improve Patient rendering
This commit is contained in:
Grahame Grieve
parent
2e35e85dec
commit
a6d3d56223
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@ -679,6 +679,13 @@ public class DataRenderer extends Renderer {
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renderSampledData(x, (SampledData) type);
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} else if (type instanceof Reference) {
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renderReference(x, (Reference) type);
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} else if (type instanceof CodeableReference) {
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CodeableReference cr = (CodeableReference) type;
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if (cr.hasConcept()) {
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renderCodeableConcept(x, cr.getConcept());
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} else {
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renderReference(x, cr.getReference());
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}
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} else if (type instanceof MarkdownType) {
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addMarkdown(x, ((MarkdownType) type).asStringValue());
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} else if (type.isPrimitive()) {
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@ -1,28 +1,76 @@
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package org.hl7.fhir.r5.renderers;
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import java.io.File;
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import java.io.IOException;
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import java.io.UnsupportedEncodingException;
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import java.util.ArrayList;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.UUID;
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import org.apache.poi.hssf.record.chart.DatRecord;
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import org.hl7.fhir.exceptions.DefinitionException;
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import org.hl7.fhir.exceptions.FHIRException;
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import org.hl7.fhir.exceptions.FHIRFormatError;
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import org.hl7.fhir.r5.model.Address;
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import org.hl7.fhir.r5.model.Attachment;
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import org.hl7.fhir.r5.model.Base;
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import org.hl7.fhir.r5.model.CodeableConcept;
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import org.hl7.fhir.r5.model.ContactPoint;
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import org.hl7.fhir.r5.model.DataType;
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import org.hl7.fhir.r5.model.DateTimeType;
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import org.hl7.fhir.r5.model.DateType;
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import org.hl7.fhir.r5.model.DomainResource;
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import org.hl7.fhir.r5.model.Extension;
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import org.hl7.fhir.r5.model.HumanName;
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import org.hl7.fhir.r5.model.HumanName.NameUse;
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import org.hl7.fhir.r5.model.Identifier;
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import org.hl7.fhir.r5.model.Identifier.IdentifierUse;
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import org.hl7.fhir.r5.model.Patient;
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import org.hl7.fhir.r5.model.Period;
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import org.hl7.fhir.r5.model.Reference;
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import org.hl7.fhir.r5.model.Resource;
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import org.hl7.fhir.r5.model.StructureDefinition;
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import org.hl7.fhir.r5.renderers.PatientRenderer.NamedReferance;
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import org.hl7.fhir.r5.renderers.utils.RenderingContext;
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import org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper;
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import org.hl7.fhir.r5.renderers.utils.BaseWrappers.PropertyWrapper;
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import org.hl7.fhir.r5.renderers.utils.BaseWrappers.ResourceWrapper;
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import org.hl7.fhir.utilities.TextFile;
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import org.hl7.fhir.utilities.Utilities;
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import org.hl7.fhir.utilities.xhtml.XhtmlNode;
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public class PatientRenderer extends ResourceRenderer {
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public class NamedReferance {
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private String name;
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private Reference reference;
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private BaseWrapper wrapper;
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public NamedReferance(String name, Reference ref, BaseWrapper refw) {
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this.name = name;
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this.reference = ref;
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this.wrapper = refw;
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}
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public String getName() {
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return name;
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}
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public Reference getReference() {
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return reference;
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}
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public BaseWrapper getWrapper() {
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return wrapper;
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}
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}
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private static final int MAX_IMAGE_LENGTH = 2*1024*1024;
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public PatientRenderer(RenderingContext context) {
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super(context);
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}
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@ -224,7 +272,542 @@ public class PatientRenderer extends ResourceRenderer {
