fix to compile
This commit is contained in:
Grahame Grieve
parent
cbc1c2b5f0
commit
48d9c21748
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@ -0,0 +1,791 @@
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package org.hl7.fhir.r5.renderers;
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import java.io.IOException;
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import java.io.UnsupportedEncodingException;
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import java.util.ArrayList;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import org.apache.commons.codec.binary.Base64;
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import org.apache.commons.lang3.NotImplementedException;
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import org.hl7.fhir.exceptions.DefinitionException;
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import org.hl7.fhir.exceptions.FHIRException;
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import org.hl7.fhir.exceptions.FHIRFormatError;
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import org.hl7.fhir.r5.formats.FormatUtilities;
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import org.hl7.fhir.r5.model.Address;
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import org.hl7.fhir.r5.model.Annotation;
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import org.hl7.fhir.r5.model.Attachment;
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import org.hl7.fhir.r5.model.Base;
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import org.hl7.fhir.r5.model.Base64BinaryType;
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import org.hl7.fhir.r5.model.BooleanType;
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import org.hl7.fhir.r5.model.CanonicalResource;
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import org.hl7.fhir.r5.model.CodeType;
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import org.hl7.fhir.r5.model.CodeableConcept;
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import org.hl7.fhir.r5.model.Coding;
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import org.hl7.fhir.r5.model.ContactDetail;
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import org.hl7.fhir.r5.model.ContactPoint;
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import org.hl7.fhir.r5.model.DateTimeType;
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import org.hl7.fhir.r5.model.DomainResource;
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import org.hl7.fhir.r5.model.Dosage;
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import org.hl7.fhir.r5.model.ElementDefinition;
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import org.hl7.fhir.r5.model.Enumeration;
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import org.hl7.fhir.r5.model.Extension;
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import org.hl7.fhir.r5.model.HumanName;
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import org.hl7.fhir.r5.model.IdType;
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import org.hl7.fhir.r5.model.Identifier;
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import org.hl7.fhir.r5.model.InstantType;
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import org.hl7.fhir.r5.model.Meta;
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import org.hl7.fhir.r5.model.Narrative;
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import org.hl7.fhir.r5.model.Narrative.NarrativeStatus;
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import org.hl7.fhir.r5.model.Period;
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import org.hl7.fhir.r5.model.PrimitiveType;
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import org.hl7.fhir.r5.model.Property;
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import org.hl7.fhir.r5.model.Quantity;
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import org.hl7.fhir.r5.model.Range;
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import org.hl7.fhir.r5.model.Ratio;
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import org.hl7.fhir.r5.model.Reference;
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import org.hl7.fhir.r5.model.RelatedArtifact;
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import org.hl7.fhir.r5.model.Resource;
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import org.hl7.fhir.r5.model.SampledData;
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import org.hl7.fhir.r5.model.Signature;
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import org.hl7.fhir.r5.model.StringType;
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import org.hl7.fhir.r5.model.StructureDefinition;
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import org.hl7.fhir.r5.model.Timing;
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import org.hl7.fhir.r5.model.UriType;
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import org.hl7.fhir.r5.model.UsageContext;
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import org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper;
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import org.hl7.fhir.r5.renderers.utils.BaseWrappers.PropertyWrapper;
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import org.hl7.fhir.r5.renderers.utils.BaseWrappers.ResourceWrapper;
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import org.hl7.fhir.r5.renderers.utils.DirectWrappers.BaseWrapperDirect;
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import org.hl7.fhir.r5.renderers.utils.DirectWrappers.PropertyWrapperDirect;
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import org.hl7.fhir.r5.renderers.utils.DirectWrappers.ResourceWrapperDirect;
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import org.hl7.fhir.r5.renderers.utils.RenderingContext;
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import org.hl7.fhir.r5.renderers.utils.DOMWrappers.ResourceWrapperElement;
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import org.hl7.fhir.r5.renderers.utils.DOMWrappers.BaseWrapperElement;
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import org.hl7.fhir.r5.renderers.utils.Resolver.ResourceContext;
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import org.hl7.fhir.r5.renderers.utils.Resolver.ResourceWithReference;
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import org.hl7.fhir.r5.utils.ToolingExtensions;
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import org.hl7.fhir.r5.utils.XVerExtensionManager;
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import org.hl7.fhir.r5.utils.XVerExtensionManager.XVerExtensionStatus;
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import org.hl7.fhir.utilities.Utilities;
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import org.hl7.fhir.utilities.xhtml.NodeType;
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import org.hl7.fhir.utilities.xhtml.XhtmlComposer;
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import org.hl7.fhir.utilities.xhtml.XhtmlNode;
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import org.hl7.fhir.utilities.xml.XMLUtil;
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import org.w3c.dom.Element;
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public class ProfileDrivenRenderer extends ResourceRenderer {
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public ProfileDrivenRenderer(RenderingContext context, ResourceContext rcontext) {
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super(context, rcontext);
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}
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public ProfileDrivenRenderer(RenderingContext context) {
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super(context);
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}
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@Override
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public boolean render(XhtmlNode x, DomainResource r) throws FHIRFormatError, DefinitionException, IOException {
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// TODO Auto-generated method stub
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return false;
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}
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@Override
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public String display(DomainResource r) throws UnsupportedEncodingException, IOException {
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return "todo";
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}
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public void inject(Element er, XhtmlNode x, NarrativeStatus status, boolean pretty) {
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if (!x.hasAttribute("xmlns"))
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x.setAttribute("xmlns", "http://www.w3.org/1999/xhtml");
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Element le = XMLUtil.getNamedChild(er, "language");
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String l = le == null ? null : le.getAttribute("value");
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if (!Utilities.noString(l)) {
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// use both - see https://www.w3.org/TR/i18n-html-tech-lang/#langvalues
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x.setAttribute("lang", l);
