mirror of
https://github.com/hapifhir/org.hl7.fhir.core.git
synced 2025-02-08 05:48:12 +00:00
move test cases to fhir-test-cases repository
This commit is contained in:
Grahame Grieve
commit
efd20a22fe
@ -260,6 +260,16 @@ public class Mimic14Importer {
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new JsonParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(dest), bnd);
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}
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/**
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* loinc COE 600-7 DATE TIME + CODE FOR OBSERVED - UPCODE TO snomed?
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*
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* Sensitivity = observation panel code of
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* code =
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* @param src
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* @param dest
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* @throws FileNotFoundException
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* @throws IOException
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*/
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private void processMicroEvents(String src, String dest) throws FileNotFoundException, IOException {
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System.out.print("Processing Micro Events... ");
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CSVReader csv = new CSVReader(new FileInputStream(src));
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@ -116,7 +116,7 @@ public class ProfileComparer implements ProfileKnowledgeProvider {
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this.folder = folder;
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if (!new File(Utilities.path(folder, "conparison-zip-marker.bin")).exists()) {
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String f = Utilities.path(folder, "comparison.zip");
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download("https://www.fhir.org/archive/comparison.zip", f);
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download("http://www.fhir.org/archive/comparison.zip", f);
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unzip(f, folder);
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}
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}
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@ -2595,14 +2595,26 @@ public class ProfileUtilities extends TranslatingUtilities {
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HierarchicalTableGenerator gen = new HierarchicalTableGenerator(imageFolder, inlineGraphics, true);
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gen.setTranslator(getTranslator());
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TableModel model = gen.initNormalTable(corePath, false, true);
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List<ElementDefinition> list = diff ? profile.getDifferential().getElement() : profile.getSnapshot().getElement();
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List<ElementDefinition> list = new ArrayList<>();
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if (diff)
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list.addAll(profile.getDifferential().getElement());
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else
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list.addAll(profile.getSnapshot().getElement());
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List<StructureDefinition> profiles = new ArrayList<StructureDefinition>();
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profiles.add(profile);
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if (list.isEmpty()) {
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ElementDefinition root = new ElementDefinition().setPath(profile.getType());
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root.setId(profile.getType());
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list.add(root);
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} else {
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if (list.get(0).getPath().contains(".")) {
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ElementDefinition root = new ElementDefinition().setPath(profile.getType());
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root.setId(profile.getType());
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list.add(0, root);
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}
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}
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if (diff)
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insertMissingSparseElements(list);
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genElement(defFile == null ? null : defFile+"#", gen, model.getRows(), list.get(0), list, profiles, diff, profileBaseFileName, null, snapshot, corePath, imagePath, true, logicalModel, profile.getDerivation() == TypeDerivationRule.CONSTRAINT && usesMustSupport(list), allInvariants, null);
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try {
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return gen.generate(model, imagePath, 0, outputTracker);
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@ -2612,6 +2624,46 @@ public class ProfileUtilities extends TranslatingUtilities {
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}
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private void insertMissingSparseElements(List<ElementDefinition> list) {
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int i = 1;
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while (i < list.size()) {
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String[] pathCurrent = list.get(i).getPath().split("\\.");
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String[] pathLast = list.get(i-1).getPath().split("\\.");
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int firstDiff = 0; // the first entry must be a match
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while (firstDiff < pathCurrent.length && firstDiff < pathLast.length && pathCurrent[firstDiff].equals(pathLast[firstDiff])) {
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firstDiff++;
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}
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if (!(isSibling(pathCurrent, pathLast, firstDiff) || isChild(pathCurrent, pathLast, firstDiff))) {
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// now work backwards down to lastMatch inserting missing path nodes
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for (int index = pathCurrent.length-2; index >= firstDiff; index--) {
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ElementDefinition root = new ElementDefinition().setPath(makePath(pathCurrent, index));
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root.setId(root.getPath());
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list.add(i, root);
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}
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}
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i++;
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}
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}
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private boolean isSibling(String[] pathCurrent, String[] pathLast, int firstDiff) {
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return pathCurrent.length == pathLast.length && firstDiff == pathCurrent.length-1;
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}
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private boolean isChild(String[] pathCurrent, String[] pathLast, int firstDiff) {
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return pathCurrent.length == pathLast.length+1 && firstDiff == pathLast.length;
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}
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private String makePath(String[] pathCurrent, int index) {
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CommaSeparatedStringBuilder b = new CommaSeparatedStringBuilder(".");
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for (int i = 0; i <= index; i++) {
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b.append(pathCurrent[i]);
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}
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return b.toString();
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}
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public XhtmlNode generateGrid(String defFile, StructureDefinition profile, String imageFolder, boolean inlineGraphics, String profileBaseFileName, String corePath, String imagePath, Set<String> outputTracker) throws IOException, FHIRException {
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HierarchicalTableGenerator gen = new HierarchicalTableGenerator(imageFolder, inlineGraphics, true);
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gen.setTranslator(getTranslator());
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@ -33,6 +33,7 @@ import javax.xml.parsers.DocumentBuilder;
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import javax.xml.parsers.DocumentBuilderFactory;
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import org.apache.commons.codec.binary.Base64;
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import org.apache.commons.io.IOUtils;
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import org.fhir.ucum.UcumEssenceService;
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import org.fhir.ucum.UcumException;
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import org.hl7.fhir.exceptions.FHIRException;
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@ -44,11 +45,13 @@ import org.hl7.fhir.utilities.TextFile;
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import org.hl7.fhir.utilities.Utilities;
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import org.hl7.fhir.utilities.cache.PackageCacheManager;
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import org.hl7.fhir.utilities.cache.ToolsVersion;
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import org.w3c.dom.Document;
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import org.w3c.dom.Element;
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import org.w3c.dom.NamedNodeMap;
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import org.w3c.dom.Node;
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import com.google.common.base.Charsets;
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import com.google.gson.JsonArray;
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import com.google.gson.JsonElement;
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import com.google.gson.JsonNull;
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@ -67,7 +70,7 @@ public class TestingUtilities {
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try {
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pcm = new PackageCacheManager(true, ToolsVersion.TOOLS_VERSION);
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fcontext = SimpleWorkerContext.fromPackage(pcm.loadPackage("hl7.fhir.core", "4.0.0"));
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fcontext.setUcumService(new UcumEssenceService(TestingUtilities.resourceNameToFile("ucum", "ucum-essence.xml")));
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fcontext.setUcumService(new UcumEssenceService(TestingUtilities.loadTestResourceStream("ucum", "ucum-essence.xml")));
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fcontext.setExpansionProfile(new Parameters());
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} catch (Exception e) {
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throw new Error(e);
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@ -439,14 +442,83 @@ public class TestingUtilities {
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return null;
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}
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public static boolean findTestResource(String... paths) throws IOException {
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System.out.println(System.getProperty("user.dir"));
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if (new File("../../fhir-test-cases").exists()) {
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String n = Utilities.path(System.getProperty("user.dir"), "..", "..", "fhir-test-cases", Utilities.path(paths));
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return new File(n).exists();
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} else {
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String classpath = ("/org/hl7/fhir/testcases/"+ Utilities.pathURL(paths));
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try {
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InputStream inputStream = TestingUtilities.class.getResourceAsStream(classpath);
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return inputStream != null;
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} catch (Throwable t) {
