mirror of
https://github.com/hapifhir/hapi-fhir.git
synced 2025-02-13 08:25:00 +00:00
5831cbedf5
* Add unit tests and supporting classes from gitlab issue. * Commit with changes thus far to be reviewed. Namely, add savepoint capabilities to HapiTransactionService, inject HapiTransactionService into CascadingDeleteInterceptor, add savepoint capabilities to the TransactionDetails, and catch an Exception in BaseHapiFhirResourceDao.delete() then rollback to the checkpoint. * Fix compile error. * hapi transaction service test * hapi transaction service test * hapi transaction service test * First draft of RetryTemplate and flush() logic. Try unit testing with PointcutLatch. * hapi transaction service test * Latest changes including moving RetryTemplate, cleaning up unit tests. * First attempt at correct design. Fix compile errors. * Add failed rollback savepoint test. * fix propogation * interesting test failure in SafeDeleterTest * Latest code * move delete * test passing * all tests pass * yay we're done just cleanup * First round of cleanup: Get rid of all exploratory logging, remove unneeded dependencies, move creation of RetryTemplate to SafeDeleter. * More cleanup. Add changelog. * Bump to 6.2.0-PRE13-SNAPSHOT. * Code review feedback: Refactor SafeDeleter to a service and bean. Add comments. * Code review feedback: Comments on unit test assertions. * Code review feedback: Rename SafeDeleterSvc to ThreadSafeResourceDeleterSvc. Add javadoc. Add logger to DelayListener. Remove useless commented out code. * Fix unit test failure in CascadingDeleteInterceptorTest. Co-authored-by: Ken Stevens <ken@smilecdr.com>
435 lines
15 KiB
XML
435 lines
15 KiB
XML
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<parent>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-deployable-pom</artifactId>
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<version>6.2.0-PRE13-SNAPSHOT</version>
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<relativePath>../hapi-deployable-pom/pom.xml</relativePath>
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</parent>
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<artifactId>hapi-fhir-structures-dstu2</artifactId>
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<packaging>bundle</packaging>
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<name>HAPI FHIR Structures - DSTU2 (FHIR v1.0.0)</name>
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<dependencies>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-base</artifactId>
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<version>${project.version}</version>
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</dependency>
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<!--
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Test dependencies on other optional parts of HAPI
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-->
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<dependency>
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<groupId>com.fasterxml.woodstox</groupId>
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<artifactId>woodstox-core</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-validation-resources-dstu2</artifactId>
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<version>${project.version}</version>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-client</artifactId>
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<version>${project.version}</version>
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<optional>true</optional>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-server</artifactId>
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<version>${project.version}</version>
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<optional>true</optional>
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</dependency>
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<dependency>
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<groupId>javax.servlet</groupId>
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<artifactId>javax.servlet-api</artifactId>
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<scope>provided</scope>
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</dependency>
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<!-- Testing -->
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<!-- <dependency> <groupId>ca.uhn.hapi.fhir</groupId> <artifactId>hapi-fhir-structures-dstu</artifactId> <version>0.8</version> <scope>test</scope> </dependency> -->
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<dependency>
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<groupId>org.xmlunit</groupId>
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<artifactId>xmlunit-core</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-servlets</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-server</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-servlet</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-util</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-webapp</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-http</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>ch.qos.logback</groupId>
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<artifactId>logback-classic</artifactId>
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<optional>true</optional>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.thymeleaf</groupId>
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<artifactId>thymeleaf</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-test-utilities</artifactId>
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<version>${project.version}</version>
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<scope>test</scope>
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</dependency>
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<!-- Dependencies for Schematron -->
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<dependency>
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<groupId>com.helger</groupId>
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<artifactId>ph-schematron</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>javax.activation</groupId>
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<artifactId>javax.activation-api</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>javax.xml.bind</groupId>
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<artifactId>jaxb-api</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.glassfish.jaxb</groupId>
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<artifactId>jaxb-runtime</artifactId>
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<scope>test</scope>
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</dependency>
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<!-- UNIT TEST DEPENDENCIES -->
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<dependency>
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<groupId>org.junit-pioneer</groupId>
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<artifactId>junit-pioneer</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>net.sf.json-lib</groupId>
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<artifactId>json-lib</artifactId>
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<!-- <version>2.4</version> -->
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<classifier>jdk15</classifier>
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<scope>test</scope>
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<exclusions>
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<exclusion>
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<artifactId>commons-logging</artifactId>
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<groupId>commons-logging</groupId>
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</exclusion>
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<exclusion>
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<artifactId>commons-lang</artifactId>
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<groupId>commons-lang</groupId>
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</exclusion><!-- <exclusion> <artifactId>ezmorph</artifactId> <groupId>net.sf.ezmorph</groupId> </exclusion> -->
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</exclusions>
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</dependency>
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<dependency>
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<groupId>net.sf.json-lib</groupId>
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<artifactId>json-lib</artifactId>
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<!-- <version>2.4</version> -->
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<classifier>jdk15-sources</classifier>
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<scope>test</scope>
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<exclusions>
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<exclusion>
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<artifactId>commons-logging</artifactId>
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<groupId>commons-logging</groupId>
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</exclusion>
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<exclusion>
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<artifactId>commons-lang</artifactId>
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<groupId>commons-lang</groupId>
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</exclusion><!-- <exclusion> <artifactId>ezmorph</artifactId> <groupId>net.sf.ezmorph</groupId> </exclusion> -->
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</exclusions>
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</dependency>
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<dependency>
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<artifactId>commons-lang</artifactId>
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<groupId>commons-lang</groupId>
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<version>2.5</version>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>directory-naming</groupId>
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<artifactId>naming-java</artifactId>