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x.setAttribute("xml:lang", l);
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}
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Element txt = XMLUtil.getNamedChild(er, "text");
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if (txt == null) {
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txt = er.getOwnerDocument().createElementNS(FormatUtilities.FHIR_NS, "text");
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Element n = XMLUtil.getFirstChild(er);
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while (n != null && (n.getNodeName().equals("id") || n.getNodeName().equals("meta") || n.getNodeName().equals("implicitRules") || n.getNodeName().equals("language")))
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n = XMLUtil.getNextSibling(n);
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if (n == null)
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er.appendChild(txt);
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else
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er.insertBefore(txt, n);
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}
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Element st = XMLUtil.getNamedChild(txt, "status");
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if (st == null) {
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st = er.getOwnerDocument().createElementNS(FormatUtilities.FHIR_NS, "status");
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Element n = XMLUtil.getFirstChild(txt);
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if (n == null)
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txt.appendChild(st);
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else
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txt.insertBefore(st, n);
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}
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st.setAttribute("value", status.toCode());
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Element div = XMLUtil.getNamedChild(txt, "div");
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if (div == null) {
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div = er.getOwnerDocument().createElementNS(FormatUtilities.XHTML_NS, "div");
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div.setAttribute("xmlns", FormatUtilities.XHTML_NS);
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txt.appendChild(div);
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}
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if (div.hasChildNodes())
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div.appendChild(er.getOwnerDocument().createElementNS(FormatUtilities.XHTML_NS, "hr"));
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new XhtmlComposer(XhtmlComposer.XML, pretty).compose(div, x);
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}
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public void inject(org.hl7.fhir.r5.elementmodel.Element er, XhtmlNode x, NarrativeStatus status, boolean pretty) throws IOException, FHIRException {
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if (!x.hasAttribute("xmlns"))
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x.setAttribute("xmlns", "http://www.w3.org/1999/xhtml");
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String l = er.getChildValue("language");
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if (!Utilities.noString(l)) {
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// use both - see https://www.w3.org/TR/i18n-html-tech-lang/#langvalues
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x.setAttribute("lang", l);
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x.setAttribute("xml:lang", l);
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}
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org.hl7.fhir.r5.elementmodel.Element txt = er.getNamedChild("text");
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if (txt == null) {
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txt = new org.hl7.fhir.r5.elementmodel.Element("text", er.getProperty().getChild(null, "text"));
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int i = 0;
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while (i < er.getChildren().size() && (er.getChildren().get(i).getName().equals("id") || er.getChildren().get(i).getName().equals("meta") || er.getChildren().get(i).getName().equals("implicitRules") || er.getChildren().get(i).getName().equals("language")))
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i++;
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if (i >= er.getChildren().size())
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er.getChildren().add(txt);
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else
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er.getChildren().add(i, txt);
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}
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org.hl7.fhir.r5.elementmodel.Element st = txt.getNamedChild("status");
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if (st == null) {
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st = new org.hl7.fhir.r5.elementmodel.Element("status", txt.getProperty().getChild(null, "status"));
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txt.getChildren().add(0, st);
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}
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st.setValue(status.toCode());
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org.hl7.fhir.r5.elementmodel.Element div = txt.getNamedChild("div");
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if (div == null) {
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div = new org.hl7.fhir.r5.elementmodel.Element("div", txt.getProperty().getChild(null, "div"));
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txt.getChildren().add(div);
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div.setValue(new XhtmlComposer(XhtmlComposer.XML, pretty).compose(x));
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}
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div.setValue(x.toString());
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div.setXhtml(x);
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}
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public void generateResourceSummary(XhtmlNode x, ResourceWrapper res, boolean textAlready, boolean showCodeDetails) throws FHIRException, UnsupportedEncodingException, IOException {
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if (!textAlready) {
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XhtmlNode div = res.getNarrative();
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if (div != null) {
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if (div.allChildrenAreText())
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x.getChildNodes().addAll(div.getChildNodes());
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if (div.getChildNodes().size() == 1 && div.getChildNodes().get(0).allChildrenAreText())
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x.getChildNodes().addAll(div.getChildNodes().get(0).getChildNodes());
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}
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x.tx("Generated Summary: ");
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}
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String path = res.getName();
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StructureDefinition profile = getContext().getWorker().fetchResource(StructureDefinition.class, path);
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if (profile == null)
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x.tx("unknown resource " +path);
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else {
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boolean firstElement = true;
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boolean last = false;
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for (PropertyWrapper p : res.children()) {
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ElementDefinition child = getElementDefinition(profile.getSnapshot().getElement(), path+"."+p.getName(), p);
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if (p.getValues().size() > 0 && p.getValues().get(0) != null && child != null && isPrimitive(child) && includeInSummary(child)) {
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if (firstElement)
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firstElement = false;
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else if (last)
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x.tx("; ");
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boolean first = true;
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last = false;
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for (BaseWrapper v : p.getValues()) {
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if (first)
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first = false;
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else if (last)
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x.tx(", ");
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last = displayLeaf(res, v, child, x, p.getName(), showCodeDetails) || last;