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return false;
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}
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}
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}
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public static String loadTestResource(String... paths) throws IOException {
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System.out.println(System.getProperty("user.dir"));
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if (new File("../../fhir-test-cases").exists()) {
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String n = Utilities.path(System.getProperty("user.dir"), "..", "..", "fhir-test-cases", Utilities.path(paths));
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// ok, we'll resolve this locally
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return TextFile.fileToString(new File(n));
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} else {
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// resolve from the package
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String contents;
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String classpath = ("/org/hl7/fhir/testcases/"+ Utilities.pathURL(paths));
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try (InputStream inputStream = TestingUtilities.class.getResourceAsStream(classpath)) {
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if (inputStream == null) {
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throw new IOException("Can't find file on classpath: " + classpath);
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}
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contents = IOUtils.toString(inputStream, Charsets.UTF_8);
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}
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return contents;
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}
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}
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public static String resourceNameToFile(String name) throws IOException {
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return Utilities.path(System.getProperty("user.dir"), "src", "test", "resources", name);
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public static InputStream loadTestResourceStream(String... paths) throws IOException {
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System.out.println(System.getProperty("user.dir"));
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if (new File("../../fhir-test-cases").exists()) {
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String n = Utilities.path(System.getProperty("user.dir"), "..", "..", "fhir-test-cases", Utilities.path(paths));
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return new FileInputStream(n);
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} else {
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String classpath = ("/org/hl7/fhir/testcases/"+ Utilities.pathURL(paths));
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return TestingUtilities.class.getResourceAsStream(classpath);
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}
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}
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public static byte[] loadTestResourceBytes(String... paths) throws IOException {
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System.out.println(System.getProperty("user.dir"));
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if (new File("../../fhir-test-cases").exists()) {
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String n = Utilities.path(System.getProperty("user.dir"), "..", "..", "fhir-test-cases", Utilities.path(paths));
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return TextFile.fileToBytes(n);
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} else {
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String classpath = ("/org/hl7/fhir/testcases/"+ Utilities.pathURL(paths));
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return TextFile.streamToBytes(TestingUtilities.class.getResourceAsStream(classpath));
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}
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}
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public static String resourceNameToFile(String subFolder, String name) throws IOException {
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return Utilities.path(System.getProperty("user.dir"), "src", "test", "resources", subFolder, name);
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public static String tempFile(String folder, String name) throws IOException {
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String tmp = tempFolder(folder);
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return Utilities.path(tmp, name);
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}
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public static String tempFolder(String name) throws IOException {
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if (new File("C:\\temp").exists()) {
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String path = Utilities.path("C:\\temp", name);
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Utilities.createDirectory(path);
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return path;
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} else if (new File("/tmp").exists()) {
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String path = Utilities.path("/tmp", name);
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Utilities.createDirectory(path);
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return path;
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} else {
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String path = Utilities.path(System.getProperty("java.io.tmpdir"), name);
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Utilities.createDirectory(path);
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return path;
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}
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}
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}
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@ -26,14 +26,17 @@ import java.io.ByteArrayOutputStream;
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import java.io.File;
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import java.io.IOException;
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import java.io.UnsupportedEncodingException;
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import java.nio.charset.Charset;
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import java.text.SimpleDateFormat;
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import java.util.ArrayList;
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import java.util.Calendar;
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import java.util.Date;
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import java.util.GregorianCalendar;
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import java.util.HashMap;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Locale;
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import java.util.Map;
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import java.util.Set;
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import java.util.TimeZone;
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@ -52,7 +55,9 @@ import org.hl7.fhir.utilities.CommaSeparatedStringBuilder;
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import org.hl7.fhir.utilities.TextFile;
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import org.hl7.fhir.utilities.Utilities;
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import org.hl7.fhir.utilities.cache.PackageGenerator.PackageType;
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import org.hl7.fhir.utilities.cache.NpmPackageIndexBuilder;
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import org.hl7.fhir.utilities.cache.ToolsVersion;
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import org.hl7.fhir.utilities.json.JsonTrackingParser;
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import com.google.gson.Gson;
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import com.google.gson.GsonBuilder;
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@ -63,7 +68,7 @@ public class NPMPackageGenerator {
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public enum Category {
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RESOURCE, EXAMPLE, OPENAPI, SCHEMATRON, RDF, OTHER, TOOL, TEMPLATE, JEKYLL;
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private String getDirectory() {
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switch (this) {
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case RESOURCE: return "/package/";
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@ -88,7 +93,9 @@ public class NPMPackageGenerator {
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private GzipCompressorOutputStream gzipOutputStream;
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private JsonObject packageJ;
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private JsonObject packageManifest;
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private NpmPackageIndexBuilder indexer;
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public NPMPackageGenerator(String destFile, String canonical, String url, PackageType kind, ImplementationGuide ig, Date date) throws FHIRException, IOException {
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super();
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this.destFile = destFile;
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@ -98,7 +105,7 @@ public class NPMPackageGenerator {
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fhirVersion.add(v.asStringValue());
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buildPackageJson(canonical, kind, url, date, ig, fhirVersion);
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}
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public static NPMPackageGenerator subset(NPMPackageGenerator master, String destFile, String id, String name, Date date) throws FHIRException, IOException {
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JsonObject p = master.packageJ.deepCopy();
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p.remove("name");
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@ -110,14 +117,14 @@ public class NPMPackageGenerator {
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return new NPMPackageGenerator(destFile, p, date);
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}
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public NPMPackageGenerator(String destFile, String canonical, String url, PackageType kind, ImplementationGuide ig, Date date, List<String> fhirVersion) throws FHIRException, IOException {
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super();
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this.destFile = destFile;
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start();
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buildPackageJson(canonical, kind, url, date, ig, fhirVersion);
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}
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public NPMPackageGenerator(String destFile, JsonObject npm, Date date) throws FHIRException, IOException {
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super();
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String dt = new SimpleDateFormat("yyyyMMddHHmmss").format(date);
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@ -135,13 +142,12 @@ public class NPMPackageGenerator {
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addFile(Category.RESOURCE, "package.json", json.getBytes("UTF-8"));
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} catch (UnsupportedEncodingException e) {
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}
|
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|
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}
|
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|
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private void buildPackageJson(String canonical, PackageType kind, String web, Date date, ImplementationGuide ig, List<String> fhirVersion) throws FHIRException, IOException {
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String dtHuman = new SimpleDateFormat("EEE, MMM d, yyyy HH:mmZ", new Locale("en", "US")).format(date);
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String dt = new SimpleDateFormat("yyyyMMddHHmmss").format(date);
|
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|
||||
|
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CommaSeparatedStringBuilder b = new CommaSeparatedStringBuilder();
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if (!ig.hasPackageId())
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b.append("packageId");
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@ -218,7 +224,7 @@ public class NPMPackageGenerator {
