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Refactoring EntrySummary

This commit is contained in:
markiantorno 2020-02-21 15:55:36 -05:00
parent 23677ca155
commit 8c2679a200
1 changed files with 4 additions and 165 deletions
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169
org.hl7.fhir.validation/src/main/java/org/hl7/fhir/r5/validation/instancevalidator/InstanceValidator.java
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@ -36,13 +36,11 @@ import java.util.Map;
import java.util.Set; import java.util.Set;
import java.util.UUID; import java.util.UUID;
import org.apache.commons.lang3.NotImplementedException;
import org.apache.commons.lang3.StringUtils; import org.apache.commons.lang3.StringUtils;
import org.hl7.fhir.r5.model.Reference; import org.hl7.fhir.r5.model.Reference;
import org.hl7.fhir.convertors.*; import org.hl7.fhir.convertors.*;
import org.hl7.fhir.exceptions.DefinitionException; import org.hl7.fhir.exceptions.DefinitionException;
import org.hl7.fhir.exceptions.FHIRException; import org.hl7.fhir.exceptions.FHIRException;
import org.hl7.fhir.exceptions.PathEngineException;
import org.hl7.fhir.exceptions.TerminologyServiceException; import org.hl7.fhir.exceptions.TerminologyServiceException;
import org.hl7.fhir.r5.conformance.ProfileUtilities; import org.hl7.fhir.r5.conformance.ProfileUtilities;
import org.hl7.fhir.r5.context.IWorkerContext; import org.hl7.fhir.r5.context.IWorkerContext;
@ -116,7 +114,6 @@ import org.hl7.fhir.r5.model.StructureDefinition.TypeDerivationRule;
import org.hl7.fhir.r5.model.TimeType; import org.hl7.fhir.r5.model.TimeType;
import org.hl7.fhir.r5.model.Timing; import org.hl7.fhir.r5.model.Timing;
import org.hl7.fhir.r5.model.DataType; import org.hl7.fhir.r5.model.DataType;
import org.hl7.fhir.r5.model.TypeDetails;
import org.hl7.fhir.r5.model.UriType; import org.hl7.fhir.r5.model.UriType;
import org.hl7.fhir.r5.model.ValueSet; import org.hl7.fhir.r5.model.ValueSet;
import org.hl7.fhir.r5.model.ValueSet.ValueSetExpansionContainsComponent; import org.hl7.fhir.r5.model.ValueSet.ValueSetExpansionContainsComponent;
@ -168,165 +165,7 @@ import ca.uhn.fhir.util.ObjectUtil;
public class InstanceValidator extends BaseValidator implements IResourceValidator { public class InstanceValidator extends BaseValidator implements IResourceValidator {
/**
private class ValidatorHostServices implements IEvaluationContext {
// private Stack<Map<String, List<>>>
@Override
public Base resolveConstant(Object appContext, String name, boolean beforeContext) throws PathEngineException {
ValidatorHostContext c = (ValidatorHostContext) appContext;
if (externalHostServices != null)
return externalHostServices.resolveConstant(c.getAppContext(), name, beforeContext);
else
return null;
}
@Override
public TypeDetails resolveConstantType(Object appContext, String name) throws PathEngineException {
ValidatorHostContext c = (ValidatorHostContext) appContext;
if (externalHostServices != null)
return externalHostServices.resolveConstantType(c.getAppContext(), name);
else
return null;
}
@Override
public boolean log(String argument, List<Base> focus) {
if (externalHostServices != null)
return externalHostServices.log(argument, focus);
else
return false;
}
@Override
public FunctionDetails resolveFunction(String functionName) {
throw new Error("Not done yet (ValidatorHostServices.resolveFunction): "+functionName);
}
@Override
public TypeDetails checkFunction(Object appContext, String functionName, List<TypeDetails> parameters) throws PathEngineException {
throw new Error("Not done yet (ValidatorHostServices.checkFunction)");
}
@Override
public List<Base> executeFunction(Object appContext, String functionName, List<List<Base>> parameters) {
throw new Error("Not done yet (ValidatorHostServices.executeFunction)");
}
@Override
public Base resolveReference(Object appContext, String url, Base refContext) throws FHIRException {
ValidatorHostContext c = (ValidatorHostContext) appContext;
if (refContext != null && refContext.hasUserData("validator.bundle.resolution")) {
return (Base) refContext.getUserData("validator.bundle.resolution");
}
if (c.getAppContext() instanceof Element) {
Element bnd = (Element) c.getAppContext();
Base res = resolveInBundle(url, bnd);
if (res != null)
return res;
}
Base res = resolveInBundle(url, c.getResource());
if (res != null)
return res;
res = resolveInBundle(url, c.getContainer());
if (res != null)
return res;
if (externalHostServices != null)
return externalHostServices.resolveReference(c.getAppContext(), url, refContext);
else if (fetcher != null)
try {
return fetcher.fetch(c.getAppContext(), url);
} catch (IOException e) {
throw new FHIRException(e);
}
else
throw new Error("Not done yet - resolve "+url+" locally (2)");
}
