Commit Graph

1011 Commits

Author SHA1 Message Date
markiantorno a0573907bd Updating version to: 5.1.12-SNAPSHOT and incrementing test cases dependency. 2020-09-16 04:59:05 +00:00
markiantorno 9b07831809 Release: v5.1.11
Validator:
* No changes

Other code changes:
* Support lenient mode on FIHRPath when referring to polymorphics
***NO_CI***
2020-09-16 04:42:16 +00:00
Grahame Grieve 66f0b35a38 FHIRPath - support lenient mode on polymorphics 2020-09-16 13:08:02 +10:00
markiantorno 8a11bd2e9b Updating version to: 5.1.11-SNAPSHOT and incrementing test cases dependency. 2020-09-15 05:18:08 +00:00
markiantorno efcb237d19 Release: v5.1.10
Validator:
* Fix issue with wrongly finding duplicate ids in bundles (across different resources)
* Start work on validating CDA documents
* Allow discrimination by address and name patterns

Other code Changes:
* Improve language rendering in value sets
* Fix bug generating copyright in IG publishing
* Work on CDA validation infrastructure

***NO_CI***
2020-09-15 05:01:56 +00:00
Grahame Grieve da113e25b6 remove commented out code 2020-09-15 10:57:21 +10:00
Grahame Grieve 48dca881f3 fix bug in path names for CDA 2020-09-15 10:25:23 +10:00
Grahame Grieve db8f28ea51 fix issue rendering translations in value sets 2020-09-14 18:09:40 +10:00
Grahame Grieve 6f149e691c Fix issue with finding duplicate ids in profiled bundles 2020-09-14 18:09:20 +10:00
Grahame Grieve 8855fe1bc6 Fix bug generating copyright 2020-09-14 18:08:44 +10:00
Mark Iantorno 78b61c4555
Tests should all run now (#343) 2020-09-09 12:33:38 -04:00
markiantorno 1d2e9a2be8 Updating version to: 5.1.10-SNAPSHOT and incrementing test cases dependency. 2020-09-09 06:00:52 +00:00
markiantorno 924a01fe7d Release: v5.1.9
Validator:
* fix bug loading implied packages with no version

Other Changes:
* fix bug generating error messages rendering bundles
* fix problems generating snapshots in some profiles
* fix for FHIRPath changes after discussion on Zulip
***NO_CI***
2020-09-09 05:45:19 +00:00
Grahame Grieve 14348bb6f1 Fix bug becuase Operation doesn't have copyright. 2020-09-09 13:33:55 +10:00
Grahame Grieve f696804509 Fix tests 2020-09-09 12:46:04 +10:00
Grahame Grieve a993dcd510 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-09-09 11:51:21 +10:00
Grahame Grieve 4616da8a82 fix error generating error message in rendering 2020-09-09 11:48:51 +10:00
Grahame Grieve b9bef4c3c8 fix problems generating snapshots in publisher when some profiles are not valid 2020-09-09 11:48:11 +10:00
Grahame Grieve 295b1659af Fix for FHIR path tests after discussion on Zulip 2020-09-09 11:47:23 +10:00
markiantorno a92876ab4a Updating version to: 5.1.9-SNAPSHOT and incrementing test cases dependency. 2020-09-08 05:28:46 +00:00
markiantorno a92daa2017 Release: v5.1.8
Validator Fixes:
* Check that there are no nested block HTML elements in an HTML paragraph
* create a warning for UCUM annotations

