honeymoose
/
org.hl7.fhir.core
mirror of https://github.com/hapifhir/org.hl7.fhir.core.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity

Look up support in Tx Tests

This commit is contained in:
Grahame Grieve 2024-04-11 08:29:34 +10:00
parent 6e4c620515
commit 4ceac5012b
10 changed files with 131 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

8
org.hl7.fhir.convertors/src/main/java/org/hl7/fhir/convertors/txClient/TerminologyClientR2.java
View File

@ -2,6 +2,7 @@ package org.hl7.fhir.convertors.txClient;
import java.net.URISyntaxException;
import java.util.EnumSet;
import java.util.HashMap;
import java.util.Map;
/*
@ -36,6 +37,7 @@ import java.util.Map;
import org.hl7.fhir.convertors.conv10_50.resources10_50.TerminologyCapabilities10_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_10_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.dstu2.model.Resource;
import org.hl7.fhir.dstu2.utils.client.FHIRToolingClient;
import org.hl7.fhir.exceptions.FHIRException;
@ -45,6 +47,7 @@ import org.hl7.fhir.r5.model.CapabilityStatement;
import org.hl7.fhir.r5.model.Parameters;
import org.hl7.fhir.r5.model.TerminologyCapabilities;
import org.hl7.fhir.r5.model.ValueSet;
import org.hl7.fhir.r5.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r5.terminologies.client.ITerminologyClient;
import org.hl7.fhir.r5.utils.client.network.ClientHeaders;
import org.hl7.fhir.utilities.FhirPublication;
@ -165,6 +168,11 @@ public class TerminologyClientR2 implements ITerminologyClient {
return (Parameters) VersionConvertorFactory_10_50.convertResource(client.lookupCode(params));
}
@Override
public Parameters lookupCode(Parameters params) throws FHIRException {
return (Parameters) VersionConvertorFactory_10_50.convertResource(client.lookupCode((org.hl7.fhir.dstu2.model.Parameters) VersionConvertorFactory_10_50.convertResource(params)));
}
@Override
public int getRetryCount() throws FHIRException {
return client.getRetryCount();

8
org.hl7.fhir.convertors/src/main/java/org/hl7/fhir/convertors/txClient/TerminologyClientR3.java
View File

@ -2,6 +2,7 @@ package org.hl7.fhir.convertors.txClient;
import java.net.URISyntaxException;
import java.util.EnumSet;
import java.util.HashMap;
import java.util.Map;
/*
@ -36,6 +37,7 @@ import java.util.Map;
import org.hl7.fhir.convertors.conv30_50.resources30_50.TerminologyCapabilities30_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.dstu3.model.Resource;
import org.hl7.fhir.dstu3.utils.client.FHIRToolingClient;
import org.hl7.fhir.exceptions.FHIRException;
@ -45,6 +47,7 @@ import org.hl7.fhir.r5.model.CapabilityStatement;
import org.hl7.fhir.r5.model.Parameters;
import org.hl7.fhir.r5.model.TerminologyCapabilities;
import org.hl7.fhir.r5.model.ValueSet;
import org.hl7.fhir.r5.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r5.terminologies.client.ITerminologyClient;
import org.hl7.fhir.r5.utils.client.network.ClientHeaders;
import org.hl7.fhir.utilities.FhirPublication;
@ -155,6 +158,11 @@ public class TerminologyClientR3 implements ITerminologyClient {
return (Parameters) VersionConvertorFactory_30_50.convertResource(client.lookupCode(params));
}
@Override
public Parameters lookupCode(Parameters params) throws FHIRException {
return (Parameters) VersionConvertorFactory_30_50.convertResource(client.lookupCode((org.hl7.fhir.dstu3.model.Parameters) VersionConvertorFactory_30_50.convertResource(params)));
}
@Override
public int getRetryCount() throws FHIRException {
return client.getRetryCount();

6
org.hl7.fhir.convertors/src/main/java/org/hl7/fhir/convertors/txClient/TerminologyClientR4.java
View File