public Base resolveInBundle(String url, Element bnd) {
if (bnd == null)
return null;
if (bnd.fhirType().equals("Bundle")) {
for (Element be : bnd.getChildrenByName("entry")) {
Element res = be.getNamedChild("resource");
if (res != null) {
String fullUrl = be.getChildValue("fullUrl");
String rt = res.fhirType();
String id = res.getChildValue("id");
if (url.equals(fullUrl))
return res;
if (url.equals(rt+"/"+id))
return res;
}
}
}
return null;
}
@Override
public boolean conformsToProfile(Object appContext, Base item, String url) throws FHIRException {
ValidatorHostContext ctxt = (ValidatorHostContext) appContext;
StructureDefinition sd = context.fetchResource(StructureDefinition.class, url);
if (sd == null) {
throw new FHIRException("Unable to resolve "+url);
}
InstanceValidator self = InstanceValidator.this;
List<ValidationMessage> valerrors = new ArrayList<ValidationMessage>();
if (item instanceof Resource) {
try {
Element e = new ObjectConverter(context).convert((Resource) item);
self.validateResource(new ValidatorHostContext(ctxt.getAppContext(), e), valerrors, e, e, sd, IdStatus.OPTIONAL,new NodeStack(e));
} catch (IOException e1) {
throw new FHIRException(e1);
}
} else if (item instanceof Element) {
Element e = (Element) item;
if (e.isResource()) {
self.validateResource(new ValidatorHostContext(ctxt.getAppContext(), e), valerrors, e, e, sd, IdStatus.OPTIONAL,new NodeStack(e));
} else {
throw new FHIRException("Not supported yet");
}
} else
throw new NotImplementedException("Not done yet (ValidatorHostServices.conformsToProfile), when item is not an element");
boolean ok = true;
List<ValidationMessage> record = new ArrayList<>();
for (ValidationMessage v : valerrors) {
ok = ok && !v.getLevel().isError();
if (v.getLevel().isError() || v.isSlicingHint()) {
record.add(v);
}
}
if (!ok && !record.isEmpty()) {
ctxt.sliceNotes(url, record);
}
return ok;
}
@Override
public ValueSet resolveValueSet(Object appContext, String url) {
ValidatorHostContext c = (ValidatorHostContext) appContext;
if (c.getProfile() != null && url.startsWith("#")) {
for (Resource r : c.getProfile().getContained()) {
if (r.getId().equals(url.substring(1))) {
if (r instanceof ValueSet)
return (ValueSet) r;
else
throw new FHIRException("Reference "+url+" refers to a "+r.fhirType()+" not a ValueSet");
}
}
return null;
}
return context.fetchResource(ValueSet.class, url);
}
}
/**
* The validator keeps one of these classes for each resource it validates (e.g. when chasing references) * The validator keeps one of these classes for each resource it validates (e.g. when chasing references)
* *
* It keeps track of the state of resource validation - a given resrouce may be validated agaisnt multiple * It keeps track of the state of resource validation - a given resrouce may be validated agaisnt multiple
@ -415,7 +254,7 @@ public class InstanceValidator extends BaseValidator implements IResourceValidat
this.context = theContext; this.context = theContext;
this.externalHostServices = hostServices; this.externalHostServices = hostServices;
fpe = new FHIRPathEngine(context); fpe = new FHIRPathEngine(context);
validatorServices = new ValidatorHostServices(); validatorServices = new ValidatorHostServices(this);
fpe.setHostServices(validatorServices); fpe.setHostServices(validatorServices);
if (theContext.getVersion().startsWith("3.0") || theContext.getVersion().startsWith("1.0")) if (theContext.getVersion().startsWith("3.0") || theContext.getVersion().startsWith("1.0"))
fpe.setLegacyMode(true); fpe.setLegacyMode(true);
@ -5282,7 +5121,7 @@ private boolean isAnswerRequirementFulfilled(QuestionnaireItemComponent qItem, L
/* /*
* The actual base entry point for internal use (re-entrant) * The actual base entry point for internal use (re-entrant)
*/ */
private void validateResource(ValidatorHostContext hostContext, List<ValidationMessage> errors, Element resource, Element element, StructureDefinition defn, IdStatus idstatus, NodeStack stack) throws FHIRException { public void validateResource(ValidatorHostContext hostContext, List<ValidationMessage> errors, Element resource, Element element, StructureDefinition defn, IdStatus idstatus, NodeStack stack) throws FHIRException {
assert stack != null; assert stack != null;
assert resource != null; assert resource != null;
boolean ok = true; boolean ok = true;
@ -5385,7 +5224,7 @@ private boolean isAnswerRequirementFulfilled(QuestionnaireItemComponent qItem, L
return Calendar.getInstance().get(Calendar.YEAR); return Calendar.getInstance().get(Calendar.YEAR);
} }
public class NodeStack { public static class NodeStack {
private ElementDefinition definition; private ElementDefinition definition;
private Element element; private Element element;
private ElementDefinition extension; private ElementDefinition extension;