Other Changes:
* Fix some issues when converting Allergy Intolerance 3 <-> 4
* Fix issues generating invsalid HTML
* Fix up FHIRPath to pass latest test cases
* Bundle rendering improvements
* Give code interface for control over validation rules
* add support for rendering choice groups (CDA)
***NO_CI***
2020-09-08 05:13:12 +00:00
Grahame Grieve 4dd89160dd Add validation for html block elements inside paragraphs 2020-09-08 12:45:13 +10:00
Grahame Grieve 4c245ea3e3 Fix issues with generating invalid html 2020-09-08 12:43:56 +10:00
Grahame Grieve 227bccbb35 fix for empty markdown + rendering improvements for Bundles 2020-09-07 13:08:21 +10:00
Grahame Grieve f2f53c7872 FHIR Path fixes for reconciled tests 2020-09-07 13:07:21 +10:00
Grahame Grieve 2adb9a7b68 Add support for choice groups, and markdownify some elements 2020-09-04 16:23:27 +10:00
Grahame Grieve a964d4fcd5 Fix up rendering of Extensions 2020-09-04 16:22:09 +10:00
Grahame Grieve fc7f71c1f6 rework rendering tests & fix bug in Parameters renderer 2020-09-02 16:34:34 +10:00
Grahame Grieve e1f53eec47 Mark packages as unsuitable for publication 2020-09-02 16:34:06 +10:00
markiantorno aae995b72c Updating version to: 5.1.8-SNAPSHOT and incrementing test cases dependency. 2020-09-01 01:33:46 +00:00
markiantorno d3e92cf79a Release: v5.1.7
Validator:
* Better validation of bad references (and fix NPE)
* Rework output to be more informative and cleaner
* Fix bugs in validation of nested bundles
* Fix bug loading package with no specified version
* fix bugs loading discovered packages on the fly
* Validator now supports logical models in XML wkith no namespaces

Other code changes:
* Add version conversion for AllergyIntolerance (1.2 <-> 3.0 & 1.2 <-> 4.0)
* Add version conversion for MedicationRequest
* Fix rendering of documents
* fix for not rendering null values in patterns for must-support view

***NO_CI***
2020-09-01 01:16:21 +00:00
Grahame Grieve 90074b6849
Merge pull request #321 from ahdis/oe_logicalmodel_nonamespace
handling xml without namespace in logical models
2020-09-01 08:11:29 +10:00
Grahame Grieve aa9524ed93
various validation fixes (#327)
* Fix must support rendering of pattern values

* Add time tracking for progress reporting

* Add parent tracking for Validation support of nested bundles

* fix rendering of Documents

* rework validation output + fix up package loading in validator
2020-08-31 14:53:34 -04:00
markiantorno bb953fc7fc Updating version to: 5.1.7-SNAPSHOT and incrementing test cases dependency. 2020-08-27 08:09:56 +00:00
markiantorno 7349ad1f0e Release: v5.1.6
Validator:
* improve error messages for wrong code system URLs

Other code changes:
* fix rendering for must-support to not render empty values in patterns
* control over validation of aggregation modes
* fix NPE in code system comparison
* Fix verious issues
* Upgrade UCUM dependency
* fix support for multi-line comments in structure maps
* add conversion for R2 MedicationOrder -> R3 MedicationRequest
* Upgrade dependency on CQFramework
* improvements to OID to URL conversion
* Fix issue with round-tripping resources with primitives with no value
***NO_CI***
2020-08-27 07:53:37 +00:00
Grahame Grieve 2e5dd95ede fix rendering for must-support to not render empty values in patterns 2020-08-27 16:22:51 +10:00
Grahame Grieve 9578933704 control over aggregation validation 2020-08-27 16:22:21 +10:00
Grahame Grieve de5310c13a remove spurious log outputs 2020-08-27 12:36:50 +10:00
Grahame Grieve e669103aa7 upgrade to pass new reconciled tests 2020-08-27 12:36:10 +10:00
Grahame Grieve 765f24a233 fix bug in code system comparison 2020-08-27 12:33:13 +10:00
markiantorno dcf3f5f218 Upping UCUM dependency, fixing old junit dependencies 2020-08-26 17:26:39 -04:00
Oliver Egger 23cce5b0a7 handle xml default namespace for logical model 2020-08-26 16:53:50 +02:00
Grahame Grieve f52297ae26
Merge pull request #318 from ahdis/oe_structuremaps
structure maps: line comments and fhir path expression
2020-08-26 12:51:10 +10:00
Grahame Grieve 1625c171ae Fix bug where discriminating on erroneous URL 2020-08-26 10:35:04 +10:00
Oliver Egger 8f302e0063 mend 2020-08-25 23:34:33 +02:00
Oliver Egger f0667ed3e2 extended line comment support and not quoting fhirpath expressions 2020-08-25 22:02:01 +02:00
Oliver Egger 381525fc17 extend tests for structuremaps text serializing 2020-08-25 22:00:00 +02:00
Grahame Grieve 0287248a48 work on oid to URI conversion - scope and efficiency 2020-08-24 17:14:49 +10:00
Grahame Grieve 904e600016 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-08-21 15:29:20 +10:00
Grahame Grieve eb228bd1e3 Add round trip tests and add fix for round-tripping issue 2020-08-21 15:27:38 +10:00
markiantorno 9f23ff6ea9 Updating version to: 5.1.6-SNAPSHOT and incrementing test cases dependency. 2020-08-20 12:41:28 +00:00
markiantorno 6c156f7001 Release: v5.1.5
Validator:
* No changes

