Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into utilities_test_cases

This commit is contained in:
markiantorno 2020-06-02 09:28:28 -04:00
commit 8a7737cac0
7 changed files with 196 additions and 57 deletions

View File

@ -309,7 +309,9 @@ public abstract class BaseWorkerContext extends I18nBase implements IWorkerConte
for (ElementDefinition ed : sd.getDifferential().getElement()) {
if (ed.getPath().equals("Extension.url") || ed.getPath().endsWith(".extension.url") ) {
ed.setMin(1);
ed.getBase().setMin(1);
if (ed.hasBase()) {
ed.getBase().setMin(1);
}
}
if ("extension".equals(ed.getSliceName())) {
ed.setSliceName(null);

View File

@ -79,6 +79,15 @@ private Map<String, Object> userData;
return (Integer) getUserData(name);
}
public void copyUserData(Base other) {
if (other.userData != null) {
if (userData == null) {
userData = new HashMap<>();
}
userData.putAll(other.userData);
}
}
public boolean hasFormatComment() {
return (formatCommentsPre != null && !formatCommentsPre.isEmpty()) || (formatCommentsPost != null && !formatCommentsPost.isEmpty());
}

View File

@ -73,8 +73,10 @@ public class ExpressionNode {
First, Last, Tail, Skip, Take, Union, Combine, Intersect, Exclude, Iif, Upper, Lower, ToChars, IndexOf, Substring, StartsWith, EndsWith, Matches, ReplaceMatches, Contains, Replace, Length,
Children, Descendants, MemberOf, Trace, Check, Today, Now, Resolve, Extension, AllFalse, AnyFalse, AllTrue, AnyTrue,
HasValue, OfType, Type, ConvertsToBoolean, ConvertsToInteger, ConvertsToString, ConvertsToDecimal, ConvertsToQuantity, ConvertsToDateTime, ConvertsToTime, ToBoolean, ToInteger, ToString, ToDecimal, ToQuantity, ToDateTime, ToTime, ConformsTo,
// R3 functions
Encode, Decode, Escape, Trim, Split, Join,
// Local extensions to FHIRPath
HtmlChecks, AliasAs, Alias, fromBase64, toBase64;
HtmlChecks, AliasAs, Alias;
public static Function fromCode(String name) {
if (name.equals("empty")) return Function.Empty;
@ -134,8 +136,12 @@ public class ExpressionNode {
if (name.equals("aliasAs")) return Function.AliasAs;
if (name.equals("htmlChecks")) return Function.HtmlChecks;
if (name.equals("htmlchecks")) return Function.HtmlChecks; // support change of care from R3
if (name.equals("fromBase64")) return Function.fromBase64;
if (name.equals("toBase64")) return Function.toBase64;
if (name.equals("encode")) return Function.Encode;
if (name.equals("decode")) return Function.Decode;
if (name.equals("escape")) return Function.Escape;
if (name.equals("trim")) return Function.Trim;
if (name.equals("split")) return Function.Split;
if (name.equals("join")) return Function.Join;
if (name.equals("ofType")) return Function.OfType;
if (name.equals("type")) return Function.Type;
if (name.equals("toInteger")) return Function.ToInteger;
@ -212,8 +218,12 @@ public class ExpressionNode {
case HasValue : return "hasValue";
case Alias : return "alias";
case AliasAs : return "aliasAs";
case fromBase64 : return "fromBase64";
case toBase64 : return "toBase64";
case Encode : return "encode";
case Decode : return "decode";
case Escape : return "escape";
case Trim : return "trim";
case Split : return "split";
case Join : return "join";
case HtmlChecks : return "htmlChecks";
case OfType : return "ofType";
case Type : return "type";

