🔥 HAPI FHIR - Java API for HL7 FHIR Clients and Servers
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Ken Stevens f5dfc3a5ed
New reindex spring batch operation (#2845)
* first sweep to add new $reindex job

* first cut done.  next up integration test.

* start roughing out reindex everything

* Failing test

* test passes

* add BundleUtil helper method

* rough in processEverything

* rough in processEverything

* fix mock test

* merge master

* Make BaseJpaTest.mySrd lenient.

* fix test

* reindex everything works with FIXMEs

* reindex everything more tests

* moar tests

* moar tests

* fix test

* fix test

* fix regression and fix test

* fix test cycle

* fixme

* fix test

* test provider layer

* reindex everything partition aware

* yay last fixme!

* run reindex in partitioned threads

* add fixmes for areas that require extra testing

* added transaction and log message

* manual integration testing

* changelog

* reindex all partitions

* bump hapi version

* fix test

* moar test

* pre-review cleanup

* fix javadoc

* review feedback

* review feedback

* review feedback

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2845-reindex-operation.yaml

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* review feedback

* review feedback

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/delete/job/ReindexJobTest.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/delete/job/ReindexJobTest.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/MultitenantBatchOperationR4Test.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/MultitenantBatchOperationR4Test.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/ResourceSearch.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-server/src/main/java/ca/uhn/fhir/rest/api/server/storage/IDeleteExpungeJobSubmitter.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
2021-07-29 19:18:49 -04:00
.github Add CapabilityStatement customizer (#2387) 2021-02-15 14:58:34 -05:00
.mvn_/wrapper Bump core to latest versions (#2154) 2020-11-03 15:43:37 -05:00
example-projects Add implementation. Add test. Add changelog 2021-05-11 10:31:29 -04:00
hapi-deployable-pom New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-android New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-android-realm Work on JPA 2017-02-02 06:23:28 -05:00
hapi-fhir-base New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-bom New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-cli New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-client New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-client-okhttp New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-converter New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-dist New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-docs New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jacoco New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jaxrsserver-base New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jaxrsserver-example New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-api New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-base New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-batch New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-cql New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-mdm New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-migrate New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-model New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-searchparam New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-subscription New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-test-utilities New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-jpaserver-uhnfhirtest New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-narrativegenerator Migrate to JUnit5 (#1952) 2020-07-04 18:28:16 -04:00
hapi-fhir-oauth2 Replacing Hibernate Search 5 with Hibernate Search 6 (#2190) 2021-01-05 17:56:59 -05:00
hapi-fhir-server New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-server-mdm New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-server-openapi New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-spring-boot New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-structures-dstu Add CapabilityStatement customizer (#2387) 2021-02-15 14:58:34 -05:00
hapi-fhir-structures-dstu2 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-structures-dstu2.1 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-structures-dstu3 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-structures-hl7org-dstu2 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-structures-r4 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-structures-r5 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-test-utilities New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-testpage-interceptor remove .settings .project .classpath file of eclipse 2017-01-28 17:13:47 +01:00
hapi-fhir-testpage-overlay New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-validation New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-validation-resources-dstu2 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-validation-resources-dstu2.1 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-validation-resources-dstu3 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-validation-resources-r4 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-fhir-validation-resources-r5 New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-tinder-plugin New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
hapi-tinder-test New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
osgi 2540 - Upgraded the fhir_core_version from 5.3.0 to 5.3.10 (#2545) 2021-04-29 15:00:37 -04:00
restful-server-example New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
src ValueSet Expansion Should Preserve Order (#2724) 2021-06-16 07:20:59 -04:00
tests New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
vagrant Update old removed Chef syntax in Vagrant provision 2019-01-31 05:17:22 -05:00
.editorconfig Add framework for Bulk Import (#2538) 2021-04-14 17:41:32 -04:00
.gitignore Merge CQL Initial Implementation Into master (#2330) 2021-01-29 16:35:38 -05:00
.whitesource Add .whitesource configuration file 2021-04-29 13:42:31 +00:00
HELPWANTED.md Work on custom params 2017-02-02 20:37:58 -05:00
LICENSE.txt Add license and notice files 2015-03-25 22:32:32 -04:00
LOINC_NOTES.txt More work on loinc 2018-03-19 08:51:02 -04:00
NOTICE.txt Add license and notice files 2015-03-25 22:32:32 -04:00
README.md Add CapabilityStatement customizer (#2387) 2021-02-15 14:58:34 -05:00
azure-pipelines.yml Try to avoid codecov fluctuations (#2344) 2021-02-03 09:44:57 -05:00
check_for_maven_updates.sh Fix up examples 2014-09-03 18:03:44 -04:00
lgtm.yml Credit for #2623 2021-05-02 17:20:16 -04:00
list_releases.sh Implement handleException on the server interceptor framework, as well 2014-11-07 14:26:59 -05:00
mvnw Add maven wrapper for easier and more coherent builds https://www.baeldung.com/maven-wrapper 2018-11-15 15:36:57 +02:00
mvnw.cmd Use windows line-endings in mvnw.cmd 2019-01-11 17:11:53 +02:00
pom.xml New reindex spring batch operation (#2845) 2021-07-29 19:18:49 -04:00
snapshot-pipeline.yml Skip tests 2021-01-25 14:31:36 -05:00
sync.sh Update resource defs 2015-12-01 18:35:24 -05:00
sync_dstu3.sh Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-01 14:31:25 -04:00
sync_ri.sh Bump to 1.0.2 FHIR definitions 2015-11-15 12:22:56 -05:00
sync_ri3.fish Bring DSTU3 structs up to FHIR R3 2017-04-18 07:48:38 -04:00
sync_ri3.sh Syn RI - Build still failing :( 2016-05-28 12:53:59 -04:00
sync_ri4.sh Squashed commit of the following: 2018-12-27 17:58:47 -05:00
sync_ri5.sh Bump core to latest versions (#2154) 2020-11-03 15:43:37 -05:00
sync_ri21.sh Update model and definitions to latest definitions 2016-01-30 11:08:16 -05:00
update_version.sh Force another travis build 2015-08-05 10:38:38 -04:00

README.md

HAPI FHIR

HAPI FHIR - Java API for HL7 FHIR Clients and Servers

License

CI/CD

CI Status (master) SNAPSHOT Pipeline Current Release
Build Status Build Status Release Artifacts

Test Coverage

codecov

Documentation and wiki

Complete project documentation is available here: http://hapifhir.io

A demonstration of this project is available here: http://hapi.fhir.org/

This project is Open Source, licensed under the Apache Software License 2.0.

Please see this wiki page for information on where to get help with HAPI FHIR.

Please see Smile CDR for information on commercial support.