Commit Graph

956 Commits

Author SHA1 Message Date
James Agnew 97e6073665 Support URI (and prepare for lat/lon search params) in JPA server, and
don't store duplicate tags
2015-09-01 17:02:35 -04:00
de Beaubien, Bill bac4c4a2e9 Fix #214 - added totalResults to the hash of valid dstu1 keywords 2015-09-01 09:58:25 -04:00
jamesagnew f04147dcfd Fix compile problem 2015-09-01 07:07:45 -04:00
jamesagnew e8f5451cc9 Fix a few issues found by FindBugs 2015-09-01 07:05:27 -04:00
James Agnew 08b19f55ad Merge pull request #213 from SingingTree/javadocs_reference_github
Update Javadocs to reference Github docs
2015-08-31 16:18:38 -04:00
jamesagnew a9f978a8a2 Udate to latest DSTU2 definitions 2015-08-31 08:20:24 -04:00
Bryce Van Dyk eb7b405419 Update Javadocs to reference Github docs
Several Javadoc comments still reference the old Sourceforge based
documentation. These have been updated to point to the Github based
documentation where relevant, or removed in one case where the Github docs
do not appear to have such a section.
2015-08-31 18:46:05 +12:00
James Agnew 98a0d5a07a Delete old deprecated classes 2015-08-28 18:19:16 -04:00
James Agnew eaa2519696 iAdd some tests 2015-08-28 18:00:32 -04:00
James Agnew 110abf7cb2 Switch from Cobertura to JaCoCo 2015-08-28 17:06:56 -04:00
James Agnew bd13b53099 Fix #212 - Dont accept invalid IDs but do accept IDs starting with a
number
2015-08-28 15:36:56 -04:00
jamesagnew 073fa47807 Add support for _include:recurse behaviour 2015-08-27 19:44:51 -04:00
James Agnew 1577859340 Fix build 2015-08-24 18:46:07 -04:00
James Agnew 2733812535 Fix build 2015-08-24 18:39:49 -04:00
James Agnew 11c5ab7892 More auto qualify resource references 2015-08-24 18:33:28 -04:00
James Agnew 83a57f8e7c Auto qualify resource IDs 2015-08-24 18:21:34 -04:00
miantorno a5a18b9a14 DateTimeDt now returns an instance of itself when the TimeZone is set. 2015-08-24 16:48:00 -04:00
James Agnew df4d371edc Add profile and security params for generic search 2015-08-24 15:23:28 -04:00
jamesagnew bec43b3fdc Fix tests 2015-08-24 08:29:02 -04:00
jamesagnew 60339d6f93 Fix #209 - _revinclude results from JPA server should have a Bundle.entry.search.mode of "include" and not "match". Thanks to Josh Mandel for reporting! 2015-08-23 22:25:25 -04:00
jamesagnew 11376024fa Fixing test related to summary and elements mode 2015-08-23 21:51:46 -04:00
jamesagnew 44ac164eca Work on #125 - Support _summary and _elements 2015-08-23 13:29:57 -04:00
James Agnew 7645c240f4 Get instance validator working across FHIR versions 2015-08-20 15:27:24 -04:00
James Agnew ddc66d3ed0 Add support for $validate-code in JPA server 2015-08-20 14:27:19 -04:00
James Agnew 11f5aeebd9 Clean up the build and hopefully close #206 2015-08-19 11:49:00 -04:00
jamesagnew 6941f92090 Fix #207 - Confusing error message parsing invalid contained resources 2015-08-17 20:46:56 -04:00
James Agnew c2fba2ce21 More work on interceptors 2015-08-17 18:35:51 -04:00
James Agnew bb1e8b9ddd Last commit broke cobertura 2015-08-17 15:54:00 -04:00
jamesagnew ac564a54d6 Documentation cleanup 2015-08-17 07:57:20 -04:00
jamesagnew 330dbde983 Add new interceptor hook for auditing 2015-08-16 22:09:01 -04:00
James Agnew 89a7750bf4 Start working on action interceptor framework 2015-08-14 17:05:07 -04:00
James Agnew c859c9da91 Add withId(long) to fluent client read() method 2015-08-14 15:43:35 -04:00
James Agnew 2766af2693 Update definitions and correctly handle exceptions in
incomingRequestPreProcessed method in server interceptors
2015-08-13 16:59:10 -04:00
jamesagnew b28dba3540 Merge branch 'dstu2_final' of github.com:jamesagnew/hapi-fhir into dstu2_final 2015-08-09 17:20:30 -04:00
jamesagnew 12735a1446 Handle contact search params better 2015-08-09 17:17:53 -04:00
James Agnew 24634880db Update for QA version of DSTU2 2015-08-09 11:18:04 -04:00