View File

@ -69,8 +69,12 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
model.getTitles().add(gen.new Title(null, model.getDocoRef(), translate("sd.head", "Description & Constraints"), translate("sd.hint", "Additional information about the item"), null, 0));
boolean hasExt = false;
for (QuestionnaireItemComponent i : q.getItem()) {
hasExt = renderTreeItem(gen, model.getRows(), q, i) || hasExt;
if (!q.hasItem()) {
gen.emptyRow(model, 6);
} else {
for (QuestionnaireItemComponent i : q.getItem()) {
hasExt = renderTreeItem(gen, model.getRows(), q, i) || hasExt;
}
}
XhtmlNode xn = gen.generate(model, context.getLocalPrefix(), 1, null);
x.getChildNodes().add(xn);
@ -83,7 +87,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
boolean hasExt = false;
r.setIcon("icon-q-"+i.getType().toCode()+".png", i.getType().getDisplay());
r.getCells().add(gen.new Cell(null, context.getDefinitionsTarget() == null ? "" : context.getDefinitionsTarget()+"-definitions.html#extension."+i.getLinkId(), i.getLinkId(), null, null));
r.getCells().add(gen.new Cell(null, context.getDefinitionsTarget() == null ? "" : context.getDefinitionsTarget()+"#item."+i.getLinkId(), i.getLinkId(), null, null));
String txt = (i.hasPrefix() ? i.getPrefix() + ". " : "") + i.getText();
r.getCells().add(gen.new Cell(null, null, txt, null, null));
r.getCells().add(gen.new Cell(null, null, (i.getRequired() ? "1" : "0")+".."+(i.getRepeats() ? "*" : "1"), null, null));
@ -93,28 +97,28 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
Cell flags = gen.new Cell();
r.getCells().add(flags);
if (i.getReadOnly()) {
flags.addPiece(gen.new Piece(Utilities.pathURL(context.getSpecificationLink(), "questionnaire-definitions.html#Questionnaire.item.readOnly"), null, "Is Readonly").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-readonly.png"))));
flags.addPiece(gen.new Piece(Utilities.pathURL(context.getSpecificationLink(), "questionnaire-definitions.html#Questionnaire.item.readOnly"), null, "Is Readonly").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-readonly.png"))));
}
if (ToolingExtensions.readBoolExtension(i, "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject")) {
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject", null, "Can change the subject of the questionnaire").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-subject.png"))));
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject", null, "Can change the subject of the questionnaire").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-subject.png"))));
}
if (ToolingExtensions.readBoolExtension(i, "http://hl7.org/fhir/StructureDefinition/questionnaire-hidden")) {
flags.addPiece(gen.new Piece(Utilities.pathURL(context.getSpecificationLink(), "extension-questionnaire-hidden.html"), null, "Is a hidden item").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-hidden.png"))));
flags.addPiece(gen.new Piece(Utilities.pathURL(context.getSpecificationLink(), "extension-questionnaire-hidden.html"), null, "Is a hidden item").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-hidden.png"))));
}
if (ToolingExtensions.readBoolExtension(i, "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay")) {
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay", null, "Is optional to display").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-optional.png"))));
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay", null, "Is optional to display").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-optional.png"))));
}
if (i.hasExtension("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod")) {
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", null, "Is linked to an observation").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-observation.png"))));
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", null, "Is linked to an observation").addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-observation.png"))));
}
if (i.hasExtension("http://hl7.org/fhir/StructureDefinition/questionnaire-choiceOrientation")) {
String code = ToolingExtensions.readStringExtension(i, "http://hl7.org/fhir/StructureDefinition/questionnaire-choiceOrientation");
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", null, "Orientation: "+code).addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-"+code+".png"))));
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", null, "Orientation: "+code).addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-"+code+".png"))));
}
if (i.hasExtension("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory")) {
CodeableConcept cc = i.getExtensionByUrl("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory").getValueCodeableConcept();
