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quality improvements on package conversion

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This commit is contained in:
Grahame Grieve 2020-04-09 19:38:28 +10:00
parent e0aee671ec
commit dd78fa7f07
1 changed files with 46 additions and 6 deletions
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50
org.hl7.fhir.convertors/src/main/java/org/hl7/fhir/convertors/NpmPackageVersionConverter.java
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@ -17,6 +17,11 @@ import org.apache.commons.compress.archivers.tar.TarArchiveOutputStream;
import org.apache.commons.compress.compressors.gzip.GzipCompressorInputStream; import org.apache.commons.compress.compressors.gzip.GzipCompressorInputStream;
import org.apache.commons.compress.compressors.gzip.GzipCompressorOutputStream; import org.apache.commons.compress.compressors.gzip.GzipCompressorOutputStream;
import org.hl7.fhir.dstu2.model.ClaimResponse.ErrorsComponent; import org.hl7.fhir.dstu2.model.ClaimResponse.ErrorsComponent;
import org.hl7.fhir.dstu2.model.Resource;
import org.hl7.fhir.exceptions.FHIRException;
import org.hl7.fhir.r4.model.Bundle.BundleEntryComponent;
import org.hl7.fhir.r4.model.CodeSystem;
import org.hl7.fhir.r4.model.ValueSet;
import org.hl7.fhir.utilities.TextFile; import org.hl7.fhir.utilities.TextFile;
import org.hl7.fhir.utilities.VersionUtilities; import org.hl7.fhir.utilities.VersionUtilities;
import org.hl7.fhir.utilities.cache.NpmPackageIndexBuilder; import org.hl7.fhir.utilities.cache.NpmPackageIndexBuilder;
@ -30,6 +35,39 @@ import com.google.gson.JsonObject;
public class NpmPackageVersionConverter { public class NpmPackageVersionConverter {
private class PR2Handler implements VersionConvertorAdvisor40 {
@Override
public boolean ignoreEntry(BundleEntryComponent src) {
return false;
}
@Override
public Resource convertR2(org.hl7.fhir.r4.model.Resource resource) throws FHIRException {
throw new Error("Not done yet");
}
@Override
public org.hl7.fhir.dstu2016may.model.Resource convertR2016May(org.hl7.fhir.r4.model.Resource resource) throws FHIRException {
throw new Error("Not done yet");
}
@Override
public org.hl7.fhir.dstu3.model.Resource convertR3(org.hl7.fhir.r4.model.Resource resource) throws FHIRException {
throw new Error("Not done yet");
}
@Override
public void handleCodeSystem(CodeSystem tgtcs, ValueSet source) throws FHIRException {
throw new Error("Not done yet");
}
@Override
public CodeSystem getCodeSystem(ValueSet src) throws FHIRException {
throw new Error("Not done yet");
}
}
private static final int BUFFER_SIZE = 1024; private static final int BUFFER_SIZE = 1024;
private String source; private String source;
@ -104,7 +142,9 @@ public class NpmPackageVersionConverter {
} }
} catch (Exception ex) { } catch (Exception ex) {
} }
output.put(e.getKey(), cnv); if (cnv != null && cnv.length > 0) {
output.put(e.getKey(), cnv);
}
} }
} }
@ -178,7 +218,6 @@ public class NpmPackageVersionConverter {
return JsonTrackingParser.write(json).getBytes(Charsets.UTF_8); return JsonTrackingParser.write(json).getBytes(Charsets.UTF_8);
} }
private byte[] convertResource(String n, byte[] cnt) { private byte[] convertResource(String n, byte[] cnt) {
try { try {
if (VersionUtilities.isR2Ver(currentVersion)) { if (VersionUtilities.isR2Ver(currentVersion)) {
@ -194,7 +233,7 @@ public class NpmPackageVersionConverter {
} else if (VersionUtilities.isR5Ver(version)) { } else if (VersionUtilities.isR5Ver(version)) {
return new org.hl7.fhir.r5.formats.JsonParser().composeBytes(VersionConvertor_10_50.convertResource(res)); return new org.hl7.fhir.r5.formats.JsonParser().composeBytes(VersionConvertor_10_50.convertResource(res));
} }
} else if (VersionUtilities.isR2BVer(version)) { } else if (VersionUtilities.isR2BVer(currentVersion)) {
org.hl7.fhir.dstu2016may.model.Resource res = new org.hl7.fhir.dstu2016may.formats.JsonParser().parse(cnt); org.hl7.fhir.dstu2016may.model.Resource res = new org.hl7.fhir.dstu2016may.formats.JsonParser().parse(cnt);
if (VersionUtilities.isR2Ver(version)) { if (VersionUtilities.isR2Ver(version)) {
return new org.hl7.fhir.dstu2.formats.JsonParser().composeBytes(VersionConvertor_10_30.convertResource(VersionConvertor_14_30.convertResource(res))); return new org.hl7.fhir.dstu2.formats.JsonParser().composeBytes(VersionConvertor_10_30.convertResource(VersionConvertor_14_30.convertResource(res)));
@ -223,7 +262,7 @@ public class NpmPackageVersionConverter {
} else if (VersionUtilities.isR4Ver(currentVersion)) { } else if (VersionUtilities.isR4Ver(currentVersion)) {
org.hl7.fhir.r4.model.Resource res = new org.hl7.fhir.r4.formats.JsonParser().parse(cnt); org.hl7.fhir.r4.model.Resource res = new org.hl7.fhir.r4.formats.JsonParser().parse(cnt);
if (VersionUtilities.isR2Ver(version)) { if (VersionUtilities.isR2Ver(version)) {
return new org.hl7.fhir.dstu2.formats.JsonParser().composeBytes(VersionConvertor_10_40.convertResource(res)); return new org.hl7.fhir.dstu2.formats.JsonParser().composeBytes(VersionConvertor_10_40.convertResource(res, new PR2Handler()));
} else if (VersionUtilities.isR2BVer(version)) { } else if (VersionUtilities.isR2BVer(version)) {
return new org.hl7.fhir.dstu2016may.formats.JsonParser().composeBytes(VersionConvertor_14_40.convertResource(res)); return new org.hl7.fhir.dstu2016may.formats.JsonParser().composeBytes(VersionConvertor_14_40.convertResource(res));
} else if (VersionUtilities.isR3Ver(version)) { } else if (VersionUtilities.isR3Ver(version)) {
@ -249,8 +288,9 @@ public class NpmPackageVersionConverter {
} }
throw new Error("Unknown version "+currentVersion+" -> "+version); throw new Error("Unknown version "+currentVersion+" -> "+version);
} catch (Exception ex) { } catch (Exception ex) {
ex.printStackTrace();
errors.add("Error converting "+n+": "+ex.getMessage()); errors.add("Error converting "+n+": "+ex.getMessage());
return cnt; return null;
} }
} }