a73d0421ba
Merge branch 'gg_20201105-remove-person-references' of github.com:jamesagnew/hapi-fhir into gg_20201105-remove-person-references
2020-11-09 15:31:13 -05:00
06446ae0bf
Address review comments
2020-11-09 15:29:50 -05:00
4865e8a410
Fixed code for use case #2 test case
2020-11-09 15:29:50 -05:00
4f6be9d9a7
Reduce test timeout
2020-11-09 14:46:15 -05:00
ac3b1e3e17
Fixed code for use case #3 test case
2020-11-09 11:46:56 -05:00
5d6ede660b
Use case #3 testing
2020-11-09 11:07:58 -05:00
4c0fab8cec
Merge remote-tracking branch 'origin/master' into gg_20201105-remove-person-references
2020-11-09 09:06:50 -05:00
9422ba7a02
WIP Refactoring 3
2020-11-06 17:02:07 -05:00
27afbe93b3
Cleanup
2020-11-06 15:39:33 -05:00
063d04cc79
One more test passing. rework EID updates to support the terser method
2020-11-06 14:54:37 -05:00
79793f9c40
WIP Refactoring 2
2020-11-06 13:16:50 -05:00
71856dbd64
WIP Refactoring
2020-11-06 12:29:11 -05:00
22fe9420ac
Add tests
2020-11-06 09:10:47 -05:00
aba6953360
Mild comment :)
2020-11-05 23:06:54 -05:00
0b4f647520
EID copy magic
2020-11-05 17:39:25 -05:00
e9509f9963
WIP removing Person - ID cloning
2020-11-05 14:46:30 -05:00
4bfc62804c
WIP removing Person
2020-11-05 14:23:53 -05:00
656b8aeba7
Partial removal of getPersonFromTarget
2020-11-05 13:41:01 -05:00
5797cd0682
* Add source_resource_id column
...
* Add source_resource columm
Still need to depracate the old columns.
Reworked a Matcher to ignore Person
2020-11-05 13:07:45 -05:00
ef2041d89d
Merge remote-tracking branch 'origin/master' into 2161-refactor-empi
2020-11-05 09:25:38 -05:00
0dfc4597e8
comment fixes and removing dead code
2020-11-05 09:24:53 -05:00
ce1caee9fa
Feature 2020 10 28 reverse chain ( #2160 )
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* Added test cases for multiple '_has'
* Fixed composite search for the new SearchBuilder
* Added more test cases
2020-11-05 05:27:11 -05:00
38a975f09d
Im 20201028 fix versioned valueset expansions ( #2151 )
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* Fixes to ValueSet expansion for cases where CodeSystem is versioned.
* Fixes to ValueSet expansion for case where URL and filter parameters specified.
* Restore maven-wrapper.properties file inadvertently deleted from GitHub.
* Fix JUnit tests and ValueSet exclude.
Co-authored-by: ianmarshall <ian@simpatico.ai>
2020-11-04 16:36:43 -05:00
228e75b501
Bump core to latest versions ( #2154 )
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* Bump core to latest versions
* Compile fix
* Bump to non snapshot core library
2020-11-03 15:43:37 -05:00
382c0f2119
Merge pull request #2156 from jamesagnew/2155-Incorrect_EMPI_normalized_score_calculation
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Fixed score calculation to use selected bits in the vector. Addresses…
2020-11-03 14:40:07 -05:00
4c01025934
Updated based on code review feedback
2020-11-03 13:10:16 -05:00
52e8761701
Added rule count for proper scoring implementation
2020-11-02 17:15:39 -05:00
296b193bb5
Fixed score calculation to use selected bits in the vector. Addresses #2155
2020-11-02 09:22:00 -05:00
590d3c468b
Merge pull request #2149 from jamesagnew/EMPI_-_Patient_matching_using_MPI_-_return_mode,_score,_and_grade
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#2148 Initial implementation
2020-10-28 17:43:20 -04:00
954fbf054f
Fixed implementation based on the feedback.