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packageManifest.addProperty("fhirVersion", fhirVersion.toString());
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packageManifest.addProperty("date", dt);
|
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packageManifest.addProperty("name", ig.getPackageId());
|
||||
|
||||
|
||||
}
|
||||
|
||||
|
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@ -256,6 +262,8 @@ public class NPMPackageGenerator {
|
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bufferedOutputStream = new BufferedOutputStream(OutputStream);
|
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gzipOutputStream = new GzipCompressorOutputStream(bufferedOutputStream);
|
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tar = new TarArchiveOutputStream(gzipOutputStream);
|
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indexer = new NpmPackageIndexBuilder();
|
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indexer.start();
|
||||
}
|
||||
|
||||
|
||||
@ -270,10 +278,14 @@ public class NPMPackageGenerator {
|
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tar.putArchiveEntry(entry);
|
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tar.write(content);
|
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tar.closeArchiveEntry();
|
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if(cat == Category.RESOURCE) {
|
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indexer.seeFile(name, content);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
public void finish() throws IOException {
|
||||
buildIndexJson();
|
||||
tar.finish();
|
||||
tar.close();
|
||||
gzipOutputStream.close();
|
||||
@ -286,6 +298,11 @@ public class NPMPackageGenerator {
|
||||
TextFile.stringToFile(json, Utilities.changeFileExt(destFile, ".manifest.json"), false);
|
||||
}
|
||||
|
||||
private void buildIndexJson() throws IOException {
|
||||
byte[] content = indexer.build().getBytes(Charset.forName("UTF-8"));
|
||||
addFile(Category.RESOURCE, ".index.json", content);
|
||||
}
|
||||
|
||||
public String filename() {
|
||||
return destFile;
|
||||
}
|
||||
@ -316,6 +333,6 @@ public class NPMPackageGenerator {
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
}
|
||||
|
||||
@ -7,6 +7,7 @@ import java.io.FileInputStream;
|
||||
import java.io.FileNotFoundException;
|
||||
import java.io.FileOutputStream;
|
||||
import java.io.IOException;
|
||||
import java.io.InputStream;
|
||||
|
||||
import org.hl7.fhir.exceptions.DefinitionException;
|
||||
import org.hl7.fhir.exceptions.FHIRException;
|
||||
@ -42,11 +43,11 @@ public class CDARoundTripTests {
|
||||
public void testCDA() throws FHIRFormatError, DefinitionException, FileNotFoundException, IOException, FHIRException {
|
||||
try {
|
||||
|
||||
String fileSource = TestingUtilities.resourceNameToFile("cda", "cda-original.xml");
|
||||
String roundTrip = TestingUtilities.resourceNameToFile("cda", "cda-roundtrip.xml");
|
||||
String jsonRoundTrip = TestingUtilities.resourceNameToFile("cda", "cda-roundtrip.json");
|
||||
InputStream fileSource = TestingUtilities.loadTestResourceStream("cda", "cda-original.xml");
|
||||
String roundTrip = TestingUtilities.tempFile("cda", "cda-roundtrip.xml");
|
||||
String jsonRoundTrip = TestingUtilities.tempFile("cda", "cda-roundtrip.json");
|
||||
|
||||
Element e = Manager.parse(context, new FileInputStream(fileSource), FhirFormat.XML);
|
||||
Element e = Manager.parse(context, fileSource, FhirFormat.XML);
|
||||
|
||||
Manager.compose(context, e, new FileOutputStream(roundTrip), FhirFormat.XML, OutputStyle.PRETTY, null);
|
||||
Manager.compose(context, e, new FileOutputStream(jsonRoundTrip), FhirFormat.JSON, OutputStyle.PRETTY, null);
|
||||
|
||||
@ -6,6 +6,7 @@ import java.io.ByteArrayInputStream;
|
||||
import java.io.ByteArrayOutputStream;
|
||||
import java.io.FileNotFoundException;
|
||||
import java.io.IOException;
|
||||
import java.io.InputStream;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
|
||||
@ -54,7 +55,7 @@ public class FHIRMappingLanguageTests implements ITransformerServices {
|
||||
@Parameters(name = "{index}: {0}")
|
||||
public static Iterable<Object[]> data()
|
||||
throws FileNotFoundException, IOException, ParserConfigurationException, SAXException {
|
||||
Document tests = XMLUtil.parseFileToDom(TestingUtilities.resourceNameToFile("fml", "manifest.xml"));
|
||||
Document tests = XMLUtil.parseToDom(TestingUtilities.loadTestResource("r5", "fml", "manifest.xml"));
|
||||
Element test = XMLUtil.getFirstChild(tests.getDocumentElement());
|
||||
List<Object[]> objects = new ArrayList<Object[]>();
|
||||
while (test != null && test.getNodeName().equals("test")) {
|
||||
@ -90,10 +91,10 @@ public class FHIRMappingLanguageTests implements ITransformerServices {
|
||||
@Test
|
||||
public void test() throws Exception {
|
||||
|
||||
String fileSource = TestingUtilities.resourceNameToFile("fml", source);
|
||||
String fileMap = TestingUtilities.resourceNameToFile("fml", map);
|
||||
String fileOutput = TestingUtilities.resourceNameToFile("fml", output);
|
||||
String fileOutputRes = TestingUtilities.resourceNameToFile("fml", output)+".out";
|
||||
InputStream fileSource = TestingUtilities.loadTestResourceStream("r5", "fml", source);
|
||||
InputStream fileMap = TestingUtilities.loadTestResourceStream("r5", "fml", map);
|
||||
String fileOutput = TestingUtilities.tempFile("fml", output);
|
||||
String fileOutputRes = TestingUtilities.tempFile("fml", output)+".out";
|
||||
|
||||
outputs.clear();
|
||||
|
||||
@ -103,8 +104,8 @@ public class FHIRMappingLanguageTests implements ITransformerServices {
|
||||
try {
|
||||
StructureMapUtilities scu = new StructureMapUtilities(context, this);
|
||||
org.hl7.fhir.r5.elementmodel.Element src = Manager.parse(context,
|
||||
new ByteArrayInputStream(TextFile.fileToBytes(fileSource)), FhirFormat.JSON);
|
||||
StructureMap structureMap = scu.parse(TextFile.fileToString(fileMap), name);
|
||||
new ByteArrayInputStream(TextFile.streamToBytes(fileSource)), FhirFormat.JSON);
|
||||
StructureMap structureMap = scu.parse(TextFile.streamToString(fileMap), name);
|
||||
String typeName = scu.getTargetType(structureMap).getType();
|
||||
resource = ResourceFactory.createResource(typeName);
|
||||
scu.transform(null, src, structureMap, resource);
|
||||
|
||||
@ -102,7 +102,7 @@ public class FHIRPathTests {
|
||||
|
||||
@Parameters(name = "{index}: file {0}")
|
||||
public static Iterable<Object[]> data() throws ParserConfigurationException, SAXException, IOException {
|
||||
Document dom = XMLUtil.parseFileToDom(TestingUtilities.resourceNameToFile("fhirpath", "tests-fhir-r4.xml"));
|
||||
Document dom = XMLUtil.parseToDom(TestingUtilities.loadTestResource("r5", "fhirpath", "tests-fhir-r4.xml"));
|
||||
|
||||
List<Element> list = new ArrayList<Element>();
|
||||
List<Element> groups = new ArrayList<Element>();
|
||||
@ -167,7 +167,7 @@ public class FHIRPathTests {
|
||||
else {
|
||||
res = resources.get(input);
|
||||
if (res == null) {
|
||||
res = new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile(input)));
|
||||
res = new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", input));
|
||||
resources.put(input, res);
|
||||
}
|
||||
fp.check(res, res.getResourceType().toString(), res.getResourceType().toString(), node);
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
package org.hl7.fhir.r5.test;
|
||||
|
||||
import org.apache.poi.util.IOUtils;
|
||||
import org.hl7.fhir.exceptions.FHIRException;
|
||||
import org.hl7.fhir.instance.model.api.IBaseReference;
|
||||
import org.hl7.fhir.instance.model.api.IBaseResource;
|
||||
@ -31,7 +32,9 @@ import javax.xml.parsers.ParserConfigurationException;
|
||||
import java.io.File;
|
||||
import java.io.FileInputStream;
|
||||
import java.io.FileNotFoundException;
|
||||
import java.io.FileOutputStream;
|
||||
import java.io.IOException;
|
||||
import java.io.InputStream;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
|
||||
@ -42,7 +45,7 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
|
||||
@Parameters(name = "{index}: {0}")
|
||||
public static Iterable<Object[]> data() throws FileNotFoundException, IOException, ParserConfigurationException, SAXException {
|
||||
Document tests = XMLUtil.parseFileToDom(TestingUtilities.resourceNameToFile("graphql", "manifest.xml"));
|
||||
Document tests = XMLUtil.parseToDom(TestingUtilities.loadTestResource("r5", "graphql", "manifest.xml"));
|
||||
Element test = XMLUtil.getFirstChild(tests.getDocumentElement());
|
||||
List<Object[]> objects = new ArrayList<Object[]>();
|
||||
while (test != null && test.getNodeName().equals("test")) {
|
||||
@ -71,22 +74,22 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
|
||||
@Test
|
||||
public void test() throws Exception {
|
||||
String filename = null;
|
||||
InputStream stream = null;
|
||||
if (!Utilities.noString(context)) {
|
||||
String[] parts = context.split("/");
|
||||
if (parts.length != 3)
|
||||
throw new Exception("not done yet "+source+" "+output+" "+context);
|
||||
if (!Utilities.noString(resource))
|
||||
filename = TestingUtilities.resourceNameToFile(resource+".xml");
|
||||
stream = TestingUtilities.loadTestResourceStream("r5", resource+".xml");
|
||||
else
|
||||
filename = TestingUtilities.resourceNameToFile(parts[0].toLowerCase()+"-"+parts[1].toLowerCase()+".xml");
|
||||
stream = TestingUtilities.loadTestResourceStream("r5", parts[0].toLowerCase()+"-"+parts[1].toLowerCase()+".xml");
|
||||
}
|
||||
|
||||
GraphQLEngine gql = new GraphQLEngine(TestingUtilities.context());
|
||||
gql.setServices(this);
|
||||
if (!Utilities.noString(filename))
|
||||
gql.setFocus(new XmlParser().parse(new FileInputStream(filename)));
|
||||
gql.setGraphQL(Parser.parseFile(TestingUtilities.resourceNameToFile("graphql", source)));
|
||||
if (stream != null)
|
||||
gql.setFocus(new XmlParser().parse(stream));
|
||||
gql.setGraphQL(Parser.parse(TestingUtilities.loadTestResource("r5", "graphql", source)));
|
||||
gql.getGraphQL().setOperationName(operation);
|
||||
gql.getGraphQL().getVariables().add(new Argument("var", new NameValue("true")));
|
||||
boolean ok = false;
|
||||
@ -105,8 +108,10 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
StringBuilder str = new StringBuilder();
|
||||
gql.getOutput().setWriteWrapper(false);
|
||||
gql.getOutput().write(str, 0);
|
||||
TextFile.stringToFile(str.toString(), TestingUtilities.resourceNameToFile("graphql", output+".out"));
|
||||
msg = TestingUtilities.checkJsonIsSame(TestingUtilities.resourceNameToFile("graphql", output+".out"), TestingUtilities.resourceNameToFile("graphql", output));
|
||||
IOUtils.copy(TestingUtilities.loadTestResourceStream("r5", "graphql", source), new FileOutputStream(TestingUtilities.tempFile("graphql", source)));
|
||||
IOUtils.copy(TestingUtilities.loadTestResourceStream("r5", "graphql", output), new FileOutputStream(TestingUtilities.tempFile("graphql", output)));
|
||||
TextFile.stringToFile(str.toString(), TestingUtilities.tempFile("graphql", output+".out"));
|
||||
msg = TestingUtilities.checkJsonIsSame(TestingUtilities.tempFile("graphql", output+".out"), TestingUtilities.tempFile("graphql", output));
|
||||
assertTrue(msg, Utilities.noString(msg));
|
||||
}
|
||||
else
|
||||
@ -116,11 +121,11 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
@Override
|
||||
public Resource lookup(Object appInfo, String type, String id) throws FHIRException {
|
||||
try {
|
||||
String filename = TestingUtilities.resourceNameToFile(type.toLowerCase()+'-'+id.toLowerCase()+".xml");
|
||||
if (new File(filename).exists())
|
||||
return new XmlParser().parse(new FileInputStream(filename));
|
||||
else
|
||||
if (TestingUtilities.findTestResource("r5", type.toLowerCase()+'-'+id.toLowerCase()+".xml")) {
|
||||
return new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", type.toLowerCase()+'-'+id.toLowerCase()+".xml"));
|
||||
} else {
|
||||
return null;
|
||||
}
|
||||
} catch (Exception e) {
|
||||
throw new FHIRException(e);
|
||||
}
|
||||
@ -139,9 +144,8 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
}
|
||||
} else {
|
||||
String[] parts = reference.getReferenceElement().getValue().split("/");
|
||||
String filename = TestingUtilities.resourceNameToFile(parts[0].toLowerCase()+'-'+parts[1].toLowerCase()+".xml");
|
||||
if (new File(filename).exists())
|
||||
return new ReferenceResolution(null, new XmlParser().parse(new FileInputStream(filename)));
|
||||
if (TestingUtilities.findTestResource("r5", parts[0].toLowerCase()+'-'+parts[1].toLowerCase()+".xml"))
|
||||
return new ReferenceResolution(null, new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", parts[0].toLowerCase()+'-'+parts[1].toLowerCase()+".xml")));
|
||||
}
|
||||
return null;
|
||||
} catch (Exception e) {
|
||||
@ -153,10 +157,10 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
public void listResources(Object appInfo, String type, List<Argument> searchParams, List<IBaseResource> matches) throws FHIRException {
|
||||
try {
|
||||
if (type.equals("Condition"))
|
||||
matches.add(new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("condition-example.xml"))));
|
||||
matches.add(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "condition-example.xml")));
