95f00e1c94
Fix NPE in tests
2018-10-04 08:33:40 -04:00
2050355e1e
Issue-545: Base resource profile links should point to http://hl7.org/fhir/StructureDefinition (invariant sdf-7 in spec)
2018-10-03 13:36:34 +02:00
12b23fbf23
Make JPA searches more efficient by prefetching a much smaller number of
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resources
2018-10-01 21:36:10 -04:00
3e445faf47
Squashed commit of the following:
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commit df641506885e09e63f80efc6c658d01a1a3a8142
Author: James Agnew <jamesagnew@gmail.com>
Date: Sat Sep 29 13:47:22 2018 -0400
Shrink validation resources
commit 4c1550eafa26f4235b4b8804741aecc03276b5c6
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Sep 28 22:45:28 2018 -0400
Updates to get R4 working
commit 8332f15291006691ed9b07ead3e3524b0fc85510
Author: jamesagnew <jamesagnew@gmail.com>
Date: Fri Sep 28 09:02:13 2018 -0400
Ongoing work on gettign R4 working
commit f7146cab7aed937bb625a8aec95744d76db00041
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Sep 28 05:21:01 2018 -0400
More work on sync
commit f48de4a10b1bab2584fee813017d9b27b237bfa9
Merge: 9e4f3cc722 aacb78b779
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Sep 27 20:11:29 2018 -0400
Merge branch 'sync_r4' of github.com:jamesagnew/hapi-fhir into sync_r4
commit 9e4f3cc722668aae31a77b19bf9b032af3ae01b0
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Sep 27 20:11:19 2018 -0400
Fix compile error
commit 7ec29e0ceda8f9013cbabb95767cbe15b4b81303
Merge: 23f7517325 002c4b3ff7dfb4de86f1
2018-09-29 13:48:35 -04:00
002c4b3ff7
Add retrigger subscription operation
2018-09-27 20:03:01 -04:00
706e004b9d
Bump to 3.6.0-SNAPSHOT
2018-09-19 10:24:48 -04:00
ce6a9dbc36
Fix regression from new jetty version
2018-09-11 08:27:34 -04:00
daef975734
Version bump to 3.5.0
2018-09-08 07:22:21 +08:00
77305eb570
Work on migrator
2018-09-04 10:32:08 +08:00
f4a21eadda
Fix this issue
2018-09-01 14:38:52 +08:00
fee0166800
Work on removing validstion cache
2018-08-28 05:26:06 -04:00
54c07263b6
Increase code lengths
2018-08-26 12:32:35 -04:00
df651c830e
Remove dynamic mode
2018-08-19 17:35:08 -04:00
bc1ee1f9dc
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-08-13 11:54:36 -04:00
78a7d64d2c
Merge pull request #1022 from alinleonard/master
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Patch operation on OperationsWhichAllowPreferHeader
2018-08-12 17:55:16 -04:00
4eb3281fa6
Merge branch 'client_enhancements'
2018-07-30 18:34:49 -04:00
4fcaf37729
Test cleanup
2018-07-30 18:34:28 -04:00
d6293cf9b3
Merge branch 'client_enhancements'
2018-07-30 09:42:38 -04:00
db0f082222
Merge pull request #996 from anamariaradu10/master
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Changes regarding behavior for Prefer header
2018-07-30 09:16:20 -04:00
0f1724ac0a
Credit and a unit test for #912
2018-07-30 05:48:38 -04:00
fc9f2ec0fb
FIx test issue
2018-07-29 18:20:09 -04:00
518092cbd4
More updates
2018-07-29 17:10:26 -04:00
3a5556006b
Merge branch 'master' into master
2018-07-27 16:59:52 +03:00
9c39733aff
Fixed issues
2018-07-27 16:48:44 +03:00
75a68a0332
Unit test fix
2018-07-26 18:58:23 +07:00
a4e4111376
Fix a unit test
2018-07-26 18:08:59 +07:00
3c80238f0e
Ongoing work on interceptors
2018-07-24 17:22:21 +07:00
23083a9283
Improvements to client and SP indexing in JPA server
2018-07-23 17:37:49 +09:00
b4aa4c0e89
Add protection against HTML injection attacks
2018-07-19 08:56:22 -04:00
a9291b4e4b
Add security test
2018-07-19 08:09:07 -04:00
e6ca408f67
Permissions for operations
2018-07-12 18:40:15 -04:00
03e7b018a6
Add skeleton for the $process-message operation in JPA erver
2018-07-12 17:52:24 -04:00
62c7c0fa55
fixed the AuthorizationInterceptorR4Test return code based on fhir doc
2018-07-09 16:43:31 +03:00
b929864873
Merge branch 'improve_jpa_indexes'
2018-07-01 12:08:03 -04:00
495fd9f68e
Add support for patch in AuthorizationInterceptor
2018-07-01 11:46:11 -04:00
e5cb609f4d
Performance improvements
2018-06-24 20:02:27 -04:00
e9fffd3cdc
Allow indexing in custom search params to descend into contained
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resources
2018-06-22 11:22:07 -04:00
ed0b5f54a5
More authorizationinterceptor tweaks for better security
2018-06-12 21:52:01 +08:00
cc0e836680
Auth interceptor early checks ( #995 )
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* Validator fix
* Enhance AuthorizationInterceptor so that it tries to deny access earlier
for compartment searches that are outside the allowable compartment.
