Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core

RELEASE_NOTES.md

@@ -4,4 +4,5 @@
 
 ## Other code changes
 
-* no changes
+* More comprehensive internationalization phrase coverage reporting.
+* Shim interfaces and classes to support clinical reasoning project updates.

i18n-coverage.csv

@@ -1,5 +1,5 @@
 Locale,Coverage #,Coverage %
 de,869,43%
-es,740,37%
+es,740,36%
 ja,935,46%
 nl,873,43%

org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/context/BaseWorkerContext.java

@@ -277,7 +277,7 @@ public abstract class BaseWorkerContext extends I18nBase implements IWorkerConte
   protected boolean canRunWithoutTerminology;
   protected boolean noTerminologyServer;
   private int expandCodesLimit = 1000;
-  protected ILoggingService logger = new SystemOutLoggingService();
+  protected org.hl7.fhir.r5.context.ILoggingService logger = new SystemOutLoggingService();
   protected Parameters expParameters;
   private Map<String, PackageInformation> packages = new HashMap<>();
 
@@ -1991,7 +1991,7 @@ public abstract class BaseWorkerContext extends I18nBase implements IWorkerConte
     this.canRunWithoutTerminology = canRunWithoutTerminology;
   }
 
-  public void setLogger(@Nonnull ILoggingService logger) {
+  public void setLogger(@Nonnull org.hl7.fhir.r5.context.ILoggingService logger) {
     this.logger = logger;
   }
 
@@ -2816,7 +2816,7 @@ public abstract class BaseWorkerContext extends I18nBase implements IWorkerConte
   }
 
   @Override
-  public ILoggingService getLogger() {
+  public org.hl7.fhir.r5.context.ILoggingService getLogger() {
     return logger;
   }
 

org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/context/IWorkerContext.java

@@ -109,6 +109,18 @@ import javax.annotation.Nonnull;
 
 public interface IWorkerContext {
 
+  /**
+   @deprecated This interface only exists to provide backward compatibility for the following two projects:
+   <a href="https://github.com/cqframework/clinical-reasoning">clinical-reasoning</a>
+   <a href="https://github.com/cqframework/clinical_quality_language/">clinical_quality-language</a>
+
+   Due to a circular dependency, they cannot be updated without a release of HAPI, which requires backwards
+   compatibility with core version 6.1.2.2
+   **/
+  @Deprecated(forRemoval = true)
+  public interface ILoggingService extends org.hl7.fhir.r5.context.ILoggingService{
+
+  }
   public class OIDDefinitionComparer implements Comparator<OIDDefinition> {
 
     @Override
@@ -630,8 +642,8 @@ public interface IWorkerContext {
   // todo: figure these out
   public Map<String, NamingSystem> getNSUrlMap();
 
-  public void setLogger(@Nonnull ILoggingService logger);
-  public ILoggingService getLogger();
+  public void setLogger(@Nonnull org.hl7.fhir.r5.context.ILoggingService logger);
+  public org.hl7.fhir.r5.context.ILoggingService getLogger();
 
   public boolean isNoTerminologyServer();
   public Set<String> getCodeSystemsUsed();

org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/context/SimpleWorkerContext.java

@@ -214,7 +214,7 @@ public class SimpleWorkerContext extends BaseWorkerContext implements IWorkerCon
     private final boolean allowLoadingDuplicates;
 
     @With
-    private final ILoggingService loggingService;
+    private final org.hl7.fhir.r5.context.ILoggingService loggingService;
 
     public SimpleWorkerContextBuilder() {
       cacheTerminologyClientErrors = false;

org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/model/ExpressionNode.java