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@Override
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public boolean render(XhtmlNode x, ResourceWrapper r) throws FHIRFormatError, DefinitionException, IOException {
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describe(x.para(), r);
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// banner
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describe(makeBanner(x.para()), r);
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x.hr();
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XhtmlNode tbl;
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if (hasRenderablePhoto(r)) {
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tbl = x.table("none");
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XhtmlNode tr = tbl.tr();
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tbl = tr.td().table("grid");
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renderPhoto(tr.td(), r);
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} else {
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tbl = x.table("grid");
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}
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// the table has 4 columns
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addStatus(tbl, r);
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addIdentifiers(tbl, r);
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addNames(tbl, r);
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addComms(tbl, r);
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addLangs(tbl, r);
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addNOKs(tbl, r);
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addLinks(tbl, r);
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addExtensions(tbl, r);
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if (tbl.isEmpty()) {
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x.remove(tbl);
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}
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return false;
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}
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private void addExtensions(XhtmlNode tbl, ResourceWrapper r) throws UnsupportedEncodingException, FHIRException, IOException {
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Map<String, List<Extension>> extensions = new HashMap<>();
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PropertyWrapper pw = getProperty(r, "extension");
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for (BaseWrapper t : pw.getValues()) {
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Extension ext = (Extension) t.getBase();
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if (!extensions.containsKey(ext.getUrl())) {
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extensions.put(ext.getUrl(), new ArrayList<>());
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}
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extensions.get(ext.getUrl()).add(ext);
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}
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for (String url : extensions.keySet()) {
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StructureDefinition sd = context.getWorker().fetchResource(StructureDefinition.class, url);
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if (sd != null) {
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List<Extension> list = extensions.get(url);
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boolean anyComplex = false;
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for (Extension ext : list) {
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anyComplex = anyComplex || ext.hasExtension();
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}
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if (!anyComplex) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, sd.getTitle()+":", sd.getDescription(), sd.getUserString("path"));
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XhtmlNode td = tr.td();
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td.colspan("3");
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if (list.size() == 1) {
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XhtmlNode ul = td.ul();
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for (Extension s : list) {
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XhtmlNode li = ul.li();
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render(r, li, s.getValue());
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}
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} else {
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render(r, td, list.get(0).getValue());
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}
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} else {
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for (Extension ext : list) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, sd.getTitle()+":", sd.getDescription());
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XhtmlNode td = tr.td();
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td.colspan("3");
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if (ext.hasExtension()) {
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XhtmlNode ul = td.ul();
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for (Extension s : ext.getExtension()) {
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XhtmlNode li = ul.li();
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li.tx(s.getUrl()+": ");
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if (s.hasExtension()) {
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boolean first = true;
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for (Extension t : s.getExtension()) {
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if (first) first = false; else li.tx("; ");
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li.tx(t.getUrl()+"=");
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render(r, li, t.getValue());
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}
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} else {
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render(r, li, s.getValue());
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}
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}
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} else {
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render(r, td, ext.getValue());
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}
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}
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}
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}
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}
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}
