org.hl7.fhir.core/pom.xml

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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
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<parent>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-deployable-pom</artifactId>
<version>5.4.0</version>
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</parent>
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<!--
Note: Version of this project and the version of HAPI FHIR are not locked to
each other. It is fine to bump the point version of this POM without affecting
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HAPI FHIR
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-->
<artifactId>org.hl7.fhir.core</artifactId>
<version>5.6.83-SNAPSHOT</version>
<packaging>pom</packaging>
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<properties>
<hapi_fhir_version>5.4.0</hapi_fhir_version>
<validator_test_case_version>1.1.127</validator_test_case_version>
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<junit_jupiter_version>5.7.1</junit_jupiter_version>
Feature - run JUnit tests from validator_cli (#835) * WIP add initial test running code * Importing test modules fix breaking tests 1 * Clean up pom dependencies, move execution before context load * Re-org and document cli pom * Set more dependencies to compile. Print entries in classpath * Try running via internal Executors * Clearer class names + provide clear output * Clean up test summarys and output + update class regex to junit default * Refactor to avoid having to extend class * Trim down dependency additions in pom + javadoc * Add the rest of the modules to TestExecutor * Parse additional params for classname filter and module * Add experimental JUnit 4 runner in case JUnit 5 hates us. * Include JUnit4 tests via adapters. Need to refactor for better naming. * Update LoadIgTests to JUnit 5 * Gentle refactor, print execution time * Remove unnecessary interface, organize packages * Remove cached resources (need to fix this) * Allow setting of txCache globally for tests + fix r5 tests * Mild refactor of TestExecutor + Reorder test execution * Add fhirTestCasesDirectory to testConfig + get r4 tests working * Add dstu2016may and dstu3 tests * Add dstu2 tests * Add convertors tests * Refactor resourceNameForFile + don't copy existing files * Get all txCache directories centrally and allow all to live in same dir * Start extracting txCache resources * Finish extracting txCache resources * Fix failing GraphQLEngineTest * Try an mvn install for the pull pipeline * Clean and refactor * Test coverage * Fix GraphQLEngineTests for local jar run * More refactoring, more tests * Add bare test for TxCacheResourceExtractor Co-authored-by: dotasek <david.otasek@smilecdr.com>
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<junit_platform_launcher_version>1.8.2</junit_platform_launcher_version>
<maven_surefire_version>3.0.0-M5</maven_surefire_version>
<maven_clean_version>3.1.0</maven_clean_version>
<jacoco_version>0.8.7</jacoco_version>
<info_cqframework_version>1.5.1</info_cqframework_version>
<lombok_version>1.18.22</lombok_version>
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<byte_buddy_version>1.10.21</byte_buddy_version>
<apache_poi_version>4.1.1</apache_poi_version>
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</properties>
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<name>HL7 Core Artifacts</name>
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<organization>
<name>Health Level 7</name>
<url>http://hl7.org</url>
</organization>
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<modules>
<module>org.hl7.fhir.utilities</module>
<module>org.hl7.fhir.dstu2</module>
<module>org.hl7.fhir.dstu2016may</module>
<module>org.hl7.fhir.dstu3</module>
<module>org.hl7.fhir.r4</module>
<module>org.hl7.fhir.r4b</module>
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<module>org.hl7.fhir.r5</module>
<module>org.hl7.fhir.convertors</module>
<module>org.hl7.fhir.validation</module>
<module>org.hl7.fhir.validation.cli</module>
<!-- The report project exists only to aggregate the test results from the other projects into a central report. -->
<module>org.hl7.fhir.report</module>
</modules>
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<repositories>
<repository>
<id>jitpack.io</id>
<url>https://jitpack.io</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</repository>
<repository>
<id>github-releases</id>
<url>https://maven.pkg.github.com/FHIR/fhir-test-cases/</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</repository>
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</repositories>
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<dependencies>
<!-- Use logback for tests -->
<dependency>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-classic</artifactId>
<version>1.2.3</version>
<scope>test</scope>
</dependency>
</dependencies>
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<dependencyManagement>
<dependencies>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-base</artifactId>
<version>${hapi_fhir_version}</version>
<exclusions>