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<!-- <version>0.8</version> -->
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<scope>test</scope>
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<exclusions>
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<exclusion>
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<artifactId>commons-logging</artifactId>
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<groupId>commons-logging</groupId>
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</exclusion>
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</exclusions>
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</dependency>
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<dependency>
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<groupId>com.google.guava</groupId>
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<artifactId>guava</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-web</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.awaitility</groupId>
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<artifactId>awaitility</artifactId>
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<scope>test</scope>
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</dependency>
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</dependencies>
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<build>
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<plugins>
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-surefire-plugin</artifactId>
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<configuration>
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<argLine>@{argLine} ${surefire_jvm_args}</argLine>
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</configuration>
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</plugin>
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<plugin>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-tinder-plugin</artifactId>
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<version>${project.version}</version>
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<executions>
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<execution>
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<id>generate</id>
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<goals>
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<goal>generate-structures</goal>
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</goals>
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<configuration>
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<baseResourceNames>
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<baseResourceName>account</baseResourceName>
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<baseResourceName>allergyintolerance</baseResourceName>
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<baseResourceName>appointment</baseResourceName>
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<baseResourceName>appointmentresponse</baseResourceName>
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<baseResourceName>auditevent</baseResourceName>
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<baseResourceName>basic</baseResourceName>
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<baseResourceName>binary</baseResourceName>
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<baseResourceName>bodysite</baseResourceName>
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<baseResourceName>bundle</baseResourceName>
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<baseResourceName>careplan</baseResourceName>
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<baseResourceName>claim</baseResourceName>
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<baseResourceName>claimresponse</baseResourceName>
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<baseResourceName>clinicalimpression</baseResourceName>
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<baseResourceName>communication</baseResourceName>
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<baseResourceName>communicationrequest</baseResourceName>
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<baseResourceName>composition</baseResourceName>
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<baseResourceName>conceptmap</baseResourceName>
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<baseResourceName>condition</baseResourceName>
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<baseResourceName>conformance</baseResourceName>
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<baseResourceName>contract</baseResourceName>
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<baseResourceName>coverage</baseResourceName>
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<baseResourceName>dataelement</baseResourceName>
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<baseResourceName>detectedissue</baseResourceName>
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<baseResourceName>device</baseResourceName>
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<baseResourceName>devicecomponent</baseResourceName>
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<baseResourceName>devicemetric</baseResourceName>
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<baseResourceName>deviceuserequest</baseResourceName>
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<baseResourceName>deviceusestatement</baseResourceName>
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<baseResourceName>diagnosticorder</baseResourceName>
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<baseResourceName>diagnosticreport</baseResourceName>
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<!-- This is not a real resource <baseResourceName>documentation</baseResourceName> -->
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<baseResourceName>documentmanifest</baseResourceName>
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<baseResourceName>documentreference</baseResourceName>
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<baseResourceName>eligibilityrequest</baseResourceName>
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<baseResourceName>eligibilityresponse</baseResourceName>
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<baseResourceName>encounter</baseResourceName>
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<baseResourceName>enrollmentrequest</baseResourceName>
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<baseResourceName>enrollmentresponse</baseResourceName>
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<baseResourceName>episodeofcare</baseResourceName>
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<baseResourceName>explanationofbenefit</baseResourceName>
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<baseResourceName>familymemberhistory</baseResourceName>
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<baseResourceName>flag</baseResourceName>
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<baseResourceName>goal</baseResourceName>
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<baseResourceName>group</baseResourceName>
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<baseResourceName>healthcareservice</baseResourceName>
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<baseResourceName>imagingobjectselection</baseResourceName>
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<baseResourceName>imagingstudy</baseResourceName>
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<baseResourceName>immunization</baseResourceName>
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<baseResourceName>immunizationrecommendation</baseResourceName>
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<baseResourceName>implementationguide</baseResourceName>
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<baseResourceName>list</baseResourceName>
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<baseResourceName>location</baseResourceName>
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<baseResourceName>media</baseResourceName>
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<baseResourceName>medication</baseResourceName>
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<baseResourceName>medicationadministration</baseResourceName>
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<baseResourceName>medicationdispense</baseResourceName>
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<baseResourceName>medicationorder</baseResourceName>
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<baseResourceName>medicationstatement</baseResourceName>
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<baseResourceName>messageheader</baseResourceName>
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<baseResourceName>namingsystem</baseResourceName>
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<baseResourceName>nutritionorder</baseResourceName>
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<baseResourceName>observation</baseResourceName>
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<baseResourceName>operationdefinition</baseResourceName>
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<baseResourceName>operationoutcome</baseResourceName>
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<baseResourceName>order</baseResourceName>
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<baseResourceName>orderresponse</baseResourceName>
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<baseResourceName>organization</baseResourceName>
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<baseResourceName>parameters</baseResourceName>
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<baseResourceName>patient</baseResourceName>
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<baseResourceName>paymentnotice</baseResourceName>
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<baseResourceName>paymentreconciliation</baseResourceName>
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<baseResourceName>person</baseResourceName>
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<baseResourceName>practitioner</baseResourceName>
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<baseResourceName>procedure</baseResourceName>