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private void addIdentifiers(XhtmlNode tbl, ResourceWrapper r) throws FHIRFormatError, DefinitionException, IOException {
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List<Identifier> ids = new ArrayList<>();
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PropertyWrapper pw = getProperty(r, "identifier");
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for (BaseWrapper t : pw.getValues()) {
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ids.add((Identifier) t.getBase());
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}
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Identifier id = null;
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for (Identifier i : ids) {
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id = chooseId(id, i);
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}
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if (id != null) {
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ids.remove(id);
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};
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if (ids.size() == 1) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Other Id:", "Other Ids (see the one above)");
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XhtmlNode td = tr.td();
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td.colspan("3");
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render(r, td, ids.get(0));
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} else if (ids.size() > 1) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Other Ids:", "Other Ids (see the one above)");
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XhtmlNode td = tr.td();
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td.colspan("3");
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XhtmlNode ul = td.ul();
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for (Identifier i : ids) {
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render(r, ul.li(), i);
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}
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}
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}
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private void addLangs(XhtmlNode tbl, ResourceWrapper r) throws FHIRFormatError, DefinitionException, IOException {
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List<CodeableConcept> langs = new ArrayList<>();
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PropertyWrapper pw = getProperty(r, "communication");
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CodeableConcept prefLang = null;
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for (BaseWrapper t : pw.getValues()) {
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PropertyWrapper l = getProperty(t, "language");
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if (l != null && l.hasValues()) {
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CodeableConcept lang = (CodeableConcept) l.getValues().get(0).getBase();
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langs.add(lang);
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l = getProperty(t, "preferred");
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if (l != null && l.hasValues() && "true".equals(l.getValues().get(0).getBase().primitiveValue())) {
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prefLang = lang;
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}
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}
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}
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if (langs.size() == 1) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Language:", "Languages spoken");
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XhtmlNode td = tr.td();
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td.colspan("3");
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render(r, td, langs.get(0));
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if (prefLang != null) {
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td.tx(" (preferred)");
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}
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} else if (langs.size() > 1) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Languages:", "Languages spoken");
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XhtmlNode td = tr.td();
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td.colspan("3");
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XhtmlNode ul = td.ul();
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for (CodeableConcept i : langs) {
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XhtmlNode li = ul.li();
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render(r, li, i);
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if (i == prefLang) {
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li.tx(" (preferred)");
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}
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}
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}
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}
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private void addLinks(XhtmlNode tbl, ResourceWrapper r) throws UnsupportedEncodingException, FHIRException, IOException {
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List<NamedReferance> refs = new ArrayList<>();
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PropertyWrapper pw = getProperty(r, "generalPractitioner");
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if (pw != null) {
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for (BaseWrapper t : pw.getValues()) {
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refs.add(new NamedReferance("General Practitioner", (Reference) t.getBase(), t));
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}
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}
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pw = getProperty(r, "managingOrganization");
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if (pw != null) {
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for (BaseWrapper t : pw.getValues()) {
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refs.add(new NamedReferance("Managing Organization", (Reference) t.getBase(), t));
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}
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}
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pw = getProperty(r, "link");
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for (BaseWrapper t : pw.getValues()) {
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PropertyWrapper l = getProperty(t, "other");
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Reference ref = null;
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BaseWrapper refw = null;
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for (BaseWrapper v : l.getValues()) {
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ref = (Reference) v.getBase();