@@ -0,0 +1,228 @@
+package org.hl7.fhir.r5.model;
+
+import org.hl7.fhir.r5.fhirpath.TypeDetails;
+import org.hl7.fhir.utilities.SourceLocation;
+
+import java.util.List;
+
+/**
+ @deprecated This interface only exists to provide backward compatibility for the following two projects:
+ <a href="https://github.com/cqframework/clinical-reasoning">clinical-reasoning</a>
+ <a href="https://github.com/cqframework/clinical_quality_language/">clinical_quality-language</a>
+
+ Due to a circular dependency, they cannot be updated without a release of HAPI, which requires backwards
+ compatibility with core version 6.1.2.2
+ **/
+public class ExpressionNode extends org.hl7.fhir.r5.fhirpath.ExpressionNode{
+
+  private final org.hl7.fhir.r5.fhirpath.ExpressionNode wrappedExpressionNode;
+  public ExpressionNode(int uniqueId) {
+    super(0);
+    wrappedExpressionNode = new org.hl7.fhir.r5.fhirpath.ExpressionNode(uniqueId);
+  }
+
+  public ExpressionNode(org.hl7.fhir.r5.fhirpath.ExpressionNode wrappedExpressionNode) {
+    super(0);
+    this.wrappedExpressionNode = wrappedExpressionNode;
+  }
+
+  @Override
+  public String toString() {
+    return wrappedExpressionNode.toString();
+  }
+
+  @Override
+  public String getName() {
+    return wrappedExpressionNode.getName();
+  }
+
+  @Override
+  public void setName(String name) {
+    wrappedExpressionNode.setName(name);
+  }
+
+  @Override
+  public Base getConstant() {
+    return wrappedExpressionNode.getConstant();
+  }
+
+  @Override
+  public void setConstant(Base constant) {
+    wrappedExpressionNode.setConstant(constant);
+  }
+
+  @Override
+  public Function getFunction() {
+    return wrappedExpressionNode.getFunction();
+  }
+
+  @Override
+  public void setFunction(Function function) {
+    wrappedExpressionNode.setFunction(function);
+  }
+
+  @Override
+  public boolean isProximal() {
+    return wrappedExpressionNode.isProximal();
+  }
+
+  @Override
+  public void setProximal(boolean proximal) {
+    wrappedExpressionNode.setProximal(proximal);
+  }
+
+  @Override
+  public Operation getOperation() {
+    return wrappedExpressionNode.getOperation();
+  }
+
+  @Override
+  public void setOperation(Operation operation) {
+    wrappedExpressionNode.setOperation(operation);
+  }
+
+  @Override
+  public org.hl7.fhir.r5.fhirpath.ExpressionNode getInner() {
+    return wrappedExpressionNode.getInner();
+  }
+
+  @Override
+  public void setInner(org.hl7.fhir.r5.fhirpath.ExpressionNode value) {
+    wrappedExpressionNode.setInner(value);
+  }
+
+  @Override
+  public org.hl7.fhir.r5.fhirpath.ExpressionNode getOpNext() {
+    return wrappedExpressionNode.getOpNext();
+  }
+
+  @Override
+  public void setOpNext(org.hl7.fhir.r5.fhirpath.ExpressionNode value) {
+    wrappedExpressionNode.setOpNext(value);
+  }
+
+  @Override
+  public List<org.hl7.fhir.r5.fhirpath.ExpressionNode> getParameters() {
+    return wrappedExpressionNode.getParameters();
+  }
+
+  @Override
+  public boolean checkName() {
+    return wrappedExpressionNode.checkName();
+  }
+
+  @Override
+  public Kind getKind() {
+    return wrappedExpressionNode.getKind();
+  }
+
+  @Override
+  public void setKind(Kind kind) {
+    wrappedExpressionNode.setKind(kind);
+  }
+
+  @Override
+  public org.hl7.fhir.r5.fhirpath.ExpressionNode getGroup() {
+    return wrappedExpressionNode.getGroup();
+  }
+
+  @Override
+  public void setGroup(org.hl7.fhir.r5.fhirpath.ExpressionNode group) {
+    wrappedExpressionNode.setGroup(group);
+  }
+
+  @Override
+  public SourceLocation getStart() {
+    return wrappedExpressionNode.getStart();
+  }
+
+  @Override
+  public void setStart(SourceLocation start) {
+    wrappedExpressionNode.setStart(start);
+  }
+
+  @Override
+  public SourceLocation getEnd() {
+    return wrappedExpressionNode.getEnd();
+  }
+
+  @Override
+  public void setEnd(SourceLocation end) {
+    wrappedExpressionNode.setEnd(end);
+  }
+
+  @Override
+  public SourceLocation getOpStart() {
+    return wrappedExpressionNode.getOpStart();
+  }
+
+  @Override
+  public void setOpStart(SourceLocation opStart) {
+    wrappedExpressionNode.setOpStart(opStart);
+  }
+
+  @Override
+  public SourceLocation getOpEnd() {
+    return wrappedExpressionNode.getOpEnd();
+  }
+
+  @Override
+  public void setOpEnd(SourceLocation opEnd) {
+    wrappedExpressionNode.setOpEnd(opEnd);
+  }
+
+  @Override
+  public String getUniqueId() {
+    return wrappedExpressionNode.getUniqueId();
+  }
+
+  @Override
+  public int parameterCount() {
+    return wrappedExpressionNode.parameterCount();
+  }
+
+  @Override
+  public String Canonical() {
+    return wrappedExpressionNode.Canonical();
+  }
+
+  @Override
+  public String summary() {
+    return wrappedExpressionNode.summary();
+  }
+
+  @Override
+  public String check() {
+    return wrappedExpressionNode.check();
+  }
+
+  @Override
+  public TypeDetails getTypes() {
+    return wrappedExpressionNode.getTypes();
+  }
+
+  @Override
+  public void setTypes(TypeDetails types) {
+    wrappedExpressionNode.setTypes(types);
+  }
+
+  @Override
+  public TypeDetails getOpTypes() {
+    return wrappedExpressionNode.getOpTypes();
+  }
+
+  @Override
+  public void setOpTypes(TypeDetails opTypes) {
+    wrappedExpressionNode.setOpTypes(opTypes);
+  }
+
+  @Override
+  public List<String> getDistalNames() {
+    return wrappedExpressionNode.getDistalNames();
+  }
+
+  @Override
+  public boolean isNullSet() {
+    return wrappedExpressionNode.isNullSet();
+  }
+}

