Commit Graph

1452 Commits

Author SHA1 Message Date
markiantorno 072be957d4 Release: v6.3.1
## Validator Changes

* Add validation for CodeSystem Properties and ValueSet filters
* More validation for Code Systems: contained code systems, supplement cross checks
* Add more validation around ValueSet.compose.include.system - must be a proper URL, and not a direct reference to a supplement
* HL7: Don't require HL7 publishing status on contained resources
* Don't walk into nested bundles when validating links in bundles
* fix up implementation of notSelectable in value set filters
* Add check for multiple version matches for a versionless canonical reference

## Other code changes

* Fix narrative generator generating duplicate anchors (prefix 'hc')
* exclude .DS_Store from generated zip files
* Add cross-version support extension
* Add ConceptMap utilities in support of cross-version module
***NO_CI***
2024-03-10 20:52:29 +00:00
Grahame Grieve 0076a2206d ConceptMap utilities 2024-03-05 20:10:13 +11:00
Grahame Grieve 7fb2b1ea00 fix bug in Publisher where examples with profiles aren't properly interpreted as examples in R5 2024-03-01 16:40:24 +11:00
markiantorno 48023c0ba4 Updating version to: 6.3.1-SNAPSHOT and incrementing test cases dependency. 2024-02-28 05:56:31 +00:00
markiantorno b44c34c7e2 Release: v6.3.0
## Validator Changes

* Fix significant bug where validator gets internal child lists incorrect and doesn't do complete validation when switching between validating profiles and resources directly
* Performance improvement for validator parsing - thanks Brian Postlethwaite
* Fix Crash on slicing a sliced element #862
* Fix ig loading from direct URL (#1559)
* Fix bug copying constraints into Bundle.entry.resource profiles
* Fix bug loading R5 extensions with imported value sets
* Replace dom-3 with custom java code, and check xhtml references to contained content
* Improve concept map code validation
* Update observation validator for committee decision not to enforce Blood Pressure profile for Mean Blood Pressure
* Validate value set internal codeSystem references
* Split value set validation into 10k batches for very large extensional value sets
* Hack fix for opd-3
* Fix bug where using ontoserver when not appropriate
* Fix issues with inferSystem
* Don't require HL7 committee for contained resources in HL7 namespace
* Fix where validator was ignoring minimum cardinality for XML attributes (especially in CDA)
* Improved ConceptMap validation
* Updated IG versions used for -cda and -ccda CLI validation options.
* Change validator so that it marks value properties in primitive data types as illegal

## Other code changes

* Fix code system rendering for uri properties
* Fix broken links Bundle and Profile rendering
* Take copy of code when doing local validation
* WIP: major refactor of cross version analysis
* Add support for subsumes in tx client
* Don't generate snapshots when scanning structure definitions for resource names
* Work on ConceptMap infrastructure for cross-version analysis
* Fix bug where not rendering ConceptMap relationships
* Fix wrong URLs rendering Profiles and Questionnaires
* Fix bug using wrong version constant for R3
* Updates for R5 StructureMap syntax
* Support for case sensitive Code system tests
* Add TurtleGeneratorTests for R5
* Introduce new validator cliContext option disableDefaultResourceFetcher (#1526)
* Render contained resources when rendering Patient resources
* Fix bug in FML Parser
***NO_CI***
2024-02-28 05:04:13 +00:00
Grahame Grieve db5605a5ab fix compile problem 2024-02-28 15:30:12 +11:00
Grahame Grieve 0bb1f82460 fix test case for fix in fml parsing 2024-02-28 00:03:28 +11:00
Grahame Grieve 60cf499659 Move x-version code to IG Publisher 2024-02-26 11:48:07 +11:00
Grahame Grieve 8e5791ca82 compile fix 2024-02-25 20:51:13 +11:00
Grahame Grieve df3456d293 Add support for subsumes in tx client 2024-02-25 19:14:12 +11:00
Grahame Grieve 981d201046 WIP: major refactor of cross version analysis 2024-02-25 19:12:16 +11:00
Grahame Grieve 2628010dff Fix code system rendering for uri properties 2024-02-10 23:10:31 +11:00
markiantorno 3a1946e37d Updating version to: 6.2.16-SNAPSHOT and incrementing test cases dependency. 2024-01-30 11:13:01 +00:00
markiantorno 0bb2010409 Release: v6.2.15
## Validator Changes

* Fix bug in deciding whether a ValueSet is supported by the server
* Rework server decision making when multiple code systems being used
* Fix file type inference in ValidationService for unknown file types