Other code changes:
* Update R5 code to new release R4.5.0
***NO_CI***
2020-08-20 12:22:59 +00:00
Grahame Grieve 8ee4eff74c fix default value for validator setting + hack work around for R5 broken process 2020-08-20 21:00:11 +10:00
Grahame Grieve 5fc297b3b5 Upgrade R5 to latest version 2020-08-20 20:37:10 +10:00
markiantorno be5ba84652 Updating version to: 5.1.5-SNAPSHOT and incrementing test cases dependency. 2020-08-18 22:50:45 +00:00
markiantorno 8ce263a127 Release: v5.1.4
Validator:
* No changes

Other code changes:
* Remove old comparison code
* Don't lazy load simplifier packages
* Add links in version comparisons
* fix NPE in SimpleWorkerContext

***NO_CI***
2020-08-18 22:35:42 +00:00
Grahame Grieve ced57a5dfe
minor fixes to support main build (#311)
* fix up POMs

* fixes for main build to use packages

* more config for validator

* more options for validation version comparison

* clear notes

* more work on better presentation for comparison

* Remove old comparison code

* remove old comparison code

* fix loading bug

* fix to not load Simplifier packages via lazy loading
2020-08-18 09:27:02 -04:00
markiantorno 57e3ae0f15 Updating version to: 5.1.4-SNAPSHOT and incrementing test cases dependency. 2020-08-17 14:28:29 +00:00
markiantorno a27fa4ce18 Release: v5.1.3
Validator:
* add support for -bundle parameter to allow validating just one resource (/type) in a bundle
* improved reporting of errors and warnings for unknown code systems on required bindings
* pass dependencies to the server for imported value sets etc
* use server side caching for more efficient use of bandwidth
* Fix NPE loading packages from simplifier or old packages (and don't lazy load packages passed to command line)

Other code changes:
* further work on comparing CapabilityStatements (nearly, but not quite, finished)
* More work on timeouts in terminology client
* Fix for parsing error in R3/R4 sparse arrays for primitives types
* Improve terminology client logging
* don't reload a package if already loaded
* rendering: fix NPEs rendering patient summary, and render expressions for quantities
***NO_CI***
2020-08-17 14:07:49 +00:00
Grahame Grieve eb23fcc5e4
more config for validator (#309)
* fix up POMs

* fixes for main build to use packages

* more config for validator

* more options for validation version comparison
2020-08-17 09:53:54 -04:00
markiantorno f6b4df237f fixing versioning 2020-08-17 09:04:08 -04:00
markiantorno 127bbc9e38 Release: v5.1.2
***NO_CI***
2020-08-16 02:26:50 +00:00
markiantorno c09becfba2 Updating version to: 5.1.3-SNAPSHOT and incrementing test cases dependency. 2020-08-15 23:06:25 +00:00
markiantorno cb1abcad25 Release: v5.1.2
Validator:
* add support for -bundle parameter to allow validating just one resource (/type) in a bundle
* improved reporting of errors and warnings for unknown code systems on required bindings
* pass dependencies to the server for imported value sets etc
* use server side caching for more efficient use of bandwidth
* Fix NPE loading packages from simplifier or old packages (and don't lazy load packages passed to command line)