String code = cc.getCode("http://hl7.org/fhir/questionnaire-display-category");
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-displayCategory", null, "Category: "+code).addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-"+code+".png"))));
flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-displayCategory", null, "Category: "+code).addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-"+code+".png"))));
}
Cell defn = gen.new Cell();
@ -143,7 +147,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
if (vs == null) {
defn.getPieces().add(gen.new Piece(null, i.getAnswerValueSet(), null));
} else {
defn.getPieces().add(gen.new Piece("todo", vs.present(), null));
defn.getPieces().add(gen.new Piece(vs.getUserString("path"), vs.present(), null));
}
} else {
ValueSet vs = context.getWorker().fetchResource(ValueSet.class, i.getAnswerValueSet());
@ -157,7 +161,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
if (i.hasAnswerOption()) {
if (!defn.getPieces().isEmpty()) defn.addPiece(gen.new Piece("br"));
defn.getPieces().add(gen.new Piece(null, "Options: ", null));
defn.getPieces().add(gen.new Piece(context.getDefinitionsTarget()+"#"+i.getLinkId(), Integer.toString(i.getAnswerOption().size())+" "+Utilities.pluralize("option", i.getAnswerOption().size()), null));
defn.getPieces().add(gen.new Piece(context.getDefinitionsTarget()+"#item."+i.getLinkId(), Integer.toString(i.getAnswerOption().size())+" "+Utilities.pluralize("option", i.getAnswerOption().size()), null));
}
if (i.hasInitial()) {
for (QuestionnaireItemInitialComponent v : i.getInitial()) {
@ -231,8 +235,12 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
model.getTitles().add(gen.new Title(null, model.getDocoRef(), translate("sd.head", "Description & Constraints"), translate("sd.hint", "Additional information about the item"), null, 0));
boolean hasExt = false;
for (QuestionnaireItemComponent i : q.getItem()) {
hasExt = renderLogicItem(gen, model.getRows(), q, i) || hasExt;
if (!q.hasItem()) {
gen.emptyRow(model, 2);
} else {
for (QuestionnaireItemComponent i : q.getItem()) {
hasExt = renderLogicItem(gen, model.getRows(), q, i) || hasExt;
}
}
XhtmlNode xn = gen.generate(model, context.getDestDir(), 1, null);
x.getChildNodes().add(xn);
@ -245,7 +253,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
boolean hasExt = false;
r.setIcon("icon-q-"+i.getType().toCode()+".png", i.getType().getDisplay());
r.getCells().add(gen.new Cell(null, context.getDefinitionsTarget() == null ? "" : context.getDefinitionsTarget()+"-definitions.html#extension."+i.getLinkId(), i.getLinkId(), null, null));
r.getCells().add(gen.new Cell(null, context.getDefinitionsTarget() == null ? "" : context.getDefinitionsTarget()+"#item."+i.getLinkId(), i.getLinkId(), null, null));
Cell defn = gen.new Cell();
r.getCells().add(defn);
@ -272,7 +280,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
if (vs == null) {
defn.getPieces().add(gen.new Piece(null, i.getAnswerValueSet(), null));
} else {
defn.getPieces().add(gen.new Piece("todo", vs.present(), null));
defn.getPieces().add(gen.new Piece(vs.getUserString("path"), vs.present(), null));
}
} else {
ValueSet vs = context.getWorker().fetchResource(ValueSet.class, i.getAnswerValueSet());
@ -286,7 +294,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
if (i.hasAnswerOption()) {
if (!defn.getPieces().isEmpty()) defn.addPiece(gen.new Piece("br"));
defn.getPieces().add(gen.new Piece(null, "Options: ", null));
defn.getPieces().add(gen.new Piece(context.getDefinitionsTarget()+"#"+i.getLinkId(), Integer.toString(i.getAnswerOption().size())+" "+Utilities.pluralize("option", i.getAnswerOption().size()), null));
defn.getPieces().add(gen.new Piece(context.getDefinitionsTarget()+"#item."+i.getLinkId(), Integer.toString(i.getAnswerOption().size())+" "+Utilities.pluralize("option", i.getAnswerOption().size()), null));
}
if (i.hasInitial()) {
for (QuestionnaireItemInitialComponent v : i.getInitial()) {
@ -459,7 +467,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
// if (i.hasExtension("http://hl7.org/fhir/StructureDefinition/questionnaire-choiceOrientation")) {
// String code = ToolingExtensions.readStringExtension(i, "http://hl7.org/fhir/StructureDefinition/questionnaire-choiceOrientation");
// flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", null, "Orientation: "+code).addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getDestDir(), "icon-qi-"+code+".png"))));
// flags.addPiece(gen.new Piece("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", null, "Orientation: "+code).addHtml(new XhtmlNode(NodeType.Element, "img").attribute("src", Utilities.path(context.getLocalPrefix(), "icon-qi-"+code+".png"))));
