honeymoose
/
org.hl7.fhir.core
mirror of https://github.com/hapifhir/org.hl7.fhir.core.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity

Fix system path for FileSystemPackageCacheManager

This commit is contained in:
dotasek 2023-09-05 15:35:21 -04:00
parent 8d8e6e188e
commit 82813a88d2
9 changed files with 84 additions and 58 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

68
org.hl7.fhir.dstu3/src/main/java/org/hl7/fhir/dstu3/utils/StructureMapUtilities.java
View File

@ -1,33 +1,33 @@
package org.hl7.fhir.dstu3.utils;
/*
Copyright (c) 2011+, HL7, Inc.
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
* Neither the name of HL7 nor the names of its contributors may be used to
endorse or promote products derived from this software without specific
prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
*/
/*
Copyright (c) 2011+, HL7, Inc.
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
* Neither the name of HL7 nor the names of its contributors may be used to
endorse or promote products derived from this software without specific
prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
*/
@ -160,7 +160,7 @@ public class StructureMapUtilities {
public List<Base> performSearch(Object appContext, String url);
}
private class FFHIRPathHostServices implements IEvaluationContext{
private class FHIRPathHostServices implements IEvaluationContext{
public Base resolveConstant(Object appContext, String name) throws PathEngineException {
Variables vars = (Variables) appContext;
@ -223,7 +223,7 @@ public class StructureMapUtilities {
this.services = services;
this.pkp = pkp;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public StructureMapUtilities(IWorkerContext worker, Map<String, StructureMap> library, ITransformerServices services) {
@ -232,7 +232,7 @@ public class StructureMapUtilities {
this.library = library;
this.services = services;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public StructureMapUtilities(IWorkerContext worker, Map<String, StructureMap> library) {
@ -240,14 +240,14 @@ public class StructureMapUtilities {
this.worker = worker;
this.library = library;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public StructureMapUtilities(IWorkerContext worker) {
super();
this.worker = worker;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public StructureMapUtilities(IWorkerContext worker, ITransformerServices services) {
@ -260,7 +260,7 @@ public class StructureMapUtilities {
}
this.services = services;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public static String render(StructureMap map) {

10
org.hl7.fhir.r4/src/main/java/org/hl7/fhir/r4/utils/StructureMapUtilities.java
View File

@ -175,7 +175,7 @@ public class StructureMapUtilities {
public List<Base> performSearch(Object appContext, String url) throws FHIRException;
}
private class FFHIRPathHostServices implements IEvaluationContext {
private class FHIRPathHostServices implements IEvaluationContext {
public List<Base> resolveConstant(Object appContext, String name, boolean beforeContext)
throws PathEngineException {
@ -241,7 +241,7 @@ public class StructureMapUtilities {
ok = ok && v.getLevel().isError();
return ok;
}
throw new NotImplementedException("Not done yet (FFHIRPathHostServices.conformsToProfile), when item is element");
throw new NotImplementedException("Not done yet (FHIRPathHostServices.conformsToProfile), when item is element");
}
@Override
@ -264,7 +264,7 @@ public class StructureMapUtilities {
this.services = services;
this.pkp = pkp;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public StructureMapUtilities(IWorkerContext worker, ITransformerServices services) {
@ -272,7 +272,7 @@ public class StructureMapUtilities {
this.worker = worker;
this.services = services;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
public StructureMapUtilities(IWorkerContext worker) {
@ -280,7 +280,7 @@ public class StructureMapUtilities {
this.worker = worker;
if (worker != null) {
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
}
}

6
org.hl7.fhir.r4b/src/main/java/org/hl7/fhir/r4b/utils/structuremap/FFHIRPathHostServices.java → org.hl7.fhir.r4b/src/main/java/org/hl7/fhir/r4b/utils/structuremap/FHIRPathHostServices.java
View File