James Agnew b36e4e5841 Merge branch 'master' into dstu2_final 2015-08-06 18:07:34 -04:00
James Agnew c838d651dd Fix fluent client search call so that it can be mocked with Mockito 2015-08-06 18:06:32 -04:00
James Agnew 43dd081098 Fix compile issues and keep working on android build 2015-08-06 13:13:03 -04:00
James Agnew af9c8faf89 Don't crash if resrouce references being parsed have unexpected child
elements
2015-08-06 10:50:36 -04:00
James Agnew 137a2cf7ec Enhancements to Android build 2015-08-06 10:15:58 -04:00
James Agnew 63defc2f30 Merge branch 'master' into dstu2_final 2015-08-05 13:29:20 -04:00
James Agnew fd91ce76ce Fix #192 - Correctly unescape search parameters in the server when they
have a trailing comma or an escaped backslash
2015-08-05 12:57:04 -04:00
James Agnew 5b09a3d2b6 Add trasnaction BATCH support to JPA 2015-07-31 09:29:25 -04:00
James Agnew d9d192cc04 Merge branch 'master' into dstu2_final 2015-07-30 22:34:45 -04:00
James Agnew ab2129d651 Implements support for _tag in JPA server and client 2015-07-30 07:47:37 -04:00
James Agnew 75798cf9fe Use HttpServletRequest.getContextPath to get the context path 2015-07-27 11:19:29 -04:00
jamesagnew e457366ffa Start work on upgrading DSTU2 to QA version 2015-07-25 11:56:47 -04:00
James Agnew f1d7fb7b8a Cleanup 2015-07-21 11:46:16 -04:00
James Agnew f2bf199ac7 Fix build and sync RI 2015-07-21 10:58:02 -04:00
James Agnew 56a4c1b04b Add serialization support and fix build regression 2015-07-21 09:45:53 -04:00
jamesagnew 48917684fd Finish off #152 2015-07-21 08:28:40 -04:00
jamesagnew 99e92d8fca Operations in server generated conformance statement should only appear once per name, since the name needs to be unique. 2015-07-19 19:17:39 -04:00
jamesagnew a774a654ce Property document OperationDefinitions generated automatically by server 2015-07-19 11:10:46 -04:00
jamesagnew a35d20b999 Fix #158 - Don't encode empty tags 2015-07-18 17:35:54 -04:00
jamesagnew 5a450227b2 Fix unit test issues 2015-07-18 17:05:10 -04:00
jamesagnew 3bff020c54 Add exception pre processing method to server interceptors 2015-07-18 16:31:32 -04:00
jamesagnew 626f4677e7 Fix #198 - Sorting should only sort on the individual parameter searched on, not all params of the same type 2015-07-18 15:29:24 -04:00
jamesagnew 57ee1fe220 Fix unit tests failing due to OperationDefinition changes 2015-07-18 14:43:59 -04:00
jamesagnew 41283d4ed4 Add $get-resource-counts operation to JPA server 2015-07-17 18:28:47 -04:00
jamesagnew ddbe79cb86 For #126 - Don't use BoundCodeableConcept for empty enums 2015-07-17 08:34:44 -04:00
jamesagnew 3bdf846a3d Improve error messages in JPA server 2015-07-16 22:47:41 -04:00
jamesagnew 2fc0d4c7a2 Clean up exception handling in server, and add QuestionnaireAnswers validation for JPA server 2015-07-16 20:16:51 -04:00
James Agnew 3bba0c0425 Add validation module for QuestionnaireAnswers 2015-07-15 17:28:12 -04:00
jamesagnew 818c40498c Site updates 2015-07-15 08:37:56 -04:00
James Agnew 901c5c29cf Version bunp for 1.2 2015-07-14 18:08:06 -04:00
James Agnew 3fa7c54526 Tag 1.1 release 2015-07-13 10:31:02 -04:00
James Agnew 350028be73 Implement meta operations in client 2015-07-10 17:36:55 -04:00
James Agnew c22aa14d29 Clean up the validation framework and integrate the QuestionnaireAnswers
validator
2015-07-10 16:05:40 -04:00
jamesagnew d5b99c2c10 Fix broken build 2015-07-08 22:27:49 -04:00
James Agnew 3bfecb27a8 Update RI structures 2015-07-08 17:57:53 -04:00
James Agnew 373859c36c Fix regression 2015-07-07 18:18:11 -04:00
James Agnew ad0c51f600 Rename DAO classes per request from Ismael Sarmento Jr 2015-07-07 17:41:59 -04:00
James Agnew d20b7e2c94 A few cleanups to allow example resources to commit cleanly 2015-07-07 17:27:10 -04:00
James Agnew 0f76ba81e1 Fix #196 - Support deep chained parameters in JPA. Also add support for
Prefer header.
