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2876 Commits

Author SHA1 Message Date
Tadgh
df7a9916c3 Swap from trace to info logging 2020-03-03 14:01:12 -08:00
Ken Stevens
d104fbdf7d fixed a copy/paste error in bulk export with test 2020-03-03 16:40:31 -05:00
Ken Stevens
705735b9c0 review feedback: javadoc 2020-03-03 13:29:10 -05:00
Ken Stevens
5b5ef08500 Merge remote-tracking branch 'remotes/origin/master' into ks-20200302-near-chain 2020-03-03 09:44:52 -05:00
James Agnew
4a160a2df3 Merge branch 'master' into ja_20200206_multitenancy 2020-03-03 09:25:19 -05:00
James Agnew
58b5bd9664
Limit type on _has query (#1743) 
* Limit type on _has query

* Add changelog
 2020-03-03 08:28:38 -05:00
James Agnew
3c2c1dab2e
Error on missing profile validation (#1742) 
* Error on missing profile validation

* Add changelog

* Test fixes
 2020-03-03 08:28:26 -05:00
Ken Stevens
a56df03055 restrict near-distance extraction to DSTU3 2020-03-02 21:50:57 -05:00
Ken Stevens
4e1be80525 fixme 2020-03-02 21:39:28 -05:00
Ken Stevens
d1b54a9668 pre-review cleanup 2020-03-02 21:32:27 -05:00
Ken Stevens
27dcafe4f2 all but unit tests 2020-03-02 21:27:50 -05:00
Ken Stevens
24acb57f3b began with failing test. 
test now passes.
 2020-03-02 17:56:25 -05:00
Tadgh
8d9119faef Rework span name 2020-03-02 14:37:09 -08:00
Gary Graham
6123e4b189 rework based on PR comments 2020-02-28 16:31:16 -05:00
Gary Graham
ed7b9fc6b6 Initial attempt at integrating elastic APM for search performance 2020-02-28 16:09:16 -05:00
James Agnew
8c78e465b1
Defer large term delta adds (#1736) 
* Defer large term delta adds

* Add changelog
 2020-02-28 14:41:15 -05:00
James Agnew
5bc554949b
Remove deleted resources from cached search results (#1732) 
* Remove deleted resources from cached search results

* Add changelog

* Add tests
 2020-02-28 10:57:26 -05:00
Gary Graham
f86a4c9fa1 Add date ordinals to subscription matching checker 2020-02-26 17:05:23 -05:00
Gary Graham
2dc94de6bb roll back change to inmemory matcher test 2020-02-26 14:31:35 -05:00
Gary Graham
077f9df814 I keep finding more tests 2020-02-26 12:04:33 -05:00
Gary Graham
a97443b1ed Fix test failures. One caused by invalid test. One caused by granularity need LT not LTE 2020-02-26 11:12:27 -05:00
James Agnew
cb9906580e
Index canonical references (#1728) 
* Index canonical references

* Add changelog

* Fix compile error

* Add whitespace
 2020-02-25 21:45:46 -05:00
Gary Graham
df9e86ec66 Merge branch 'master' into date-match-bug 2020-02-25 17:26:53 -05:00
James Agnew
b2b0ff22b4
Collapse date joins (#1726) 
* Collapse date joins