|
||||
else if (type.equals("Patient")) {
|
||||
matches.add(new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("patient-example.xml"))));
|
||||
matches.add(new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("patient-example-xds.xml"))));
|
||||
matches.add(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "patient-example.xml")));
|
||||
matches.add(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "patient-example-xds.xml")));
|
||||
}
|
||||
} catch (Exception e) {
|
||||
throw new FHIRException(e);
|
||||
@ -175,10 +179,10 @@ public class GraphQLEngineTests implements IGraphQLStorageServices {
|
||||
bl.setUrl("http://test.fhir.org/r4/Patient?_format=text/xhtml&search-id=77c97e03-8a6c-415f-a63d-11c80cf73f&&active=true&_sort=_id&search-offset=0&_count=50");
|
||||
BundleEntryComponent be = bnd.addEntry();
|
||||
be.setFullUrl("http://hl7.org/fhir/Patient/example");
|
||||
be.setResource(new XmlParser().parse(new FileInputStream(Utilities.path(TestingUtilities.resourceNameToFile("patient-example.xml")))));
|
||||
be.setResource(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "patient-example.xml")));
|
||||
be = bnd.addEntry();
|
||||
be.setFullUrl("http://hl7.org/fhir/Patient/example");
|
||||
be.setResource(new XmlParser().parse(new FileInputStream(Utilities.path(TestingUtilities.resourceNameToFile("patient-example-xds.xml")))));
|
||||
be.setResource(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "patient-example-xds.xml")));
|
||||
be.getSearch().setScore(0.5);
|
||||
be.getSearch().setMode(SearchEntryMode.MATCH);
|
||||
bnd.setTotal(50);
|
||||
|
||||
@ -24,7 +24,7 @@ public class GraphQLParserTests {
|
||||
|
||||
@Parameters(name = "{index}: {0}")
|
||||
public static Iterable<Object[]> data() throws FileNotFoundException, IOException {
|
||||
String src = TextFile.fileToString(TestingUtilities.resourceNameToFile("graphql", "parser-tests.gql"));
|
||||
String src = TestingUtilities.loadTestResource("r5", "graphql", "parser-tests.gql");
|
||||
String[] tests = src.split("###");
|
||||
int i = 0;
|
||||
for (String s : tests)
|
||||
|
||||
@ -44,7 +44,7 @@ public class LiquidEngineTests implements ILiquidEngineIcludeResolver {
|
||||
|
||||
@Parameters(name = "{index}: file{0}")
|
||||
public static Iterable<Object[]> data() throws ParserConfigurationException, SAXException, IOException {
|
||||
testdoc = (JsonObject) new com.google.gson.JsonParser().parse(TextFile.fileToString(TestingUtilities.resourceNameToFile("liquid", "liquid-tests.json")));
|
||||
testdoc = (JsonObject) new com.google.gson.JsonParser().parse(TestingUtilities.loadTestResource("r5", "liquid", "liquid-tests.json"));
|
||||
JsonArray tests = testdoc.getAsJsonArray("tests");
|
||||
List<Object[]> objects = new ArrayList<Object[]>(tests.size());
|
||||
for (JsonElement n : tests) {
|
||||
@ -76,8 +76,7 @@ public class LiquidEngineTests implements ILiquidEngineIcludeResolver {
|
||||
private Resource loadResource() throws IOException, FHIRFormatError {
|
||||
String name = test.get("focus").getAsString();
|
||||
if (!resources.containsKey(name)) {
|
||||
String fn = TestingUtilities.resourceNameToFile((name.replace("/", "-")+".xml").toLowerCase());
|
||||
resources.put(name, new XmlParser().parse(new FileInputStream(fn)));
|
||||
resources.put(name, new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", (name.replace("/", "-")+".xml").toLowerCase())));
|
||||
}
|
||||
return resources.get(test.get("focus").getAsString());
|
||||
}
|
||||
|
||||
@ -4,6 +4,7 @@ import java.io.FileInputStream;
|
||||
import java.io.FileNotFoundException;
|
||||
import java.io.FileOutputStream;
|
||||
import java.io.IOException;
|
||||
import java.io.InputStream;
|
||||
|
||||
import org.fhir.ucum.UcumException;
|
||||
import org.hl7.fhir.exceptions.FHIRException;
|
||||
@ -35,14 +36,14 @@ public class NarrativeGeneratorTests {
|
||||
|
||||
@Test
|
||||
public void test() throws FileNotFoundException, IOException, XmlPullParserException, EOperationOutcome, FHIRException {
|
||||
process(TestingUtilities.resourceNameToFile("questionnaireresponse-example-f201-lifelines.xml"));
|
||||
process(TestingUtilities.loadTestResourceStream("r5", "questionnaireresponse-example-f201-lifelines.xml"));
|
||||
}
|
||||
|
||||
private void process(String path) throws FileNotFoundException, IOException, XmlPullParserException, EOperationOutcome, FHIRException {
|
||||
private void process(InputStream stream) throws FileNotFoundException, IOException, XmlPullParserException, EOperationOutcome, FHIRException {
|
||||
XmlParser p = new XmlParser();
|
||||
DomainResource r = (DomainResource) p.parse(new FileInputStream(path));
|
||||
DomainResource r = (DomainResource) p.parse(stream);
|
||||
gen.generate(r, null);
|
||||
FileOutputStream s = new FileOutputStream(TestingUtilities.resourceNameToFile("gen", "gen.xml"));
|
||||
FileOutputStream s = new FileOutputStream(TestingUtilities.tempFile("gen", "gen.xml"));
|
||||
new XmlParser().compose(s, r, true);
|
||||
s.close();
|
||||
|
||||
|
||||
@ -4,6 +4,7 @@ import java.io.FileInputStream;
|
||||
import java.io.FileNotFoundException;
|
||||
import java.io.FileOutputStream;
|
||||
import java.io.IOException;
|
||||
import java.io.InputStream;
|
||||
|
||||
import org.hl7.fhir.exceptions.FHIRFormatError;
|
||||
import org.hl7.fhir.r5.formats.JsonParser;
|
||||
@ -19,22 +20,22 @@ public class OpenApiGeneratorTest {
|
||||
|
||||
@Test
|
||||
public void testBase1() throws IOException, FHIRFormatError {
|
||||
String sfn = TestingUtilities.resourceNameToFile("openapi", "cs-base.json");
|
||||
String dfn = TestingUtilities.resourceNameToFile("openapi", "swagger-base.json");
|
||||
InputStream sfn = TestingUtilities.loadTestResourceStream("r5", "openapi", "cs-base.json");
|
||||
String dfn = TestingUtilities.tempFile("openapi", "swagger-base.json");
|
||||
|
||||
run(sfn, dfn);
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testBase2() throws FHIRFormatError, FileNotFoundException, IOException {
|
||||
String sfn = TestingUtilities.resourceNameToFile("openapi", "cs-base2.json");
|
||||
String dfn = TestingUtilities.resourceNameToFile("openapi", "swagger-base2.json");
|
||||
InputStream sfn = TestingUtilities.loadTestResourceStream("r5", "openapi", "cs-base2.json");
|
||||
String dfn = TestingUtilities.tempFile("openapi", "swagger-base2.json");
|
||||
|
||||
run(sfn, dfn);
|
||||
}
|
||||
|
||||
public void run(String sfn, String dfn) throws IOException, FHIRFormatError, FileNotFoundException {
|
||||
CapabilityStatement cs = (CapabilityStatement) new JsonParser().parse(new FileInputStream(sfn));
|
||||
public void run(InputStream sfn, String dfn) throws IOException, FHIRFormatError, FileNotFoundException {
|
||||
CapabilityStatement cs = (CapabilityStatement) new JsonParser().parse(sfn);
|
||||
Writer oa = new Writer(new FileOutputStream(dfn));
|
||||
OpenApiGenerator gen = new OpenApiGenerator(TestingUtilities.context(), cs, oa);
|
||||
gen.generate("test-lic", "http://spdx.org/licenses/test-lic.html");
|
||||
|
||||
@ -8,6 +8,7 @@ import java.io.FileOutputStream;
|
||||
import java.io.IOException;
|
||||
import java.io.InputStream;
|
||||
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.fhir.ucum.UcumException;
|
||||
import org.hl7.fhir.exceptions.FHIRException;
|
||||
import org.hl7.fhir.r5.context.SimpleWorkerContext;
|
||||
@ -33,9 +34,10 @@ public class ResourceRoundTripTests {
|
||||
|
||||
@Test
|
||||
public void test() throws FileNotFoundException, IOException, FHIRException, EOperationOutcome, UcumException {
|
||||
Resource res = new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("unicode.xml")));
|
||||
Resource res = new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "unicode.xml"));
|
||||
new NarrativeGenerator("", "", TestingUtilities.context()).generate((DomainResource) res, null);
|
||||
new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(TestingUtilities.resourceNameToFile("gen", "unicode.out.xml")), res);
|
||||
IOUtils.copy(TestingUtilities.loadTestResourceStream("r5", "unicode.xml"), new FileOutputStream(TestingUtilities.tempFile("gen", "unicode.xml")));
|
||||
new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(TestingUtilities.tempFile("gen", "unicode.out.xml")), res);
|
||||
}
|
||||
|
||||
|
||||
|
||||
@ -14,6 +14,7 @@ import java.util.Set;
|
||||
|
||||
import javax.xml.parsers.ParserConfigurationException;
|
||||
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.apache.commons.lang3.NotImplementedException;
|
||||
import org.hl7.fhir.exceptions.DefinitionException;
|
||||
import org.hl7.fhir.exceptions.FHIRException;
|
||||
@ -165,16 +166,16 @@ public class SnapShotGenerationTests {
|
||||
this.output = output;
|
||||
}
|
||||
public void load() throws FHIRFormatError, FileNotFoundException, IOException {
|
||||
if (new File(TestingUtilities.resourceNameToFile("snapshot-generation", id+"-input.json")).exists())
|
||||
source = (StructureDefinition) new JsonParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("snapshot-generation", id+"-input.json")));
|
||||
if (TestingUtilities.findTestResource("r5", "snapshot-generation", id+"-input.json"))
|
||||
source = (StructureDefinition) new JsonParser().parse(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", id+"-input.json"));
|
||||
else
|
||||
source = (StructureDefinition) new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("snapshot-generation", id+"-input.xml")));
|
||||
source = (StructureDefinition) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", id+"-input.xml"));
|
||||
if (!fail)
|
||||
expected = (StructureDefinition) new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("snapshot-generation", id+"-expected.xml")));
|
||||
expected = (StructureDefinition) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", id+"-expected.xml"));
|
||||
if (!Utilities.noString(include))
|
||||
included = (StructureDefinition) new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("snapshot-generation", include+".xml")));
|
||||
included = (StructureDefinition) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", include+".xml"));
|
||||
if (!Utilities.noString(register)) {
|
||||
included = (StructureDefinition) new XmlParser().parse(new FileInputStream(TestingUtilities.resourceNameToFile("snapshot-generation", register+".xml")));
|
||||
included = (StructureDefinition) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", register+".xml"));
|
||||
}
|
||||
}
|
||||
}
|
||||
@ -373,7 +374,7 @@ public class SnapShotGenerationTests {
|
||||
public static Iterable<Object[]> data() throws ParserConfigurationException, IOException, FHIRFormatError, SAXException {
|
||||
|
||||
SnapShotGenerationTestsContext context = new SnapShotGenerationTestsContext();
|
||||
Document tests = XMLUtil.parseFileToDom(TestingUtilities.resourceNameToFile("snapshot-generation", "manifest.xml"));
|
||||
Document tests = XMLUtil.parseToDom(TestingUtilities.loadTestResource("r5", "snapshot-generation", "manifest.xml"));
|
||||
Element test = XMLUtil.getFirstChild(tests.getDocumentElement());
|
||||
List<Object[]> objects = new ArrayList<Object[]>();
|
||||
while (test != null && test.getNodeName().equals("test")) {
|
||||
@ -440,7 +441,8 @@ public class SnapShotGenerationTests {
|
||||
pu.sortDifferential(base, test.getOutput(), test.getOutput().getUrl(), errors);
|
||||
if (!errors.isEmpty())
|
||||
throw new FHIRException(errors.get(0));
|
||||
new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(TestingUtilities.resourceNameToFile("snapshot-generation", test.getId()+"-actual.xml")), test.getOutput());
|
||||
IOUtils.copy(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", test.getId()+"-expected.xml"), new FileOutputStream(TestingUtilities.tempFile("snapshot", test.getId()+"-expected.xml")));
|
||||
new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(TestingUtilities.tempFile("snapshot", test.getId()+"-actual.xml")), test.getOutput());
|
||||
Assert.assertTrue("Output does not match expected", test.expected.equalsDeep(test.output));
|
||||
}
|
||||
|
||||
@ -482,7 +484,8 @@ public class SnapShotGenerationTests {
|
||||
new NarrativeGenerator("", "http://hl7.org/fhir", TestingUtilities.context()).setPkp(new TestPKP()).generate(output, null);
|
||||
test.output = output;
|
||||
TestingUtilities.context().cacheResource(output);
|
||||
new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(TestingUtilities.resourceNameToFile("snapshot-generation", test.getId()+"-actual.xml")), output);
|
||||
IOUtils.copy(TestingUtilities.loadTestResourceStream("r5", "snapshot-generation", test.getId()+"-expected.xml"), new FileOutputStream(TestingUtilities.tempFile("snapshot", test.getId()+"-expected.xml")));
|
||||
new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(TestingUtilities.tempFile("snapshot", test.getId()+"-actual.xml")), output);
|
||||
StructureDefinition t1 = test.expected.copy();
|
||||
t1.setText(null);
|
||||
StructureDefinition t2 = test.output.copy();
|
||||
|
||||
@ -40,8 +40,8 @@ public class StructureMapUtilitiesTest implements ITransformerServices{
|
||||
throws FileNotFoundException, IOException, XmlPullParserException, EOperationOutcome, FHIRException {
|
||||