org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/utils/FHIRPathEngine.java

@@ -0,0 +1,30 @@
+package org.hl7.fhir.r5.utils;
+
+import org.hl7.fhir.r5.context.IWorkerContext;
+import org.hl7.fhir.r5.model.Base;
+
+import java.util.List;
+
+/**
+ @deprecated This interface only exists to provide backward compatibility for the following two projects:
+ <a href="https://github.com/cqframework/clinical-reasoning">clinical-reasoning</a>
+ <a href="https://github.com/cqframework/clinical_quality_language/">clinical_quality-language</a>
+
+ Due to a circular dependency, they cannot be updated without a release of HAPI, which requires backwards
+ compatibility with core version 6.1.2.2
+ **/
+public class FHIRPathEngine  extends  org.hl7.fhir.r5.fhirpath.FHIRPathEngine {
+
+  public interface IEvaluationContext extends org.hl7.fhir.r5.fhirpath.FHIRPathEngine.IEvaluationContext{ }
+  public FHIRPathEngine(IWorkerContext worker) {
+    super(worker);
+  }
+
+  public org.hl7.fhir.r5.model.ExpressionNode parse(String string) {
+    return new org.hl7.fhir.r5.model.ExpressionNode(super.parse(string));
+  }
+
+  public List<Base> evaluate(Base base, org.hl7.fhir.r5.model.ExpressionNode expressionNode) {
+    return super.evaluate(base, expressionNode);
+  }
+}

org.hl7.fhir.utilities/src/main/java/org/hl7/fhir/utilities/CanonicalPair.java

@@ -1,26 +1,82 @@
 package org.hl7.fhir.utilities;
 