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refw = v;
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}
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String type = null;
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l = getProperty(t, "type");
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for (BaseWrapper v : l.getValues()) {
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type = v.getBase().primitiveValue();
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}
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if (type != null && ref != null) {
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refs.add(new NamedReferance(describeLinkedRecord(type), ref, refw));
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}
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}
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if (refs.size() > 0) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Links:", "Patient Links");
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XhtmlNode td = tr.td();
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td.colspan("3");
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XhtmlNode ul = td.ul();
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for (NamedReferance ref : refs) {
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XhtmlNode li = ul.li();
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li.tx(ref.getName());
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li.tx(": ");
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renderReference(r, li, ref.getReference());
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}
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}
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}
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private String describeLinkedRecord(String type) {
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switch (type) {
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case "replaced-by" : return "This record replaced by";
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case "replaces": return "This record replaces";
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case "refer": return "Please refer to";
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case "seealso": return "Also see";
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}
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return "Unknown";
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}
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private void addNOKs(XhtmlNode tbl, ResourceWrapper r) throws FHIRFormatError, DefinitionException, IOException {
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PropertyWrapper pw = getProperty(r, "contact");
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for (BaseWrapper t : pw.getValues()) {
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addNOK(tbl,r, t);
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}
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}
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private void addNOK(XhtmlNode tbl, ResourceWrapper r, BaseWrapper bw) throws FHIRFormatError, DefinitionException, IOException {
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List<CodeableConcept> rels = new ArrayList<>();
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HumanName name = null;
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Address add = null;
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String gender = null;
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Period period = null;
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Reference organization = null;
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List<ContactPoint> tels = new ArrayList<>();
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PropertyWrapper pw = getProperty(bw, "relationship");
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for (BaseWrapper t : pw.getValues()) {
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CodeableConcept v = (CodeableConcept) t.getBase();
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rels.add(v);
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}
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pw = getProperty(bw, "name");
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if (pw.hasValues()) {
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name = (HumanName) pw.getValues().get(0).getBase();
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}
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pw = getProperty(bw, "telecom");
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for (BaseWrapper t : pw.getValues()) {
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ContactPoint v = (ContactPoint) t.getBase();
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tels.add(v);
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}
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pw = getProperty(bw, "address");
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if (pw.hasValues()) {
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add = (Address) pw.getValues().get(0).getBase();
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}
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pw = getProperty(bw, "gender");
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if (pw.hasValues()) {
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gender = pw.getValues().get(0).getBase().primitiveValue();
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}
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pw = getProperty(bw, "organization");
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if (pw.hasValues()) {
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organization = (Reference) pw.getValues().get(0).getBase();
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}
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pw = getProperty(bw, "period");
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if (pw.hasValues()) {
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period = (Period) pw.getValues().get(0).getBase();
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}
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if (rels.size() < 2 && name == null && add == null && gender == null && period == null && organization == null && tels.size() == 0) {
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return; // nothing to render
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}
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XhtmlNode tr = tbl.tr();
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if (rels.size() == 1) {
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nameCell(tr, (rels.get(0).getCodingFirstRep().hasDisplay() ? rels.get(0).getCodingFirstRep().getDisplay() : display(rels.get(0)))+":", "Nominated Contact: "+display(rels.get(0)));
