5744 Commits

Author SHA1 Message Date
jamesagnew
fd73a593ea Work on merge 2019-10-25 08:50:34 -04:00
jamesagnew
cd84af30b1 Merge branch 'master' into ja_20190928_rationalize_search_param_extractor 2019-10-25 05:56:39 -04:00
jamesagnew
935ec9ebc2 License headers 2019-10-25 05:44:51 -04:00
Ken Stevens
bf3af43f32
Merge pull request #1563 from jamesagnew/ks-inmemory-source
in-memory _source search
2019-10-24 21:34:29 -04:00
Ken Stevens
f19100cbb3 final cleanup 2019-10-24 20:29:45 -04:00
Ken Stevens
4a2ed62357 review feedback 2019-10-24 20:25:16 -04:00
Ken Stevens
08472c1e3f ready to merge 2019-10-24 17:56:15 -04:00
Ken Stevens
5379ab8c2c implement in-memory match 2019-10-24 17:53:02 -04:00
Ken Stevens
b7aa327118 pre-review cleanup 2019-10-24 16:47:43 -04:00
Ken Stevens
4fa849a3e5 pre-review cleanup 2019-10-24 16:43:47 -04:00
Ken Stevens
43f17534bb commiting with FIXMEs so James can review 2019-10-24 16:40:53 -04:00
James Agnew
df4376606d
Validation cleanup (#1561)
* Validation cleanup

* Test fix

* Fix build

* Test tweaks
2019-10-24 13:09:18 -05:00
John Poth
969174136e Rename org.hl7.fhir.convertors package as it's already used 2019-10-24 12:23:38 -05:00
James Agnew
74c03b5bb7 Add a test 2019-10-24 08:32:52 -04:00
James Agnew
91ec0a6922 Test fix 2019-10-24 08:32:52 -04:00
James Agnew
385a885abf Add ability for resource source to be specified by header 2019-10-24 08:32:52 -04:00
James Agnew
0d3f7d4a03 Correctly handle searching by source in JPA server 2019-10-23 06:58:16 -04:00
Ken Stevens
be3ce538ed
Merge pull request #1557 from jamesagnew/ks-better-inmemory-error
Improved in-memory error messages
2019-10-23 00:05:58 -04:00
Anthony Sute
306b02e147 Additional tracing statements. 2019-10-22 20:41:52 -04:00
James Agnew
19247ffb46
Allow updating externalized binary (#1556)
* Add non working test

* Add a test

* FIx test

* Allow updating existing externalized binary data

* Add test

* Remove unneeded test

* Fix test
2019-10-22 18:10:03 -04:00
James Agnew
9e44049847 Allow for improved overriding of RestfulServer#newRequestDetails 2019-10-22 18:09:21 -04:00
James Agnew
371bf2e5cf Disable unit test SQL logging 2019-10-22 17:27:36 -04:00
James Agnew
9b94e4e26d
Allow uploading term deltas using CS resource (#1555)
* Work on accepting codesystem reources for delta operations

* Ongoing work on term uploader

* Restore the ability to use CodeSystem resources for the delta

* Add tests

* Fix NPE

* Test fixes
2019-10-22 17:11:39 -04:00
James Agnew
464c6c5b45
Upgrade dependencies and addess Semmle issues (#1554)
* Version bumps

* FIx build issues

* Address a few Semmle issues

* Work on tests

* Some test fixes

* Test fix

* Fix deletions

* Test fix

* Fix intermittent test failure

* One more dependency bump

* Add some test logging

* Remove bad import

* Add some tests

* Test updates
2019-10-22 17:10:58 -04:00
Ken Stevens
dbcff8d1fa Merge remote-tracking branch 'remotes/origin/master' into ks-better-inmemory-error 2019-10-22 17:10:06 -04:00
James Agnew
a375f761cb FIx typo in pom 2019-10-22 14:17:25 -04:00
James Agnew
5809457335 Credit for #1526 2019-10-22 14:01:21 -04:00
jelmer.terwal
c003047ca9 Split test from example 2019-10-22 13:58:52 -04:00
jelmer.terwal
a859b210e3 Previously the server would not start when using a CodeableConcept in a List in combination with Kotlin 2019-10-22 13:58:52 -04:00
jelmer.terwal
c337fdde14 Override breakes stuff here for Kotlin 2019-10-22 13:58:52 -04:00
jelmer.terwal
61adf61fc0 Remove no longer needed stuff 2019-10-22 13:58:52 -04:00
jelmer.terwal
5002a087bb Some work on jamesagnew/hapi-fhir/#1297 2019-10-22 13:58:52 -04:00
Ken Stevens
3115447748 Merge remote-tracking branch 'remotes/origin/master' into ks-better-inmemory-error 2019-10-22 10:46:31 -04:00
Ken Stevens
d0704269d7 ready for rereview 2019-10-22 10:13:49 -04:00
Ken Stevens
427f7397da ready for rereview 2019-10-22 10:13:49 -04:00
Ken Stevens
0f40b2c48f npe check for binary storage interceptor 2019-10-22 10:13:49 -04:00
Ken Stevens
2e7876b682 Merge remote-tracking branch 'remotes/origin/ks-binary-storage-NP-check' into ks-better-inmemory-error 2019-10-22 09:33:47 -04:00
Ken Stevens
ef35c4e7be ready for rereview 2019-10-22 09:32:10 -04:00
Ken Stevens
2e532e4e98 ready for rereview 2019-10-22 09:29:18 -04:00
Ken Stevens
d85e73c6fd Merge remote-tracking branch 'remotes/origin/master' into ks-binary-storage-NP-check 2019-10-22 08:58:51 -04:00
James Agnew
73961072a6
Handle invalid chains on custom search params (#1553)
* Handle invalid chains on custom search params

* Add some more tests

* One more test fix
2019-10-21 21:21:33 -04:00
Ken Stevens
347a66c429 improve in-memory error messages 2019-10-21 16:44:52 -04:00
Ken Stevens
842953eb1e npe check for binary storage interceptor 2019-10-21 10:59:25 -04:00
James Agnew
0af79b84d9
Use webjars instead of including JS deps (#1551)
* Use webjars instead of including JS deps

* Add changelog
2019-10-21 07:22:55 -04:00
James Agnew
bfbc73caaf
Auto externalize binary contents (#1550)
* Auto externaliZe binary attachments

* Work on externalization

* Auto externalize binary content

* Work on tests

* Fix alert
2019-10-19 09:01:00 -04:00
James Agnew
985cd49892 Test fixes 2019-10-18 16:36:05 -04:00
James Agnew
8edaebba9f One more fix to test infratructure 2019-10-18 15:57:09 -04:00
James Agnew
0cddb54476 Remove accidental commit 2019-10-18 15:52:03 -04:00
James Agnew
c455a46160 Add missing class 2019-10-18 15:51:20 -04:00
James Agnew
b51a93a2b5 Intermittent test fix 2019-10-18 15:46:02 -04:00