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<baseResourceName>procedurerequest</baseResourceName>
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<baseResourceName>processrequest</baseResourceName>
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<baseResourceName>processresponse</baseResourceName>
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<baseResourceName>provenance</baseResourceName>
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<baseResourceName>questionnaire</baseResourceName>
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<baseResourceName>questionnaireresponse</baseResourceName>
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<baseResourceName>referralrequest</baseResourceName>
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<baseResourceName>relatedperson</baseResourceName>
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<baseResourceName>riskassessment</baseResourceName>
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<baseResourceName>schedule</baseResourceName>
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<baseResourceName>searchparameter</baseResourceName>
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<baseResourceName>slot</baseResourceName>
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<baseResourceName>specimen</baseResourceName>
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<baseResourceName>structuredefinition</baseResourceName>
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<baseResourceName>subscription</baseResourceName>
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<baseResourceName>substance</baseResourceName>
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<baseResourceName>supplydelivery</baseResourceName>
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<baseResourceName>supplyrequest</baseResourceName>
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<!--
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Removed in HAPI 2.4 as this isn't a real resource
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<baseResourceName>supportingdocumentation</baseResourceName>
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<baseResourceName>test</baseResourceName>
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-->
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<baseResourceName>testscript</baseResourceName>
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<!-- Removed in HAPI 3.4.0 as this isn't a real resource
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<baseResourceName>user</baseResourceName>
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-->
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<baseResourceName>valueset</baseResourceName>
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<baseResourceName>visionprescription</baseResourceName>
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</baseResourceNames>
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<package>ca.uhn.fhir.model.dstu2</package>
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<version>dstu2</version>
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<buildDatatypes>true</buildDatatypes>
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<packageName>ca.uhn.fhir.model.dstu2</packageName>
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</configuration>
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</execution>
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<!-- <execution> <id>clean_source</id> <goals> <goal>minimize-resources</goal> </goals> <configuration> <fhirVersion>DSTU2</fhirVersion> <targetDirectory>${project.baseDir}/../hapi-tinder-plugin/</targetDirectory>
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</configuration> </execution> -->
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</executions>
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</plugin>
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<plugin>
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<groupId>org.codehaus.mojo</groupId>
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<artifactId>build-helper-maven-plugin</artifactId>
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<executions>
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<execution>
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<id>add-source</id>
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<phase>generate-sources</phase>
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<goals>
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<goal>add-source</goal>
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</goals>
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<configuration>
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<sources>
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<source>target/generated-sources/tinder</source>
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</sources>
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</configuration>
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</execution>
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</executions>
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</plugin>
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<plugin>
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<groupId>org.apache.felix</groupId>
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<artifactId>maven-bundle-plugin</artifactId>
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<extensions>true</extensions>
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<configuration>
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<instructions>
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<_nouses>true</_nouses>
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<_removeheaders>Built-By, Include-Resource, Private-Package, Require-Capability</_removeheaders>
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<!-- No need to disable normal OSGi class loading
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<Fragment-Host>
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ca.uhn.hapi.fhir.hapi-fhir-base
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</Fragment-Host>
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-->
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<Import-Package>
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javax.servlet*;resolution:=optional,
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*
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</Import-Package>
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</instructions>
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</configuration>
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</plugin>
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</plugins>
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<pluginManagement>
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<plugins>
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<!--This plugin's configuration is used to store Eclipse m2e settings only. It has no influence on the Maven build itself. -->
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<plugin>
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<groupId>org.eclipse.m2e</groupId>
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<artifactId>lifecycle-mapping</artifactId>
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<version>1.0.0</version>
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<configuration>
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<lifecycleMappingMetadata>
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<pluginExecutions>
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<pluginExecution>
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<pluginExecutionFilter>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-tinder-plugin</artifactId>
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<versionRange>[0.4-SNAPSHOT,)</versionRange>
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<goals>
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<goal>generate-structures</goal>
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</goals>
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</pluginExecutionFilter>
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<action>
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<ignore></ignore>
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</action>
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</pluginExecution>
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</pluginExecutions>
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</lifecycleMappingMetadata>
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</configuration>
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</plugin>
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</plugins>
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</pluginManagement>
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<resources>
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<resource>
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<directory>${basedir}/src/main/resources</directory>
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</resource>
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<resource>
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<directory>${basedir}/target/generated-resources/tinder</directory>
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</resource>
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</resources>
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</build>
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<reporting>
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<plugins>
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-javadoc-plugin</artifactId>
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<configuration>
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</configuration>
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</plugin>
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</plugins>
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</reporting>
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</project>
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