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fix up parsing of logical models

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This commit is contained in:
Grahame Grieve 2023-09-25 13:34:43 +10:00
parent 798a93bbec
commit 957dc3f733
3 changed files with 54 additions and 20 deletions
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70
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/elementmodel/ParserBase.java
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@ -142,26 +142,60 @@ public abstract class ParserBase {
protected StructureDefinition getDefinition(List<ValidationMessage> errors, int line, int col, String ns, String name) throws FHIRFormatError { protected StructureDefinition getDefinition(List<ValidationMessage> errors, int line, int col, String ns, String name) throws FHIRFormatError {
if (ns == null) { if (logical != null) {
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.THIS__CANNOT_BE_PARSED_AS_A_FHIR_OBJECT_NO_NAMESPACE, name), IssueSeverity.FATAL); String expectedName = ToolingExtensions.readStringExtension(logical, "http://hl7.org/fhir/StructureDefinition/elementdefinition-name");
return null; if (expectedName == null) {
} expectedName = logical.getType();
if (name == null) {
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.THIS_CANNOT_BE_PARSED_AS_A_FHIR_OBJECT_NO_NAME), IssueSeverity.FATAL);
return null;
}
for (StructureDefinition sd : context.fetchResourcesByType(StructureDefinition.class)) {
if (sd.getDerivation() == TypeDerivationRule.SPECIALIZATION && !sd.getUrl().startsWith("http://hl7.org/fhir/StructureDefinition/de-")) {
String type = urlTail(sd.getType());
if(name.equals(type) && (ns == null || ns.equals(FormatUtilities.FHIR_NS)) && !ToolingExtensions.hasExtension(sd, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace"))
return sd;
String sns = ToolingExtensions.readStringExtension(sd, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace");
if ((name.equals(type) || name.equals(sd.getName())) && ns != null && ns.equals(sns))
return sd;
} }
String expectedNamespace = ToolingExtensions.readStringExtension(logical, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace");
if (matchesNamespace(expectedNamespace, ns) && matchesName(expectedName, name)) {
return logical;
} else {
if (expectedNamespace == null && ns == null) {
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.LOGICAL_MODEL_NAME_MISMATCH, name, expectedName), IssueSeverity.FATAL);
} else {
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.LOGICAL_MODEL_QNAME_MISMATCH, qn(ns, name), qn(expectedNamespace, expectedName)), IssueSeverity.FATAL);
}
return null;
}
} else {
if (ns == null) {
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.THIS__CANNOT_BE_PARSED_AS_A_FHIR_OBJECT_NO_NAMESPACE, name), IssueSeverity.FATAL);
return null;
}
if (name == null) {
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.THIS_CANNOT_BE_PARSED_AS_A_FHIR_OBJECT_NO_NAME), IssueSeverity.FATAL);
return null;
}
for (StructureDefinition sd : context.fetchResourcesByType(StructureDefinition.class)) {
if (sd.getDerivation() == TypeDerivationRule.SPECIALIZATION && !sd.getUrl().startsWith("http://hl7.org/fhir/StructureDefinition/de-")) {
String type = urlTail(sd.getType());
if(name.equals(type) && (ns == null || ns.equals(FormatUtilities.FHIR_NS)) && !ToolingExtensions.hasExtension(sd, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace"))
return sd;
String sns = ToolingExtensions.readStringExtension(sd, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace");
if ((name.equals(type) || name.equals(sd.getName())) && ns != null && ns.equals(sns))
return sd;
}
}
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.THIS_DOES_NOT_APPEAR_TO_BE_A_FHIR_RESOURCE_UNKNOWN_NAMESPACENAME_, (ns == null ? "(none)" : ns), name), IssueSeverity.FATAL);
return null;
} }
logError(errors, ValidationMessage.NO_RULE_DATE, line, col, name, IssueType.STRUCTURE, context.formatMessage(I18nConstants.THIS_DOES_NOT_APPEAR_TO_BE_A_FHIR_RESOURCE_UNKNOWN_NAMESPACENAME_, ns, name), IssueSeverity.FATAL); }
return null;
private Object qn(String ns, String name) {
return ns == null ? name : ns+"::"+name;
}
private boolean matchesNamespace(String expectedNamespace, String ns) {
if (expectedNamespace == null) {
return ns == null || "noNamespace".equals(ns);
} else {
return expectedNamespace.equals(ns);
}
}
private boolean matchesName(String expectedName, String name) {
return expectedName != null && expectedName.equals(name);
} }
private String urlTail(String type) { private String urlTail(String type) {

2
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/elementmodel/XmlParser.java
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@ -541,7 +541,7 @@ public class XmlParser extends ParserBase {
} }
private String convertForDateFormatToExternal(String fmt, String av) throws FHIRException { private String convertForDateFormatToExternal(String fmt, String av) throws FHIRException {
if ("v3".equals(fmt)) { if ("v3".equals(fmt) || "YYYYMMDDHHMMSS.UUUU[+|-ZZzz]".equals(fmt)) {
DateTimeType d = new DateTimeType(av); DateTimeType d = new DateTimeType(av);
return d.getAsV3(); return d.getAsV3();
} else } else

2
org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/formats/JsonParser.java
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@ -35388,7 +35388,7 @@ public class JsonParser extends JsonParserBase {
return parseVisionPrescription(json); return parseVisionPrescription(json);
} else { } else {
throw new FHIRFormatError("Unknown.Unrecognised resource type '"+t+"' (in property 'resourceType')"); throw new FHIRFormatError("Unknown/Unrecognised resource type '"+t+"' (in property 'resourceType')");
} }
} }