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}
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}
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}
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}
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}
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private boolean includeInSummary(ElementDefinition child) {
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if (child.getIsModifier())
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return true;
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if (child.getMustSupport())
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return true;
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if (child.getType().size() == 1) {
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String t = child.getType().get(0).getWorkingCode();
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if (t.equals("Address") || t.equals("Contact") || t.equals("Reference") || t.equals("Uri") || t.equals("Url") || t.equals("Canonical"))
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return false;
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}
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return true;
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}
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private ElementDefinition getElementDefinition(List<ElementDefinition> elements, String path, PropertyWrapper p) {
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for (ElementDefinition element : elements)
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if (element.getPath().equals(path))
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return element;
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if (path.endsWith("\"]") && p.getStructure() != null)
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return p.getStructure().getSnapshot().getElement().get(0);
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return null;
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}
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private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints, String path, int indent) throws FHIRException, UnsupportedEncodingException, IOException {
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if (ew == null)
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return;
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Base e = ew.getBase();
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if (e instanceof StringType)
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x.addText(((StringType) e).getValue());
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else if (e instanceof CodeType)
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x.addText(((CodeType) e).getValue());
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else if (e instanceof IdType)
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x.addText(((IdType) e).getValue());
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else if (e instanceof Extension)
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return;
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else if (e instanceof InstantType)
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x.addText(((InstantType) e).toHumanDisplay());
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else if (e instanceof DateTimeType) {
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renderDateTime(x, e);
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} else if (e instanceof Base64BinaryType)
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x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
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else if (e instanceof org.hl7.fhir.r5.model.DateType)
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x.addText(((org.hl7.fhir.r5.model.DateType) e).toHumanDisplay());
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else if (e instanceof Enumeration) {
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Object ev = ((Enumeration<?>) e).getValue();
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x.addText(ev == null ? "" : ev.toString()); // todo: look up a display name if there is one
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} else if (e instanceof BooleanType)
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x.addText(((BooleanType) e).getValue().toString());
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else if (e instanceof CodeableConcept) {
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renderCodeableConcept(x, (CodeableConcept) e, showCodeDetails);
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} else if (e instanceof Coding) {
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renderCoding(x, (Coding) e, showCodeDetails);
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} else if (e instanceof Annotation) {
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renderAnnotation(x, (Annotation) e);
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} else if (e instanceof Identifier) {
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renderIdentifier(x, (Identifier) e);
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} else if (e instanceof org.hl7.fhir.r5.model.IntegerType) {
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x.addText(Integer.toString(((org.hl7.fhir.r5.model.IntegerType) e).getValue()));
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} else if (e instanceof org.hl7.fhir.r5.model.DecimalType) {
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x.addText(((org.hl7.fhir.r5.model.DecimalType) e).getValue().toString());
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} else if (e instanceof HumanName) {
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renderHumanName(x, (HumanName) e);
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} else if (e instanceof SampledData) {
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renderSampledData(x, (SampledData) e);
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} else if (e instanceof Address) {
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renderAddress(x, (Address) e);
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} else if (e instanceof ContactPoint) {
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renderContactPoint(x, (ContactPoint) e);
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} else if (e instanceof ContactDetail) {
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ContactDetail cd = (ContactDetail) e;
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if (cd.hasName()) {
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x.tx(cd.getName()+": ");
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}
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boolean first = true;
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for (ContactPoint c : cd.getTelecom()) {
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if (first) first = false; else x.tx(",");
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renderContactPoint(x, c);
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}
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} else if (e instanceof UriType) {
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renderUri(x, (UriType) e, defn.getPath(), rcontext != null && rcontext.getResourceResource() != null ? rcontext.getResourceResource().getId() : null);
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} else if (e instanceof Timing) {
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renderTiming(x, (Timing) e);
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} else if (e instanceof Range) {
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renderRange(x, (Range) e);
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} else if (e instanceof Quantity) {
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renderQuantity(x, (Quantity) e, showCodeDetails);
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} else if (e instanceof Ratio) {
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renderQuantity(x, ((Ratio) e).getNumerator(), showCodeDetails);
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x.tx("/");
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renderQuantity(x, ((Ratio) e).getDenominator(), showCodeDetails);
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} else if (e instanceof Period) {
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Period p = (Period) e;
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renderPeriod(x, p);
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} else if (e instanceof Reference) {
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Reference r = (Reference) e;
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renderReference(res, x, r);
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} else if (e instanceof Resource) {
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return;
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} else if (e instanceof ElementDefinition) {
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x.tx("todo-bundle");
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} else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta)) {
