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6489 Commits

Author SHA1 Message Date
Ken Stevens e819d40414 fix near searching for R4 2020-03-03 18:33:19 -05:00
Tadgh a510543933 Fix log conditional 2020-03-03 14:03:55 -08:00
Tadgh df7a9916c3 Swap from trace to info logging 2020-03-03 14:01:12 -08:00
Ken Stevens d104fbdf7d fixed a copy/paste error in bulk export with test 2020-03-03 16:40:31 -05:00
Ken Stevens b42502ae3c
Merge pull request #1744 from jamesagnew/ks-20200302-near-chain 
fix near-distance for chained searches in dstu3
 2020-03-03 14:48:54 -05:00
Ken Stevens ccd983ab42 review feedback: code improvement 2020-03-03 13:46:23 -05:00
Ken Stevens 705735b9c0 review feedback: javadoc 2020-03-03 13:29:10 -05:00
Ken Stevens 5b5ef08500 Merge remote-tracking branch 'remotes/origin/master' into ks-20200302-near-chain 2020-03-03 09:44:52 -05:00
James Agnew 4a160a2df3 Merge branch 'master' into ja_20200206_multitenancy 2020-03-03 09:25:19 -05:00
James Agnew 58b5bd9664
Limit type on _has query (#1743) 
* Limit type on _has query

* Add changelog
 2020-03-03 08:28:38 -05:00
James Agnew 3c2c1dab2e
Error on missing profile validation (#1742) 
* Error on missing profile validation

* Add changelog

* Test fixes
 2020-03-03 08:28:26 -05:00
James Agnew ac9a371f18 Add test 2020-03-03 08:28:04 -05:00
jamesagnew 13fbdf418f Add ignored test for #1740 2020-03-03 05:22:16 -05:00
Tadgh 4d7f39cfdc
Merge pull request #1741 from jamesagnew/elastic-apm-integration-for-search 
Create custom span for Search Threads for Elastic APM
 2020-03-02 21:46:45 -08:00
Ken Stevens bce1716c6c documentation 2020-03-02 22:13:21 -05:00
Ken Stevens a56df03055 restrict near-distance extraction to DSTU3 2020-03-02 21:50:57 -05:00
Ken Stevens 4e1be80525 fixme 2020-03-02 21:39:28 -05:00
Ken Stevens d1b54a9668 pre-review cleanup 2020-03-02 21:32:27 -05:00
Ken Stevens 27dcafe4f2 all but unit tests 2020-03-02 21:27:50 -05:00
Ken Stevens 24acb57f3b began with failing test. 
test now passes.
 2020-03-02 17:56:25 -05:00
Tadgh 8d9119faef Rework span name 2020-03-02 14:37:09 -08:00
Ken Stevens b2f9dd4578
extend pointcutlatch and simplify FhirClientResourceRetriever (#1737) 
* extend pointcutlatch and simplify FhirClientResourceRetriever

* extend pointcutlatch and simplify FhirClientResourceRetriever
 2020-02-28 16:38:13 -05:00
Gary Graham 6123e4b189 rework based on PR comments 2020-02-28 16:31:16 -05:00
Gary Graham ed7b9fc6b6 Initial attempt at integrating elastic APM for search performance 2020-02-28 16:09:16 -05:00
James Agnew 8c78e465b1
Defer large term delta adds (#1736) 
* Defer large term delta adds

* Add changelog
 2020-02-28 14:41:15 -05:00
James Agnew 5bc554949b
Remove deleted resources from cached search results (#1732) 
* Remove deleted resources from cached search results

* Add changelog

* Add tests
 2020-02-28 10:57:26 -05:00
Gary Graham b1d7072c42 Add precision checker for ordinal date returning on DateRangeParam 2020-02-26 22:22:42 -05:00
Gary Graham f86a4c9fa1 Add date ordinals to subscription matching checker 2020-02-26 17:05:23 -05:00
Gary Graham 2dc94de6bb roll back change to inmemory matcher test 2020-02-26 14:31:35 -05:00
Gary Graham 077f9df814 I keep finding more tests 2020-02-26 12:04:33 -05:00
Gary Graham a97443b1ed Fix test failures. One caused by invalid test. One caused by granularity need LT not LTE 2020-02-26 11:12:27 -05:00
Gary Graham 165f5fd808 fix bugs in calculating ordinal date 2020-02-26 09:32:20 -05:00
James Agnew cb9906580e
Index canonical references (#1728) 
* Index canonical references

* Add changelog

* Fix compile error

* Add whitespace
 2020-02-25 21:45:46 -05:00
Gary Graham df9e86ec66 Merge branch 'master' into date-match-bug 2020-02-25 17:26:53 -05:00
James Agnew b2b0ff22b4
Collapse date joins (#1726) 
* Collapse date joins

* Add changelog

* Address review comments

* Add whitespace

* fix test

Co-authored-by: Ken Stevens <ken.stevens@sympatico.ca>
 2020-02-25 17:17:13 -05:00
Gary Graham 2204fbeabd Adding some comments 2020-02-25 17:08:11 -05:00
Gary Graham 1e833af5f0 Variable reuse 2020-02-25 17:06:38 -05:00
Gary Graham a1b6e37395 Fix bug with Period bounds not counting as first value 2020-02-25 17:03:50 -05:00
Gary Graham f56e38148b Add flag to DaoConfig controlling behaviour 2020-02-25 16:43:17 -05:00
Gary Graham 97c98254d0 Extract Common functionality out of CalculateHashesTask, build CalculateOrdinalDatesTask based on it 2020-02-25 16:09:08 -05:00
Ken Stevens f1646fd184
Merge pull request #1727 from jamesagnew/ks-20200220-subscription-fix 
Switching cdrsubscribablefactory from @ComponentScan to @Bean
 2020-02-25 14:37:57 -05:00
Gary Graham 512af5b87d Add changelog entry 2020-02-25 14:09:51 -05:00
Gary Graham da7224ff89 update broken test to reflect new reality of business logic of ordinal date comparison 2020-02-25 14:07:03 -05:00
Gary Graham 3ec772b527 rework ResourceIndexedSearchParamDate constructor to support incoming string values 2020-02-25 14:06:36 -05:00
Ken Stevens 5656ca5b5b
Merge pull request #1729 from jamesagnew/ks-20200204-quiet-migrate-in-test 
Ks 20200204 quiet migrate in test
 2020-02-25 14:04:32 -05:00
Gary Graham 13cc8b69aa Add schema migration 2020-02-25 11:27:08 -05:00
Gary Graham 3b41b5b960 Type migration to boxed integer to avoid int defaulting to 0 2020-02-25 11:18:39 -05:00
Ken Stevens 38bae8866b quiet migration tasks during tests 
also add description to schema initialization tasks
 2020-02-25 09:43:34 -05:00
Gary Graham 34d5925393 Move common work to DateUtils. Rename function for clarity. 2020-02-25 09:37:57 -05:00
Ken Stevens 8d1d3cee75 Merge remote-tracking branch 'remotes/origin/master' into ks-20200204-quiet-migrate-in-test 2020-02-25 09:20:35 -05:00