|
||||
StructureMapUtilities scu = new StructureMapUtilities(context, this);
|
||||
String fileMap = TestingUtilities.resourceNameToFile("fml", "ActivityDefinition.map");
|
||||
StructureMap structureMap = scu.parse(TextFile.fileToString(fileMap), "ActivityDefinition3To4");
|
||||
String fileMap = TestingUtilities.loadTestResource("r5", "fml", "ActivityDefinition.map");
|
||||
StructureMap structureMap = scu.parse(fileMap, "ActivityDefinition3To4");
|
||||
|
||||
// StructureMap/ActivityDefinition3to4: StructureMap.group[3].rule[2].name error id value '"expression"' is not valid
|
||||
assertEquals("expression",structureMap.getGroup().get(2).getRule().get(1).getName());
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@ -1,77 +0,0 @@
|
||||
@prefix fhir: <http://hl7.org/fhir/> .
|
||||
@prefix owl: <http://www.w3.org/2002/07/owl#> .
|
||||
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
|
||||
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
|
||||
|
||||
# - resource -------------------------------------------------------------------
|
||||
|
||||
<http://hl7.org/fhir/Bundle/bundle-example> a fhir:Bundle;
|
||||
fhir:nodeRole fhir:treeRoot;
|
||||
fhir:Resource.id [ fhir:value "bundle-example"];
|
||||
fhir:Resource.meta [
|
||||
fhir:Meta.lastUpdated [ fhir:value "2014-08-18T01:43:30Z"^^xsd:dateTime ]
|
||||
];
|
||||
fhir:Bundle.type [ fhir:value "searchset"];
|
||||
fhir:Bundle.total [ fhir:value "3"^^xsd:nonNegativeInteger];
|
||||
fhir:Bundle.link [
|
||||
fhir:index 0;
|
||||
fhir:Bundle.link.relation [ fhir:value "self" ];
|
||||
fhir:Bundle.link.url [ fhir:value "https://example.com/base/MedicationRequest?patient=347&_include=MedicationRequest.medication&_count=2" ]
|
||||
], [
|
||||
fhir:index 1;
|
||||
fhir:Bundle.link.relation [ fhir:value "next" ];
|
||||
fhir:Bundle.link.url [ fhir:value "https://example.com/base/MedicationRequest?patient=347&searchId=ff15fd40-ff71-4b48-b366-09c706bed9d0&page=2" ]
|
||||
];
|
||||
fhir:Bundle.entry [
|
||||
fhir:index 0;
|
||||
fhir:Bundle.entry.fullUrl [ fhir:value "https://example.com/base/MedicationRequest/3123" ];
|
||||
fhir:Bundle.entry.resource <https://example.com/base/MedicationRequest/3123>;
|
||||
fhir:Bundle.entry.search [
|
||||
fhir:Bundle.entry.search.mode [ fhir:value "match" ];
|
||||
fhir:Bundle.entry.search.score [ fhir:value "1"^^xsd:decimal ]
|
||||
]
|
||||
], [
|
||||
fhir:index 1;
|
||||
fhir:Bundle.entry.fullUrl [ fhir:value "https://example.com/base/Medication/example" ];
|
||||
fhir:Bundle.entry.resource <https://example.com/base/Medication/example>;
|
||||
fhir:Bundle.entry.search [
|
||||
fhir:Bundle.entry.search.mode [ fhir:value "include" ]
|
||||
]
|
||||
] .
|
||||
|
||||
<https://example.com/base/MedicationRequest/3123> a fhir:MedicationRequest;
|
||||
fhir:Resource.id [ fhir:value "3123"];
|
||||
fhir:DomainResource.text [
|
||||
fhir:Narrative.status [ fhir:value "generated" ];
|
||||
fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: 3123</p><p><b>status</b>: unknown</p><p><b>intent</b>: order</p><p><b>medication</b>: <a>Medication/example</a></p><p><b>subject</b>: <a>Patient/347</a></p></div>"
|
||||
];
|
||||
fhir:MedicationRequest.status [ fhir:value "unknown"];
|
||||
fhir:MedicationRequest.intent [ fhir:value "order"];
|
||||
fhir:MedicationRequest.medicationReference [
|
||||
fhir:link <http://hl7.org/fhir/Medication/example>;
|
||||
fhir:Reference.reference [ fhir:value "Medication/example" ]
|
||||
];
|
||||
fhir:MedicationRequest.subject [
|
||||
fhir:link <http://hl7.org/fhir/Patient/347>;
|
||||
fhir:Reference.reference [ fhir:value "Patient/347" ]
|
||||
] .
|
||||
|
||||
<http://hl7.org/fhir/Medication/example> a fhir:Medication .
|
||||
|
||||
<http://hl7.org/fhir/Patient/347> a fhir:Patient .
|
||||
|
||||
<https://example.com/base/Medication/example> a fhir:Medication;
|
||||
fhir:Resource.id [ fhir:value "example"];
|
||||
fhir:DomainResource.text [
|
||||
fhir:Narrative.status [ fhir:value "generated" ];
|
||||
fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: example</p></div>"
|
||||
] .
|
||||
|
||||
# - ontology header ------------------------------------------------------------
|
||||
|
||||
<http://hl7.org/fhir/Bundle/bundle-example.ttl> a owl:Ontology;
|
||||
owl:imports fhir:fhir.ttl;
|
||||
owl:versionIRI <http://build.fhir.org/Bundle/bundle-example.ttl> .
|
||||
|
||||
# -------------------------------------------------------------------------------------
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
@ -1,60 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?><Condition xmlns="http://hl7.org/fhir">
|
||||
<id value="example"/>
|
||||
<text>
|
||||
<status value="generated"/>
|
||||
<div xmlns="http://www.w3.org/1999/xhtml">Severe burn of left ear (Date: 24-May 2012)</div>
|
||||
</text>
|
||||
<clinicalStatus>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/condition-clinical"/>
|
||||
<code value="active"/>
|
||||
</coding>
|
||||
</clinicalStatus>
|
||||
|
||||
<verificationStatus>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/condition-ver-status"/>
|
||||
<code value="confirmed"/>
|
||||
</coding>
|
||||
</verificationStatus>
|
||||
<category>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/condition-category"/>
|
||||
<code value="encounter-diagnosis"/>
|
||||
<display value="Encounter Diagnosis"/>
|
||||
</coding>
|
||||
<!-- and also a SNOMED CT coding -->
|
||||
<coding>
|
||||
<system value="http://snomed.info/sct"/>
|
||||
<code value="439401001"/>
|
||||
<display value="Diagnosis"/>
|
||||
</coding>
|
||||
</category>
|
||||
<severity>
|
||||
<coding>
|
||||
<system value="http://snomed.info/sct"/>
|
||||
<code value="24484000"/>
|
||||
<display value="Severe"/>
|
||||
</coding>
|
||||
</severity>
|
||||
<code>
|
||||
<coding>
|
||||
<system value="http://snomed.info/sct"/>
|
||||
<code value="39065001"/>
|
||||
<display value="Burn of ear"/>
|
||||
</coding>
|
||||
<text value="Burnt Ear"/>
|
||||
</code>
|
||||
<bodySite>
|
||||
<coding>
|
||||
<system value="http://snomed.info/sct"/>
|
||||
<code value="49521004"/>
|
||||
<display value="Left external ear structure"/>
|
||||
</coding>
|
||||
<text value="Left Ear"/>
|
||||
</bodySite>
|
||||
<subject>
|
||||
<reference value="Patient/example"/>
|
||||
</subject>
|
||||
<onsetDateTime value="2012-05-24"/>
|
||||
</Condition>
|
||||
File diff suppressed because it is too large
Load Diff
@ -1 +0,0 @@
|
||||
*.out
|
||||
@ -1,64 +0,0 @@
|
||||
map "http://hl7.org/fhir/StructureMap/ActivityDefinition3to4" = "R3 to R4 Conversions for ActivityDefinition"
|
||||
|
||||
uses "http://hl7.org/fhir/3.0/StructureDefinition/ActivityDefinition" alias ActivityDefinitionR3 as source
|
||||
uses "http://hl7.org/fhir/StructureDefinition/ActivityDefinition" alias ActivityDefinition as target
|
||||
|
||||
imports "http://hl7.org/fhir/StructureMap/*3to4"
|
||||
|
||||
group ActivityDefinition(source src : ActivityDefinitionR3, target tgt : ActivityDefinition) extends DomainResource <<type+>> {
|
||||
src.url -> tgt.url;
|
||||
src.identifier -> tgt.identifier;
|
||||
src.version -> tgt.version;
|
||||
src.name -> tgt.name;
|
||||
src.title -> tgt.title;
|
||||
src.subtitle -> tgt.subtitle;
|
||||
src.status -> tgt.status;
|
||||
src.experimental -> tgt.experimental;
|
||||
src.subject -> tgt.subject;
|
||||
src.date -> tgt.date;
|
||||
src.publisher -> tgt.publisher;
|
||||
src.contact -> tgt.contact;
|
||||
src.description -> tgt.description;
|
||||
src.useContext -> tgt.useContext;
|
||||
src.jurisdiction -> tgt.jurisdiction;
|
||||
src.purpose -> tgt.purpose;
|
||||
src.usage -> tgt.usage;
|
||||
src.copyright -> tgt.copyright;
|
||||
src.approvalDate -> tgt.approvalDate;
|
||||
src.lastReviewDate -> tgt.lastReviewDate;
|
||||
src.effectivePeriod -> tgt.effectivePeriod;
|
||||
src.topic -> tgt.topic;
|
||||
src.contributor as vs where type = 'author' -> tgt.author as vt then Contributor(vs, vt);
|
||||
src.contributor as vs where type = 'editor' -> tgt.editor as vt then Contributor(vs, vt);
|
||||
src.contributor as vs where type = 'reviewer' -> tgt.reviewer as vt then Contributor(vs, vt);
|
||||
src.contributor as vs where type = 'endorser' -> tgt.endorser as vt then Contributor(vs, vt);
|
||||
src.relatedArtifact -> tgt.relatedArtifact;
|
||||
src.library -> tgt.library;
|
||||
src.kind as v -> tgt.kind = translate(v, 'http://hl7.org/fhir/StructureMap/ConceptMaps3to4#ResourceTypeMap', 'code');
|
||||
src.code -> tgt.code;
|
||||
src.doNotPerform -> tgt.doNotPerform;
|
||||
src.timing -> tgt.timing;
|
||||
src.location -> tgt.location;
|
||||
src.participant as s -> tgt.participant as t then ActivityDefinitionParticipant(s, t);
|
||||
src.product -> tgt.product;
|
||||
src.quantity -> tgt.quantity;
|
||||
src.dosage -> tgt.dosage;
|
||||
src.bodySite -> tgt.bodySite;
|
||||
src.specimenRequirement -> tgt.specimenRequirement;
|
||||
src.transform -> tgt.transform;
|
||||
src.dynamicValue as s -> tgt.dynamicValue as t then ActivityDefinitionDynamicValue(s, t);
|
||||
}
|
||||
|
||||
group ActivityDefinitionParticipant(source src, target tgt) extends BackboneElement {
|
||||
src.type -> tgt.type;
|
||||
src.role -> tgt.role;
|
||||
}
|
||||
|
||||
group ActivityDefinitionDynamicValue(source src, target tgt) extends BackboneElement {
|
||||
src.path -> tgt.path;
|
||||
src as vs where vs.type.exists().not() -> tgt.expression = create('Expression') as vt then {
|
||||
vs.description -> vt.description;
|
||||
vs.language -> vt.language;
|
||||
vs.expression -> vt.expression;
|
||||
} "expression";
|
||||
}
|
||||
@ -1,6 +0,0 @@
|
||||
<fml-tests>
|
||||
<test name="http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2patassignment" source="qr.json" map="qr2pat-assignment.map" output="qr2pat-assignment-res.json" />
|
||||
<test name="http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2patgender" source="qr.json" map="qr2pat-gender.map" output="qr2pat-gender-res.json" />
|
||||
<test name="http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2pathumannametwice" source="qr.json" map="qr2pat-humannametwice.map" output="qr2pat-humannametwice-res.json" />
|
||||
<test name="http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2pathumannameshared" source="qr.json" map="qr2pat-humannameshared.map" output="qr2pat-humannameshared-res.json" />
|
||||
</fml-tests>
|
||||
@ -1,39 +0,0 @@
|
||||
{
|
||||
"resourceType": "QuestionnaireResponse",
|
||||
"status": "in-progress",
|
||||
"item": [
|
||||
{
|
||||
"linkId": "patient",
|
||||
"text": "Patient",
|
||||
"item": [
|
||||
{
|
||||
"linkId": "patient.lastname",
|
||||
"text": "Name",
|
||||
"answer": [
|
||||
{
|
||||
"valueString": "Brönnimann-Bertholet"
|
||||
}
|
||||
]
|
||||
},
|
||||
{
|
||||
"linkId": "patient.firstname",
|
||||
"text": "Vorname",
|
||||
"answer": [
|
||||
{
|
||||
"valueString": "Elisabeth"
|
||||
}
|
||||
]
|
||||
},
|
||||
{
|
||||
"linkId": "patient.sex",
|
||||
"text": "Geschlecht",
|
||||
"answer": [
|
||||
{
|
||||
"valueString": "female"
|
||||
}
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
@ -1,4 +0,0 @@
|
||||
{
|
||||
"resourceType" : "Patient",
|
||||
"gender" : "female"
|
||||
}
|
||||
@ -1,8 +0,0 @@
|
||||
map "http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2patassignment" = "qr2patassignment"
|
||||
|
||||
uses "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse" alias QuestionnaireResponse as source
|
||||
uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as target
|
||||
|
||||
group QuestionnaireResponse(source src : QuestionnaireResponse, target tgt : Patient) {
|
||||
src -> tgt.gender = 'female' "Simple Assignment";
|
||||
}
|
||||
@ -1,4 +0,0 @@
|
||||
{
|
||||
"resourceType" : "Patient",
|
||||
"gender" : "female"
|
||||
}
|
||||
@ -1,12 +0,0 @@
|
||||
map "http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2patgender" = "qr2patgender"
|
||||
|
||||
uses "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse" alias QuestionnaireResponse as source
|
||||
uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as target
|
||||
|
||||
group QuestionnaireResponse(source src : QuestionnaireResponse, target tgt : Patient) {
|
||||
src.item as item -> tgt as patient then item(item, patient);
|
||||
}
|
||||
|
||||
group item(source src, target tgt: Patient) {
|
||||
src.item as item where linkId.value in ('patient.sex') -> tgt.gender = (item.answer.valueString);
|
||||
}
|
||||
@ -1,8 +0,0 @@
|
||||
{
|
||||
"resourceType" : "Patient",
|
||||
"name" : [{
|
||||
"family" : "Brönnimann-Bertholet",
|
||||
"given" : ["Elisabeth"]
|
||||
}],
|
||||
"gender" : "female"
|
||||
}
|
||||
@ -1,26 +0,0 @@
|
||||
map "http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2pathumannameshared" = "qr2pathumannametwice"
|
||||
|
||||
uses "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse" alias QuestionnaireResponse as source
|
||||
uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as target
|
||||
|
||||
group entry(source src : QuestionnaireResponse, target tgt : Patient) {
|
||||
src.item as item then item(item, tgt);
|
||||
}
|
||||
|
||||
group item(source src, target tgt) {
|
||||
src.item as item then item(item, tgt);
|
||||