+import org.apache.commons.lang3.StringUtils;
+
+/**
+ * Abstraction that splits a canonical in form of {@code <url>|<version>} into a URL and a version part.
+ */
 public class CanonicalPair {
 
-  private String url;
-  private String version;
+  private final String url;
+  private final String version;
   
+  /**
+   * Static factory method, that invokes the {@link CanonicalPair#CanonicalPair(String) CanonicalPair constructor}
+   * with the given argument.
+   * @param target the canonical to be split. May be {@code null}.
+   * @return new instance of CanonicalPair
+   */
+  public static CanonicalPair of(String target) {
+    return new CanonicalPair(target);
+  }
+
+  /**
+   * Wraps the given canonical and if needed splits off the version part.<p>
+   * The given parameter {@code target} is expected to be a canonical.
+   * @param target canonical to create a url, version pair from. May be {@code null}.
+   */
   public CanonicalPair(String target) {
-    if (target != null && target.contains("|")) {
-      this.url = target.substring(0, target.indexOf("|"));
-      this.version = target.substring(target.indexOf("|")+1);     
+    int pipeIndex = target != null ? target.indexOf('|') : -1;
+    if (pipeIndex >= 0) {
+      this.url = target.substring(0, pipeIndex);
+      this.version = target.substring(pipeIndex+1);
     } else {
       this.url = target;
       this.version = null;
     }
   }
 
+  /**
+   * Returns the URL part  of the canonical (everything before the {@code "|"} character, or the complete
+   * canonical if the character is not present). If the source 
+   * @return URL part of the source canonical. May be {@code null}, if source canonical was {@code null}
+   */
   public String getUrl() {
     return url;
   }
 
+  /**
+   * Returns the version part of the source canonical (everything after the {@code "|"} character.
+   * @return version part of the canonical, may be {@code null}, if canonical was {@code null}, or canonical contains no 
+   *   {@code "|"} character.
+   */
   public String getVersion() {
     return version;
   }
 
+  /**
+   * Determines if the version part of the canonical is not {@code null}
+   * @return {@code true} if version is not {@code null}, otherwise {@code false}
+   */
+  public boolean hasVersion() {
+    return version != null;
+  }
+
+  /**
+   * Returns the version of this pair, or the parameter {@code alternative},
+   * if the version of this pair is {@code null}.
+   * @param alternative to be returned from this method if the encapsulated version is {@code null}.
+   * @return either the held version, or {@code alternative}, if version is {@code null}
+   */
+  public String getVersionOr(String alternative) {
+    return hasVersion() ? version : alternative;
+  }
+
+  /**
+   * Determines if the encapsulated version of this pair is not {@code null} and not an empty string.
+   * @return {@code true} if the version of this pair is not {@code null} and not an empty string, {@code false} otherwise
+   */
+  public boolean hasNonEmptyVersion() {
+    return StringUtils.isNotEmpty(version);
+  }
 }

org.hl7.fhir.utilities/src/main/java/org/hl7/fhir/utilities/TerminologyServiceOptions.java

@@ -1,7 +1,7 @@
-package org.hl7.fhir.utilities;
-
-import org.hl7.fhir.utilities.validation.ValidationOptions;
-
+package org.hl7.fhir.utilities;
+
+import org.hl7.fhir.utilities.validation.ValidationOptions;
+
 /*
   Copyright (c) 2011+, HL7, Inc.
   All rights reserved.
@@ -30,21 +30,23 @@ import org.hl7.fhir.utilities.validation.ValidationOptions;
   POSSIBILITY OF SUCH DAMAGE.
   