@ -18,6 +18,7 @@ import org.hl7.fhir.r5.model.OperationOutcome;
import org.hl7.fhir.r5.model.Parameters;
import org.hl7.fhir.r5.model.TerminologyCapabilities;
import org.hl7.fhir.r5.model.ValueSet;
import org.hl7.fhir.r5.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r5.terminologies.client.ITerminologyClient;
import org.hl7.fhir.r5.utils.client.network.ClientHeaders;
import org.hl7.fhir.utilities.FhirPublication;
@ -181,6 +182,11 @@ public class TerminologyClientR4 implements ITerminologyClient {
return (Parameters) VersionConvertorFactory_40_50.convertResource(client.lookupCode(params));
}
@Override
public Parameters lookupCode(Parameters params) throws FHIRException {
return (Parameters) VersionConvertorFactory_40_50.convertResource(client.lookupCode((org.hl7.fhir.r4.model.Parameters) VersionConvertorFactory_40_50.convertResource(params)));
}
@Override
public int getRetryCount() throws FHIRException {
return client.getRetryCount();

20
org.hl7.fhir.dstu2/src/main/java/org/hl7/fhir/dstu2/utils/client/FHIRToolingClient.java
View File

@ -742,6 +742,26 @@ public class FHIRToolingClient extends FHIRBaseToolingClient {
return (Parameters) result.getPayload();
}
public Parameters lookupCode(Parameters p) {
recordUse();
ResourceRequest<Resource> result = utils.issuePostRequest(
resourceAddress.resolveOperationUri(ValueSet.class, "lookup"),
utils.getResourceAsByteArray(p, false, isJson(getPreferredResourceFormat())),
withVer(getPreferredResourceFormat(), "1.0"),
timeoutNormal);
result.addErrorStatus(410);// gone
result.addErrorStatus(404);// unknown
result.addErrorStatus(405);
result.addErrorStatus(422);// Unprocessable Entity
result.addSuccessStatus(200);
result.addSuccessStatus(201);
if (result.isUnsuccessfulRequest()) {
throw new EFhirClientException("Server returned error code " + result.getHttpStatus(),
(OperationOutcome) result.getPayload());
}
return (Parameters) result.getPayload();
}
public ValueSet expandValueset(ValueSet source, Parameters expParams) {
recordUse();
List<Header> headers = null;

18
org.hl7.fhir.dstu3/src/main/java/org/hl7/fhir/dstu3/utils/client/FHIRToolingClient.java
View File

@ -432,6 +432,24 @@ public class FHIRToolingClient extends FHIRBaseToolingClient {
return (Parameters) result.getPayload();
}
public Parameters lookupCode(Parameters p) {
recordUse();
org.hl7.fhir.dstu3.utils.client.network.ResourceRequest<Resource> result = null;
try {
result = client.issuePostRequest(resourceAddress.resolveOperationUri(CodeSystem.class, "lookup"),
ByteUtils.resourceToByteArray(p, false, isJson(getPreferredResourceFormat())),
withVer(getPreferredResourceFormat(), "3.0"),
generateHeaders(),
"CodeSystem/$lookup",
timeoutNormal);
} catch (IOException e) {
e.printStackTrace();
}
if (result.isUnsuccessfulRequest()) {
throw new EFhirClientException("Server returned error code " + result.getHttpStatus(), (OperationOutcome) result.getPayload());
}
return (Parameters) result.getPayload();
}
public ValueSet expandValueset(ValueSet source, Parameters expParams) {
recordUse();

17
org.hl7.fhir.r4/src/main/java/org/hl7/fhir/r4/utils/client/FHIRToolingClient.java
View File

@ -419,6 +419,23 @@ public class FHIRToolingClient extends FHIRBaseToolingClient {
return (Parameters) result.getPayload();
}
public Parameters lookupCode(Parameters p) {
recordUse();
org.hl7.fhir.r4.utils.client.network.ResourceRequest<Resource> result = null;
try {
result = client.issuePostRequest(resourceAddress.resolveOperationUri(CodeSystem.class, "lookup"),
ByteUtils.resourceToByteArray(p, false, isJson(getPreferredResourceFormat())),
withVer(getPreferredResourceFormat(), "4.0"), generateHeaders(), "CodeSystem/$lookup", timeoutNormal);
} catch (IOException e) {
throw new FHIRException(e);
}
if (result.isUnsuccessfulRequest()) {
throw new EFhirClientException("Server returned error code " + result.getHttpStatus(),
(OperationOutcome) result.getPayload());
}
return (Parameters) result.getPayload();
}
public ValueSet expandValueset(ValueSet source, Parameters expParams) {
recordUse();
Parameters p = expParams == null ? new Parameters() : expParams.copy();

1
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/terminologies/client/ITerminologyClient.java
View File

@ -62,6 +62,7 @@ public interface ITerminologyClient {
ITerminologyClient setRetryCount(int retryCount) throws FHIRException;
CapabilityStatement getCapabilitiesStatementQuick() throws FHIRException;
Parameters lookupCode(Map<String, String> params) throws FHIRException;
Parameters lookupCode(Parameters params) throws FHIRException;
Bundle validateBatch(Bundle batch);
CanonicalResource read(String type, String id);
ClientHeaders getClientHeaders();