src.item as item where linkId.value = 'patient.lastname' -> tgt.name as name share patientName then humanNameFamily(item, name);
|
||||
src.item as item where linkId.value = 'patient.firstname' -> tgt.name as name share patientName then humanNameGiven(item, name);
|
||||
src.item as item where linkId.value = 'patient.sex' -> tgt.gender = (item.answer.valueString);
|
||||
}
|
||||
|
||||
group humanNameFamily(source src, target tgt: HumanName) {
|
||||
src.answer as answer -> tgt.family = (answer.valueString);
|
||||
}
|
||||
group humanNameGiven(source src, target tgt: HumanName) {
|
||||
src.answer as answer -> tgt.given = (answer.valueString);
|
||||
}
|
||||
|
||||
group administrativeGender(source src, target tgt: code) {
|
||||
src.answer as answer -> tgt = (answer.valueString);
|
||||
}
|
||||
@ -1,10 +0,0 @@
|
||||
{
|
||||
"resourceType" : "Patient",
|
||||
"name" : [{
|
||||
"family" : "Brönnimann-Bertholet"
|
||||
},
|
||||
{
|
||||
"given" : ["Elisabeth"]
|
||||
}],
|
||||
"gender" : "female"
|
||||
}
|
||||
@ -1,26 +0,0 @@
|
||||
map "http://github.com/hapifhir/org.hl7.fhir.core/org.hl7.fhir.r4.tests/qr2pathumannametwice" = "qr2pathumannametwice"
|
||||
|
||||
uses "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse" alias QuestionnaireResponse as source
|
||||
uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as target
|
||||
|
||||
group entry(source src : QuestionnaireResponse, target tgt : Patient) {
|
||||
src.item as item then item(item, tgt);
|
||||
}
|
||||
|
||||
group item(source src, target tgt) {
|
||||
src.item as item then item(item, tgt);
|
||||
src.item as item where linkId.value = 'patient.lastname' -> tgt.name as name then humanNameFamily(item, name);
|
||||
src.item as item where linkId.value = 'patient.firstname' -> tgt.name as name then humanNameGiven(item, name);
|
||||
src.item as item where linkId.value = 'patient.sex' -> tgt.gender = (item.answer.valueString);
|
||||
}
|
||||
|
||||
group humanNameFamily(source src, target tgt: HumanName) {
|
||||
src.answer as answer -> tgt.family = (answer.valueString);
|
||||
}
|
||||
group humanNameGiven(source src, target tgt: HumanName) {
|
||||
src.answer as answer -> tgt.given = (answer.valueString);
|
||||
}
|
||||
|
||||
group administrativeGender(source src, target tgt: code) {
|
||||
src.answer as answer -> tgt = (answer.valueString);
|
||||
}
|
||||
@ -1,16 +0,0 @@
|
||||
{
|
||||
"identifier":[{
|
||||
"system":"urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value":"12345"
|
||||
}],
|
||||
"active":true,
|
||||
"name":[{
|
||||
"given":["Peter","James"],
|
||||
"family":"Chalmers"
|
||||
},{
|
||||
"given":["Jim"]
|
||||
},{
|
||||
"given":["Peter","James"],
|
||||
"family":"Windsor"
|
||||
}]
|
||||
}
|
||||
@ -1,39 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
|
||||
<CodeSystem xmlns="http://hl7.org/fhir">
|
||||
<text>
|
||||
<status value="generated"/>
|
||||
<div xmlns="http://www.w3.org/1999/xhtml">
|
||||
<h2/>
|
||||
<p>This code system null defines the following codes:</p>
|
||||
<table class="codes">
|
||||
<tr>
|
||||
<td style="white-space:nowrap">
|
||||
<b>Code</b>
|
||||
</td>
|
||||
<td>
|
||||
<b>Display</b>
|
||||
</td>
|
||||
<td>
|
||||
<b>Definition</b>
|
||||
</td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td style="white-space:nowrap">125901
|
||||
<a name="null-125901"> </a>
|
||||
</td>
|
||||
<td>CARDIOsphere</td>
|
||||
<td>CARDIOsphere™ ultrasonic contrast agent produced by POINT Biomedical</td>
|
||||
</tr>
|
||||
</table>
|
||||
</div>
|
||||
</text>
|
||||
<status value="active"/>
|
||||
<caseSensitive value="true"/>
|
||||
<content value="complete"/>
|
||||
<concept>
|
||||
<code value="125901"/>
|
||||
<display value="CARDIOsphere"/>
|
||||
<definition value="CARDIOsphere™ ultrasonic contrast agent produced by POINT Biomedical"/>
|
||||
</concept>
|
||||
</CodeSystem>
|
||||
@ -1,18 +0,0 @@
|
||||
Patient(http://hl7.org/fhir/us/core/Patient) {
|
||||
managingOrganization cardinality 0..1 'description of item' :
|
||||
Organization(http://hl7.org/fhir/us/core/Organization) {
|
||||
endpoint : Endpoint
|
||||
};
|
||||
Basic;
|
||||
Group {
|
||||
item : Patient
|
||||
},
|
||||
generalPractitioner : Organization,
|
||||
search Observation?patient={ref} cardinality 0..10 'Observations for the patient' {
|
||||
performer : Practitioner,
|
||||
related.where(type='has-member').target : Observation require matching Patient,
|
||||
related.where(type='derived-from').target : Observation where identical Patient,
|
||||
related.where(type='sequel-to').target : Observation where different Patient,
|
||||
related.where(type='qualified-by').target : Observation where custom Patient = path
|
||||
}
|
||||
}
|
||||
@ -1,186 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<Bundle xmlns="http://hl7.org/fhir">
|
||||
<entry>
|
||||
<fullUrl value="http://hl7.org/fhir/test/Patient/example"/>
|
||||
<resource>
|
||||
<Patient>
|
||||
<id value="example"/>
|
||||
<text>
|
||||
<status value="generated"/>
|
||||
<div xmlns="http://www.w3.org/1999/xhtml">
|
||||
<table>
|
||||
<tbody>
|
||||
<tr>
|
||||
<td>Name</td>
|
||||
<td>Peter James
|
||||
<b>Chalmers</b>("Jim") </td> </tr>
|
||||
<tr>
|
||||
<td>Address</td>
|
||||
<td>534 Erewhon, Pleasantville, Vic, 3999</td> </tr>
|
||||
<tr>
|
||||
<td>Contacts</td>
|
||||
<td>Home: unknown. Work: (03) 5555 6473</td> </tr>
|
||||
<tr>
|
||||
<td>Id</td>
|
||||
<td>MRN: 12345 (Acme Healthcare)</td> </tr> </tbody> </table> </div>
|
||||
</text>
|
||||
<!--MRN assigned by ACME healthcare on 6-May 2001-->
|
||||
<identifier>
|
||||
<use value="usual"/>
|
||||
<type>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/v2-0203"/>
|
||||
<code value="MR"/>
|
||||
</coding>
|
||||
</type>
|
||||
<system value="urn:oid:1.2.36.146.595.217.0.1"/>
|
||||
<value value="12345"/>
|
||||
<period>
|
||||
<start value="2001-05-06"/>
|
||||
</period>
|
||||
<assigner>
|
||||
<display value="Acme Healthcare"/>
|
||||
</assigner>
|
||||
</identifier>
|
||||
<active value="true"/>
|
||||
<!--Peter James Chalmers, but called "Jim"-->
|
||||
<name>
|
||||
<use value="official"/>
|
||||
<family value="Chalmers"/>
|
||||
<given value="Peter"/>
|
||||
<given value="James"/>
|
||||
</name>
|
||||
<name>
|
||||
<use value="usual"/>
|
||||
<given value="Jim"/>
|
||||
</name>
|
||||
<name>
|
||||
<!--Maiden names apply for anyone whose name changes as a result of marriage - irrespective of gender-->
|
||||
<use value="maiden"/>
|
||||
<family value="Windsor"/>
|
||||
<given value="Peter"/>
|
||||
<given value="James"/>
|
||||
<period>
|
||||
<end value="2002"/>
|
||||
</period>
|
||||
</name>
|
||||
<telecom>
|
||||
<use value="home"/>
|
||||
<!--home communication details aren't known-->
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="(03) 5555 6473"/>
|
||||
<use value="work"/>
|
||||
<rank value="1"/>
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="(03) 3410 5613"/>
|
||||
<use value="mobile"/>
|
||||
<rank value="2"/>
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="(03) 5555 8834"/>
|
||||
<use value="old"/>
|
||||
<period>
|
||||
<end value="2014"/>
|
||||
</period>
|
||||
</telecom>
|
||||
<!--use FHIR code system for male / female-->
|
||||
<gender value="male"/>
|
||||
<birthDate value="1974-12-25">
|
||||
<extension url="http://hl7.org/fhir/StructureDefinition/patient-birthTime">
|
||||
<valueDateTime value="1974-12-25T14:35:45-05:00"/>
|
||||
</extension>
|
||||
</birthDate>
|
||||
<deceasedBoolean value="false"/>
|
||||
<address>
|
||||
<use value="home"/>
|
||||
<type value="both"/>
|
||||
<text value="534 Erewhon St PeasantVille, Rainbow, Vic 3999"/>
|
||||
<line value="534 Erewhon St"/>
|
||||
<city value="PleasantVille"/>
|
||||
<district value="Rainbow"/>
|
||||
<state value="Vic"/>
|
||||
<postalCode value="3999"/>
|
||||
<period>
|
||||
<start value="1974-12-25"/>
|
||||
</period>
|
||||
</address>
|
||||
<contact>
|
||||
<relationship>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/v2-0131"/>
|
||||
<code value="N"/>
|
||||
</coding>
|
||||
</relationship>
|
||||
<name>
|
||||
<family value="du Marché">
|
||||
<!--the "du" part is a family name prefix (VV in iso 21090)-->
|
||||
<extension url="http://hl7.org/fhir/StructureDefinition/humanname-own-prefix">
|
||||
<valueString value="VV"/>
|
||||
</extension>
|
||||
</family>
|
||||
<given value="Bénédicte"/>
|
||||
</name>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="+33 (237) 998327"/>
|
||||
</telecom>
|
||||
<address>
|
||||
<use value="home"/>
|
||||
<type value="both"/>
|
||||
<line value="534 Erewhon St"/>
|
||||
<city value="PleasantVille"/>
|
||||
<district value="Rainbow"/>
|
||||
<state value="Vic"/>
|
||||
<postalCode value="3999"/>
|
||||
<period>
|
||||
<start value="1974-12-25"/>
|
||||
</period>
|
||||
</address>
|
||||
<gender value="female"/>
|
||||
<period>
|
||||
<!--The contact relationship started in 2012-->
|
||||
<start value="2012"/>
|
||||
</period>
|
||||
</contact>
|
||||
<managingOrganization>
|
||||
<reference value="Organization/1"/>
|
||||
</managingOrganization>
|
||||
</Patient>
|
||||
</resource>
|
||||
</entry>
|
||||
<entry>
|
||||
<fullUrl value="http://hl7.org/fhir/test/Organization/1"/>
|
||||
<resource>
|
||||
<Organization>
|
||||
<id value="1"/>
|
||||
<text>
|
||||
<status value="generated"/>
|
||||
<div xmlns="http://www.w3.org/1999/xhtml">
|
||||
<p>Gastroenterology @ Acme Hospital. ph: +1 555 234 3523, email:
|
||||
<a href="mailto:gastro@acme.org">gastro@acme.org</a> </p> </div>
|
||||
</text>
|
||||
<!--Clinical Team "Gastroenterology" at Acme Hospital-->
|
||||
<identifier>
|
||||
<system value="http://www.acme.org.au/units"/>
|
||||
<value value="Gastro"/>
|
||||
</identifier>
|
||||
<name value="Gastroenterology"/>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="+1 555 234 3523"/>
|
||||
<use value="mobile"/>
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="email"/>
|
||||
<value value="gastro@acme.org"/>
|
||||
<use value="work"/>
|
||||
</telecom>
|
||||
</Organization>
|
||||
</resource>
|
||||
</entry>
|
||||
</Bundle>
|
||||
@ -1,9 +0,0 @@
|
||||
<graphdef-tests>
|
||||
<test name="simple" source="simple.gdl" context="Patient/example/$graph">
|
||||
<rule description="Must be 2 resources in the bundle" expression="Bundle.entry.count() = 2"/>
|
||||
</test>
|
||||
<test name="full-syntax" source="full-syntax.gdl" context="Patient/example/$graph">
|
||||
<rule description="Must be 2 resources in the bundle" expression="Bundle.entry.count() = 2"/>
|
||||
</test>
|
||||
|
||||
</graphdef-tests>
|
||||
@ -1 +0,0 @@
|
||||
Patient{managingOrganization:Organization{endpoint:Endpoint}}
|
||||
@ -1,186 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<Bundle xmlns="http://hl7.org/fhir">
|
||||
<entry>
|
||||
<fullUrl value="http://hl7.org/fhir/test/Patient/example"/>
|
||||
<resource>
|
||||
<Patient>
|
||||
<id value="example"/>
|
||||
<text>
|
||||
<status value="generated"/>
|
||||
<div xmlns="http://www.w3.org/1999/xhtml">
|
||||
<table>
|
||||
<tbody>
|
||||
<tr>
|
||||
<td>Name</td>
|
||||
<td>Peter James
|
||||
<b>Chalmers</b>("Jim") </td> </tr>
|
||||
<tr>
|
||||
<td>Address</td>
|
||||
<td>534 Erewhon, Pleasantville, Vic, 3999</td> </tr>
|
||||
<tr>
|
||||
<td>Contacts</td>
|
||||
<td>Home: unknown. Work: (03) 5555 6473</td> </tr>
|
||||
<tr>
|
||||
<td>Id</td>
|
||||
<td>MRN: 12345 (Acme Healthcare)</td> </tr> </tbody> </table> </div>
|
||||
</text>
|
||||
<!--MRN assigned by ACME healthcare on 6-May 2001-->
|
||||
<identifier>
|
||||
<use value="usual"/>
|
||||
<type>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/v2-0203"/>
|
||||
<code value="MR"/>
|
||||
</coding>
|
||||
</type>
|
||||
<system value="urn:oid:1.2.36.146.595.217.0.1"/>
|
||||
<value value="12345"/>
|
||||
<period>
|
||||
<start value="2001-05-06"/>
|
||||
</period>
|
||||
<assigner>
|
||||
<display value="Acme Healthcare"/>
|
||||
</assigner>
|
||||
</identifier>
|
||||
<active value="true"/>
|
||||
<!--Peter James Chalmers, but called "Jim"-->
|
||||
<name>
|
||||
<use value="official"/>
|
||||
<family value="Chalmers"/>
|
||||
<given value="Peter"/>
|
||||
<given value="James"/>
|
||||
</name>
|
||||
<name>
|
||||
<use value="usual"/>
|
||||
<given value="Jim"/>
|
||||
</name>
|
||||
<name>
|
||||
<!--Maiden names apply for anyone whose name changes as a result of marriage - irrespective of gender-->
|
||||
<use value="maiden"/>
|
||||
<family value="Windsor"/>
|
||||
<given value="Peter"/>
|
||||
<given value="James"/>
|
||||
<period>
|
||||
<end value="2002"/>
|
||||
</period>
|
||||
</name>
|
||||
<telecom>
|
||||
<use value="home"/>
|
||||
<!--home communication details aren't known-->
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="(03) 5555 6473"/>
|
||||
<use value="work"/>
|
||||
<rank value="1"/>
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="(03) 3410 5613"/>
|
||||
<use value="mobile"/>
|
||||
<rank value="2"/>
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="(03) 5555 8834"/>
|
||||
<use value="old"/>
|
||||
<period>
|
||||
<end value="2014"/>
|
||||
</period>
|
||||
</telecom>
|
||||
<!--use FHIR code system for male / female-->
|
||||
<gender value="male"/>
|
||||
<birthDate value="1974-12-25">
|
||||
<extension url="http://hl7.org/fhir/StructureDefinition/patient-birthTime">