<exclusion>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-utilities</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>org.hl7.fhir.utilities</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-structures-r4</artifactId>
<version>${hapi_fhir_version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-validation-resources-r4</artifactId>
<version>${hapi_fhir_version}</version>
</dependency>
<dependency>
<groupId>com.atlassian.commonmark</groupId>
<artifactId>commonmark</artifactId>
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<version>0.17.0</version>
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</dependency>
<dependency>
<groupId>com.atlassian.commonmark</groupId>
<artifactId>commonmark-ext-gfm-tables</artifactId>
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<version>0.17.0</version>
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</dependency>
<dependency>
<groupId>com.github.rjeschke</groupId>
<artifactId>txtmark</artifactId>
<version>0.13</version>
</dependency>
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<dependency>
<groupId>org.junit.platform</groupId>
<artifactId>junit-platform-launcher</artifactId>
<version>${junit_platform_launcher_version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-engine</artifactId>
<version>${junit_jupiter_version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.vintage</groupId>
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<artifactId>junit-vintage-engine</artifactId>
<version>${junit_jupiter_version}</version>
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<scope>test</scope>
</dependency>
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<dependency>
<groupId>net.bytebuddy</groupId>
<artifactId>byte-buddy</artifactId>
<version>${byte_buddy_version}</version>
<scope>test</scope>
</dependency>
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</dependencies>
</dependencyManagement>
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<build>
<plugins>
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<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-enforcer-plugin</artifactId>
<configuration>
<skip>true</skip>
</configuration>
</plugin>
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<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.8.0</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
<forceJavacCompilerUse>false</forceJavacCompilerUse>
<encoding>UTF-8</encoding>
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<!-- Allows running the compiler in a separate process. If false it uses the built in compiler,
while if true it will use an executable. -->
<fork>true</fork>
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<meminitial>512m</meminitial>
<maxmem>4000m</maxmem>
<debug>true</debug>
</configuration>
<executions>
<!-- Replacing default-compile as it is treated specially by maven -->
<execution>
<id>default-compile</id>
<phase>none</phase>
</execution>
<!-- Replacing default-testCompile as it is treated specially by maven -->
<execution>
<id>default-testCompile</id>
<phase>none</phase>
</execution>
<execution>
<id>java-compile</id>
<phase>compile</phase>
<goals> <goal>compile</goal> </goals>
</execution>
<execution>
<id>java-test-compile</id>
<phase>test-compile</phase>
<goals> <goal>testCompile</goal> </goals>
</execution>
</executions>
Feature - run JUnit tests from validator_cli (#835) * WIP add initial test running code * Importing test modules fix breaking tests 1 * Clean up pom dependencies, move execution before context load * Re-org and document cli pom * Set more dependencies to compile. Print entries in classpath * Try running via internal Executors * Clearer class names + provide clear output * Clean up test summarys and output + update class regex to junit default * Refactor to avoid having to extend class * Trim down dependency additions in pom + javadoc * Add the rest of the modules to TestExecutor * Parse additional params for classname filter and module * Add experimental JUnit 4 runner in case JUnit 5 hates us. * Include JUnit4 tests via adapters. Need to refactor for better naming. * Update LoadIgTests to JUnit 5 * Gentle refactor, print execution time * Remove unnecessary interface, organize packages * Remove cached resources (need to fix this) * Allow setting of txCache globally for tests + fix r5 tests * Mild refactor of TestExecutor + Reorder test execution * Add fhirTestCasesDirectory to testConfig + get r4 tests working * Add dstu2016may and dstu3 tests * Add dstu2 tests * Add convertors tests * Refactor resourceNameForFile + don't copy existing files * Get all txCache directories centrally and allow all to live in same dir * Start extracting txCache resources * Finish extracting txCache resources * Fix failing GraphQLEngineTest * Try an mvn install for the pull pipeline * Clean and refactor * Test coverage * Fix GraphQLEngineTests for local jar run * More refactoring, more tests * Add bare test for TxCacheResourceExtractor Co-authored-by: dotasek <david.otasek@smilecdr.com>
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</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>3.2.0</version>
<executions>
<execution>
<goals>
<goal>test-jar</goal>
</goals>
</execution>