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StructureDefinition sd = getContext().getWorker().fetchTypeDefinition(e.fhirType());
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if (sd == null)
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throw new NotImplementedException("type "+e.getClass().getName()+" not handled yet, and no structure found");
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else
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generateByProfile(res, sd, ew, sd.getSnapshot().getElement(), sd.getSnapshot().getElementFirstRep(),
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getChildrenForPath(sd.getSnapshot().getElement(), sd.getSnapshot().getElementFirstRep().getPath()), x, path, showCodeDetails, indent + 1);
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}
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}
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private boolean displayLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, String name, boolean showCodeDetails) throws FHIRException, UnsupportedEncodingException, IOException {
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if (ew == null)
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return false;
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Base e = ew.getBase();
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if (e == null)
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return false;
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Map<String, String> displayHints = readDisplayHints(defn);
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if (name.endsWith("[x]"))
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name = name.substring(0, name.length() - 3);
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if (!showCodeDetails && e instanceof PrimitiveType && isDefault(displayHints, ((PrimitiveType) e)))
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return false;
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if (e instanceof StringType) {
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x.addText(name+": "+((StringType) e).getValue());
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return true;
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} else if (e instanceof CodeType) {
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x.addText(name+": "+((CodeType) e).getValue());
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return true;
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} else if (e instanceof IdType) {
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x.addText(name+": "+((IdType) e).getValue());
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return true;
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} else if (e instanceof UriType) {
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x.addText(name+": "+((UriType) e).getValue());
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return true;
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} else if (e instanceof DateTimeType) {
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x.addText(name+": "+((DateTimeType) e).toHumanDisplay());
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return true;
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} else if (e instanceof InstantType) {
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x.addText(name+": "+((InstantType) e).toHumanDisplay());
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return true;
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} else if (e instanceof Extension) {
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// x.tx("Extensions: todo");
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return false;
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} else if (e instanceof org.hl7.fhir.r5.model.DateType) {
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x.addText(name+": "+((org.hl7.fhir.r5.model.DateType) e).toHumanDisplay());
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return true;
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} else if (e instanceof Enumeration) {
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x.addText(((Enumeration<?>) e).getValue().toString()); // todo: look up a display name if there is one
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return true;
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} else if (e instanceof BooleanType) {
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if (((BooleanType) e).getValue()) {
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x.addText(name);
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return true;
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}
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} else if (e instanceof CodeableConcept) {
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renderCodeableConcept(x, (CodeableConcept) e, showCodeDetails);
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return true;
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} else if (e instanceof Coding) {
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renderCoding(x, (Coding) e, showCodeDetails);
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return true;
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} else if (e instanceof Annotation) {
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renderAnnotation(x, (Annotation) e, showCodeDetails);
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return true;
|
||||
} else if (e instanceof org.hl7.fhir.r5.model.IntegerType) {
|
||||
x.addText(Integer.toString(((org.hl7.fhir.r5.model.IntegerType) e).getValue()));
|
||||
return true;
|
||||
} else if (e instanceof org.hl7.fhir.r5.model.DecimalType) {
|
||||
x.addText(((org.hl7.fhir.r5.model.DecimalType) e).getValue().toString());
|
||||
return true;
|
||||
} else if (e instanceof Identifier) {
|
||||
renderIdentifier(x, (Identifier) e);
|
||||
return true;
|
||||
} else if (e instanceof HumanName) {
|
||||
renderHumanName(x, (HumanName) e);
|
||||
return true;
|
||||
} else if (e instanceof SampledData) {
|
||||
renderSampledData(x, (SampledData) e);
|
||||
return true;
|
||||
} else if (e instanceof Address) {
|
||||
renderAddress(x, (Address) e);
|
||||
return true;
|
||||
} else if (e instanceof ContactPoint) {
|
||||
renderContactPoint(x, (ContactPoint) e);
|
||||
return true;
|
||||
} else if (e instanceof Timing) {
|
||||
renderTiming(x, (Timing) e);
|
||||
return true;
|
||||
} else if (e instanceof Quantity) {
|
||||
renderQuantity(x, (Quantity) e, showCodeDetails);
|
||||
return true;
|
||||
} else if (e instanceof Ratio) {
|
||||
renderQuantity(x, ((Ratio) e).getNumerator(), showCodeDetails);
|
||||
x.tx("/");
|
||||
renderQuantity(x, ((Ratio) e).getDenominator(), showCodeDetails);
|
||||
return true;
|
||||
} else if (e instanceof Period) {
|
||||
Period p = (Period) e;
|
||||
x.addText(name+": ");
|
||||
x.addText(!p.hasStart() ? "?ngen-2?" : p.getStartElement().toHumanDisplay());
|
||||
x.tx(" --> ");
|
||||
x.addText(!p.hasEnd() ? "(ongoing)" : p.getEndElement().toHumanDisplay());
|
||||
return true;
|
||||
} else if (e instanceof Reference) {
|
||||
Reference r = (Reference) e;
|
||||
if (r.hasDisplayElement())
|
||||
x.addText(r.getDisplay());
|
||||
else if (r.hasReferenceElement()) {
|
||||
ResourceWithReference tr = resolveReference(res, r.getReference());
|
||||
x.addText(tr == null ? r.getReference() : "?ngen-3"); // getDisplayForReference(tr.getReference()));
|
||||
} else
|
||||
x.tx("?ngen-4?");
|
||||
return true;
|
||||
} else if (e instanceof Narrative) {
|
||||
return false;
|
||||
} else if (e instanceof Resource) {
|
||||
return false;
|
||||
} else if (e instanceof ContactDetail) {
|
||||
ContactDetail cd = (ContactDetail) e;
|
||||
if (cd.hasName()) {
|
||||
x.tx(cd.getName()+": ");
|
||||
}
|
||||
boolean first = true;
|
||||
for (ContactPoint c : cd.getTelecom()) {
|
||||
if (first) first = false; else x.tx(",");
|
||||
renderContactPoint(x, c);
|
||||
}
|
||||
return true;
|
||||
} else if (e instanceof Range) {
|
||||
return false;
|
||||
} else if (e instanceof Meta) {
|
||||
return false;
|
||||
} else if (e instanceof Dosage) {
|
||||
return false;
|
||||
} else if (e instanceof Signature) {
|
||||
return false;
|
||||
} else if (e instanceof UsageContext) {
|
||||
return false;
|
||||
} else if (e instanceof RelatedArtifact) {
|
||||
return false;
|
||||
} else if (e instanceof ElementDefinition) {
|
||||
return false;
|
||||
} else if (e instanceof Base64BinaryType) {
|
||||
return false;
|
||||
} else if (!(e instanceof Attachment))
|
||||
throw new NotImplementedException("type "+e.getClass().getName()+" not handled yet");
|
||||
return false;
|
||||
}
|
||||
|
||||
|
||||
|
||||
private boolean isPrimitive(ElementDefinition e) {
|
||||
//we can tell if e is a primitive because it has types
|
||||
if (e.getType().isEmpty())
|
||||
return false;
|
||||
if (e.getType().size() == 1 && isBase(e.getType().get(0).getWorkingCode()))
|
||||
return false;
|
||||
return true;
|
||||
// return !e.getType().isEmpty()
|
||||
}
|
||||
|
||||
private boolean isBase(String code) {
|
||||
return code.equals("Element") || code.equals("BackboneElement");
|
||||
}
|
||||
|
||||
private List<ElementDefinition> getChildrenForPath(List<ElementDefinition> elements, String path) throws DefinitionException {
|
||||
// do we need to do a name reference substitution?