2020-10-28 15:09:15 -04:00
5e8ec8d6f3
Resolve crash in InMemory SP resolver for empty source ( #2150 )
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* Resolve crash in InMemory SP resolver for empty source
* Add changelog
2020-10-28 14:30:32 -04:00
6ccb7c8312
Bump HTTPClient version
2020-10-28 10:28:04 -04:00
170cf245cc
#2184 Initial implementation
2020-10-27 15:50:29 -04:00
53c23b8d9b
Add method to stringutil
2020-10-27 11:29:16 -04:00
783cbb3cf8
Bump postgres driver version
2020-10-26 19:34:50 -04:00
72294fc0a0
Suport typeFilter parameter for bulk export ( #2147 )
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* Cleanup
* Fix tests
* Work on bulk export
* Work on export
* Test fixes
* Add changelog
* Address review comments
* Address review comments
2020-10-26 12:28:07 -04:00
137e215003
Docs fixes
2020-10-26 07:36:46 -04:00
8000d2d0cf
SQL Join Rework ( #2086 )
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* switched to adding annotations. Just did a test with Token, but the sql looks clean.
* switched to adding annotations. Just did a test with Token, but the sql looks clean.
* added the other six index links
* trying different annotations
* Start testing
* Update resources on package install
* Add changelog
* Join rework
* CLean up SQL builder
* Add docs
* SP rework
* Join work
* Work on params
* Work on refactor
* Work on chains
* Work on joins
* Rework queries
* Work on queries
* Many more tests passing
* Refs test
* Work on sorting
* Work on tests
* More joins work
* Work on tests
* Work on queries
* Tests passing
* More test fixes
* Test fixes
* Work on SQL
* Tests passing
* Add some tests
* Add some tests
* License headers
* Use entity manager to get datasourcd
* One more fix
* Model cleanup
* Ongoing work
* Fixes
* Fixes
* Work on joins
* Ongoing fixes
* Merge conflict
* Cleanup
* clean up unused fields
* Work on join
* COmpile fix
* Rework querying
* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/HibernateDialectProvider.java
Co-authored-by: Ken Stevens <khstevens@gmail.com>
* Address review comments
* Resolve fixmes
* Test fix
* Test fixes
* Test fix
Co-authored-by: Ken Stevens <khstevens@gmail.com>
2020-10-26 05:24:26 -04:00
4a5f5199b5
Add custom partition interceptor examples ( #2145 )
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* Add custom partition interceptor examples
* Add documentation
* Test fixes
* Remove outdated test
* Test modification
2020-10-25 19:19:40 -04:00
0fdff3e052
Credit for #2142
2020-10-23 10:33:49 -04:00
d468183edd
Validate theSearchParamRegistry is not null ( #2142 )
2020-10-23 10:29:55 -04:00
1c9e4dcc81
Merge pull request #2135 from jamesagnew/im_20201015_loinc_versioned_resourceids
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Im 20201015 loinc versioned resourceids
2020-10-22 19:01:31 -04:00
fd46d0965f
Merge pull request #2141 from jamesagnew/im_20201020_package_installer_enhancements
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Enable package installer to load non-Conformance resources
2020-10-21 18:28:15 -04:00
115b09e4d4
Throw exception if any resources in package have no url and no identifier.
2020-10-21 17:23:40 -04:00
830ad70089
Add changelog for package installer enhancement.
2020-10-21 16:18:10 -04:00
756432e61a
Enable package installer to load resources other than conformance resources.
2020-10-21 15:47:31 -04:00
9b4c1a58a6
License header updates
2020-10-21 12:58:29 -04:00
3b91873b7c
delete expunge ( #2131 )
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Added delete _expunge=true
2020-10-20 17:21:50 -04:00
3738297354
Test fix
2020-10-19 20:13:31 -04:00
9e8e98b6fb
Rework scheduler to use Spring factory ( #2134 )
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* Rework scheduler to use Spring factory
* Add test
2020-10-19 10:33:12 -04:00
Nick Goupinets
Tadgh
jamesagnew
Frank Tao
IanMMarshall
Nick Goupinets
blangley28
ianmarshall
Ken Stevens