86f2761580
Merge branch 'master' into batch-empi-job
2020-07-07 07:52:42 -07:00
5b402de581
Add EmpiTargetType to link
2020-07-07 07:51:41 -07:00
b7e5705f57
Fix tests to cover other scenarios
2020-07-06 14:57:28 -07:00
f82a53e6f9
Merge branch 'master' into batch-empi-job
2020-07-06 13:12:20 -07:00
2f11a673e3
change test name
2020-07-06 11:53:40 -07:00
be429299de
Change string name
2020-07-06 11:46:20 -07:00
84da932187
fix test
2020-07-06 11:36:47 -07:00
db127ab32f
tidy test file
2020-07-06 11:01:53 -07:00
f356c7c385
Migrate to JUnit5 ( #1952 )
...
* Work on junit
* Work on junit 5
* Work on junit 5
* Bump errorprone vcersion
* Work on tests
* Junit 5 tweaks
* Fixes
* Work on tests
* Work on junit5
* Work on tests
* Test fixes
* Work on junit5
* Test work
* Get junit5 working
* Test fix
* Work on tests
* WOrk on tests
* Work on tests
* fixes
* Compile fix
* One more tweak
* Compile fix
* Add changelog
* Fix compile error
* Compile fix
2020-07-04 18:28:16 -04:00
25d8668f55
Add Basic provider method, skeleton of tests
2020-07-03 15:21:32 -07:00
1b7e5b75f1
wip
2020-06-30 14:53:54 -07:00
e365e643ba
Merge pull request #1906 from jamesagnew/spring-batch-integration
...
Spring batch integration
2020-06-28 16:10:43 -07:00
bf8de84801
License header
2020-06-26 19:25:36 -04:00
7322760f5d
Merge remote-tracking branch 'origin/spring-batch-integration' into spring-batch-integration
2020-06-25 15:27:46 -04:00
c11b6eeab6
back out Tx wrap
...
use qualifier
2020-06-25 15:27:31 -04:00
1d9641a736
fix empilinks
2020-06-25 10:28:03 -07:00
93da042d19
fix empi tests so they work with Spring Batch
...
(all but one test fixed)
2020-06-25 11:14:42 -04:00
3da4ad280b
undoes merge issues
2020-06-24 20:00:52 -07:00
571589d00d
Merge branch 'master' into spring-batch-integration
2020-06-24 13:46:13 -07:00
38a2b00663
Empi 69 and candidates ( #1936 )
...
broaden empi blocking searches to support and searchparams as well as ors
2020-06-24 09:12:56 -04:00
798fdb9cc2
Merge branch 'master' into spring-batch-integration
2020-06-15 09:10:41 -07:00
d164e2d450
Empi 28 matchers ( #1918 )
...
* adding matchers
* reorganize resource matching api
* added precision sensitive date matcher
* stricter rules validation
* validate thresholds
* validate paths. with FIXMES
* validate searchparams
* fix merge compile error
* add soundex, validate no duplicate names
* add normalize substring
* add exact field to matcher
* EXACT -> STRING, exact=true
* cleanup test method
* match test passes with fixmes
* fixed vector matching
* fixed vector matching
* updating documentation and fixing tests
* updated rules documentation with latest matchers
* updated rules documentation with latest matchers
* created eid page
* eid documentation
* pre-review cleanup
* clean up beans
* disentangling beans
* checkstyle
* noop to trigger CI
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi_details.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi_details.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi_details.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi_details.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_empi/empi_rules.md
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* review feedback
* review feedback
* review feedback
* review feedback
* review feedback
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
2020-06-14 17:15:56 -04:00
6fc5b753e5
Readding imports
2020-06-09 19:20:43 -07:00
942fc313ec
Code review comments
2020-06-09 19:00:41 -07:00
d6a5cee6ba
fix test ( #1909 )
2020-06-09 11:38:39 -04:00
82b4864d79
Empi 57 filter out inactive person ( #1903 )
...
* begin with failing test
* test passes
* pre-review cleanup
* little fix
* fix intermittent
2020-06-09 09:52:40 -04:00
dd84846b94
Empi 56 link merged person ( #1902 )
2020-06-05 15:50:50 -04:00
558f419955
Empi 54 not duplicate ( #1900 )
...
add operation to unduplicate persons
2020-06-05 12:21:09 -04:00
21330a0a22
Transaction create performance improvement ( #1899 )
...
* Work on perf issue
* Improve write performance for large bundles with tags
* Add changelog
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_1_0/1899-improve-write-xact-perf-with-tags.yaml
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/util/MemoryCacheService.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/util/MemoryCacheService.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Test fix
* Test fixes
* Test fixes
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
2020-06-05 05:26:06 -04:00
eb7b8e816b
Empi 58 no match create person ( #1898 )
2020-06-04 16:07:50 -04:00
9136231b3b
Empi 62 resource history ( #1894 )
2020-06-03 18:00:20 -04:00
33753881e2
Empi 55 deactivate merged ( #1883 )
2020-06-03 13:12:01 -04:00
61f1b57b2a
Empi merge persons fixes ( #1882 )
2020-06-02 12:41:26 -04:00
056721829d
License header updates
2020-05-22 15:56:14 -04:00
d1b963321a
MVP EMPI implementation ( #1857 )
...
EMPI Initial Implementation (still plenty of known gaps)
2020-05-22 15:03:20 -04:00
Tadgh
James Agnew
Tadgh
Ken Stevens