  */
-
-
-/**
- * This class is superceded by TerminologyValidationOptions but retained here for backwards compatibility
- * @author graha
- *
- */
-public class TerminologyServiceOptions extends ValidationOptions {
-
-  public TerminologyServiceOptions(FhirPublication fhirVersion) {
-    super(fhirVersion);
-  }
-  
-  public TerminologyServiceOptions(FhirPublication fhirVersion, String lang) {
-    super(fhirVersion, lang);
-  }
-  
+
+
+/**
+ * This class is superceded by TerminologyValidationOptions but retained here for backwards compatibility
+ * @author graha
+ *
+ */
+public class TerminologyServiceOptions extends ValidationOptions {
+
+  public TerminologyServiceOptions() { this(FhirPublication.R5); }
+
+  public TerminologyServiceOptions(FhirPublication fhirVersion) {
+    super(fhirVersion);
+  }
+  
+  public TerminologyServiceOptions(FhirPublication fhirVersion, String lang) {
+    super(fhirVersion, lang);
+  }
+  
 }

org.hl7.fhir.utilities/src/main/java/org/hl7/fhir/utilities/validation/ValidationOptions.java

@@ -25,6 +25,8 @@ public class ValidationOptions {
   private boolean exampleOK = false;
   private FhirPublication fhirVersion;
 
+  public ValidationOptions() { this(FhirPublication.R5); }
+
   public ValidationOptions(FhirPublication fhirVersion) {
     super();
     this.fhirVersion = fhirVersion;

org.hl7.fhir.utilities/src/test/java/org/hl7/fhir/utilities/CanonicalPairTest.java

@@ -0,0 +1,90 @@
+package org.hl7.fhir.utilities;
+
+import static org.junit.jupiter.api.Assertions.*;
+
+import org.junit.jupiter.api.Test;
+
+class CanonicalPairTest {
+
+  @Test
+  void testCanonicalNull() {
+    var canonical = new CanonicalPair(null);
+    assertNull(canonical.getUrl());
+    assertNull(canonical.getVersion());
+    assertFalse(canonical.hasVersion());
+    assertFalse(canonical.hasNonEmptyVersion());
+    String expectedVer = "1.0";
+    String actualVer = canonical.getVersionOr(expectedVer);
+    assertEquals(expectedVer, actualVer);
+  }
+  
+  @Test
+  void testCanonicalEmpty() {
+    var url = "";
+    var canonical = new CanonicalPair(url);
+    assertEquals(url, canonical.getUrl());
+    assertFalse(canonical.hasVersion());
+    assertFalse(canonical.hasNonEmptyVersion());
+    String expectedVer = "1.0";
+    String actualVer = canonical.getVersionOr(expectedVer);
+    assertEquals(expectedVer, actualVer);
+  }
+  
+  @Test
+  void testCanonicalWithoutVersion() {
+    var url = "https://www.test.org";
+    var canonical = new CanonicalPair(url);
+    assertEquals(url, canonical.getUrl());
+    assertNull(canonical.getVersion());
+    assertFalse(canonical.hasVersion());
+    assertFalse(canonical.hasNonEmptyVersion());
+    String expectedVer = "1.0";
+    String actualVer = canonical.getVersionOr(expectedVer);
+    assertEquals(expectedVer, actualVer);
+  }
+  
+  @Test
+  void testCanonicalWithEmptyVersion() {
+    var expectedUrl = "https://www.test.org";
+    var url = expectedUrl + "|";
+    var canonical = new CanonicalPair(url);
+    assertEquals(expectedUrl, canonical.getUrl());
+    assertEquals("", canonical.getVersion());
+    assertTrue(canonical.hasVersion());
+    assertFalse(canonical.hasNonEmptyVersion());
+    String alternativeVer = "1.0";
+    String actualVer = canonical.getVersionOr(alternativeVer);
+    assertEquals("", actualVer);
+  }
+
+  @Test
+  void testCanonicalWithVersion() {
+    var expectedUrl = "https://www.test.org";
+    var expectedVersion = "2.6";
+    var url = expectedUrl + "|" + expectedVersion;
+    var canonical = new CanonicalPair(url);
+    assertEquals(expectedUrl, canonical.getUrl());
+    assertEquals(expectedVersion, canonical.getVersion());
+    assertTrue(canonical.hasVersion());
+    assertTrue(canonical.hasNonEmptyVersion());
+    String alternativeVer = "1.0";
+    String actualVer = canonical.getVersionOr(alternativeVer);
+    assertEquals(expectedVersion, actualVer);
+  }
+
+  @Test
+  void testCanonicalWithVersionIncludingPipe() {
+    var expectedUrl = "https://www.test.org";
+    var expectedVersion = "2024|05";
+    var url = expectedUrl + "|" + expectedVersion;
+    var canonical = new CanonicalPair(url);
+    assertEquals(expectedUrl, canonical.getUrl());
+    assertEquals(expectedVersion, canonical.getVersion());
+    assertTrue(canonical.hasVersion());
+    assertTrue(canonical.hasNonEmptyVersion());
+    String alternativeVer = "1.0";
+    String actualVer = canonical.getVersionOr(alternativeVer);
+    assertEquals(expectedVersion, actualVer);
+  }
+  
+}