</executions>
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</plugin>
<plugin>
<groupId>org.basepom.maven</groupId>
<artifactId>duplicate-finder-maven-plugin</artifactId>
<executions>
<execution>
<id>default</id>
<phase>verify</phase>
<goals>
<goal>check</goal>
</goals>
<inherited>true</inherited>
</execution>
</executions>
<configuration>
<printEqualFiles>false</printEqualFiles>
<failBuildInCaseOfDifferentContentConflict>true</failBuildInCaseOfDifferentContentConflict>
<failBuildInCaseOfEqualContentConflict>true</failBuildInCaseOfEqualContentConflict>
<failBuildInCaseOfConflict>true</failBuildInCaseOfConflict>
<checkCompileClasspath>true</checkCompileClasspath>
<checkRuntimeClasspath>false</checkRuntimeClasspath>
<checkTestClasspath>false</checkTestClasspath>
<skip>false</skip>
<quiet>false</quiet>
<preferLocal>true</preferLocal>
<useResultFile>true</useResultFile>
<resultFileMinClasspathCount>2</resultFileMinClasspathCount>
<resultFile>${project.build.directory}/duplicate-finder-result.xml</resultFile>
<ignoredDependencies>
<dependency>
<groupId>javax.el</groupId>
<artifactId>javax.el-api</artifactId>
</dependency>
<dependency>
<groupId>javax.mail</groupId>
<artifactId>javax.mail-api</artifactId>
</dependency>
<dependency>
<groupId>javax.activation</groupId>
<artifactId>javax.activation-api</artifactId>
</dependency>
<dependency>
<groupId>com.helger</groupId>
<artifactId>ph-schematron</artifactId>
</dependency>
<dependency>
<groupId>commons-logging</groupId>
<artifactId>commons-logging</artifactId>
</dependency>
<dependency>
<groupId>org.jscience</groupId>
<artifactId>jscience</artifactId>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-jcl</artifactId>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-jcl</artifactId>
</dependency>
<dependency>
<groupId>com.google.code.findbugs</groupId>
<artifactId>annotations</artifactId>
</dependency>
<dependency>
<groupId>org.apache.derby</groupId>
<artifactId>derbyclient</artifactId>
</dependency>
<dependency>
<groupId>org.apache.derby</groupId>
<artifactId>derbynet</artifactId>
</dependency>
<dependency>
<groupId>org.apache.derby</groupId>
<artifactId>derbyclient</artifactId>
</dependency>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>ooxml-schemas</artifactId>
</dependency>
</ignoredDependencies>
<ignoredResourcePatterns>
<ignoredResourcePattern>changelog.txt</ignoredResourcePattern>
<ignoredResource>javac.bat</ignoredResource>
<ignoredResource>javac.sh</ignoredResource>
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<ignoredResource>about.html</ignoredResource>
<ignoredResource>changelog.xml</ignoredResource>
</ignoredResourcePatterns>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<extensions>true</extensions>
<configuration>
<instructions>
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<_nouses>true</_nouses>
<_removeheaders>Built-By, Include-Resource, Private-Package, Require-Capability</_removeheaders>
<!-- No need to disable normal OSGi class loading
<Fragment-Host>
ca.uhn.hapi.fhir.hapi-fhir-base
</Fragment-Host>
-->
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</instructions>
</configuration>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>license-maven-plugin</artifactId>
<configuration>
<skipUpdateLicense>true</skipUpdateLicense>
</configuration>
</plugin>
<plugin>
<groupId>org.jacoco</groupId>
<artifactId>jacoco-maven-plugin</artifactId>
<version>${jacoco_version}</version>
<configuration>
<excludes>
<!-- These are auto-generated files that will exceed the JVM limit on file size.
If these are not excluded, Jacoco complains and won't run the validator tests. -->
<exclude>org/hl7/fhir/r5/terminologies/JurisdictionUtilities</exclude>
<exclude>org/hl7/fhir/r5/formats/JsonParser</exclude>
<exclude>org/hl7/fhir/r5/formats/XmlParser</exclude>
<exclude>org/hl7/fhir/r4b/formats/JsonParser</exclude>
<exclude>org/hl7/fhir/r4b/formats/XmlParser</exclude>
<exclude>org/hl7/fhir/r4/formats/JsonParser</exclude>
<exclude>org/hl7/fhir/r4/formats/XmlParser</exclude>
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<exclude>org/hl7/fhir/r4/**/*</exclude>
<exclude>org/hl7/fhir/dstu3/**/*</exclude>
<exclude>org/hl7/fhir/dstu2/**/*</exclude>
<exclude>org/hl7/fhir/dstu2016may/**/*</exclude>
</excludes>
</configuration>
<executions>
<execution>
<id>jacoco-initialize</id>
<goals>
<goal>prepare-agent</goal>
</goals>
</execution>
<execution>
<id>report</id>
<phase>package</phase>
<goals>
<goal>report</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-deploy-plugin</artifactId>
</plugin>
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</plugins>
</build>
<profiles>
<profile>
<id>surefire-java-8</id>
<activation>
<jdk>(,1.8]</jdk>
</activation>
<build>
<plugins>
<plugin>
<artifactId>maven-surefire-plugin</artifactId>
<version>${maven_surefire_version}</version>
<configuration>
<forkCount>1</forkCount>
<reuseForks>true</reuseForks>
<parallel>classes</parallel>
<trimStackTrace>false</trimStackTrace>
<testFailureIgnore>false</testFailureIgnore>
<!-- We need to include the ${argLine} here so the Jacoco test arguments are included in the
Surefire testing run. This may appear as an error in some IDEs, but it will run regardless.