* FIx DSTU2 test that wasn't updated
* More test fixes
2018-06-10 17:48:20 -04:00
6feb23896f
Hopefully fix #983
2018-06-06 15:51:23 -04:00
987679483a
Version bumps
2018-06-03 15:29:10 -04:00
9db3be8536
Include implementation URL in generated capabilitystatement
2018-06-03 14:22:15 -04:00
d127a89047
Some test fixes
2018-05-30 11:01:43 -04:00
a52805e504
Work on JDK9 support
2018-05-30 05:45:08 -04:00
7951d883d0
Merge branch 'master' into java9
2018-05-29 08:43:21 -04:00
0e2c57fa60
Bumping version.
2018-05-28 17:44:38 -04:00
27d0d4d7af
Fix build failure
2018-05-28 11:51:26 -04:00
2871920734
Preparing release.
2018-05-28 10:45:47 -04:00
67f21426cb
Disable content header on response for non-create operations
2018-05-25 07:28:01 -04:00
a3687e446e
Correctly handle missing search params with new indexing infrastructure
2018-05-23 11:42:38 -04:00
2f2900e837
Improve indexing on JPA server in anticipation of a new indexing
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strategy in HAPI FHIR 3.5.0
2018-05-23 08:09:57 -04:00
98d997c620
Add changelog and credit for #867
2018-05-23 06:21:00 -04:00
4d93b78c24
Credit for #836
2018-05-22 08:44:17 -04:00
07d0cc7876
Merge branch 'master' into bpCheckValFix
2018-05-17 09:53:41 +02:00
78f9d6333a
temp. fixed: "Attempt to read a single element when there is more than one present" #949
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Will be overwritten by next RI import!
2018-05-17 09:43:35 +02:00
730d02b7c6
added R4 core-extension validation support
2018-05-16 18:51:55 -04:00
d29a9a7f96
AutohrizationInterceptor should correctly recognize type-level operation
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invocations
2018-05-15 16:14:10 -04:00
4d62120a18
Fix issues reported by errorprone
2018-05-15 08:44:15 -04:00
a3ff08d9ec
Replace phloc with ph for #775 ( #930 )
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* Replace phloc with ph
* Enable schematron tests
* Make HAPI-FHIR ph-schematron on OSGI
* Work on getting tests passing
* Another test fix
* Fix up transaction handling for DSTU2
* Add changelog
* Avoid double transaction
* Dont use readonly
* One more test fix
* Update to snapshow build
* Resolve a circular dependency
* Try to fix tests
* Solve recurring NPE in DSTU2 tests
* Fix one more test
* Test fix
* More test threading fixes
* One more attempt to get tests passing
* Refactoring for tests
* Refactoring for tests
2018-05-14 17:38:40 -04:00
3d762b984b
Sync to R4 definitions
2018-05-12 19:35:42 -04:00
b17eebd8d2
Squashed commit of the following:
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commit 2be11651c2b3bb5f9052f6b1082ba481a69c265f935938e92c43568a1f8de95894e6439393fb8f4f437f5051e420c51add4f7bf2b0a0e9adc73e75c9
2018-05-10 11:53:32 -04:00
7688be1231
Work on getting java9 building
2018-05-03 18:34:29 -04:00
593a705365
Performance enhancements on the CapabilityStatement generator for JPA
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server
2018-04-28 11:06:42 -04:00
09b1f547d0
Add expunge
2018-04-24 15:11:00 -04:00
07e7af746f
Work on expunge operation
2018-04-22 22:03:23 -04:00
a21d0a7752
Add auth tester methods
2018-04-22 19:30:09 -04:00
591539cf13
Add expunge method
2018-04-22 18:34:56 -04:00
8c889267e5
One more parser fix
2018-04-18 06:20:11 -04:00
162069776a
Correctly handle encoding contained resources where some have user
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assigned IDs and some do not
2018-04-17 18:26:06 -04:00
c5b286921e
Tests all passing
2018-03-30 15:18:57 -04:00
180336e076
Sync to master
2018-03-29 06:54:24 -04:00
53c2d8a38d
Merge branch 'master' into loinc_loader_update
2018-03-29 06:21:55 -04:00
418e82032f
Prep for 3.3.0
2018-03-29 05:48:13 -04:00
d9c167455e
Make sure we correctly clean up resources
2018-03-27 15:20:22 -04:00
b56d65ef5b
Merge pull request #871 from johnpoth/hapi-fhir-osgi