@ -16,11 +16,11 @@ import org.hl7.fhir.utilities.validation.ValidationMessage;
import java.util.ArrayList;
import java.util.List;
public class FFHIRPathHostServices implements FHIRPathEngine.IEvaluationContext {
public class FHIRPathHostServices implements FHIRPathEngine.IEvaluationContext {
private final StructureMapUtilities structureMapUtilities;
public FFHIRPathHostServices(StructureMapUtilities structureMapUtilities) {
public FHIRPathHostServices(StructureMapUtilities structureMapUtilities) {
this.structureMapUtilities = structureMapUtilities;
}
@ -96,7 +96,7 @@ public class FFHIRPathHostServices implements FHIRPathEngine.IEvaluationContext
return noErrorValidationMessages(valerrors);
}
throw new NotImplementedException(
"Not done yet (FFHIRPathHostServices.conformsToProfile), when item is not element or not resource");
"Not done yet (FHIRPathHostServices.conformsToProfile), when item is not element or not resource");
}
@Override

10
org.hl7.fhir.r4b/src/main/java/org/hl7/fhir/r4b/utils/structuremap/StructureMapUtilities.java
View File

@ -109,7 +109,7 @@ public class StructureMapUtilities {
private static final boolean RENDER_MULTIPLE_TARGETS_ONELINE = true;
private static final String AUTO_VAR_NAME = "vvv";
private class FFHIRPathHostServices implements IEvaluationContext {
private class FHIRPathHostServices implements IEvaluationContext {
public List<Base> resolveConstant(Object appContext, String name, boolean beforeContext)
throws PathEngineException {
@ -177,7 +177,7 @@ public class StructureMapUtilities {
ok = ok && v.getLevel().isError();
return ok;
}
throw new NotImplementedException("Not done yet (FFHIRPathHostServices.conformsToProfile), when item is element");
throw new NotImplementedException("Not done yet (FHIRPathHostServices.conformsToProfile), when item is element");
}
@Override
@ -201,7 +201,7 @@ public class StructureMapUtilities {
this.services = services;
this.pkp = pkp;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
profileUtilities = new ProfileUtilities(worker, null, null);
}
@ -210,7 +210,7 @@ public class StructureMapUtilities {
this.worker = worker;
this.services = services;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
profileUtilities = new ProfileUtilities(worker, null, null);
}
@ -218,7 +218,7 @@ public class StructureMapUtilities {
super();
this.worker = worker;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices());
fpe.setHostServices(new FHIRPathHostServices());
profileUtilities = new ProfileUtilities(worker, null, null);
}

6
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/utils/structuremap/FFHIRPathHostServices.java → org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/utils/structuremap/FHIRPathHostServices.java
View File

@ -16,11 +16,11 @@ import org.hl7.fhir.utilities.validation.ValidationMessage;
import java.util.ArrayList;
import java.util.List;
public class FFHIRPathHostServices implements FHIRPathEngine.IEvaluationContext {
public class FHIRPathHostServices implements FHIRPathEngine.IEvaluationContext {
private final StructureMapUtilities structureMapUtilities;
public FFHIRPathHostServices(StructureMapUtilities structureMapUtilities) {
public FHIRPathHostServices(StructureMapUtilities structureMapUtilities) {
this.structureMapUtilities = structureMapUtilities;
}
@ -92,7 +92,7 @@ public class FFHIRPathHostServices implements FHIRPathEngine.IEvaluationContext
val.validate(appContext, valerrors, null, (Element) item, url);
return noErrorValidationMessages(valerrors);
}
throw new NotImplementedException("Not done yet (FFHIRPathHostServices.conformsToProfile), when item is not element or not resource");
throw new NotImplementedException("Not done yet (FHIRPathHostServices.conformsToProfile), when item is not element or not resource");
}
@Override

6
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/utils/structuremap/StructureMapUtilities.java
View File

@ -116,7 +116,7 @@ public class StructureMapUtilities {
this.services = services;
this.pkp = pkp;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices(this));
fpe.setHostServices(new FHIRPathHostServices(this));
profileUtilities = new ProfileUtilities(worker, null, null);
}
@ -125,7 +125,7 @@ public class StructureMapUtilities {
this.worker = worker;
this.services = services;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices(this));
fpe.setHostServices(new FHIRPathHostServices(this));
profileUtilities = new ProfileUtilities(worker, null, null);
}
@ -133,7 +133,7 @@ public class StructureMapUtilities {
super();
this.worker = worker;
fpe = new FHIRPathEngine(worker);
fpe.setHostServices(new FFHIRPathHostServices(this));
fpe.setHostServices(new FHIRPathHostServices(this));
profileUtilities = new ProfileUtilities(worker, null, null);
}