7
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/terminologies/client/TerminologyClientR5.java
View File

@ -2,6 +2,7 @@ package org.hl7.fhir.r5.terminologies.client;
import java.net.URISyntaxException;
import java.util.EnumSet;
import java.util.HashMap;
import java.util.Map;
/*
@ -40,6 +41,7 @@ import org.hl7.fhir.r5.model.CanonicalResource;
import org.hl7.fhir.r5.model.CapabilityStatement;
import org.hl7.fhir.r5.model.CodeSystem;
import org.hl7.fhir.r5.model.Parameters;
import org.hl7.fhir.r5.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r5.model.Resource;
import org.hl7.fhir.r5.model.TerminologyCapabilities;
import org.hl7.fhir.r5.model.ValueSet;
@ -172,6 +174,11 @@ public class TerminologyClientR5 implements ITerminologyClient {
return client.lookupCode(params);
}
@Override
public Parameters lookupCode(Parameters params) {
return client.lookupCode(params);
}
@Override
public ITerminologyClient setRetryCount(int retryCount) throws FHIRException {
client.setRetryCount(retryCount);

19
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/utils/client/FHIRToolingClient.java
View File

@ -488,6 +488,25 @@ public class FHIRToolingClient extends FHIRBaseToolingClient {
return (Parameters) result.getPayload();
}
public Parameters lookupCode(Parameters p) {
recordUse();
org.hl7.fhir.r5.utils.client.network.ResourceRequest<Resource> result = null;
try {
result = client.issuePostRequest(resourceAddress.resolveOperationUri(CodeSystem.class, "lookup"),
ByteUtils.resourceToByteArray(p, false, isJson(getPreferredResourceFormat())),
withVer(getPreferredResourceFormat(), "4.0"),
generateHeaders(),
"CodeSystem/$lookup",
timeoutNormal);
} catch (IOException e) {
e.printStackTrace();
}
if (result.isUnsuccessfulRequest()) {
throw new EFhirClientException("Server returned error code " + result.getHttpStatus(), (OperationOutcome) result.getPayload());
}
return (Parameters) result.getPayload();
}
public String getAddress() {
return base;
}

26
org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/special/TxTester.java
View File

@ -201,6 +201,8 @@ public class TxTester {
msg = validate(test.str("name"),tx, setup, req, resp, fp, lang, profile, ext);
} else if (test.asString("operation").equals("cs-validate-code")) {
msg = validateCS(test.str("name"),tx, setup, req, resp, fp, lang, profile, ext);
} else if (test.asString("operation").equals("lookup")) {
msg = lookup(test.str("name"),tx, setup, req, resp, fp, lang, profile, ext);
} else {
throw new Exception("Unknown Operation "+test.asString("operation"));
}
@ -249,6 +251,30 @@ public class TxTester {
return new URI(server).getHost();
}
private String lookup(String id, ITerminologyClient tx, List<Resource> setup, Parameters p, String resp, String fp, String lang, Parameters profile, JsonObject ext) throws IOException {
for (Resource r : setup) {
p.addParameter().setName("tx-resource").setResource(r);
}
tx.setContentLanguage(lang);
p.getParameter().addAll(profile.getParameter());
String pj;
try {
Parameters po = tx.lookupCode(p);
TxTesterScrubbers.scrubParams(po);
TxTesterSorters.sortParameters(po);
pj = new org.hl7.fhir.r5.formats.JsonParser().setOutputStyle(OutputStyle.PRETTY).composeString(po);
} catch (EFhirClientException e) {
OperationOutcome oo = e.getServerError();
TxTesterScrubbers.scrubOO(oo, tight);
pj = new org.hl7.fhir.r5.formats.JsonParser().setOutputStyle(OutputStyle.PRETTY).composeString(oo);
}
String diff = CompareUtilities.checkJsonSrcIsSame(id, resp, pj, false, ext);
if (diff != null) {
Utilities.createDirectory(Utilities.getDirectoryForFile(fp));
TextFile.stringToFile(pj, fp);
}
return diff;
}
private String expand(String id, ITerminologyClient tx, List<Resource> setup, Parameters p, String resp, String fp, String lang, Parameters profile, JsonObject ext) throws IOException {
for (Resource r : setup) {
p.addParameter().setName("tx-resource").setResource(r);