## Other code changes

* Kindling related fixes for terminology stability
* Fix parameter type for system-version
* Fix mini-terminology server bugs around unknown systems
* Improvements to Identifier rendering
***NO_CI***
2024-01-30 10:29:12 +00:00
dotasek.dev 56d3da1722 Bump version 2024-01-26 11:12:00 -05:00
Grahame Grieve 81569a3984 remove duplicate way of handling parameters on expand value set 2024-01-26 06:27:24 +11:00
markiantorno 4ffe900fb3 Updating version to: 6.2.14-SNAPSHOT and incrementing test cases dependency. 2024-01-19 12:52:04 +00:00
markiantorno bebd1f31c1 Release: v6.2.13
## Validator Changes

* no changes

## Other code changes

* Fix for handling large expansions correctly
***NO_CI***
2024-01-19 12:17:24 +00:00
Grahame Grieve 41c5f8fee5
Merge pull request #1549 from hapifhir/2024-01-gg-expansion-rework
Fix the way overly large value set expansions are handled
2024-01-19 21:54:51 +11:00
Grahame Grieve a3d4c0645d Fix the way overly large value set expansions are handled 2024-01-19 20:09:57 +11:00
markiantorno a85b5e74cd Updating version to: 6.2.13-SNAPSHOT and incrementing test cases dependency. 2024-01-19 03:37:05 +00:00
markiantorno 8ff31256fe Release: v6.2.12
## Validator Changes

* Handle terminology server errors better

## Other code changes

* Fix expansion related bugs and adjust tests accordingly
* Update test framework for changes to expansion functionality
* Update presentation of fixed and pattern values in profile views
* Handle toString for XhtmlNode when nodeType == null
***NO_CI***
2024-01-19 02:47:02 +00:00
Grahame Grieve 29dbcbfb63 Handle server errors better 2024-01-19 10:38:31 +11:00
markiantorno 2156a44395 Updating version to: 6.2.12-SNAPSHOT and incrementing test cases dependency. 2024-01-18 03:15:19 +00:00
markiantorno 4ca3400a86 Release: v6.2.11
## Validator Changes

* Remove debugging code hiding error from server

## Other code changes

* fix broken links rendering questionnaires
* render target profiles on operation definition parameters
* fix up cvx importer
***NO_CI***
2024-01-18 02:26:19 +00:00
Grahame Grieve 42e3b9a948 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-01-18 11:46:49 +11:00
Grahame Grieve 26aef43278 fix up cvx importer 2024-01-18 11:40:12 +11:00
markiantorno 0c431880f7 Updating version to: 6.2.11-SNAPSHOT and incrementing test cases dependency. 2024-01-17 16:48:24 +00:00
markiantorno 9c15aff0f3 Release: v6.2.10
## Validator Changes

* Fix issues with multiple terminology servers (should be live soon)
* Rework terminology system & cache to support new terminology server ecosystem
* Handle value set with exclusion filters when expanding
* Fix to consistent error messages when value sets can't be resolved

## Other code changes

* Fix bug processing empty structure maps
* Performance improvements to common IO routines, with test cases - see https://blog.qligier.ch/posts/2024-improving-perf-ig-publisher-io/ (thanks to Quentin Ligier)
***NO_CI***
2024-01-17 15:53:34 +00:00
Grahame Grieve 8613cd3944 rework terminology cache to manage multiple terminology servers 2024-01-17 20:44:37 +11:00
dotasek 602a113363 Fix version bump 2024-01-16 16:26:25 -05:00
Grahame Grieve ec67f6c97a Add search support to ITerminologyClient 2024-01-16 11:41:54 +11:00
Grahame Grieve 56fc442db4 revise BOM handling for stringToX routines 2024-01-15 17:29:42 +11:00
markiantorno e2ba911f4e Updating version to: 6.2.9-SNAPSHOT and incrementing test cases dependency. 2024-01-10 21:29:35 +00:00
markiantorno a5e0b5a1dd Release: v6.2.8
## Validator Changes

* Major rework of tx and validation test cases associated with reworking terminology / validator interface and ongoing testing + reconciliation with Ontoserver
major upgrade to validation - use terminology server to perform more logic, and standardise interface based on agreements with Vocab & Ontoserver
* Improve slicing error message
* Add warning to user when referencing an extension that doesn't exist in FHIRPath
* Fix bugs in FHIRPath implementation of split() and join()
* Fix bug handling null objects in JSON (R5)
* Fix for missing search parameter definition in R4
* fix bug handling XML name extension
* Fix FHIRPath validation errors around use of %resource and %rootResource
* Correct validator enforcement of minValue for decimal and integer (#1538)