org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/BaseValidator.java

@@ -1428,25 +1428,7 @@ public class BaseValidator implements IValidationContextResourceLoader {
     return null;
   }
   
-  protected String versionFromCanonical(String system) {
-    if (system == null) {
-      return null;
-    } else if (system.contains("|")) {
-      return system.substring(0, system.indexOf("|"));
-    } else {
-      return system;
-    }
-  }
 
-  protected String systemFromCanonical(String system) {
-    if (system == null) {
-      return null;
-    } else if (system.contains("|")) {
-      return system.substring(system.indexOf("|")+1);
-    } else {
-      return system;
-    }
-  }
   
   @Override
   public Resource loadContainedResource(List<ValidationMessage> errors, String path, Element resource, String id, Class<? extends Resource> class1) throws FHIRException {

org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/instance/InstanceValidator.java

@@ -1456,9 +1456,9 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
                   timeTracker.tx(t, "vc "+cc.toString());
                 }
               }
-            } catch (Exception e) {
-              if (STACK_TRACE) e.printStackTrace();
-              warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT, e.getMessage());
+            } catch (CheckCodeOnServerException e) {
+              if (STACK_TRACE) e.getCause().printStackTrace();
+              warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT, e.getCause().getMessage());
             }
           }
         } else if (binding.hasValueSet()) {
@@ -1469,12 +1469,17 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
       } 
     }
     if (!noTerminologyChecks && theElementCntext != null && !checked) { // no binding check, so we just check the CodeableConcept generally
-      CodeableConcept cc = ObjectConverter.readAsCodeableConcept(element);
-      if (cc.hasCoding()) {
-        long t = System.nanoTime();
-        ValidationResult vr = checkCodeOnServer(stack, null, cc);
-        bh.see(processTxIssues(errors, vr, element, path, org.hl7.fhir.r5.model.OperationOutcome.IssueSeverity.INFORMATION, false, null));
-        timeTracker.tx(t, "vc "+cc.toString());
+      try {
+        CodeableConcept cc = ObjectConverter.readAsCodeableConcept(element);
+        if (cc.hasCoding()) {
+          long t = System.nanoTime();
+          ValidationResult vr = checkCodeOnServer(stack, null, cc);
+          bh.see(processTxIssues(errors, vr, element, path, org.hl7.fhir.r5.model.OperationOutcome.IssueSeverity.INFORMATION, false, null));
+          timeTracker.tx(t, "vc " + cc.toString());
+        }
+      } catch (CheckCodeOnServerException e) {
+        if (STACK_TRACE) e.getCause().printStackTrace();
+        warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT, e.getCause().getMessage());
       }
     }
     return checkDisp;
@@ -1502,8 +1507,8 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
     boolean ok = true;
     if (vr != null) {
       for (OperationOutcomeIssueComponent iss : vr.getIssues()) {
-        if (!iss.getDetails().hasCoding("http://hl7.org/fhir/tools/CodeSystem/tx-issue-type", "not-in-vs") && 
-            !iss.getDetails().hasCoding("http://hl7.org/fhir/tools/CodeSystem/tx-issue-type", "this-code-not-in-vs")
+        if (!iss.getDetails().hasCoding("http://hl7.org/fhir/tools/CodeSystem/tx-issue-type", "not-in-vs")
+            && !iss.getDetails().hasCoding("http://hl7.org/fhir/tools/CodeSystem/tx-issue-type", "this-code-not-in-vs")
             && !(ignoreCantInfer || iss.getDetails().hasCoding("http://hl7.org/fhir/tools/CodeSystem/tx-issue-type", "cannot-infer"))) {
           OperationOutcomeIssueComponent i = iss.copy();
           if (notFoundLevel != null && i.getDetails().hasCoding("http://hl7.org/fhir/tools/CodeSystem/tx-issue-type", "not-found")) { 
@@ -1653,9 +1658,9 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
                   timeTracker.tx(t, DataRenderer.display(context, cc));
                 }
               }
-            } catch (Exception e) {
-              if (STACK_TRACE) e.printStackTrace();
-              warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT, e.getMessage());
+            } catch (CheckCodeOnServerException e) {
+              if (STACK_TRACE) e.getCause().printStackTrace();
+              warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT, e.getCause().getMessage());
             }
             // special case: if the logical model has both CodeableConcept and Coding mappings, we'll also check the first coding.
             if (getMapping("http://hl7.org/fhir/terminology-pattern", logical, logical.getSnapshot().getElementFirstRep()).contains("Coding")) {
@@ -1861,9 +1866,9 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
           else
             ok = txRule(errors, NO_RULE_DATE, vr.getTxLink(), IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_NOVALID_8, describeReference(maxVSUrl, valueset), ccSummary(cc)) && ok;
         }
-      } catch (Exception e) {
-        if (STACK_TRACE) e.printStackTrace();
-        warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT_MAX, e.getMessage());
+      } catch (CheckCodeOnServerException e) {
+        if (STACK_TRACE) e.getCause().printStackTrace();
+        warning(errors, NO_RULE_DATE, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT_MAX, e.getCause().getMessage());
       }
     }
     return ok;
@@ -7474,6 +7479,11 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
     return checkForInactive(filterOutSpecials(stack.getLiteralPath(), vs, context.validateCode(options, value, vs)), new CodeType(value));
   }
 