2015-07-07 10:41:07 -04:00
jamesagnew 8a86ad5e76 Wide sweeping changes to get RI structures working in server mode 2015-07-05 17:14:15 -04:00
jamesagnew 8b65a9aedf Indicate support for conditional create/update/delete in DSTU2 server conformance statement 2015-06-25 22:22:19 -04:00
James Agnew af33664e7c Support _count on JPA search in transaction 2015-06-25 10:32:03 -04:00
James Agnew 75f5b47762 Doc cleanup 2015-06-24 17:42:46 -04:00
James Agnew dd9f80ecb1 Clean up warnings 2015-06-24 12:26:40 -04:00
jamesagnew da2d4d0497 Stlye issues only 2015-06-24 08:22:05 -04:00
jamesagnew fed9f4d61e Add unit tests and update healthconnex server 2015-06-23 08:29:13 -04:00
James Agnew 70d4abdf06 Server should include lastUpdated in search responses if one is supplied
by the implementation. Also automatically include in this in JPA server
2015-06-22 16:27:08 -04:00
jamesagnew 685fa6d164 Code and site cleanup 2015-06-21 22:10:13 -04:00
jamesagnew b48843a128 More work on test coverage 2015-06-21 12:16:33 -04:00
jamesagnew 591f16fa9d Fix cobertura 2015-06-21 00:56:23 -04:00
jamesagnew e9ac63688c Finally have travis and coveralls working! 2015-06-21 00:48:10 -04:00
jamesagnew 71fbfe5214 Add consolidated test package and clean up tests for cobertura 2015-06-20 14:23:34 -04:00
James Agnew e8c75c5a45 Add support for _lastUpdated parameter in client and JPA server 2015-06-19 17:46:14 -04:00
James Agnew 12f3cfcab8 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-18 17:49:54 -04:00
James Agnew 269106074d DSTU2 server should indicate conformance for transaction operation 2015-06-18 17:49:33 -04:00
jamesagnew d0cffbf8c7 Revert change to make IdDt#isLocal() return true if the base is "urn:". This caused all kinds of regressions and was obviously a bad idea. 2015-06-18 09:00:56 -04:00
jamesagnew 0f2d742872 Documentation updates 2015-06-17 19:56:57 -04:00
James Agnew 9cf2b18d5d Fix broken unit test 2015-06-17 16:17:16 -04:00
James Agnew a27acb9b79 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-17 14:32:42 -04:00
James Agnew 39dd48bc41 Automatically populate Bundle.entry.base when encoding a bunde 2015-06-17 14:32:11 -04:00
jamesagnew 1bde9ac5b3 Fully implement content type negotiation, and add checkstyle 2015-06-17 13:51:05 -04:00
James Agnew 6f7ef96b97 Support $validate operation correctly in DSTU2 clients and in testpage
overlay
2015-06-16 11:56:30 -04:00
jamesagnew 81bfc28147 Support $validate operatioh in DSTU2 client 2015-06-16 08:05:27 -04:00
jamesagnew 7086508ead Start working on DSTU2 support for testpage overlay 2015-06-15 08:33:18 -04:00
James Agnew 0cc53ca742 Documentation updates 2015-06-12 17:50:01 -04:00
James Agnew a46890b0d2 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-12 11:09:55 -04:00
James Agnew 9b280e0ab7 Remove dependency on servlet-api in client 2015-06-12 10:02:52 -04:00
jamesagnew 0479a48a41 Correctly handle Bundle.entry.base 2015-06-12 08:27:03 -04:00
James Agnew 6077114b32 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-11 14:24:58 -04:00
James Agnew f40955c2cb Remove dependency on ServletInputStream 2015-06-11 14:24:40 -04:00
jamesagnew 4ab8871a41 POM cleanup 2015-06-09 08:22:46 -04:00
jamesagnew fc4d2ae7e2 Work on conformance generation for operations 2015-06-04 22:23:57 -04:00
jamesagnew 4d9b2c6e8c Fix #175 - Correctly parse ™ 2015-06-04 20:24:47 -04:00
James Agnew f9a9232926 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-04 12:20:17 -04:00
James Agnew 62b0707b36 Support attributes longer than 512kb. 2015-06-04 12:19:10 -04:00
James Agnew 9b97fb0e97 Enable validation ($validate) operation in DSTU2 style 2015-06-04 10:56:13 -04:00