|
||||
for (ElementDefinition e : elements) {
|
||||
if (e.getPath().equals(path) && e.hasContentReference()) {
|
||||
String ref = e.getContentReference();
|
||||
ElementDefinition t = null;
|
||||
// now, resolve the name
|
||||
for (ElementDefinition e1 : elements) {
|
||||
if (ref.equals("#"+e1.getId()))
|
||||
t = e1;
|
||||
}
|
||||
if (t == null)
|
||||
throw new DefinitionException("Unable to resolve content reference "+ref+" trying to resolve "+path);
|
||||
path = t.getPath();
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
List<ElementDefinition> results = new ArrayList<ElementDefinition>();
|
||||
for (ElementDefinition e : elements) {
|
||||
if (e.getPath().startsWith(path+".") && !e.getPath().substring(path.length()+1).contains("."))
|
||||
results.add(e);
|
||||
}
|
||||
return results;
|
||||
}
|
||||
|
||||
|
||||
private boolean generateByProfile(StructureDefinition profile, boolean showCodeDetails) {
|
||||
XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
|
||||
x.para().b().tx("Generated Narrative"+(showCodeDetails ? " with Details" : ""));
|
||||
try {
|
||||
generateByProfile(rcontext.getResourceResource(), profile, rcontext.getResourceResource(), profile.getSnapshot().getElement(), profile.getSnapshot().getElement().get(0), getChildrenForPath(profile.getSnapshot().getElement(), rcontext.getResourceResource().getResourceType().toString()), x, rcontext.getResourceResource().getResourceType().toString(), showCodeDetails);
|
||||
} catch (Exception e) {
|
||||
e.printStackTrace();
|
||||
x.para().b().style("color: maroon").tx("Exception generating Narrative: "+e.getMessage());
|
||||
}
|
||||
inject(rcontext.getResourceResource(), x, NarrativeStatus.GENERATED);
|
||||
return true;
|
||||
}
|
||||
|
||||
private String generateByProfile(Element er, StructureDefinition profile, boolean showCodeDetails) throws IOException, org.hl7.fhir.exceptions.FHIRException {
|
||||
XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
|
||||
x.para().b().tx("Generated Narrative"+(showCodeDetails ? " with Details" : ""));
|
||||
try {
|
||||
generateByProfile(er, profile, er, profile.getSnapshot().getElement(), profile.getSnapshot().getElement().get(0), getChildrenForPath(profile.getSnapshot().getElement(), er.getLocalName()), x, er.getLocalName(), showCodeDetails);
|
||||
} catch (Exception e) {
|
||||
e.printStackTrace();
|
||||
x.para().b().style("color: maroon").tx("Exception generating Narrative: "+e.getMessage());
|
||||
}
|
||||
inject(er, x, NarrativeStatus.GENERATED, false);
|
||||
String b = new XhtmlComposer(XhtmlComposer.XML, false).compose(x);
|
||||
return b;
|
||||
}
|
||||
|
||||
private void generateByProfile(Element eres, StructureDefinition profile, Element ee, List<ElementDefinition> allElements, ElementDefinition defn, List<ElementDefinition> children, XhtmlNode x, String path, boolean showCodeDetails) throws FHIRException, UnsupportedEncodingException, IOException {
|
||||
|
||||
ResourceWrapperElement resw = new ResourceWrapperElement(this, eres, profile);
|
||||
BaseWrapperElement base = new BaseWrapperElement(this, ee, null, profile, profile.getSnapshot().getElement().get(0));
|
||||
generateByProfile(resw, profile, base, allElements, defn, children, x, path, showCodeDetails, 0);
|
||||
}
|
||||
|
||||
|
||||
private void generateByProfile(Resource res, StructureDefinition profile, Base e, List<ElementDefinition> allElements, ElementDefinition defn, List<ElementDefinition> children, XhtmlNode x, String path, boolean showCodeDetails) throws FHIRException, UnsupportedEncodingException, IOException {
|
||||
generateByProfile(new ResourceWrapperDirect(this, res), profile, new BaseWrapperDirect(this, e), allElements, defn, children, x, path, showCodeDetails, 0);
|
||||
}
|
||||
|
||||
private void generateByProfile(ResourceWrapper res, StructureDefinition profile, BaseWrapper e, List<ElementDefinition> allElements, ElementDefinition defn, List<ElementDefinition> children, XhtmlNode x, String path, boolean showCodeDetails, int indent) throws FHIRException, UnsupportedEncodingException, IOException {
|
||||
if (children.isEmpty()) {
|
||||