4
org.hl7.fhir.r5/src/test/java/org/hl7/fhir/r5/utils/structuremap/FFHIRPathHostServicesTest.java → org.hl7.fhir.r5/src/test/java/org/hl7/fhir/r5/utils/structuremap/FHIRPathHostServicesTest.java
View File

@ -11,7 +11,7 @@ import org.junit.jupiter.api.Assertions;
import org.junit.jupiter.api.BeforeAll;
import org.junit.jupiter.api.Test;
class FFHIRPathHostServicesTest {
class FHIRPathHostServicesTest {
static private SimpleWorkerContext context;
@BeforeAll
@ -23,7 +23,7 @@ class FFHIRPathHostServicesTest {
@Test
public void testrResolveValueSet() throws IOException, FHIRException {
StructureMapUtilities scu = new StructureMapUtilities(context);
FFHIRPathHostServices fphs = new FFHIRPathHostServices(scu);
FHIRPathHostServices fphs = new FHIRPathHostServices(scu);
ValueSet v = fphs.resolveValueSet(null, "http://hl7.org/fhir/ValueSet/FHIR-version");
Assertions.assertNotNull(v);
Assertions.assertEquals("http://hl7.org/fhir/ValueSet/FHIR-version", v.getUrl());

13
org.hl7.fhir.utilities/src/main/java/org/hl7/fhir/utilities/npm/FilesystemPackageCacheManager.java
View File

@ -146,7 +146,7 @@ public class FilesystemPackageCacheManager extends BasePackageCacheManager imple
switch (mode) {
case SYSTEM:
cacheFolder = new File(Utilities.path("var", "lib", ".fhir", "packages"));
cacheFolder = new File(Utilities.path("/var", "lib", ".fhir", "packages"));
break;
case USER:
cacheFolder = new File(Utilities.path(System.getProperty("user.home"), ".fhir", "packages"));
@ -162,10 +162,17 @@ public class FilesystemPackageCacheManager extends BasePackageCacheManager imple
break;
}
initCacheFolder();
}
protected void initCacheFolder() throws IOException {
if (!(cacheFolder.exists()))
Utilities.createDirectory(cacheFolder.getAbsolutePath());
if (!(new File(Utilities.path(cacheFolder, "packages.ini")).exists()))
TextFile.stringToFile("[cache]\r\nversion=" + CACHE_VERSION + "\r\n\r\n[urls]\r\n\r\n[local]\r\n\r\n", Utilities.path(cacheFolder, "packages.ini"), false);
String packagesIniPath = Utilities.path(cacheFolder, "packages.ini");
File packagesIniFile = new File(packagesIniPath);
if (!(packagesIniFile.exists()))
packagesIniFile.createNewFile();
TextFile.stringToFile("[cache]\r\nversion=" + CACHE_VERSION + "\r\n\r\n[urls]\r\n\r\n[local]\r\n\r\n", packagesIniPath, false);
createIniFile();
for (File f : cacheFolder.listFiles()) {
if (f.isDirectory() && Utilities.isValidUUID(f.getName())) {

19
org.hl7.fhir.utilities/src/test/java/org/hl7/fhir/utilities/npm/FilesystemPackageManagerTests.java
View File

@ -2,6 +2,7 @@ package org.hl7.fhir.utilities.npm;
import static org.junit.jupiter.api.Assertions.assertEquals;
import java.io.File;
import java.io.IOException;
import java.util.List;
@ -64,4 +65,22 @@ public class FilesystemPackageManagerTests {
}
};
}
@Test
public void testUserCacheDirectory() throws IOException {
FilesystemPackageCacheManager filesystemPackageCacheManager = new FilesystemPackageCacheManager(true) {
protected void initCacheFolder() throws IOException {
}
};
assertEquals(System.getProperty("user.home") + File.separator + ".fhir/packages", filesystemPackageCacheManager.getFolder());
}
@Test
public void testSystemCacheDirectory() throws IOException {
FilesystemPackageCacheManager filesystemPackageCacheManager = new FilesystemPackageCacheManager(false) {
protected void initCacheFolder() throws IOException {
}
};
assertEquals( "/var/lib/.fhir/packages", filesystemPackageCacheManager.getFolder());
}
}