## Other code changes

* Properly populate property definitions in expansions
* Add CVX Importer
* R6 release support
* IPS tool development
* Improved errors publishing IGs
* Refactor Context to support multiple terminology services
* change type of error when value set circularity found
* Track generated side files when rendering resources
* Support for extended Unicode characters in XHTML / XML / JSON / Turtle
***NO_CI***
2024-01-10 21:03:47 +00:00
Grahame Grieve 9b9aa51e36 update headers on client to add ;fhirVersion=X 2024-01-10 15:48:47 +11:00
Grahame Grieve d74b0e2b4a Refactor Context to support multiple terminology services 2024-01-08 21:07:08 +11:00
Grahame Grieve 1bd69f68de Add CVX Importer 2023-12-30 22:47:45 +11:00
Grahame Grieve 3ed816209d update terminology server for test reconciliation with tx.fhir.org 2023-12-25 00:28:39 +11:00
markiantorno d4d7600635 Updating version to: 6.2.8-SNAPSHOT and incrementing test cases dependency. 2023-12-15 13:00:23 +00:00
markiantorno 6c78cc3e48 Release: v6.2.7
## Validator Changes

* Fix up validation of fragment and example value sets
* Improve handling of terminology messages + handling of example and fragment code systems
* Add support for logical_container extension (for CDA constraint validation)
* Clean up handling of xml_name
* Check for xver extension canonical urls when validating uri elements
* Upgrade xver to latest R5 definitions

## Other code changes

* Fix string index error in xver manager
* Fix rendering of type for previous versions
***NO_CI***
2023-12-15 10:50:47 +00:00
markiantorno ceaa131d81 Updating version to: 6.2.7-SNAPSHOT and incrementing test cases dependency. 2023-12-13 19:07:52 +00:00
markiantorno b5902aac98 Release: v6.2.6
## Validator Changes

* Fix bug where validator doesn't actually validate web sourced input
* Fix narrative link validation and add id/idref validation
* Remove fhir-test-cases from Validator CLI JAR (#1497) (reduce size)
* Fix to CDA xsi:type validation per SD decision
* Apply regex pattern to literal format if defined
* Improvements to vital signs related messages
* Fix R4 con-3 FHIRPath expression
* Fix bug loading packages with partially specified version that doesn't exist
* Fix for occasional missing warnings around bundle link validation
* Fix using wrong resource type when validating constraints in data type definitions during R6 build
* Fix NPE in validator processing CCDA examples
* Fix problem with version dependencies when loading npm packages directly as files
* Fix for SearchParameter validation using custom resource types

## Other code changes

* Bump commonmark version
* fix Utilities display of time periods (fixed width hour:min)
* Fix stated path for error when code not in value set
* Fix rendering of trigger definition using tables inside paragraphs
* Update VSAC importer to fix timeout issues
* Refactor FHIRPath java package
* Fix problem with profiled resources being called examples in IG publisher
* Remove dependencies for unused UI experiment (#1465)
* Remove AU connectathon
* Include hamcrest dependency
* Fix breaking ValidationEngineTests
* Give kinder error message for missing param
* Fix commonmark group and bump version (#1500)
* Remove dep used for local testing
* Bump jackson & logback versions
* Fix StringType element properties not being copied in various Address, HumanName convertors
* Handle all initial value types when rendering Questionnaires
* Ensure Address.line[] element data is copied over
* Write locking on FilesystemPackageCacheManager
* Fix problems setting owning committee consistently
* Utility classes for fule system package cache pre-loading
***NO_CI***
2023-12-13 18:41:20 +00:00
dotasek 0afea8dc1d
CLI Task to preload package cache (#1508)
* WIP start building preload task

* Slightly refactor exceptions

* sleep between each query

* WIP - FilesystemPackageCacheManager refactor

* Finish refactor

* Customize PackageVisitor

* Remove unused code

* Remove unused code 2

* Add debug logging for failing test

* Point withCacheFolder if to correct param

* Remove console chatter

* Rename to FilesystemPackageCacheManager.Builder

* Move logic to PackageCacheDownloader for re-use in other projects

* Fix spacing
2023-12-13 11:27:15 -05:00
Augustas Vilcinskas 34ac72ab93 Fix StringType conversion in HumanName convertors 2023-12-04 17:31:35 +01:00
Augustas Vilcinskas c1b718afc5
Ensure Address.line[] element data is copied over 2023-12-04 13:37:01 +01:00
Grahame Grieve 6e81418308 update VSAC to fix timeout issues 2023-12-01 16:54:33 +11:00
Grahame Grieve 18c4419b9e refactor FHIRPath package 2023-12-01 15:13:33 +11:00
Grahame Grieve 516ec50afa Fix problem with profiled resources being called examples in IG publisher 2023-12-01 10:37:46 +11:00
markiantorno bf426e2d28 Updating version to: 6.2.6-SNAPSHOT and incrementing test cases dependency. 2023-11-24 19:35:02 +00:00