|
||||
<valueDateTime value="1974-12-25T14:35:45-05:00"/>
|
||||
</extension>
|
||||
</birthDate>
|
||||
<deceasedBoolean value="false"/>
|
||||
<address>
|
||||
<use value="home"/>
|
||||
<type value="both"/>
|
||||
<text value="534 Erewhon St PeasantVille, Rainbow, Vic 3999"/>
|
||||
<line value="534 Erewhon St"/>
|
||||
<city value="PleasantVille"/>
|
||||
<district value="Rainbow"/>
|
||||
<state value="Vic"/>
|
||||
<postalCode value="3999"/>
|
||||
<period>
|
||||
<start value="1974-12-25"/>
|
||||
</period>
|
||||
</address>
|
||||
<contact>
|
||||
<relationship>
|
||||
<coding>
|
||||
<system value="http://terminology.hl7.org/CodeSystem/v2-0131"/>
|
||||
<code value="N"/>
|
||||
</coding>
|
||||
</relationship>
|
||||
<name>
|
||||
<family value="du Marché">
|
||||
<!--the "du" part is a family name prefix (VV in iso 21090)-->
|
||||
<extension url="http://hl7.org/fhir/StructureDefinition/humanname-own-prefix">
|
||||
<valueString value="VV"/>
|
||||
</extension>
|
||||
</family>
|
||||
<given value="Bénédicte"/>
|
||||
</name>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="+33 (237) 998327"/>
|
||||
</telecom>
|
||||
<address>
|
||||
<use value="home"/>
|
||||
<type value="both"/>
|
||||
<line value="534 Erewhon St"/>
|
||||
<city value="PleasantVille"/>
|
||||
<district value="Rainbow"/>
|
||||
<state value="Vic"/>
|
||||
<postalCode value="3999"/>
|
||||
<period>
|
||||
<start value="1974-12-25"/>
|
||||
</period>
|
||||
</address>
|
||||
<gender value="female"/>
|
||||
<period>
|
||||
<!--The contact relationship started in 2012-->
|
||||
<start value="2012"/>
|
||||
</period>
|
||||
</contact>
|
||||
<managingOrganization>
|
||||
<reference value="Organization/1"/>
|
||||
</managingOrganization>
|
||||
</Patient>
|
||||
</resource>
|
||||
</entry>
|
||||
<entry>
|
||||
<fullUrl value="http://hl7.org/fhir/test/Organization/1"/>
|
||||
<resource>
|
||||
<Organization>
|
||||
<id value="1"/>
|
||||
<text>
|
||||
<status value="generated"/>
|
||||
<div xmlns="http://www.w3.org/1999/xhtml">
|
||||
<p>Gastroenterology @ Acme Hospital. ph: +1 555 234 3523, email:
|
||||
<a href="mailto:gastro@acme.org">gastro@acme.org</a> </p> </div>
|
||||
</text>
|
||||
<!--Clinical Team "Gastroenterology" at Acme Hospital-->
|
||||
<identifier>
|
||||
<system value="http://www.acme.org.au/units"/>
|
||||
<value value="Gastro"/>
|
||||
</identifier>
|
||||
<name value="Gastroenterology"/>
|
||||
<telecom>
|
||||
<system value="phone"/>
|
||||
<value value="+1 555 234 3523"/>
|
||||
<use value="mobile"/>
|
||||
</telecom>
|
||||
<telecom>
|
||||
<system value="email"/>
|
||||
<value value="gastro@acme.org"/>
|
||||
<use value="work"/>
|
||||
</telecom>
|
||||
</Organization>
|
||||
</resource>
|
||||
</entry>
|
||||
</Bundle>
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @include(if: true) { system value }
|
||||
active
|
||||
name { text given family }
|
||||
}
|
||||
@ -1,16 +0,0 @@
|
||||
{
|
||||
"identifier": [{
|
||||
"system": "urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value": "12345"
|
||||
}],
|
||||
"active": true,
|
||||
"name": [{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Chalmers"
|
||||
},{
|
||||
"given": ["Jim"]
|
||||
},{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Windsor"
|
||||
}]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @skip(if: true) { system value }
|
||||
active
|
||||
name { text given family }
|
||||
}
|
||||
@ -1,12 +0,0 @@
|
||||
{
|
||||
"active": true,
|
||||
"name": [{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Chalmers"
|
||||
},{
|
||||
"given": ["Jim"]
|
||||
},{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Windsor"
|
||||
}]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
query test($var : Boolean) {
|
||||
identifier @include(if: $var) { system value }
|
||||
active
|
||||
name { text given family }
|
||||
}
|
||||
@ -1,16 +0,0 @@
|
||||
{
|
||||
"identifier": [{
|
||||
"system": "urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value": "12345"
|
||||
}],
|
||||
"active": true,
|
||||
"name": [{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Chalmers"
|
||||
},{
|
||||
"given": ["Jim"]
|
||||
},{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Windsor"
|
||||
}]
|
||||
}
|
||||
@ -1,4 +0,0 @@
|
||||
{
|
||||
id
|
||||
extension(url : "http://example.org/StructureDefinition/trials") { url, valueCode }
|
||||
}
|
||||
@ -1,9 +0,0 @@
|
||||
{
|
||||
"id": "glossy",
|
||||
"extension": [
|
||||
{
|
||||
"url": "http://example.org/StructureDefinition/trials",
|
||||
"valueCode": "renal"
|
||||
}
|
||||
]
|
||||
}
|
||||
@ -1,4 +0,0 @@
|
||||
{
|
||||
id
|
||||
extension(url : "http://example.org/StructureDefinition/trialsX") { url, valueCode }
|
||||
}
|
||||
@ -1,3 +0,0 @@
|
||||
{
|
||||
"id": "glossy"
|
||||
}
|
||||
@ -1,4 +0,0 @@
|
||||
{
|
||||
id
|
||||
extension { url, valueCode }
|
||||
}
|
||||
@ -1,9 +0,0 @@
|
||||
{
|
||||
"id": "glossy",
|
||||
"extension": [
|
||||
{
|
||||
"url": "http://example.org/StructureDefinition/trials",
|
||||
"valueCode": "renal"
|
||||
}
|
||||
]
|
||||
}
|
||||
@ -1,4 +0,0 @@
|
||||
{
|
||||
subject { resource { birthDate } }
|
||||
subject { resource { _birthDate { extension {valueDateTime} } } }
|
||||
}
|
||||
@ -1,15 +0,0 @@
|
||||
{
|
||||
"subject": [{
|
||||
"resource": {
|
||||
"birthDate": "2016-05-18"
|
||||
}
|
||||
},{
|
||||
"resource": {
|
||||
"_birthDate": {
|
||||
"extension":[{
|
||||
"valueDateTime": "2016-05-18T10:28:45Z"
|
||||
}]
|
||||
}
|
||||
}
|
||||
}]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier { system value }
|
||||
active
|
||||
name(fhirpath: "family.exists()") { text given family }
|
||||
}
|
||||
@ -1,14 +0,0 @@
|
||||
{
|
||||
"identifier": [{
|
||||
"system": "urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value": "12345"
|
||||
}],
|
||||
"active": true,
|
||||
"name": [{
|
||||
"given": ["Peter","James"],
|
||||
"family": "Chalmers"
|
||||
},{
|
||||
"given":["Peter","James"],
|
||||
"family":"Windsor"
|
||||
}]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system value }
|
||||
active
|
||||
name @flatten { text given @first family }
|
||||
}
|
||||
@ -1,7 +0,0 @@
|
||||
{
|
||||
"system":["urn:oid:1.2.36.146.595.217.0.1"],
|
||||
"value":["12345"],
|
||||
"active":true,
|
||||
"given":["Peter","Jim","Peter"],
|
||||
"family":["Chalmers","Windsor"]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system @singleton value @singleton }
|
||||
active
|
||||
name @flatten { text given family }
|
||||
}
|
||||
@ -1,7 +0,0 @@
|
||||
{
|
||||
"system":"urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value":"12345",
|
||||
"active":true,
|
||||
"given":["Peter","James","Jim","Peter","James"],
|
||||
"family":["Chalmers","Windsor"]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system @singleton value @singleton }
|
||||
active
|
||||
name @flatten { text given family @singleton }
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system @singleton value @singleton }
|
||||
active
|
||||
name @flatten @first { text given family @singleton }
|
||||
}
|
||||
@ -1,7 +0,0 @@
|
||||
{
|
||||
"system":"urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value":"12345",
|
||||
"active":true,
|
||||
"given":["Peter","James"],
|
||||
"family":"Chalmers"
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system value }
|
||||
active
|
||||
name @flatten @slice(path: "use") { given family @singleton }
|
||||
}
|
||||
@ -1,10 +0,0 @@
|
||||
{
|
||||
"system":["urn:oid:1.2.36.146.595.217.0.1"],
|
||||
"value":["12345"],
|
||||
"active":true,
|
||||
"given.official":["Peter","James"],
|
||||
"family.official":"Chalmers",
|
||||
"given.usual":["Jim"],
|
||||
"given.maiden":["Peter","James"],
|
||||
"family.maiden":"Windsor"
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system value }
|
||||
active
|
||||
name @flatten @slice(path: "$index") { given family @singleton }
|
||||
}
|
||||
@ -1,10 +0,0 @@
|
||||
{
|
||||
"system":["urn:oid:1.2.36.146.595.217.0.1"],
|
||||
"value":["12345"],
|
||||
"active":true,
|
||||
"given.0":["Peter","James"],
|
||||
"family.0":"Chalmers",
|
||||
"given.1":["Jim"],
|
||||
"given.2":["Peter","James"],
|
||||
"family.2":"Windsor"
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
identifier @flatten { system value }
|
||||
active
|
||||
name @flatten { text given family }
|
||||
}
|
||||
@ -1,7 +0,0 @@
|
||||
{
|
||||
"system":["urn:oid:1.2.36.146.595.217.0.1"],
|
||||
"value":["12345"],
|
||||
"active":true,
|
||||
"given":["Peter","James","Jim","Peter","James"],
|
||||
"family":["Chalmers","Windsor"]
|
||||
}
|
||||
@ -1,3 +0,0 @@
|
||||
{
|
||||
entry(_count: 5, _offset: 5) { deleted item { reference } }
|
||||
}
|
||||
@ -1,29 +0,0 @@
|
||||
{
|
||||
"entry": [
|
||||
{
|
||||
"item": {
|
||||
"reference": "Patient/1"
|
||||
}
|
||||
},
|
||||
{
|
||||
"item": {
|
||||
"reference": "Patient/2"
|
||||
}
|
||||
},
|
||||
{
|
||||
"item": {
|
||||
"reference": "Patient/3"
|
||||
}
|
||||
},
|
||||
{
|
||||
"item": {
|
||||
"reference": "Patient/4"
|
||||
}
|
||||
},
|
||||
{
|
||||
"item": {
|
||||
"reference": "Patient/5"
|
||||
}
|
||||
}
|
||||
]
|
||||
}
|
||||
@ -1,31 +0,0 @@
|
||||
<graphql-tests>
|
||||
<test name="simple" source="simple.gql" output="simple.json" context="Patient/example/$graphql"/>
|
||||
<test name="filter-fhirpath" source="filter-fhirpath.gql" output="filter-fhirpath.json" context="Patient/example/$graphql"/>
|
||||
<test name="using wrong field" source="wrong-field.gql" output="$error" context="Patient/example/$graphql"/>
|
||||
<test name="polymorphic" source="polymorphic.gql" output="polymorphic.json" context="Observation/example/$graphql"/>
|
||||
<test name="reference" source="reference.gql" output="reference.json" context="Observation/example/$graphql"/>
|
||||
<test name="reference-type-in" source="reference-type-in.gql" output="reference-type-in.json" context="Observation/example/$graphql"/>
|
||||
<test name="reference-type-out" source="reference-type-out.gql" output="reference-type-out.json" context="Observation/example/$graphql"/>
|
||||
<test name="reference-broken" source="reference-broken.gql" output="$error" context="MedicationDispense/meddisp008/$graphql" resource="medicationdispenseexample8"/>
|
||||
<test name="reference-optional" source="reference-optional.gql" output="reference-optional.json" context="MedicationDispense/meddisp008/$graphql" resource="medicationdispenseexample8"/>
|
||||
<test name="reference-fragment-type" source="reference-fragment-type.gql" output="reference-fragment-type.json" context="Observation/example/$graphql"/>
|
||||
<test name="extension-complex" source="extension-complex.gql" output="extension-complex.json" context="Patient/glossy/$graphql" resource="patient-glossy-example"/>
|
||||
<test name="extension-complex-in" source="extension-complex-in.gql" output="extension-complex-in.json" context="Patient/glossy/$graphql" resource="patient-glossy-example"/>
|
||||
<test name="extension-complex-out" source="extension-complex-out.gql" output="extension-complex-out.json" context="Patient/glossy/$graphql" resource="patient-glossy-example"/>
|
||||
<test name="extension-simple" source="extension-simple.gql" output="extension-simple.json" context="Observation/20minute-apgar-score/$graphql" resource="observation-example-20minute-apgar-score"/>
|
||||
<test name="search-single" source="search-single.gql" output="search-single.json" context=""/>
|
||||
<test name="search-simple" source="search-simple.gql" output="search-simple.json" context=""/>
|
||||
<test name="search-full" source="search-full.gql" output="search-full.json" context=""/>
|
||||
<test name="reference-reverse" source="reference-reverse.gql" output="reference-reverse.json" context="Patient/example/$graphql"/>
|
||||
<test name="directive-skip" source="directive-skip.gql" output="directive-skip.json" context="Patient/example/$graphql"/>
|
||||
<test name="directive-include" source="directive-include.gql" output="directive-include.json" context="Patient/example/$graphql"/>
|
||||
<test name="directive-variable" source="directive-variable.gql" output="directive-variable.json" context="Patient/example/$graphql" operation="test"/>
|
||||
<test name="flatten" source="flatten.gql" output="flatten.json" context="Patient/example/$graphql"/>
|
||||
<test name="flatten-first" source="flatten-first.gql" output="flatten-first.json" context="Patient/example/$graphql"/>
|
||||
<test name="flatten-singleton1" source="flatten-singleton1.gql" output="flatten-singleton1.json" context="Patient/example/$graphql"/>
|
||||
<test name="flatten-singleton2" source="flatten-singleton2.gql" output="$error" context="Patient/example/$graphql"/>
|
||||
<test name="flatten-singleton3" source="flatten-singleton3.gql" output="flatten-singleton3.json" context="Patient/example/$graphql"/>
|
||||
<test name="flatten-slice1" source="flatten-slice1.gql" output="flatten-slice1.json" context="Patient/example/$graphql"/>
|
||||
<test name="flatten-slice2" source="flatten-slice2.gql" output="flatten-slice2.json" context="Patient/example/$graphql"/>
|
||||
<test name="list-sub" source="list-sub.gql" output="list-sub.json" context="List/example-long/$graphql"/>