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Implement #826 - add OSGI support and Apache Karaf features with inte…
2018-03-27 06:06:34 -04:00
29c09e40f0
Merge pull request #858 from patrick-werner/master
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added Test for #11 to Dstu3 and R4, fixed #853
2018-03-24 06:31:24 -04:00
308ac63a77
Merge branch 'master' into loinc_loader_update
2018-03-20 07:53:41 -04:00
6359f7f8a1
More work on loinc
2018-03-19 08:51:02 -04:00
ff04ab3358
${argLine} -> [at]{argLine}
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see:
http://maven.apache.org/surefire/maven-surefire-plugin/faq.html#late-property-evaluation
2018-03-19 10:45:33 +01:00
0cee57392a
Merge remote-tracking branch 'upstream/master'
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# Conflicts:
# hapi-fhir-validation/src/test/java/org/hl7/fhir/r4/validation/FhirInstanceValidatorR4Test.java
2018-03-07 11:45:31 -03:00
e201091e3a
Update licenses for changed files
2018-03-04 13:53:04 -05:00
d22670ddb5
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-03-04 12:21:07 -05:00
2f7751a079
Move stopwatch into hapi-fhir-base and add timing into to client
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LoggingInterceptor
2018-03-04 12:13:18 -05:00
8bdca012d6
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-03-04 11:04:07 -05:00
07290ae8a0
Sync to latest R4 code
2018-03-04 11:02:47 -05:00
b2ceb87a70
Work on #873
2018-03-03 17:50:29 -05:00
0c0b9bd74b
Fix #814 - Don't create duplicate contained resources
2018-03-02 09:46:29 -05:00
66ebfa0ed3
Implement #826 - add OSGI support and Apache Karaf features with integration tests
2018-02-28 11:32:53 +01:00
458401864b
Handle deletes properly in HashMapResourceProvider
2018-02-25 14:20:04 -05:00
84c72203b7
Add HashMapResourcePrvider
2018-02-25 13:16:02 -05:00
a8f3c2efb6
added Test for #11 to Dstu3 and R4
2018-02-21 16:03:31 +01:00
84dcd51091
Add tests for #814
2018-02-12 09:25:59 -05:00
e4785b17b5
Add test
2018-02-08 17:50:45 -05:00
a395e48cd4
Don't crash when a multitenant server has a request for /
2018-02-04 18:44:37 -05:00
371be03b0f
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2018-02-02 13:20:09 -05:00
0e2d55081f
Fix a crash when no count parameter supplied
2018-02-02 12:31:59 -05:00
351a2fc2f1
Fix #837 - Use non-legacy content-type for plain json and xml accept
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header
2018-02-02 06:43:19 -05:00
b61887e841
Improve performance of base64 validation
2018-01-30 17:37:12 -06:00
f7f69f6148
Ad some tests for #837
2018-01-26 08:39:46 -05:00
5750cfd03c
Prevent double calling server interceptor methods under certain
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conditions
2018-01-26 07:44:13 -05:00
0677f35847
Implement tenant ID checking in authorizationinterceptor
2018-01-23 11:32:35 -05:00
16038ece26
Version bump to 3.3.0-SNAPSHOT
2018-01-23 10:31:01 -05:00
3644151a69
Fix crash in JSON parser when parsing extensions on primitive elements
2018-01-18 09:07:23 +07:00
6468ca474a
Verion bump to 3.2.0
2018-01-13 02:14:33 -05:00
01186ec8cb
Squashed commit of the following:
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commit ab876ef864005b6758d3e00a1bb1ef2dad5d2161
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Jan 12 18:59:15 2018 -0500
Tests all passing
commit 4f8a5d98307da1bb5ca7602e34b1d3b791f73d25
Author: jamesagnew <jamesagnew@gmail.com>
Date: Fri Jan 12 08:21:58 2018 -0500
Almost compiling
2018-01-12 18:59:43 -05:00
f6c9e3d0fe
Add multitenancy support for server
2018-01-11 11:14:54 -05:00
9a72927dbc
Fix #808 - Use version from meta if not found in the resource ID
2018-01-08 14:07:27 -05:00
377bae8c16
Allow interceptors to modify request contents
2018-01-06 14:27:32 -05:00
19863de012
Update javadocs on IdType
2017-12-19 15:57:22 -05:00
44ec091b35
Still more test tweaks
2017-12-13 13:29:24 -05:00
3e296f9d1b