* Add changelog

* Address review comments

* Add whitespace

* fix test

Co-authored-by: Ken Stevens <ken.stevens@sympatico.ca>
 2020-02-25 17:17:13 -05:00
Gary Graham
2204fbeabd Adding some comments 2020-02-25 17:08:11 -05:00
Gary Graham
1e833af5f0 Variable reuse 2020-02-25 17:06:38 -05:00
Gary Graham
f56e38148b Add flag to DaoConfig controlling behaviour 2020-02-25 16:43:17 -05:00
Gary Graham
512af5b87d Add changelog entry 2020-02-25 14:09:51 -05:00
Gary Graham
da7224ff89 update broken test to reflect new reality of business logic of ordinal date comparison 2020-02-25 14:07:03 -05:00
Gary Graham
3ec772b527 rework ResourceIndexedSearchParamDate constructor to support incoming string values 2020-02-25 14:06:36 -05:00
Gary Graham
3b41b5b960 Type migration to boxed integer to avoid int defaulting to 0 2020-02-25 11:18:39 -05:00
Gary Graham
34d5925393 Move common work to DateUtils. Rename function for clarity. 2020-02-25 09:37:57 -05:00
Gary Graham
7f5b3394e0 Hacky first-pass of adding ordinal date field to ResourceIndexedSearchParamDate and using it for search 2020-02-24 19:34:16 -05:00
Ken Stevens
b33ad73d46 switch subscriptionchannelfactory to autowire 2020-02-24 14:28:14 -05:00
Ken Stevens
18d859281e Merge remote-tracking branch 'remotes/origin/master' into date-match-bug 2020-02-24 11:47:43 -05:00
Ken Stevens
41b5eb2484 Switching cdrsubscribablefactory from @ComponentScan to @Bean 2020-02-23 15:43:30 -05:00
j-chan
c0811376b7
Moved TranslateRawParameters method from BaseHapiFhirResourceDao to BaseStorageDao (#1722) 2020-02-20 10:52:43 -05:00
James Agnew
6200cd2ddc Add test asserts 2020-02-19 21:21:22 -05:00
James Agnew
79ad0aebb5 Add a test 2020-02-19 18:01:35 -05:00
James Agnew
a05c4ce9eb
Don't thrash delta links (#1721) 
* Don't thrash delta links

* Add changelog

* Remove commented out code
 2020-02-19 17:46:54 -05:00
James Agnew
ab8dfa5a03
Avoid multi-term for ElasticSearch (#1717) 
* Avoid multi-term for ElasticSearch

* Add changelog

* Remove redundant code
 2020-02-18 16:40:44 -05:00
IanMMarshall
fba28950ec
Merge pull request #1693 from jamesagnew/im_20200131_remove_circular_dependency_forcedid 
Changes to schema to loosen dependencies involving Forced ID table
 2020-02-18 14:16:09 -05:00
James Agnew
64f07e4dc0
Includes performance enhancement (#1702) 
* Includes performance enhancement

* Add changelog

* Test fix

* Fix typo

* A few coverage cleanups

* Test fix

* Fix changelog
 2020-02-18 14:11:48 -05:00
ianmarshall
f7db280099 Merge remote-tracking branch 'remotes/origin/master' into im_20200131_remove_circular_dependency_forcedid 
# Conflicts:
#	hapi-fhir-jpaserver-migrate/src/main/java/ca/uhn/fhir/jpa/migrate/tasks/HapiFhirJpaMigrationTasks.java
 2020-02-18 12:13:00 -05:00
James Agnew
60f16dd91d
Update to 4.3.x core JAR (#1715) 
* Added optionality for adding resource fetcher

* Added coverage that proves invocations

* Bumped version of fhir.core to latest version. Added wrapping of AssumeValidRestReferences

* Added optionality for adding resource fetcher

* Added coverage that proves invocations

* Bumped version of fhir.core to latest version. Added wrapping of AssumeValidRestReferences

* Start working on converter

* Account for compile errors

* Test fix

* Work no validator

* Work on getting core working

* Add some test coverage

* Many test fixes

Co-authored-by: Jens Kristian Villadsen <46567685+jvitrifork@users.noreply.github.com>
 2020-02-17 14:28:29 -05:00
jamesagnew
ddc7b601ee Version bump to 4.3.0-SNAPSHOT 2020-02-16 19:23:22 -05:00
jamesagnew
4fd80cfca7 Bump to 4.2.0 2020-02-16 19:00:15 -05:00
Ken Stevens
da11d3d89e
remove distinct from search (#1712) 
* it works now

* oops

* add successful migration message

* add successful migration message

* Add fix for #1300

* Remove FIXME

* Test fix

* Test fix

Co-authored-by: James Agnew <jamesagnew@gmail.com>
 2020-02-15 12:45:59 -05:00
jamesagnew
1d1aadb813 Work on multitenancy 2020-02-09 20:57:50 -05:00
James Agnew
ebf395bee9 Merge branch 'master' into ja_20200206_multitenancy 2020-02-09 08:40:29 -05:00