renderLeaf(res, e, defn, x, false, showCodeDetails, readDisplayHints(defn), path, indent);
|
||||
} else {
|
||||
for (PropertyWrapper p : splitExtensions(profile, e.children())) {
|
||||
if (p.hasValues()) {
|
||||
ElementDefinition child = getElementDefinition(children, path+"."+p.getName(), p);
|
||||
if (child != null) {
|
||||
Map<String, String> displayHints = readDisplayHints(child);
|
||||
if (!exemptFromRendering(child)) {
|
||||
List<ElementDefinition> grandChildren = getChildrenForPath(allElements, path+"."+p.getName());
|
||||
filterGrandChildren(grandChildren, path+"."+p.getName(), p);
|
||||
if (p.getValues().size() > 0 && child != null) {
|
||||
if (isPrimitive(child)) {
|
||||
XhtmlNode para = x.para();
|
||||
String name = p.getName();
|
||||
if (name.endsWith("[x]"))
|
||||
name = name.substring(0, name.length() - 3);
|
||||
if (showCodeDetails || !isDefaultValue(displayHints, p.getValues())) {
|
||||
para.b().addText(name);
|
||||
para.tx(": ");
|
||||
if (renderAsList(child) && p.getValues().size() > 1) {
|
||||
XhtmlNode list = x.ul();
|
||||
for (BaseWrapper v : p.getValues())
|
||||
renderLeaf(res, v, child, list.li(), false, showCodeDetails, displayHints, path, indent);
|
||||
} else {
|
||||
boolean first = true;
|
||||
for (BaseWrapper v : p.getValues()) {
|
||||
if (first)
|
||||
first = false;
|
||||
else
|
||||
para.tx(", ");
|
||||
renderLeaf(res, v, child, para, false, showCodeDetails, displayHints, path, indent);
|
||||
}
|
||||
}
|
||||
}
|
||||
} else if (canDoTable(path, p, grandChildren)) {
|
||||
x.addTag(getHeader()).addText(Utilities.capitalize(Utilities.camelCase(Utilities.pluralizeMe(p.getName()))));
|
||||
XhtmlNode tbl = x.table( "grid");
|
||||
XhtmlNode tr = tbl.tr();
|
||||
tr.td().tx("-"); // work around problem with empty table rows
|
||||
addColumnHeadings(tr, grandChildren);
|
||||
for (BaseWrapper v : p.getValues()) {
|
||||
if (v != null) {
|
||||
tr = tbl.tr();
|
||||
tr.td().tx("*"); // work around problem with empty table rows
|
||||
addColumnValues(res, tr, grandChildren, v, showCodeDetails, displayHints, path, indent);
|
||||
}
|
||||
}
|
||||
} else {
|
||||
for (BaseWrapper v : p.getValues()) {
|
||||
if (v != null) {
|
||||
XhtmlNode bq = x.addTag("blockquote");
|
||||
bq.para().b().addText(p.getName());
|
||||
generateByProfile(res, profile, v, allElements, child, grandChildren, bq, path+"."+p.getName(), showCodeDetails, indent+1);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
private String getHeader() {
|
||||
int i = 3;
|
||||
while (i <= context.getHeaderLevelContext())
|
||||
i++;
|
||||
if (i > 6)
|
||||
i = 6;
|
||||
return "h"+Integer.toString(i);
|
||||
}
|
||||
|
||||
private List<PropertyWrapper> getValues(String path, PropertyWrapper p, ElementDefinition e) {
|
||||
List<PropertyWrapper> res = new ArrayList<PropertyWrapper>();
|
||||
for (BaseWrapper v : p.getValues()) {
|
||||
for (PropertyWrapper g : v.children()) {
|
||||
if ((path+"."+p.getName()+"."+g.getName()).equals(e.getPath()))
|
||||
res.add(p);
|
||||
}
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
private boolean canDoTable(String path, PropertyWrapper p, List<ElementDefinition> grandChildren) {
|
||||
for (ElementDefinition e : grandChildren) {
|
||||
List<PropertyWrapper> values = getValues(path, p, e);
|
||||
if (values.size() > 1 || !isPrimitive(e) || !canCollapse(e))
|
||||
return false;
|
||||
}
|
||||
return true;
|
||||
}
|
||||
|
||||
|
||||
private boolean canCollapse(ElementDefinition e) {
|
||||
// we can collapse any data type
|
||||
return !e.getType().isEmpty();
|
||||
}
|
||||
private boolean exemptFromRendering(ElementDefinition child) {
|
||||
if (child == null)
|
||||
return false;
|
||||
if ("Composition.subject".equals(child.getPath()))
|
||||
return true;
|
||||
if ("Composition.section".equals(child.getPath()))
|
||||
return true;
|
||||
return false;
|
||||
}
|
||||
|
||||
private boolean renderAsList(ElementDefinition child) {
|
||||
if (child.getType().size() == 1) {
|
||||
String t = child.getType().get(0).getWorkingCode();
|
||||
if (t.equals("Address") || t.equals("Reference"))
|
||||
return true;
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