+  static class CheckCodeOnServerException extends Exception {
+    public CheckCodeOnServerException(Exception e) {
+      super(e);
+    }
+  }
 
   // no delay on this one? 
   public ValidationResult checkCodeOnServer(NodeStack stack, String code, String system, String version, String display, boolean checkDisplay) {
@@ -7490,9 +7500,13 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
     return checkForInactive(filterOutSpecials(stack.getLiteralPath(), valueset, context.validateCode(baseOptions.withLanguage(stack.getWorkingLang()), c, valueset)), c);
   }
   
-  public ValidationResult checkCodeOnServer(NodeStack stack, ValueSet valueset, CodeableConcept cc) {
+  public ValidationResult checkCodeOnServer(NodeStack stack, ValueSet valueset, CodeableConcept cc) throws CheckCodeOnServerException {
     codingObserver.seeCode(stack, cc);
-    return checkForInactive(filterOutSpecials(stack.getLiteralPath(), valueset, context.validateCode(baseOptions.withLanguage(stack.getWorkingLang()), cc, valueset)), cc);
+    try {
+      return checkForInactive(filterOutSpecials(stack.getLiteralPath(), valueset, context.validateCode(baseOptions.withLanguage(stack.getWorkingLang()), cc, valueset)), cc);
+    } catch (Exception e) {
+      throw new CheckCodeOnServerException(e);
+    }
   }
 
   private ValidationResult filterOutSpecials(String path, ValueSet vs, ValidationResult vr) {

org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/instance/type/CodeSystemValidator.java

