Commit Graph

252 Commits

Author SHA1 Message Date
tyner e18f5796a1 Revert "completed instance will not be sent to the reduction step service"
This reverts commit aa149b6691.
2024-04-15 14:24:41 -04:00
tyner aa149b6691 completed instance will not be sent to the reduction step service 2024-04-15 14:19:42 -04:00
leif stawnyczy 3d7910415a merging together 2024-04-12 16:27:19 -04:00
tyner 8e76804d39 spotless 2024-04-12 14:11:53 -04:00
tyner 11e4ef8319 fixed bugs 2024-04-12 14:11:21 -04:00
tyner 0569ddc812 resolved review comments 2024-04-12 11:27:05 -04:00
tyner 2dc101bbc8 resolved review comments 2024-04-12 11:07:37 -04:00
tyner 292a4d3858 resolved review comments 2024-04-11 15:03:24 -04:00
tyner decdeafdc1 resolved review comments 2024-04-10 16:59:52 -04:00
tyner fd4fdd7541 resolved review comments 2024-04-10 09:17:44 -04:00
tyner d06337d103 spotless 2024-04-10 08:32:28 -04:00
tyner 2518531417 - hid the over-powered transition function behind a proper state action 2024-04-10 08:31:27 -04:00
tyner 1c1ceb0b27 - have only one path through the equeueReady method
- fixed tests
2024-04-10 07:51:04 -04:00
tyner 0aabdbdf4f - fix merges conflicts
- set first chunk to be always created in READY
2024-04-10 05:41:36 -04:00
tyner 1a7e4d4401 Merge remote-tracking branch 'origin/5745-ready-state-batch2' into 5818-update-batch2-framework-with-gate_waiting-state
# Conflicts:
#	hapi-fhir-storage-batch2-test-utilities/src/main/java/ca/uhn/hapi/fhir/batch2/test/IJobMaintenanceActions.java
#	hapi-fhir-storage-batch2-test-utilities/src/main/java/ca/uhn/hapi/fhir/batch2/test/IWorkChunkCommon.java
#	hapi-fhir-storage-batch2-test-utilities/src/main/java/ca/uhn/hapi/fhir/batch2/test/IWorkChunkStateTransitions.java
#	hapi-fhir-storage-batch2-test-utilities/src/main/java/ca/uhn/hapi/fhir/batch2/test/IWorkChunkStorageTests.java
2024-04-09 14:30:44 -04:00
tyner e8e8648301 Merge remote-tracking branch 'origin/5745-ready-state-batch2' into 5818-update-batch2-framework-with-gate_waiting-state
# Conflicts:
#	hapi-fhir-storage-batch2/src/main/java/ca/uhn/fhir/batch2/maintenance/JobInstanceProcessor.java
2024-04-09 14:16:04 -04:00
leif stawnyczy e483736f73 Merge branch '5745-ready-state-batch2' into 5767-add-poll-waiting-step 2024-04-08 16:03:10 -04:00
leif stawnyczy 8d84ed0b94 merging in masters 2024-04-08 15:46:33 -04:00
TipzCM 107de2cfba
reduction step failing fails jobs (#5831)
* adding a catch for failing reduction step

* spotless

* added changelog

---------

Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-mbp.home>
2024-04-08 13:51:41 -04:00
TipzCM 5d55594a73
Batch2 test refactor only (#5823)
* refactoring