private void addColumnHeadings(XhtmlNode tr, List<ElementDefinition> grandChildren) {
|
||||
for (ElementDefinition e : grandChildren)
|
||||
tr.td().b().addText(Utilities.capitalize(tail(e.getPath())));
|
||||
}
|
||||
|
||||
private void addColumnValues(ResourceWrapper res, XhtmlNode tr, List<ElementDefinition> grandChildren, BaseWrapper v, boolean showCodeDetails, Map<String, String> displayHints, String path, int indent) throws FHIRException, UnsupportedEncodingException, IOException {
|
||||
for (ElementDefinition e : grandChildren) {
|
||||
PropertyWrapper p = v.getChildByName(e.getPath().substring(e.getPath().lastIndexOf(".")+1));
|
||||
if (p == null || p.getValues().size() == 0 || p.getValues().get(0) == null)
|
||||
tr.td().tx(" ");
|
||||
else
|
||||
renderLeaf(res, p.getValues().get(0), e, tr.td(), false, showCodeDetails, displayHints, path, indent);
|
||||
}
|
||||
}
|
||||
|
||||
private void filterGrandChildren(List<ElementDefinition> grandChildren, String string, PropertyWrapper prop) {
|
||||
List<ElementDefinition> toRemove = new ArrayList<ElementDefinition>();
|
||||
toRemove.addAll(grandChildren);
|
||||
for (BaseWrapper b : prop.getValues()) {
|
||||
List<ElementDefinition> list = new ArrayList<ElementDefinition>();
|
||||
for (ElementDefinition ed : toRemove) {
|
||||
PropertyWrapper p = b.getChildByName(tail(ed.getPath()));
|
||||
if (p != null && p.hasValues())
|
||||
list.add(ed);
|
||||
}
|
||||
toRemove.removeAll(list);
|
||||
}
|
||||
grandChildren.removeAll(toRemove);
|
||||
}
|
||||
|
||||
private List<PropertyWrapper> splitExtensions(StructureDefinition profile, List<PropertyWrapper> children) throws UnsupportedEncodingException, IOException, FHIRException {
|
||||
List<PropertyWrapper> results = new ArrayList<PropertyWrapper>();
|
||||
Map<String, PropertyWrapper> map = new HashMap<String, PropertyWrapper>();
|
||||
for (PropertyWrapper p : children)
|
||||
if (p.getName().equals("extension") || p.getName().equals("modifierExtension")) {
|
||||
// we're going to split these up, and create a property for each url
|
||||
if (p.hasValues()) {
|
||||
for (BaseWrapper v : p.getValues()) {
|
||||
Extension ex = (Extension) v.getBase();
|
||||
String url = ex.getUrl();
|
||||
StructureDefinition ed = getContext().getWorker().fetchResource(StructureDefinition.class, url);
|
||||
if (ed == null) {
|
||||
if (xverManager == null) {
|
||||
xverManager = new XVerExtensionManager(context.getWorker());
|
||||
}
|
||||
if (xverManager.matchingUrl(url) && xverManager.status(url) == XVerExtensionStatus.Valid) {
|
||||
ed = xverManager.makeDefinition(url);
|
||||
getContext().getWorker().generateSnapshot(ed);
|
||||
getContext().getWorker().cacheResource(ed);
|
||||
}
|
||||
}
|
||||
if (p.getName().equals("modifierExtension") && ed == null)
|
||||
throw new DefinitionException("Unknown modifier extension "+url);
|
||||
PropertyWrapper pe = map.get(p.getName()+"["+url+"]");
|
||||
if (pe == null) {
|
||||
if (ed == null) {
|
||||
if (url.startsWith("http://hl7.org/fhir") && !url.startsWith("http://hl7.org/fhir/us"))
|
||||
throw new DefinitionException("unknown extension "+url);
|
||||
// System.out.println("unknown extension "+url);
|
||||
pe = new PropertyWrapperDirect(this, new Property(p.getName()+"["+url+"]", p.getTypeCode(), p.getDefinition(), p.getMinCardinality(), p.getMaxCardinality(), ex));
|
||||
} else {
|
||||
ElementDefinition def = ed.getSnapshot().getElement().get(0);
|
||||
pe = new PropertyWrapperDirect(this, new Property(p.getName()+"["+url+"]", "Extension", def.getDefinition(), def.getMin(), def.getMax().equals("*") ? Integer.MAX_VALUE : Integer.parseInt(def.getMax()), ex));
|
||||
((PropertyWrapperDirect) pe).getWrapped().setStructure(ed);
|
||||
}
|
||||
results.add(pe);
|
||||
} else
|
||||
pe.getValues().add(v);
|
||||
}
|
||||
}
|
||||
} else
|
||||
results.add(p);
|
||||
return results;
|
||||
}
|
||||
|
||||
|
||||
private Map<String, String> readDisplayHints(ElementDefinition defn) throws DefinitionException {
|
||||
Map<String, String> hints = new HashMap<String, String>();
|
||||
if (defn != null) {
|
||||