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} else {
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nameCell(tr, "Contact", "Patient contact");
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}
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XhtmlNode td = tr.td();
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td.colspan("3");
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XhtmlNode ul = td.ul();
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XhtmlNode li;
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if (name != null) {
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li = ul.li();
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render(r, li, name);
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if (gender != null) {
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li.tx(" ("+gender+")");
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}
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} else if (gender != null) {
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li = ul.li();
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li.tx("Gender: "+gender);
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}
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if (rels.size() > 1) {
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li = ul.li();
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li.tx("Relationships: ");
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boolean first = true;
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for (CodeableConcept rel : rels) {
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if (first) first = false; else li.tx(", ");
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render(r, li, rel);
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}
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}
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if (add != null) {
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render(r, ul.li(), add);
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}
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for (ContactPoint cp : tels) {
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render(r, ul.li(), cp);
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}
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if (organization != null) {
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li = ul.li();
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li.tx("Organization: ");
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render(r, li, organization);
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}
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if (period != null) {
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li = ul.li();
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li.tx("Valid Period: ");
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render(r, li, period);
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}
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}
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private void addNames(XhtmlNode tbl, ResourceWrapper r) throws FHIRFormatError, DefinitionException, IOException {
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List<HumanName> names = new ArrayList<>();
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PropertyWrapper pw = getProperty(r, "name");
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for (BaseWrapper t : pw.getValues()) {
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names.add((HumanName) t.getBase());
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}
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HumanName name = null;
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for (HumanName n : names) {
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name = chooseName(name, n);
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}
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if (name != null) {
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names.remove(name);
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};
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if (names.size() == 1) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Alt. Name:", "Alternate names (see the one above)");
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XhtmlNode td = tr.td();
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td.colspan("3");
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render(r, td, names.get(0));
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} else if (names.size() > 1) {
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XhtmlNode tr = tbl.tr();
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nameCell(tr, "Alt Names:", "Alternate names (see the one above)");
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XhtmlNode td = tr.td();
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td.colspan("3");
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XhtmlNode ul = td.ul();
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for (HumanName n : names) {
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render(r, ul.li(), n);
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}
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}
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}
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private void addComms(XhtmlNode tbl, ResourceWrapper r) throws FHIRFormatError, DefinitionException, IOException {
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List<ContactPoint> tels = new ArrayList<>();
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PropertyWrapper pw = getProperty(r, "telecom");
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for (BaseWrapper t : pw.getValues()) {
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tels.add((ContactPoint) t.getBase());
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}
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List<Address> adds = new ArrayList<>();
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pw = getProperty(r, "address");
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for (BaseWrapper t : pw.getValues()) {
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adds.add((Address) t.getBase());
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}
|
||||
if (tels.size() + adds.size() == 1) {
|
||||
XhtmlNode tr = tbl.tr();
|
||||
nameCell(tr, "Contact Detail:", "Ways to contact the Patient");
|
||||
XhtmlNode td = tr.td();
|
||||
td.colspan("3");
|
||||
if (adds.isEmpty()) {
|
||||
render(r, td, tels.get(0));
|
||||
} else {
|
||||
render(r, td, adds.get(0));
|
||||
}
|
||||
} else if (tels.size() + adds.size() > 1) {
|
||||
XhtmlNode tr = tbl.tr();
|
||||
nameCell(tr, "Contact Details:", "Ways to contact the Patient");
|
||||
XhtmlNode td = tr.td();
|
||||
td.colspan("3");
|
||||
XhtmlNode ul = td.ul();
|
||||
for (ContactPoint n : tels) {