//}
@ -470,26 +478,26 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
if (ToolingExtensions.readBoolExtension(i, "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject")) {
hasFlag = true;
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject", "Can change the subject of the questionnaire").img(Utilities.path(context.getDestDir(), "icon-qi-subject.png"));
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject", "Can change the subject of the questionnaire").img(Utilities.path(context.getLocalPrefix(), "icon-qi-subject.png"));
}
if (ToolingExtensions.readBoolExtension(i, "http://hl7.org/fhir/StructureDefinition/questionnaire-hidden")) {
hasFlag = true;
flags.ah(Utilities.pathURL(context.getSpecificationLink(), "extension-questionnaire-hidden.html"), "Is a hidden item").img(Utilities.path(context.getDestDir(), "icon-qi-hidden.png"));
flags.ah(Utilities.pathURL(context.getSpecificationLink(), "extension-questionnaire-hidden.html"), "Is a hidden item").img(Utilities.path(context.getLocalPrefix(), "icon-qi-hidden.png"));
d.style("background-color: #eeeeee");
}
if (ToolingExtensions.readBoolExtension(i, "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay")) {
hasFlag = true;
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay", "Is optional to display").img(Utilities.path(context.getDestDir(), "icon-qi-optional.png"));
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay", "Is optional to display").img(Utilities.path(context.getLocalPrefix(), "icon-qi-optional.png"));
}
if (i.hasExtension("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod")) {
hasFlag = true;
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", "Is linked to an observation").img(Utilities.path(context.getDestDir(), "icon-qi-observation.png"));
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod", "Is linked to an observation").img(Utilities.path(context.getLocalPrefix(), "icon-qi-observation.png"));
}
if (i.hasExtension("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory")) {
CodeableConcept cc = i.getExtensionByUrl("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory").getValueCodeableConcept();
String code = cc.getCode("http://hl7.org/fhir/questionnaire-display-category");
hasFlag = true;
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-displayCategory", "Category: "+code).img(Utilities.path(context.getDestDir(), "icon-qi-"+code+".png"));
flags.ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-displayCategory", "Category: "+code).img(Utilities.path(context.getLocalPrefix(), "icon-qi-"+code+".png"));
}
if (i.hasMaxLength()) {
@ -508,7 +516,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
if (vs == null) {
ans.tx(i.getAnswerValueSet());
} else {
ans.ah("todo").tx(vs.present());
ans.ah(vs.getUserString("path")).tx(vs.present());
}
} else {
ValueSet vs = context.getWorker().fetchResource(ValueSet.class, i.getAnswerValueSet());
@ -520,7 +528,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
}
}
if (i.hasAnswerOption()) {
item(ul, "Answers", Integer.toString(i.getAnswerOption().size())+" "+Utilities.pluralize("option", i.getAnswerOption().size()), context.getDefinitionsTarget()+"#"+i.getLinkId());
item(ul, "Answers", Integer.toString(i.getAnswerOption().size())+" "+Utilities.pluralize("option", i.getAnswerOption().size()), context.getDefinitionsTarget()+"#item."+i.getLinkId());
}
if (i.hasInitial()) {
XhtmlNode vi = item(ul, "Initial Values");
@ -642,12 +650,12 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
private boolean renderDefinition(XhtmlNode tbl, Questionnaire q, QuestionnaireItemComponent qi, List<QuestionnaireItemComponent> parents) throws IOException {
boolean ext = false;
XhtmlNode td = tbl.tr().td("structure").colspan("2").span(null, null).attribute("class", "self-link-parent");
td.an(qi.getLinkId());
td.an("item."+qi.getLinkId());
for (QuestionnaireItemComponent p : parents) {
td.ah("#"+p.getLinkId()).img(Utilities.path(context.getDestDir(), "icon_q_item.png"));
td.ah("#item."+p.getLinkId()).img(Utilities.path(context.getLocalPrefix(), "icon_q_item.png"));
td.tx(" > ");
}
td.img(Utilities.path(context.getDestDir(), "icon_q_item.png"));
td.img(Utilities.path(context.getLocalPrefix(), "icon_q_item.png"));
td.tx(" Item ");
td.b().tx(qi.getLinkId());
@ -767,7 +775,7 @@ public class QuestionnaireRenderer extends TerminologyRenderer {
}
private void renderEnableWhen(XhtmlNode x, QuestionnaireItemEnableWhenComponent ew) {
x.ah("#"+ew.getQuestion()).tx(ew.getQuestion());
x.ah("#item."+ew.getQuestion()).tx(ew.getQuestion());
x.tx(" ");
x.tx(ew.getOperator().toCode());
x.tx(" ");