Other code changes:
* further work on comparing CapabilityStatements (nearly, but not quite, finished)
* More work on timeouts in terminology client
* Fix for parsing error in R3/R4 sparse arrays for primitives types
* Improve terminology client logging
* don't reload a package if already loaded
* rendering: fix NPEs rendering patient summary, and render expressions for quantities
***NO_CI***
2020-08-15 22:49:38 +00:00
markiantorno be26988adf fixing versions and test dependencies 2020-08-15 18:37:03 -04:00
markiantorno 7f5c5e36dd Release: v5.1.1
Validator:
* add support for -bundle parameter to allow validating just one resource (/type) in a bundle
* improved reporting of errors and warnings for unknown code systems on required bindings
* pass dependencies to the server for imported value sets etc
* use server side caching for more efficient use of bandwidth
* Fix NPE loading packages from simplifier or old packages (and don't lazy load packages passed to command line)

Other code changes:
* further work on comparing CapabilityStatements (nearly, but not quite, finished)
* More work on timeouts in terminology client
* Fix for parsing error in R3/R4 sparse arrays for primitives types
* Improve terminology client logging
* don't reload a package if already loaded
* rendering: fix NPEs rendering patient summary, and render expressions for quantities
***NO_CI***
2020-08-15 21:41:16 +00:00
Grahame Grieve cbf70365f1 fix value set validation to deal with multi-heirarchy 2020-08-16 06:48:06 +10:00
Grahame Grieve 7771c7f231 Significant improvement to performance rendering value sets, and only use server side caching if the server declares it supports it 2020-08-14 08:09:02 +10:00
markiantorno eed1d730c4 Updating version to: 5.1.2-SNAPSHOT and incrementing test cases dependency. 2020-08-13 15:23:03 +00:00
markiantorno beeaf26b6d Release: v5.1.1
Validator:
* add support for -bundle parameter to allow validating just one resource (/type) in a bundle
* improved reporting of errors and warnings for unknown code systems on required bindings
* pass dependencies to the server for imported value sets etc
* use server side caching for more efficient use of bandwidth
* Fix NPE loading packages from simplifier or old packages (and don't lazy load packages passed to command line)

Other code changes:
* further work on comparing CapabilityStatements (nearly, but not quite, finished)
* More work on timeouts in terminology client
* Fix for parsing error in R3/R4 sparse arrays for primitives types
* Improve terminology client logging
* don't reload a package if already loaded
* rendering: fix NPEs rendering patient summary, and render expressions for quantities
***NO_CI***
2020-08-13 15:03:45 +00:00
Grahame Grieve 2c0fe519cb
more work on code validation (#306)
* Handle unknown code systems better when checking codes from unknown systems

* more work on code validation

* more work on comparison

* hack workaround for UTG NUCC problem.

* adjust exception type

* more work on timeouts

* improve error message

* fix NPE?