jamesagnew 8c3c8e215f Fix #178 - Allow links in Bundle.entry when parsing old Bundle in DSTU2 mode 2015-06-04 08:19:17 -04:00
jamesagnew e5b402cb14 Allow raw access to resource body in create/update/etc 2015-06-01 09:21:41 -04:00
jamesagnew 064f113133 Clean up resource parameter handling 2015-05-31 19:38:01 -04:00
jamesagnew 4a5e13b301 Work on synchronizing the HL7.org structures 2015-05-31 16:52:31 -04:00
James Agnew 3280375486 Fix $everything operation in generic client if the server returns JSON 2015-05-29 17:50:18 -04:00
jamesagnew 11d22b1b1f Site updates and clean up RI IdType 2015-05-28 08:35:49 -04:00
jamesagnew 834710df9b Work on #152 - Improved validation framework to enable failing if unexpected elements are found 2015-05-26 21:03:49 -04:00
jamesagnew e22f52ca44 Add paging methods to generic client for DSTU2 bundle 2015-05-25 07:59:06 -04:00
James Agnew ec3c94a823 Update RI structures 2015-05-22 17:32:36 -04:00
James Agnew ff6884223e Fix #170 - Better addXXX methods in structures. Also don't incorrectly
include IDs in client create requests, and add better getLink methods
to the bew Bundle resource structure.
2015-05-21 15:18:46 -04:00
James Agnew 30c7027616 Fix #149 - Use correct base URL on subsequent pages 2015-05-20 17:29:27 -04:00
James Agnew 0f9d4b8059 Add interceptor for syntax highlighting 2015-05-15 18:59:54 -04:00
James Agnew 7517709edb Fix #149 - Respect server address strategy for link-self on search
results
2015-05-15 17:51:06 -04:00
jamesagnew e9c09c6ba0 Encode meta element even if it only contains tags 2015-05-09 18:01:53 -04:00
James Agnew 2ce921f39b Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-08 18:59:00 -04:00
James Agnew 3e382ab760 More work on RI structs 2015-05-08 18:49:31 -04:00
James Agnew eeba5812cb Finalize 1.0 release 2015-05-08 17:15:50 -04:00
jamesagnew 0f2976358f Version bump to 1.1-SNAPSHOT with more loggging 2015-05-08 08:54:40 -04:00
jamesagnew a731557516 Merge branch 'hl7org_structs' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-07 21:28:31 -04:00
jamesagnew 8e81b069af Merge 2015-05-07 21:24:52 -04:00
jamesagnew dfbe2415d1 Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-07 21:24:34 -04:00
jamesagnew 924ebf062e Preparing for 1.0 release 2015-05-07 20:51:37 -04:00
James Agnew fcbe969967 Disable broken unit test in JPA server for now 2015-05-06 10:24:27 -04:00
James Agnew 3a5d2e892a About to commit to SVN as well 2015-05-05 18:16:22 -04:00
James Agnew 05cccdb6e5 More work on structs 2015-05-05 13:16:10 -04:00
James Agnew 496333b5e0 Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-04 11:08:37 -07:00
James Agnew 7585256037 Add some logging 2015-05-04 11:08:01 -07:00
James Agnew ab6cb24f5a Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-04 10:05:57 -07:00
James Agnew 0af3518772 Merge pull request #171 from joel-costigliola/master
Fix #169 - Add an exception for HTTP 403 Forbidden error
2015-05-04 10:04:27 -07:00
James Agnew ab7b1c3a4f Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-02 14:38:14 -07:00
James Agnew ae81ad29f6 Unit tests all passing 2015-05-02 14:04:43 -07:00
James Agnew aa2f2cee96 Merge branch 'hl7org_structs' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-01 13:52:24 -07:00
James Agnew 880ab84ce8 More work on structs 2015-05-01 12:27:56 -07:00
James Agnew 3fe60c3f1b Start syncing changes with SVN 2015-05-01 13:07:47 -04:00
James Agnew cb9716f885 More work to get build working 2015-05-01 11:44:06 -04:00
James Agnew 61f2838b3a More work getting unit tests passing 2015-05-01 11:16:41 -04:00
James Agnew 629bc5b7d3 HL7org unit tests all pass 2015-05-01 11:09:29 -04:00
James Agnew 9755ae8d35 Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-01 10:24:15 -04:00