@@ -13,6 +13,7 @@ import org.hl7.fhir.r5.model.CodeSystem;
 import org.hl7.fhir.r5.model.CodeSystem.ConceptDefinitionComponent;
 import org.hl7.fhir.r5.model.ValueSet;
 import org.hl7.fhir.r5.terminologies.CodeSystemUtilities;
+import org.hl7.fhir.utilities.CanonicalPair;
 import org.hl7.fhir.utilities.Utilities;
 import org.hl7.fhir.utilities.VersionUtilities;
 import org.hl7.fhir.utilities.i18n.I18nConstants;
@@ -620,7 +621,8 @@ public class CodeSystemValidator  extends BaseValidator {
   private boolean validateSupplementConcept(List<ValidationMessage> errors, Element concept, NodeStack stack, String supp, ValidationOptions options) {
     String code = concept.getChildValue("code");
     if (!Utilities.noString(code)) {
-      org.hl7.fhir.r5.terminologies.utilities.ValidationResult res = context.validateCode(options, systemFromCanonical(supp), versionFromCanonical(supp), code, null);
+      var canonical = new CanonicalPair(supp);
+      org.hl7.fhir.r5.terminologies.utilities.ValidationResult res = context.validateCode(options, canonical.getUrl(), canonical.getVersion(), code, null);
       return rule(errors, NO_RULE_DATE, IssueType.BUSINESSRULE, stack.getLiteralPath(), res.isOk(), I18nConstants.CODESYSTEM_CS_SUPP_INVALID_CODE, supp, code);
     } else {
       return true;

org.hl7.fhir.validation/src/test/java/org/hl7/fhir/validation/ResourceValidationTests.java

@@ -1,5 +1,9 @@
 package org.hl7.fhir.validation;
 
+import static org.hamcrest.Matchers.is;
+import static org.hamcrest.Matchers.empty;
+import static org.hamcrest.MatcherAssert.assertThat;
+
 import java.io.FileNotFoundException;
 import java.io.IOException;
 import java.util.ArrayList;
@@ -10,6 +14,7 @@ import org.hl7.fhir.r5.formats.XmlParser;
 import org.hl7.fhir.r5.model.Resource;
 import org.hl7.fhir.r5.test.utils.TestingUtilities;
 import org.hl7.fhir.utilities.FhirPublication;
+import org.hl7.fhir.utilities.i18n.I18nConstants;
 import org.hl7.fhir.utilities.settings.FhirSettings;
 import org.hl7.fhir.utilities.validation.ValidationMessage;
 import org.hl7.fhir.validation.instance.InstanceValidator;
@@ -25,7 +30,7 @@ public class ResourceValidationTests {
   private static InstanceValidator val;
 
 
-  private void runTest(String filename) throws IOException, FileNotFoundException, Exception {
+  private List<ValidationMessage> runTest(String filename) throws IOException, FileNotFoundException, Exception {
     TestingUtilities.injectCorePackageLoader();
     if (val == null) {
       ctxt = TestingUtilities.getSharedWorkerContext();
@@ -37,6 +42,7 @@ public class ResourceValidationTests {
     Resource res = (Resource) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", filename));
     val.validate(val, errors, res);
     Assertions.assertNotNull(errors);
+    return errors;
   }
 
 
@@ -123,4 +129,26 @@ public class ResourceValidationTests {
   }
 
   
-}
+  @Test
+  public void testCodesystemSupplementsVersion() throws Exception {
+    List<ValidationMessage> errors = runTest("codesystem-example-supplement-version.xml");
+    assertNoErrors(errors);
+  }
+
+
+  private void assertNoErrors(List<ValidationMessage> errors) {
+    List<String> errorMessages = new ArrayList<>();
+    for(ValidationMessage message : errors) {
+      // we will skip the message that WG citation is needed
+      if(I18nConstants.VALIDATION_HL7_WG_NEEDED.equals(message.getMessageId())) {
+        continue;
+      }
+      if(message.getLevel().isError()) {
+        errorMessages.add(message.getMessage());
+      }
+    }
+    assertThat("No error message expected in validation outcome.", errorMessages, is(empty()));
+  }
+
+
+}