View File

@ -1147,8 +1147,12 @@ public class FHIRPathEngine {
case HasValue: return checkParamCount(lexer, location, exp, 0);
case Alias: return checkParamCount(lexer, location, exp, 1);
case AliasAs: return checkParamCount(lexer, location, exp, 1);
case fromBase64: return checkParamCount(lexer, location, exp, 0);
case toBase64: return checkParamCount(lexer, location, exp, 0);
case Encode: return checkParamCount(lexer, location, exp, 1);
case Decode: return checkParamCount(lexer, location, exp, 1);
case Escape: return checkParamCount(lexer, location, exp, 1);
case Trim: return checkParamCount(lexer, location, exp, 0);
case Split: return checkParamCount(lexer, location, exp, 1);
case Join: return checkParamCount(lexer, location, exp, 1);
case HtmlChecks: return checkParamCount(lexer, location, exp, 0);
case ToInteger: return checkParamCount(lexer, location, exp, 0);
case ToDecimal: return checkParamCount(lexer, location, exp, 0);
@ -2646,10 +2650,23 @@ public class FHIRPathEngine {
return anything(CollectionStatus.SINGLETON);
case AliasAs :
checkParamTypes(exp.getFunction().toCode(), paramTypes, new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String));
return focus;
case fromBase64:
return focus;
case Encode:
checkParamTypes(exp.getFunction().toCode(), paramTypes, new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String));
return new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String);
case toBase64:
case Decode:
checkParamTypes(exp.getFunction().toCode(), paramTypes, new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String));
return new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String);
case Escape:
checkParamTypes(exp.getFunction().toCode(), paramTypes, new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String));
return new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String);
case Trim:
return new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String);
case Split:
checkParamTypes(exp.getFunction().toCode(), paramTypes, new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String));
return new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String);
case Join:
checkParamTypes(exp.getFunction().toCode(), paramTypes, new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String));
return new TypeDetails(CollectionStatus.SINGLETON, TypeDetails.FP_String);
case ToInteger : {
checkContextPrimitive(focus, "toInteger", true);
@ -2825,8 +2842,12 @@ public class FHIRPathEngine {
case AllTrue: return funcAllTrue(context, focus, exp);
case HasValue : return funcHasValue(context, focus, exp);
case AliasAs : return funcAliasAs(context, focus, exp);
case fromBase64 : return funcFromBase64(context, focus, exp);
case toBase64 : return funcToBase64(context, focus, exp);
case Encode : return funcEncode(context, focus, exp);
case Decode : return funcDecode(context, focus, exp);
case Escape : return funcEscape(context, focus, exp);
case Trim : return funcTrim(context, focus, exp);
case Split : return funcSplit(context, focus, exp);
case Join : return funcJoin(context, focus, exp);
case Alias : return funcAlias(context, focus, exp);
case HtmlChecks : return funcHtmlChecks(context, focus, exp);
case ToInteger : return funcToInteger(context, focus, exp);
@ -2854,27 +2875,43 @@ public class FHIRPathEngine {
throw new Error("not Implemented yet");
}
}
private List<Base> funcEncode(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
return result;
}
private List<Base> funcToBase64(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
if (focus.size() == 1) {
String s = convertToString(focus.get(0));
result.add(new StringType(Base64.encodeBase64String(s.getBytes())));
}
return result;
private List<Base> funcDecode(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
return result;
}
private List<Base> funcFromBase64(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
if (focus.size() == 1) {
String s = convertToString(focus.get(0));
result.add(new StringType(new String(Base64.decodeBase64(s))));
}
return result;
private List<Base> funcEscape(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
return result;
}
private List<Base> funcTrim(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
return result;
}
private List<Base> funcSplit(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
return result;
}
private List<Base> funcJoin(ExecutionContext context, List<Base> focus, ExpressionNode exp) {
List<Base> result = new ArrayList<Base>();
return result;
}
private List<Base> funcAliasAs(ExecutionContext context, List<Base> focus, ExpressionNode exp) throws FHIRException {
List<Base> nl = execute(context, focus, exp.getParameters().get(0), true);
String name = nl.get(0).primitiveValue();