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-11-25 17:53:01 -05:00
6afe6804db
Fix #796 - Correctly escape spaces in generated URLs
2017-11-25 17:52:12 -05:00
5b909b4746
Version bump to 3.2.0-SNAPSHOT
2017-11-24 13:32:47 -05:00
42dd34252d
Version bump to 3.1.0
2017-11-23 13:27:21 -05:00
4887f18bb3
Further refine #762
2017-11-23 11:05:11 -05:00
db1d2d77cd
Updated tests
2017-11-23 10:40:44 -05:00
ffac599a30
Credit and tests for #762
2017-11-23 06:42:10 -05:00
059265a041
Test cleanup
2017-11-22 19:15:27 -05:00
4042a3a353
Prevent accidental deletion of deeply nested resources in JPA server
2017-11-22 18:17:35 -05:00
a87323fa08
Add tests
2017-11-17 09:53:44 +01:00
59f4177a59
Fix #750 - Elements are not preserved in page requests
2017-11-06 19:49:50 -05:00
675d7981bf
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-11-05 18:53:09 -05:00
37c8e6c645
Add test for #751
2017-11-05 18:52:28 -05:00
75bfb6af1b
Add support for Binary X-Security-Context header in server
2017-11-02 11:38:43 -04:00
a1ffe0d1c3
Sort methods
2017-10-31 20:55:36 -04:00
dea9cdde58
One more Windows test
2017-10-31 20:41:03 -04:00
3cd7c8a61c
Fix tests to work on Windows
2017-10-31 20:38:26 -04:00
1d06c9165b
Remove more windows line ending dependencies
2017-10-31 17:55:16 -04:00
c5b7fea01d
Merge pull request #725 from InfiniteLoop90/issue-724-copy-domain-resource-id
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Fixes #724 - Resource IDs are now copied when copying instances of subclasses of DomainResource for DSTU2 and DSTU2.1.
2017-10-31 17:41:33 -04:00
72ec59d51b
Remove Linux specific line endings from test
2017-10-29 21:54:40 -04:00
0875318842
Merge pull request #711 from InfiniteLoop90/master
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Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable
2017-10-26 17:56:48 -04:00
15ba0dff03
Clean up email subscription type
2017-10-26 06:02:12 -04:00
16e19a9fed
Fix #720 - Failure to parse custom type
2017-10-21 13:47:03 -04:00
73382d85ca
Fix #761 - Restore codesystem package from DSTU3 and add unit tests to
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verify existence
2017-10-17 15:18:36 -04:00
a782bd7630
Fix a number of problems reported by ErrorProne
2017-10-16 10:00:27 -04:00
9ca85b4cf3
Re-enable errorprone on standard hapi fhir build. woohoo!
2017-10-15 11:27:30 -04:00
375a2fcf6f
Remove some failing tests that never got run anyhow
2017-10-13 11:51:04 -04:00
31fb1236a1
Reuse bundle ID when returning query cache results
2017-10-11 06:05:14 -04:00
ce720f5601
Add support for Cache-Control header in JPA server and client
2017-10-05 13:38:53 -04:00
87383ad802
Version bump to 3.1.0-SNAPSHOT
2017-09-27 21:23:34 -04:00
e19c13fa6f
Prepare 3.0.0 release
2017-09-24 17:55:16 -04:00
49bdaa1a45
Version bump to 3.0.0
2017-09-23 17:31:39 -04:00
2fa912a43f
Use serialized messages for queues
2017-09-19 22:01:36 -04:00
e94d639d29
Refactor websockets to use queuing mechanism
2017-09-14 21:29:57 -05:00
97b44965ce
Lots of work on new subscription model
2017-09-13 19:05:29 -07:00
836d4d051b
Work on IG Pack uploading
2017-09-07 20:33:19 -07:00
989246f0da
Include Location header details in non-verbose response for client
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interceptor
2017-09-06 06:26:41 -07:00
8f06cf7322
Related to issue #724 - Added more unit tests
2017-09-05 14:45:32 -05:00
5650238421
Related to issue #724 - Also ensures that the ID is copied for HL7 DSTU2 and DSTU2.1 subclasses of BackboneElement when the #copy() method is called. Also added unit tests for these and reverted the line endings of the HL7 DSTU2 and DSTU2.1 versions of the DomainResource class back to CRLF
2017-09-04 22:58:15 -05:00
8fb528c1c9
Related to issue #724 - forgot a right curly brace in Javadoc comment
2017-09-04 10:48:37 -05:00
James Agnew
Stig Rohde Døssing
anamariaradu10
Ana Maria Radu
Alin
Diederik Muylwyk
patrick-werner
jpoth
Clayton Bodendein