String displayHint = ToolingExtensions.getDisplayHint(defn);
|
||||
if (!Utilities.noString(displayHint)) {
|
||||
String[] list = displayHint.split(";");
|
||||
for (String item : list) {
|
||||
String[] parts = item.split(":");
|
||||
if (parts.length != 2)
|
||||
throw new DefinitionException("error reading display hint: '"+displayHint+"'");
|
||||
hints.put(parts[0].trim(), parts[1].trim());
|
||||
}
|
||||
}
|
||||
}
|
||||
return hints;
|
||||
}
|
||||
|
||||
@SuppressWarnings("rawtypes")
|
||||
private boolean isDefaultValue(Map<String, String> displayHints, List<BaseWrapper> list) throws UnsupportedEncodingException, IOException, FHIRException {
|
||||
if (list.size() != 1)
|
||||
return false;
|
||||
if (list.get(0).getBase() instanceof PrimitiveType)
|
||||
return isDefault(displayHints, (PrimitiveType) list.get(0).getBase());
|
||||
else
|
||||
return false;
|
||||
}
|
||||
|
||||
private boolean isDefault(Map<String, String> displayHints, PrimitiveType primitiveType) {
|
||||
String v = primitiveType.asStringValue();
|
||||
if (!Utilities.noString(v) && displayHints.containsKey("default") && v.equals(displayHints.get("default")))
|
||||
return true;
|
||||
return false;
|
||||
}
|
||||
|
||||
|
||||
protected String tail(String path) {
|
||||
return path.substring(path.lastIndexOf(".")+1);
|
||||
}
|
||||
|
||||
|
||||
}
|
||||
|
|
@ -0,0 +1,34 @@
|
|||
package org.hl7.fhir.r5.renderers;
|
||||
|
||||
import org.hl7.fhir.r5.model.Resource;
|
||||
import org.hl7.fhir.r5.renderers.utils.RenderingContext;
|
||||
import org.hl7.fhir.r5.renderers.utils.Resolver.ResourceContext;
|
||||
|
||||
public class RendererFactory {
|
||||
|
||||
public static ResourceRenderer factory(String resourceName, RenderingContext context) {
|
||||
if ("CodeSystem".equals(resourceName)) {
|
||||
return new CodeSystemRenderer(context);
|
||||
}
|
||||
if ("ValueSet".equals(resourceName)) {
|
||||
return new ValueSetRenderer(context);
|
||||
}
|
||||
if ("ConceptMap".equals(resourceName)) {
|
||||
return new ConceptMapRenderer(context);
|
||||
}
|
||||
if ("Patient".equals(resourceName)) {
|
||||
return new PatientRenderer(context);
|
||||
}
|
||||
if ("Encounter".equals(resourceName)) {
|
||||
return new EncounterRenderer(context);
|
||||
}
|
||||
if ("Provenance".equals(resourceName)) {
|
||||
return new ProvenanceRenderer(context);
|
||||
}
|
||||
return new ProfileDrivenRenderer(context);
|
||||
}
|
||||
|
||||
public static ResourceRenderer factory(Resource resource, RenderingContext context) {
|
||||
return factory(resource.fhirType(), context);
|
||||
}
|
||||
}
|
||||
|
|
@ -11,10 +11,6 @@ echo ..
|
|||
|
||||
call mvn versions:set -DnewVersion=%newver%-SNAPSHOT
|
||||
|
||||
call git commit -t v%newver% -a -m "Release new version %newver%"
|
||||
call git tag v%newver%
|
||||
|
||||
call git push origin master
|
||||
call "C:\tools\fnr.exe" -dir "C:\work\org.hl7.fhir\build" -fileMask "*.xml" -find "%oldver%-SNAPSHOT" -replace "%newver%-SNAPSHOT" -count 8
|
||||
call "C:\tools\fnr.exe" -dir "C:\work\org.hl7.fhir\fhir-ig-publisher" -fileMask "*.xml" -find "%oldver%-SNAPSHOT" -replace "%newver%-SNAPSHOT" -count 2
|
||||
call "C:\tools\fnr.exe" -dir "C:\work\org.hl7.fhir\latest-ig-publisher" -fileMask "*.html" -find "%oldver%" -replace "%newver%" -count 1
|
||||
|
|
@ -26,6 +22,10 @@ IF %ERRORLEVEL% NEQ 0 (
|
|||
|
||||
call "C:\tools\versionNotes.exe" -fileName C:\work\org.hl7.fhir\org.hl7.fhir.core\release-notes-validator.md -version %newver% -fileDest C:\temp\current-release-notes-validator.md -url https://storage.googleapis.com/ig-build/org.hl7.fhir.validator.jar -maven https://oss.sonatype.org/service/local/artifact/maven/redirect?r=snapshots&g=ca.uhn.hapi.fhir&a=org.hl7.fhir.validation.cli&v=%newver%-SNAPSHOT&e=jar
|
||||
|
||||
call git commit -t v%newver% -a -m "Release new version %newver%"
|
||||
call git tag v%newver%
|
||||
call git push origin master
|
||||
|
||||
call gsutil cp -a public-read org.hl7.fhir.validation.cli\target\org.hl7.fhir.validation.cli-%newver%-SNAPSHOT.jar gs://ig-build/org.hl7.fhir.validator.jar
|
||||
|
||||
cd ..\latest-ig-publisher
|
||||
|
|
|
|||
Loading…
Reference in New Issue