* test refactor only

* spotless

* bumping version

---------

Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-mbp.home>
2024-04-05 21:39:03 -04:00
leif stawnyczy a791510111 Merge branch '5745-ready-state-batch2' into 5767-add-poll-waiting-step 2024-04-05 14:27:33 -04:00
leif stawnyczy 419d2ae369 spotless 2024-04-05 11:26:33 -04:00
leif stawnyczy 97b00ebd97 fixing a bug 2024-04-05 11:26:16 -04:00
leif stawnyczy 571b4cb210 merging up 2024-04-03 14:08:05 -04:00
tyner 28be0b85d6 - Implemented GATE_WAITING state for the batch2 state machine.
- This will be the initial status for all workchunks of a gated job.
- made compatible with the equivalent "fake QUEUED" state in the Old batch2 implementation.
- Updated corresponding docs.
- added corresponding tests and changelog
2024-04-03 10:59:02 -04:00
tyner 6c5e1a118f Revert "- Implemented GATE_WAITING state for the batch2 state machine."
This reverts commit 32a00f4b81.
2024-04-03 10:47:18 -04:00
tyner 32a00f4b81 - Implemented GATE_WAITING state for the batch2 state machine.
- This will be the initial status for all workchunks of a gated job.
- made compatible with the equivalent "fake QUEUED" state in the Old batch2 implementation.
- Updated corresponding docs.
- added corresponding tests and changelog
2024-04-03 10:44:08 -04:00
leif stawnyczy 74319a7b6d Merge branch 'master' into 5745-ready-state-batch2 2024-04-02 14:55:07 -04:00
leif stawnyczy e61f38eea9 spotless 2024-04-02 10:57:29 -04:00
leif stawnyczy 7f6d1aa9c7 review fixes round 2 2024-04-02 10:57:14 -04:00
leif stawnyczy da86cd1dd8 Merge branch '5745-ready-state-batch2' into 5767-add-poll-waiting-step 2024-04-01 11:14:21 -04:00
leif stawnyczy 2f7d2a4e07 review points round 1 2024-04-01 11:13:48 -04:00
Brenin Rhodes 9ddd8bf4d9
Update CR Operation Providers to latest version of CR release (#5751)
* Add support for latest version of CR and new $questionnaire operation

* Fix formatting in javadoc causing warning

* Update to 3.0.0 CR release

* Add support for expected parameter names from updated IG's

* Update Clinical Reasoning documentation

* Update pom.xml

* Create 5750-update-cr-operations.yaml

* fix doc

* Update to latest CR version

* Update pom.xml

* In version

* Update changelog

* Remove commented code
2024-03-28 11:44:29 -07:00
leif stawnyczy e1474c8cd5 fixing bug 2024-03-26 09:16:11 -04:00
leif stawnyczy 4be7fa742f spotless 2024-03-25 21:32:16 -04:00
leif stawnyczy 4a4be77351 review comments 1 2024-03-25 21:22:15 -04:00
leif stawnyczy 0288133d23 spotless 2024-03-25 15:31:01 -04:00
leif stawnyczy bde9947283 updating documentation and adding change log 2024-03-25 15:30:27 -04:00
leif stawnyczy c8db3c82ad fixing tests 2024-03-25 11:40:17 -04:00
leif stawnyczy a0305e64bf some tweaks 2024-03-25 10:47:44 -04:00
leif stawnyczy 6ac3c73234 spotless 2024-03-25 10:37:19 -04:00
leif stawnyczy db4ca99a3d review fixes 2024-03-25 10:36:55 -04:00
leif stawnyczy 708a737e5f remove text 2024-03-22 15:00:24 -04:00
leif stawnyczy ad44f37e55 Merge branch '5745-ready-state-batch2' into 5767-add-poll-waiting-step 2024-03-22 14:52:48 -04:00
leif stawnyczy b23028ee06 merging up 2024-03-22 14:49:06 -04:00
leif stawnyczy b399a7a619 commit changes 2024-03-22 14:48:43 -04:00
leif stawnyczy 26d6714a68 waiting step 1 2024-03-22 14:29:20 -04:00
leif stawnyczy 4ea872b897 spotless 2024-03-22 13:58:07 -04:00
leif stawnyczy 7fb98340a8 adding different paging mechanism 2024-03-22 13:57:52 -04:00
leif stawnyczy a00296f9fd fixing some tests and adding a view 2024-03-21 16:40:25 -04:00