|
||||
</graphql-tests>
|
||||
@ -1,329 +0,0 @@
|
||||
#### SelectionSet
|
||||
|
||||
|
||||
{
|
||||
id
|
||||
firstName
|
||||
lastName
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Short
|
||||
|
||||
|
||||
{
|
||||
field
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Simple
|
||||
|
||||
|
||||
{
|
||||
user(id: 4) {
|
||||
name
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### User
|
||||
|
||||
|
||||
# `user` represents one of many users in a graph of data, referred to by a
|
||||
# unique identifier.
|
||||
{
|
||||
user(id: 4) {
|
||||
name
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Variable
|
||||
|
||||
|
||||
query getZuckProfile($devicePicSize: Int) {
|
||||
user(id: 4) {
|
||||
id
|
||||
name
|
||||
profilePic(size: $devicePicSize)
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Alias1
|
||||
|
||||
|
||||
{
|
||||
user(id: 4) {
|
||||
id
|
||||
name
|
||||
smallPic: profilePic(size: 64)
|
||||
bigPic: profilePic(size: 1024)
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Alias2
|
||||
|
||||
|
||||
{
|
||||
zuck: user(id: 4) {
|
||||
id
|
||||
name
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Arguments1
|
||||
|
||||
|
||||
{
|
||||
user(id: 4) {
|
||||
id
|
||||
name
|
||||
profilePic(size: 100)
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Arguments2
|
||||
|
||||
|
||||
{
|
||||
user(id: 4) {
|
||||
id
|
||||
name
|
||||
profilePic(width: 100, height: 50)
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Arguments3
|
||||
|
||||
|
||||
{
|
||||
picture(width: 200, height: 100)
|
||||
}
|
||||
|
||||
|
||||
#### Arguments4
|
||||
|
||||
|
||||
{
|
||||
picture(height: 100, width: 200)
|
||||
}
|
||||
|
||||
|
||||
#### Comment
|
||||
|
||||
|
||||
{
|
||||
# this
|
||||
user(id: 4) {
|
||||
name
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Fragments0
|
||||
|
||||
|
||||
query noFragments {
|
||||
user(id: 4) {
|
||||
friends(first: 10) {
|
||||
id
|
||||
name
|
||||
profilePic(size: 50)
|
||||
}
|
||||
mutualFriends(first: 10) {
|
||||
id
|
||||
name
|
||||
profilePic(size: 50)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Fragments1
|
||||
|
||||
|
||||
query withFragments {
|
||||
user(id: 4) {
|
||||
friends(first: 10) {
|
||||
...friendFields
|
||||
}
|
||||
mutualFriends(first: 10) {
|
||||
...friendFields
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
fragment friendFields on User {
|
||||
id
|
||||
name
|
||||
profilePic(size: 50)
|
||||
}
|
||||
|
||||
|
||||
#### Fragments2
|
||||
|
||||
|
||||
query withNestedFragments {
|
||||
user(id: 4) {
|
||||
friends(first: 10) {
|
||||
...friendFields
|
||||
}
|
||||
mutualFriends(first: 10) {
|
||||
...friendFields
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
fragment friendFields on User {
|
||||
id
|
||||
name
|
||||
...standardProfilePic
|
||||
}
|
||||
|
||||
fragment standardProfilePic on User {
|
||||
profilePic(size: 50)
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Fragments3
|
||||
|
||||
|
||||
query FragmentTyping {
|
||||
profiles(handles: ["zuck", "cocacola"]) {
|
||||
handle
|
||||
...userFragment
|
||||
...pageFragment
|
||||
}
|
||||
}
|
||||
|
||||
fragment userFragment on User {
|
||||
friends {
|
||||
count
|
||||
}
|
||||
}
|
||||
|
||||
fragment pageFragment on Page {
|
||||
likers {
|
||||
count
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Fragments4
|
||||
|
||||
|
||||
query inlineFragmentTyping {
|
||||
profiles(handles: ["zuck", "cocacola"]) {
|
||||
handle
|
||||
... on User {
|
||||
friends {
|
||||
count
|
||||
}
|
||||
}
|
||||
... on Page {
|
||||
likers {
|
||||
count
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Fragments5
|
||||
|
||||
|
||||
query inlineFragmentNoType($expandedInfo: Boolean) {
|
||||
user(handle: "zuck") {
|
||||
id
|
||||
name
|
||||
... @include(if: $expandedInfo) {
|
||||
firstName
|
||||
lastName
|
||||
birthday
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
#### Me
|
||||
|
||||
|
||||
# `me` could represent the currently logged in viewer.
|
||||
{
|
||||
me {
|
||||
name
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Mutation
|
||||
|
||||
|
||||
mutation {
|
||||
likeStory(storyID: 12345) {
|
||||
story {
|
||||
likeCount
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Nested
|
||||
|
||||
|
||||
{
|
||||
me {
|
||||
id
|
||||
firstName
|
||||
lastName
|
||||
birthday {
|
||||
month
|
||||
day
|
||||
}
|
||||
friends {
|
||||
name
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Object1
|
||||
|
||||
|
||||
{
|
||||
nearestThing(location: { lon: 12.43, lat: -53.211 })
|
||||
}
|
||||
|
||||
|
||||
|
||||
#### Object2
|
||||
|
||||
|
||||
{
|
||||
nearestThing(location: { lat: -53.211, lon: 12.43 })
|
||||
}
|
||||
|
||||
|
||||
#### EmptyParamList
|
||||
|
||||
|
||||
{
|
||||
user() {
|
||||
name
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
subject{reference}
|
||||
valueQuantity {value unit}
|
||||
}
|
||||
|
||||
@ -1,9 +0,0 @@
|
||||
{
|
||||
"subject" : {
|
||||
"reference" : "Patient/example"
|
||||
},
|
||||
"valueQuantity": {
|
||||
"value": 185,
|
||||
"unit": "lbs"
|
||||
}
|
||||
}
|
||||
@ -1,6 +0,0 @@
|
||||
{
|
||||
# this is broken because the reference on the given example doesn't
|
||||
# follow the normal naming pattern that the resource resolver
|
||||
# knows how to resolve
|
||||
authorizingPrescription { reference, resource {id} }
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
id
|
||||
subject { reference, resource { ...on Patient {active} } }
|
||||
code {coding {system code} }
|
||||
}
|
||||
@ -1,24 +0,0 @@
|
||||
{
|
||||
"id" : "example",
|
||||
"subject" : {
|
||||
"reference" : "Patient/example",
|
||||
"resource" : {
|
||||
"active": true
|
||||
}
|
||||
},
|
||||
"code": {
|
||||
"coding": [{
|
||||
"system": "http://loinc.org",
|
||||
"code": "29463-7"
|
||||
},{
|
||||
"system": "http://loinc.org",
|
||||
"code": "3141-9"
|
||||
},{
|
||||
"system": "http://snomed.info/sct",
|
||||
"code": "27113001"
|
||||
},{
|
||||
"system": "http://acme.org/devices/clinical-codes",
|
||||
"code": "body-weight"
|
||||
}]
|
||||
}
|
||||
}
|
||||
@ -1,6 +0,0 @@
|
||||
{
|
||||
# this is broken because the reference on the given example doesn't
|
||||
# follow the normal naming pattern that the resource resolver
|
||||
# knows how to resolve
|
||||
authorizingPrescription { reference, resource(optional : true) {id} }
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
"authorizingPrescription" : [{
|
||||
"reference" : "MedicationRequest/medrx0330"
|
||||
}]
|
||||
}
|
||||
@ -1,6 +0,0 @@
|
||||
{
|
||||
id
|
||||
ConditionList(_reference: patient) {
|
||||
id
|
||||
}
|
||||
}
|
||||
@ -1,6 +0,0 @@
|
||||
{
|
||||
"id" : "example",
|
||||
"ConditionList":[{
|
||||
"id":"example"
|
||||
}]
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
id
|
||||
subject { reference, resource(type : Patient) {active} }
|
||||
code {coding {system code} }
|
||||
}
|
||||
@ -1,24 +0,0 @@
|
||||
{
|
||||
"id" : "example",
|
||||
"subject" : {
|
||||
"reference" : "Patient/example",
|
||||
"resource" : {
|
||||
"active": true
|
||||
}
|
||||
},
|
||||
"code": {
|
||||
"coding": [{
|
||||
"system": "http://loinc.org",
|
||||
"code": "29463-7"
|
||||
},{
|
||||
"system": "http://loinc.org",
|
||||
"code": "3141-9"
|
||||
},{
|
||||
"system": "http://snomed.info/sct",
|
||||
"code": "27113001"
|
||||
},{
|
||||
"system": "http://acme.org/devices/clinical-codes",
|
||||
"code": "body-weight"
|
||||
}]
|
||||
}
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
id
|
||||
subject { reference, resource(type : Group) {active} }
|
||||
code {coding {system code} }
|
||||
}
|
||||
@ -1,21 +0,0 @@
|
||||
{
|
||||
"id" : "example",
|
||||
"subject" : {
|
||||
"reference" : "Patient/example"
|
||||
},
|
||||
"code": {
|
||||
"coding": [{
|
||||
"system": "http://loinc.org",
|
||||
"code": "29463-7"
|
||||
},{
|
||||
"system": "http://loinc.org",
|
||||
"code": "3141-9"
|
||||
},{
|
||||
"system": "http://snomed.info/sct",
|
||||
"code": "27113001"
|
||||
},{
|
||||
"system": "http://acme.org/devices/clinical-codes",
|
||||
"code": "body-weight"
|
||||
}]
|
||||
}
|
||||
}
|
||||
@ -1,5 +0,0 @@
|
||||
{
|
||||
id
|
||||
subject { reference, resource {active} }
|
||||
code {coding {system code} }
|
||||
}
|
||||
@ -1,24 +0,0 @@
|
||||
{
|
||||
"id" : "example",
|
||||
"subject" : {
|
||||
"reference" : "Patient/example",
|
||||
"resource" : {
|
||||
"active": true
|
||||
}
|
||||
},
|
||||
"code": {
|
||||
"coding": [{
|
||||
"system": "http://loinc.org",
|
||||
"code": "29463-7"
|
||||
},{
|
||||
"system": "http://loinc.org",
|
||||
"code": "3141-9"
|
||||
},{
|
||||
"system": "http://snomed.info/sct",
|
||||
"code": "27113001"
|
||||
},{
|
||||
"system": "http://acme.org/devices/clinical-codes",
|
||||
"code": "body-weight"
|
||||
}]
|
||||
}
|
||||
}
|
||||
@ -1,9 +0,0 @@
|
||||
{
|
||||
PatientConnection (active : true) {
|
||||
count offset pagesize
|
||||
edges {
|
||||
mode, score, resource { id, active }
|
||||
}
|
||||
first previous next last
|
||||
}
|
||||
}
|
||||
@ -1,21 +0,0 @@
|
||||
{
|
||||
"PatientConnection":{
|
||||
"count":50,
|
||||
"offset":0,
|
||||
"pagesize":50,
|
||||
"edges":[{
|
||||
"resource":{
|
||||
"id" : "example",
|
||||
"active" : true
|
||||
}
|
||||
},{
|
||||
"mode":"match",
|
||||
"score":0.5,
|
||||
"resource":{
|
||||
"id":"xds",
|
||||
"active":true
|
||||
}
|
||||
}],
|
||||
"next":"77c97e03-8a6c-415f-a63d-11c80cf73f:50"
|
||||
}
|
||||
}
|
||||
@ -1,3 +0,0 @@
|
||||
{
|
||||
PatientList(active : true) { id, active }
|
||||
}
|
||||
@ -1,9 +0,0 @@
|
||||
{
|
||||
"PatientList":[{
|
||||
"id" : "example",
|
||||
"active" : true
|
||||
},{
|
||||
"id":"xds",
|
||||
"active":true
|
||||
}]
|
||||
}
|
||||
@ -1,3 +0,0 @@
|
||||
{
|
||||
Patient(id: example) { id, active }
|
||||
}
|
||||
@ -1,6 +0,0 @@
|
||||
{
|
||||
"Patient" : {
|
||||
"id" : "example",
|
||||
"active" : true
|
||||
}
|
||||
}
|
||||
@ -1,81 +0,0 @@
|
||||
{
|
||||
"@type" : "graphql-server-tests",
|
||||
"instance-tests" : {
|
||||
"simple" : {
|
||||
"description" : "Just a simple test of the basic graphQL engine: a simple query on a known patient (example, from the spec)",
|
||||
"url" : "/Patient/example/$graphql?query={identifier{system,value}active,name{text,given,family}}",
|
||||
"output" : {
|
||||
"data" : {
|
||||
"active" : true,
|
||||
"identifier" : [
|
||||
{
|
||||
"system" : "urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value" : "12345"
|
||||
}
|
||||
],
|
||||
"name" : [
|
||||
{
|
||||
"family" : "Chalmers",
|
||||
"given" : [
|
||||
"Peter",
|
||||
"James"
|
||||
]
|
||||
},
|
||||
{
|
||||
"given" : [
|
||||
"Jim"
|
||||
]
|
||||
},
|
||||
{
|
||||
"family" : "Windsor",
|
||||
"given" : [
|
||||
"Peter",
|
||||
"James"
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
}
|
||||
}
|
||||
},
|
||||
"root-tests" : {
|
||||
"simple" : {
|
||||
"description" : "Just a simple test of the basic graphQL engine: a simple query on a known patient (example, from the spec)",
|
||||
"url" : "/$graphql?query={Patient(_id:\"example\"){identifier{system,value}active,name{text,given,family}}}",
|
||||
"output" : {
|
||||
"data" : {
|
||||
"Patient" : {
|
||||
"active" : true,
|
||||
"identifier" : [
|
||||
{
|
||||
"system" : "urn:oid:1.2.36.146.595.217.0.1",
|
||||
"value" : "12345"
|
||||
}
|
||||
],
|
||||
"name" : [
|
||||
{
|
||||
"family" : "Chalmers",
|
||||
"given" : [
|
||||
"Peter",
|
||||
"James"
|
||||
]
|
||||
},
|
||||
{
|
||||
"given" : [
|
||||
"Jim"
|
||||
]
|
||||
},
|
||||
{
|
||||
"family" : "Windsor",
|
||||
"given" : [
|
||||
"Peter",
|
||||
"James"
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
Some files were not shown because too many files have changed in this diff Show More
Loading…
x
Reference in New Issue
Block a user