* release notes

* Improve error message
2020-08-13 09:47:05 -04:00
Grahame Grieve 008dc84546 Use server side caching to reduce the bandwidth utilitization 2020-08-13 08:14:54 +10:00
Grahame Grieve bb320892e6 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-08-13 06:52:18 +10:00
jamesagnew 09d0ae4caa Bump version to 5.1.1-SNAPSHOT for next development cycle 2020-08-12 05:33:18 -04:00
Grahame Grieve 92d031b968 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-08-12 14:52:31 +10:00
Grahame Grieve 10927445e2 Pass dependencies when evaluating a value set ($validate-code or $expand) 2020-08-12 14:49:51 +10:00
Grahame Grieve cef25b4bf0 don't reload an already loaded package 2020-08-12 14:45:49 +10:00
Grahame Grieve 9e422a1a2e improve terminology logging 2020-08-12 14:44:41 +10:00
jamesagnew 98ba0506c2 Version bump to 5.1.0 2020-08-11 17:41:20 -04:00
Grahame Grieve 6ecf1c8f99 Fix issues with reloading package once already loaded in validator + add test case 2020-08-12 05:11:35 +10:00
Grahame Grieve 20a7682c96 Add support for bundle profile parameter 2020-08-11 06:40:11 +10:00
Grahame Grieve 1555849e9a updates to PR 2020-08-11 05:44:13 +10:00
Grahame Grieve 039027c588 Comparison for CapabilityStatements 2020-08-10 15:57:14 +10:00
Grahame Grieve 96d769a6e2 prevent NPEs generating patient summary 2020-08-10 15:53:48 +10:00
Grahame Grieve bc11ac5c5b Start working on rendering expressions 2020-08-10 15:53:08 +10:00
Grahame Grieve 74c11cfec1 Fix problem loading old style packages not suitable for lazy loading. 2020-08-10 15:51:59 +10:00
markiantorno 1af6268fa8 Updating version to: 5.0.23-SNAPSHOT and incrementing test cases dependency. 2020-08-07 03:51:36 +00:00
markiantorno 5c4c5ce1c8 Release: v5.0.22
Validator:
* no changes

Other code:
* Continue to work on connection timeout issues
* Fix bug in DiagnosticReportRenderer (wrong element accessed)
* change type of resource parameter to ResourceRender.build
***NO_CI***
2020-08-07 03:33:21 +00:00
Grahame Grieve ad07997c5d fix bug handling fragment code systems with value sets with pre-build expansions 2020-08-07 11:30:31 +10:00
Grahame Grieve a12b1bdc93 change type of resource parameter to ResourceRender.build 2020-08-07 11:28:18 +10:00
Grahame Grieve 800e381629 Fix bug in DiagnosticReportRenderer (wrong element accessed) 2020-08-07 11:27:57 +10:00
Grahame Grieve 4add0f3ac8 Continue to work on connection timeout issues 2020-08-07 11:26:44 +10:00
markiantorno ac2ae655d5 Final pipeline versioning fix 2020-08-06 15:12:20 -04:00
markiantorno 37134e5252 Updating version to: 1.1.30-SNAPSHOT and incrementing test cases dependency. 2020-08-06 19:06:12 +00:00
markiantorno 340250cf74 Release: v5.0.21
* Release pipelines fix for incrementing external dependencies
***NO_CI***
2020-08-06 18:49:05 +00:00
markiantorno 91c1ed7e31 Fixing build pipelines issue 2020-08-06 13:56:27 -04:00
markiantorno 49695b2801 Updating version to: null.object.1-SNAPSHOT and incrementing test cases dependency. 2020-08-06 16:23:24 +00:00
markiantorno 97c974ca38 Release: v5.0.20
Validator:
* Fix for problem with expansion code checking and incomplete value sets

General Code changes:
* Work on connection problems to terminology server
* Fix for problem loading Measures from packages
* Work on i18n for Rendering
* fix case bug renderung bundles and parameters
* start working on i18n for Rendering
***NO_CI***
2020-08-06 15:40:30 +00:00
Grahame Grieve f73147523a
Gg v5.0.20 work (#294)
* ongoing work around connection problems with tx.fhir.org

* fix for bug processing CCDA constraints (logical model constraints)

* fix for bug loading Measures from packages

* fix NPEs loading invalid packages

* Start Working on i18n for Rendering + Fix case bug rendering bundles and parameters

* Fix for problem with expansion code checking and incomplete value sets

* release notes
2020-08-06 10:51:05 -04:00
markiantorno f54e56e74c Updating version to: 5.0.20-SNAPSHOT 2020-08-05 23:31:54 +00:00