-->
<!-- UseConcMarkSweepGC is required for Java 8 builds, or else garbage collection will fail
for forked tests -->
<argLine>${argLine} -Xmx4096m -XX:+UseConcMarkSweepGC</argLine>
<redirectTestOutputToFile>false</redirectTestOutputToFile>
</configuration>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>surefire-java-9-plus</id>
<activation>
<jdk>[9,)</jdk>
</activation>
<build>
<plugins>
<plugin>
<artifactId>maven-surefire-plugin</artifactId>
<version>${maven_surefire_version}</version>
<configuration>
<forkCount>1</forkCount>
<reuseForks>true</reuseForks>
<parallel>classes</parallel>
<trimStackTrace>false</trimStackTrace>
<testFailureIgnore>false</testFailureIgnore>
<!-- We need to include the ${argLine} here so the Jacoco test arguments are included in the
Surefire testing run. This may appear as an error in some IDEs, but it will run regardless.
-->
<argLine>${argLine} -Xmx4096m</argLine>
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<systemPropertyVariables>
<java.locale.providers>COMPAT</java.locale.providers>
</systemPropertyVariables>
<redirectTestOutputToFile>false</redirectTestOutputToFile>
</configuration>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>github-repo</id>
<activation>
<activeByDefault>false</activeByDefault>
<property>
<name>deployToGitHub</name>
</property>
</activation>
<distributionManagement>
<snapshotRepository>
<id>github</id>
<url>https://maven.pkg.github.com/hapifhir/org.hl7.fhir.core</url>
</snapshotRepository>
<repository>
<id>github</id>
<url>https://maven.pkg.github.com/hapifhir/org.hl7.fhir.core</url>
</repository>
</distributionManagement>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-gpg-plugin</artifactId>
<version>1.6</version>
<executions>
<execution>
<id>sign-artifacts</id>
<phase>verify</phase>
<goals>
<goal>sign</goal>
</goals>
<configuration>
<keyname>${gpg.keyname}</keyname>
<passphraseServerId>${gpg.keyname}</passphraseServerId>
<gpgArguments>
<arg>--pinentry-mode</arg>
<arg>loopback</arg>
</gpgArguments>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>ossrh-repo</id>
<activation>
<activeByDefault>false</activeByDefault>
<property>
<name>deployToSonatype</name>
</property>
</activation>
<distributionManagement>
<snapshotRepository>
<id>ossrh</id>
<url>https://oss.sonatype.org/content/repositories/snapshots</url>
</snapshotRepository>
<repository>
<id>ossrh</id>
<url>https://oss.sonatype.org/service/local/staging/deploy/maven2/</url>
</repository>
</distributionManagement>
<build>
<plugins>
<plugin>
<groupId>org.sonatype.plugins</groupId>
<artifactId>nexus-staging-maven-plugin</artifactId>
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<version>1.6.8</version>
<extensions>true</extensions>
<configuration>
<serverId>ossrh</serverId>
<nexusUrl>https://oss.sonatype.org/</nexusUrl>
<autoReleaseAfterClose>true</autoReleaseAfterClose>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-gpg-plugin</artifactId>
<version>1.6</version>
<executions>
<execution>
<id>sign-artifacts</id>
<phase>verify</phase>
<goals>
<goal>sign</goal>
</goals>
<configuration>
<keyname>${gpg.keyname}</keyname>
<passphraseServerId>${gpg.keyname}</passphraseServerId>
<gpgArguments>
<arg>--pinentry-mode</arg>
<arg>loopback</arg>
</gpgArguments>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>cleanTxCache</id>
<activation>
<activeByDefault>false</activeByDefault>
<property>
<name>fhir.txcache.clean</name>
<value>true</value>
</property>
</activation>
<build>
<plugins>
<plugin>
<artifactId>maven-clean-plugin</artifactId>
<version>${maven_clean_version}</version>
<configuration>
<filesets>
<fileset>
<directory>src/test/resources/txCache</directory>
<includes>
<include>**/*</include>
</includes>
<followSymlinks>false</followSymlinks>
</fileset>
</filesets>
</configuration>
</plugin>
</plugins>
</build>
</profile>
</profiles>
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</project>