View File

@ -0,0 +1,65 @@
package org.hl7.fhir.r5.test;
import static org.junit.Assert.assertTrue;
import java.io.ByteArrayOutputStream;
import java.io.IOException;
import org.hl7.fhir.r5.context.SimpleWorkerContext;
import org.hl7.fhir.r5.elementmodel.Element;
import org.hl7.fhir.r5.elementmodel.Manager;
import org.hl7.fhir.r5.elementmodel.Manager.FhirFormat;
import org.hl7.fhir.r5.formats.IParser.OutputStyle;
import org.hl7.fhir.r5.model.StructureDefinition;
import org.hl7.fhir.r5.test.utils.TestingUtilities;
import org.hl7.fhir.r5.utils.FHIRPathEngine;
import org.hl7.fhir.utilities.cache.PackageCacheManager;
import org.hl7.fhir.utilities.cache.ToolsVersion;
import org.junit.jupiter.api.BeforeAll;
import org.junit.jupiter.api.Test;
public class XmlParserTests {
private static SimpleWorkerContext context;
private static FHIRPathEngine fp;
@BeforeAll
public static void setUp() throws Exception {
PackageCacheManager pcm = new PackageCacheManager(true, ToolsVersion.TOOLS_VERSION);
context = SimpleWorkerContext.fromPackage(pcm.loadPackage("hl7.fhir.r4.core", "4.0.1"));
fp = new FHIRPathEngine(context);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "any.xml"), "any.xml", null);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "ii.xml"), "ii.xml", null);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "cd.xml"), "cd.xml", null);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "ce.xml"), "ce.xml", null);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "ed.xml"), "ed.xml", null);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "st.xml"), "st.xml", null);
context.loadFromFile(TestingUtilities.loadTestResourceStream("validator", "cda", "cda.xml"), "cda.xml", null);
for (StructureDefinition sd : context.getStructures()) {
if (!sd.hasSnapshot()) {
System.out.println("generate snapshot for " + sd.getUrl());
context.generateSnapshot(sd, true);
}
}
}
@Test
/**
* Deserializes a simplified CDA example into the logical model and checks that
* xml deserialization works for the xsi:type
*
* @throws IOException
*/
public void testXsiDeserialiserXmlParser() throws IOException {
Element cda = Manager.parse(context, TestingUtilities.loadTestResourceStream("validator", "cda", "example-xsi.xml"),
FhirFormat.XML);
ByteArrayOutputStream baosXml = new ByteArrayOutputStream();
Manager.compose(context, cda, baosXml, FhirFormat.XML, OutputStyle.PRETTY, null);
String cdaSerialised = baosXml.toString();
assertTrue(cdaSerialised.indexOf("xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\"")>0);
assertTrue(cdaSerialised.indexOf("xsi:type=\"CD\"")>0);
}
}

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@ -920,4 +920,12 @@ public class HierarchicalTableGenerator extends TranslatingUtilities {
if (!check)
throw new FHIRException(message);
}
public void emptyRow(TableModel model, int cellCount) {
Row r = new Row();
model.rows.add(r);
for (int i = 0; i < cellCount; i++) {
r.getCells().add(new Cell());
}
}
}