|
||||
render(r, ul.li(), n);
|
||||
}
|
||||
for (Address n : adds) {
|
||||
render(r, ul.li(), n);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
private void addStatus(XhtmlNode tbl, ResourceWrapper r) throws FHIRFormatError, DefinitionException, UnsupportedEncodingException, FHIRException, IOException {
|
||||
// TODO Auto-generated method stub
|
||||
int count = 0;
|
||||
if (r.has("active")) {
|
||||
count++;
|
||||
}
|
||||
if (r.has("deceased")) {
|
||||
count++;
|
||||
}
|
||||
if (r.has("maritalStatus")) {
|
||||
count++;
|
||||
}
|
||||
if (r.has("multipleBirth")) {
|
||||
count++;
|
||||
}
|
||||
if (count > 0) {
|
||||
XhtmlNode tr = tbl.tr();
|
||||
int pos = 0;
|
||||
if (r.has("active")) {
|
||||
PropertyWrapper a = r.getChildByName("active");
|
||||
if (a.hasValues()) {
|
||||
pos++;
|
||||
nameCell(tr, "Active:", "Record is active");
|
||||
XhtmlNode td = tr.td();
|
||||
if (pos == count) {
|
||||
td.colspan("3");
|
||||
}
|
||||
render(r, td, (DataType) a.value().getBase());
|
||||
}
|
||||
}
|
||||
if (r.has("deceased[x]")) {
|
||||
PropertyWrapper a = r.getChildByName("deceased[x]");
|
||||
if (a.hasValues()) {
|
||||
pos++;
|
||||
nameCell(tr, "Deceased:", "Known status of Patient");
|
||||
XhtmlNode td = tr.td();
|
||||
if (pos == count) {
|
||||
td.colspan("3");
|
||||
}
|
||||
render(r, td, (DataType) a.value().getBase());
|
||||
}
|
||||
}
|
||||
if (r.has("maritalStatus")) {
|
||||
PropertyWrapper a = r.getChildByName("maritalStatus");
|
||||
if (a.hasValues()) {
|
||||
pos++;
|
||||
if (pos == 3) {
|
||||
tr = tbl.tr();
|
||||
}
|
||||
nameCell(tr, "Marital Status:", "Known Marital status of Patient");
|
||||
XhtmlNode td = tr.td();
|
||||
if (pos == count) {
|
||||
td.colspan("3");
|
||||
}
|
||||
render(r, td, (DataType) a.value().getBase());
|
||||
}
|
||||
}
|
||||
if (r.has("multipleBirth[x]")) {
|
||||
PropertyWrapper a = r.getChildByName("multipleBirth[x]");
|
||||
if (a.hasValues()) {
|
||||
pos++;
|
||||
if (pos == 3) {
|
||||
tr = tbl.tr();
|
||||
}
|
||||
nameCell(tr, "Multiple Birth:", "Known multipleBirth status of Patient");
|
||||
XhtmlNode td = tr.td();
|
||||
if (pos == count) {
|
||||
td.colspan("3");
|
||||
}
|
||||
render(r, td, (DataType) a.value().getBase());
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
private void nameCell(XhtmlNode tr, String text, String title) {
|
||||
XhtmlNode td = tr.td();
|
||||
td.setAttribute("title", title);
|
||||
td.tx(text);
|
||||
td.style("background-color: #f3f5da");
|
||||
}
|
||||
|
||||
private void nameCell(XhtmlNode tr, String text, String title, String link) {
|
||||
XhtmlNode td = tr.td();
|
||||
td.setAttribute("title", title);
|
||||
if (link != null) {
|
||||
td.ah(link).tx(text);
|
||||
} else {
|
||||
td.tx(text);
|
||||
}
|
||||
td.style("background-color: #f3f5da");
|
||||
}
|
||||
|
||||
private void renderPhoto(XhtmlNode td, ResourceWrapper r) throws UnsupportedEncodingException, FHIRException, IOException {
|
||||
if (r.has("photo")) {
|
||||
PropertyWrapper a = r.getChildByName("photo");
|
||||
for (BaseWrapper v : a.getValues()) {
|
||||
Attachment att = (Attachment) v.getBase();
|
||||
if (att.getContentType().startsWith("image/") &&
|
||||
att.getData() != null && (!context.isInlineGraphics() || (att.getData().length > 0 && att.getData().length < MAX_IMAGE_LENGTH))) {
|
||||
String ext = extensionForType(att.getContentType());
|
||||
if (context.isInlineGraphics() || Utilities.noString(context.getDestDir()) || ext == null) {
|
||||
td.img("data:"+att.getContentType()+";base64,"+att.getDataElement().asStringValue());
|
||||
} else {
|
||||
String n = UUID.randomUUID().toString().toLowerCase()+ext;
|
||||
TextFile.bytesToFile(att.getData(), new File(Utilities.path(context.getDestDir(), n)));
|
||||
td.img(n);
|
||||
}
|
||||
return;
|
||||
}
|
||||
}
|
||||
}
|
||||
return;
|
||||
}
|
||||
|
||||
private String extensionForType(String contentType) {
|
||||
if (contentType.equals("image/gif")) {
|
||||
return ".gif";
|
||||
}
|
||||
if (contentType.equals("image/png")) {
|
||||
return ".png";
|
||||
}
|
||||
if (contentType.equals("image/jpeg")) {
|
||||
return ".jpg";
|
||||
}
|
||||
return null;
|
||||
}
|
||||
|
||||
private boolean hasRenderablePhoto(ResourceWrapper r) throws UnsupportedEncodingException, FHIRException, IOException {
|
||||
if (r.has("photo")) {
|
||||
PropertyWrapper a = r.getChildByName("photo");
|
||||
for (BaseWrapper v : a.getValues()) {
|
||||
Attachment att = (Attachment) v.getBase();
|
||||
if (att.getContentType().startsWith("image/") &&
|
||||
att.getData() != null && (!context.isInlineGraphics() || (att.getData().length > 0 && att.getData().length < MAX_IMAGE_LENGTH))) {
|
||||
return true;
|
||||
}
|
||||
}
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
private XhtmlNode makeBanner(XhtmlNode para) {
|
||||
para.style("border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;");
|
||||
return para;
|
||||
}
|
||||
}
|
||||
|
|
@ -11,7 +11,9 @@ import org.hl7.fhir.r5.elementmodel.Element;
|
|||
import org.hl7.fhir.r5.model.Base;
|
||||
import org.hl7.fhir.r5.model.Bundle.BundleEntryComponent;
|
||||
import org.hl7.fhir.r5.model.CodeSystem.ConceptDefinitionComponent;
|
||||
import org.hl7.fhir.r5.model.CodeableReference;
|
||||
import org.hl7.fhir.r5.model.Coding;
|
||||
import org.hl7.fhir.r5.model.DataType;
|
||||
import org.hl7.fhir.r5.model.Enumerations.PublicationStatus;
|
||||
import org.hl7.fhir.r5.model.CanonicalResource;
|
||||
import org.hl7.fhir.r5.model.CodeSystem;
|
||||
|
|
@ -172,6 +174,36 @@ public abstract class ResourceRenderer extends DataRenderer {
|
|||
}
|
||||
}
|
||||
|
||||
public void render(Resource res, XhtmlNode x, DataType type) throws FHIRFormatError, DefinitionException, IOException {
|
||||
if (type instanceof Reference) {
|
||||
renderReference(res, x, (Reference) type);
|
||||
} else if (type instanceof CodeableReference) {
|
||||
CodeableReference cr = (CodeableReference) type;
|
||||
if (cr.hasReference()) {
|
||||
renderReference(res, x, cr.getReference());
|
||||
} else {
|
||||
render(x, type);
|
||||
}
|
||||
} else {
|
||||
render(x, type);
|
||||
}
|
||||
}
|
||||
|
||||
public void render(ResourceWrapper res, XhtmlNode x, DataType type) throws FHIRFormatError, DefinitionException, IOException {
|
||||
if (type instanceof Reference) {
|
||||
renderReference(res, x, (Reference) type);
|
||||
} else if (type instanceof CodeableReference) {
|
||||
CodeableReference cr = (CodeableReference) type;
|
||||
if (cr.hasReference()) {
|
||||
renderReference(res, x, cr.getReference());
|
||||
} else {
|
||||
render(x, type);
|
||||
}
|
||||
} else {
|
||||
render(x, type);
|
||||
}
|
||||
}
|
||||
|
||||
public void renderReference(Resource res, XhtmlNode x, Reference r) throws UnsupportedEncodingException, IOException {
|
||||
ResourceWrapper rw = new ResourceWrapperDirect(this.context, res);
|
||||
renderReference(rw, x, r);
|
||||
|
|
|
|||
Loading…
Reference in New Issue