updates
2019-07-07 14:41:57 -04:00
James Agnew
6c221efaf6
More test fixes
2019-07-07 14:09:55 -04:00
James Agnew
d00304d706
More test fixes
2019-07-07 13:35:39 -04:00
James Agnew
34f7d4ddbd
Refactor ServerConformanceProvider so that it no longer keeps any state
2019-07-07 12:57:31 -04:00
James Agnew
4bd60a8447
Roll back one dependency
2019-07-07 11:02:08 -04:00
James Agnew
1c7c83cd8e
Add an isEmpty() method to IBundleProvider
2019-07-05 16:16:39 -04:00
jamesagnew
dff2fdd3cf
GET RID OF TRAILING LICENSE HEADER SPACES ONCE AND FOR ALL
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YESSSSSSSSSSSSS
2019-07-05 11:19:51 -04:00
James Agnew
4a0bc27602
Test fix
2019-07-05 09:37:48 -04:00
James Agnew
2a473d1825
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-07-05 09:03:23 -04:00
James Agnew
2a6436af23
Rename columns in code mapping
2019-07-05 09:03:03 -04:00
jamesagnew
aff88d3ebb
License header updates
2019-07-05 07:27:18 -04:00
James Agnew
6e20b53979
Fix a crash in R4 validation
2019-07-04 16:27:04 -04:00
James Agnew
4f7d4aa8d2
Two test fixes
2019-07-04 09:54:26 -04:00
James Agnew
886f3f442b
Moving testloggingutil into test utilities
2019-07-04 09:00:30 -04:00
James Agnew
f1848fb1ad
Include version ID in response for deleted resource
2019-07-03 14:44:12 -04:00
James Agnew
56aaef641c
Add request ID
2019-07-02 21:32:28 -04:00
James Agnew
1faf7785c4
Dont filter constraints from the event broadcast - this was not needed
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after all
2019-07-02 09:21:15 -04:00
jamesagnew
7b7136e3ab
Ensure test coverage of JPA entities
2019-07-02 08:37:48 -04:00
jamesagnew
491776a7b8
Fixes to cascading delete
2019-07-02 05:41:38 -04:00
jamesagnew
742389642d
Add tests for delete conflicts and authorizationinterceptor
2019-07-01 10:49:38 -04:00
jamesagnew
ccf491b3ae
Add parent pom to BOM
2019-06-29 13:50:43 -04:00
James Agnew
1fd99dac63
Enable optional cascading deletes on JPA server ( #1363 )
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* Start working on cascading deleets
* WOrk on cascading deletes
* Work on cascading deletes
* Enable cascading deletes
* Cascade deletes almost working
* FIx test
* Test fix
2019-06-28 17:32:39 -04:00
Joel Schneider
5c55133275
quick hack to pass unit test (handle files located in subdirectories of zipfile)
2019-06-28 15:11:16 -04:00
Joel Schneider
557c9b66c2
add TerminologyLoaderSvcImgthlaTest
2019-06-28 15:11:16 -04:00
Joel Schneider
5d113c2e8b
Remove allele_id property. (If needed, a CodeSystem supplement could define it. Defining a separate allele_id CodeSystem, and related ConceptMap, may also be a reasonable option.) Trying to keep the list of concept properties as straightforward as possible for now.
2019-06-28 15:11:16 -04:00
Joel Schneider
1f5cbc36b3
add stub for HLA nomenclature terminology upload
2019-06-28 15:11:16 -04:00
jamesagnew
5910131319
License header updates
2019-06-27 18:23:45 -04:00
James Agnew
10d969c514
Add Consent Service ( #1359 )
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* Initial consent svc
* Ongoing consent svc work
* Add docs
* Ongoing consent service work
* Work on consent service
* More work on consent svc
* License header updates
* Ongoing consent svc work
* Some test fixes
* Some test fixes
* More work on consent svc
* Tests working
* Test fix
* Propagate RequestDetails to everything in JPA server
* More interceptor tweaks
* Fix compile error
* One more tweak to captured SQL
* Ongoing interceptor tweaks
* Ongoing interceptor tweaks
* More interceptor tweaks
* Interceptor tweaks
* Tweaks to tests
* Fix tests
* Test fix
* Raise warnings when encoding extensions with missing values
* Consent service work
* More interceptor tweaks
* Consent interceptor tweaks
* Add logging to test
2019-06-27 16:35:29 -04:00
James Agnew
2bfbea4e6b
Remove duplicate test class
2019-06-26 09:24:36 -04:00
James Agnew
ce0c84db03
JPA server can't use OR list on _tag:not ( #1362 )
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* Add a failing test for :not tags
* Add changelog and fix issue
2019-06-26 08:44:56 -04:00
jamesagnew
e76b1dacb3
License header updates
2019-06-22 18:31:16 -04:00
jamesagnew
8bb010bb18
Test fixes
2019-06-22 17:42:02 -04:00
jamesagnew
3ba194acbe
Reject subscriptions in JPA server if status field is not set
2019-06-22 17:03:22 -04:00
jamesagnew
0fbde2a4e5
Fix #1352 - Don't fail to create observation with a value type of
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SampledData
2019-06-22 16:43:25 -04:00
James Agnew
4ad1808da3
Propagate RequestDetails to everything in JPA server ( #1358 )
2019-06-22 15:18:06 -05:00
jamesagnew
58e6b7f6aa
Fix #1011 - Was resolved in #1355
2019-06-22 16:03:35 -04:00
jamesagnew
989e26fdb4
Fix #1355 - Failed to call access method: java.lang.NullPointerException in case of bundle entry without resource
2019-06-22 15:51:56 -04:00
James Agnew
2543f27697
Add a test
2019-06-21 15:38:16 -04:00
Diederik Muylwyk
266384b536
Evaluation of PartTypeName in LoincRsnaPlaybookHandler is not case insensitive.
2019-06-21 15:36:51 -04:00
jamesagnew
9e9be00088
License eader updates
2019-06-17 21:59:03 -04:00
James Agnew
6724fd0348
Implement the $subsumes operation ( #1344 )
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* Implement the $subsumes operation
* Fix #976
2019-06-17 17:31:24 -04:00