Commit Graph

1063 Commits

Author SHA1 Message Date
Grahame Grieve f73147523a
Gg v5.0.20 work (#294)
* ongoing work around connection problems with tx.fhir.org

* fix for bug processing CCDA constraints (logical model constraints)

* fix for bug loading Measures from packages

* fix NPEs loading invalid packages

* Start Working on i18n for Rendering + Fix case bug rendering bundles and parameters

* Fix for problem with expansion code checking and incomplete value sets

* release notes
2020-08-06 10:51:05 -04:00
markiantorno f54e56e74c Updating version to: 5.0.20-SNAPSHOT 2020-08-05 23:31:54 +00:00
markiantorno f6071cb0df Release: v5.0.19
Validator:
* Improved handling of terminology timeout issues

Other code changes:
* fix questionnaire rendering to create valid resources
***NO_CI***
2020-08-05 22:50:40 +00:00
Grahame Grieve c70c43271a fix questionnaire rendering to create valid resources 2020-08-06 07:38:20 +10:00
Grahame Grieve b4a65d1825 fix heirarchy for XhtmlType 2020-08-06 07:37:20 +10:00
Grahame Grieve dd48811c86 debugging improvements 2020-08-06 07:36:38 +10:00
Grahame Grieve 3f6207bf4f improve handling of timeout issues in client 2020-08-06 07:35:49 +10:00
markiantorno ea322996f3 Updating version to: 5.0.19-SNAPSHOT 2020-08-03 21:14:01 +00:00
markiantorno 18cf563e78 Release: v5.0.18
Validator Fixes:
* better validation of external references. Note: this is a potentially significant change: things that were called ok before may not be now, and things that were not ok before may become so, depending on the interplay between this and auto-load, further work may be needed here
* Support better validation of version specific profiles in meta.profile. This may also find new errors that were not previously being found
* Support auto-determination of the version of FHIR to use when using the java validator
* auto-load packages from the package server when references to profiles etc are encountered
* look for references inside other parameters in Parameters resource
* no validation for CanonicalResource.url (further work needed)

Other Code changes:
* Rendering: add rendering for Parameters resources
* Rendering: refactor of resource resolution code to support Parameters
* General clean up of rendering consistency & implement additional details when rendering (including patient summary)
* Rendering: major overhaul of DiagnosticReport rendering
* Fix NPE bug in value set comparison

***NO_CI***
2020-08-03 20:51:09 +00:00
Grahame Grieve 5299bbe16b * better validation of external references. Note: this is a potentially significant change: things that were called ok before may not be now, and things that were not ok before may become so, depending on the interplay between this and auto-load, further work may be needed here
* Support better validation of version specific profiles in meta.profile. This may also find new errors that were not previously being found
* Support auto-determination of the version of FHIR to use when using the java validator
* auto-load packages from the package server when references to profiles etc are encountered
* look for references inside other parameters in Parameters resource
2020-08-03 17:40:21 +10:00
Grahame Grieve 7616b55213 * Rendering: add rendering for Parameters resources
* Rendering: refactor of resource resolution code to support Parameters
* General clean up of rendering consistency & implement additional details when rendering (including patient summary)
* Rendering: major overhaul of DiagnosticReport rendering
2020-08-03 17:36:32 +10:00
Grahame Grieve 137d04f68d fix NPE error comparing value sets 2020-08-03 17:30:37 +10:00
Grahame Grieve 477bf66108 Fix broken links in Bundle rendering 2020-08-01 08:55:46 +10:00
Grahame Grieve ebead8fd7c fix bugs in comparisons 2020-07-31 12:51:43 +10:00
Grahame Grieve 59b0f032cb fix for NPE in FHIRPath parser 2020-07-31 12:48:54 +10:00
markiantorno 82125235a0 Updating version to: 5.0.18-SNAPSHOT 2020-07-30 04:47:14 +00:00
markiantorno a375f58c82 Release: v5.0.17
* Batch validation of codes in value sets
* Fix path problem doing comparisons
* Don't produce 2 columns for status for deprecated codes
* Fix errors in StructureDefinition validation
***NO_CI***
2020-07-30 04:18:42 +00:00
Grahame Grieve 5aec9978bd fix up tests to pass 2020-07-30 12:35:16 +10:00
Grahame Grieve 569718d829 Code formatting + fix code system rendering 2020-07-30 12:03:03 +10:00
Grahame Grieve 883f4ee4cb batch value set validation 2020-07-30 12:02:04 +10:00
Grahame Grieve 2c1460a663 ditto 2020-07-30 12:01:35 +10:00
Grahame Grieve a80d11334a Fix bug producing invalid xhtml 2020-07-30 12:01:09 +10:00
Grahame Grieve 4b5470f825 Don't produce 2 columns for status for deprecated codes 2020-07-30 12:00:30 +10:00
Grahame Grieve bde55f1872 Improve error message 2020-07-30 11:59:37 +10:00
Grahame Grieve 1ef4e59113 fix path problem in comparison 2020-07-30 11:58:55 +10:00
Grahame Grieve ea52c4206f Batch validation of codes in value sets 2020-07-30 11:57:11 +10:00
markiantorno a154f454b4 Updating version to: 5.0.17-SNAPSHOT 2020-07-28 05:15:29 +00:00
markiantorno 5dcef3e530 Release: v5.0.16
* fix evaluation of codes in code systems that are labelled content = fragment
* fix url for cqfmeasures project
* change from error to warning for code system fragments

***NO_CI***
2020-07-28 04:51:08 +00:00
Grahame Grieve 62b70947b8 warning not error on code system fragment 2020-07-28 12:43:55 +10:00
Grahame Grieve b256965738 * fix evaluation of codes in code systems that are labelled content = fragment 2020-07-28 06:06:01 +10:00
markiantorno 2fc1d481e4 Updating version to: 5.0.16-SNAPSHOT 2020-07-27 15:40:41 +00:00
markiantorno c55982c47b Release: v5.0.15
* Version comparison support
* Fix for problem validating search parameter derivation
* Added lazy resource loading - improve loading times and memory requirements in advance of the challenge of loading UTG for most use cases
* Fixed bug where canonical resource has no URL
***NO_CI***
2020-07-27 15:14:44 +00:00
Grahame Grieve bf0f81f51b
version comparison support (#284)
* add package url fixer

* fix problems doing CCDA snapshots

* Fix for http://hl7.org/fhir/StructureDefinition/capabilitystatement-expectation

* improve error message

* fix package id in generated version specific tests

* remove spurious debug statement

* rework package loaders for automatic loading of package dependencies

* fix spelling mistake

* add automatic loading of package dependencies by the context

* significant work on tests to support version comparison

* fix minor loading issue

* compile fix

* utils support

* fixes for version comparison

* rework error handling when expanding valuesets + add error check on value set imports

* fix loading bug

* improve error message
2020-07-27 09:04:31 -04:00
Grahame Grieve b9755c8f1f fix tests 2020-07-22 10:19:32 +10:00
Grahame Grieve f6c7d294c4 fix problem validating search parameter derivation 2020-07-22 08:10:12 +10:00
Grahame Grieve a985831d76 efficiency cleanup 2020-07-22 07:02:15 +10:00
Grahame Grieve 701ac1b560 fix bug when canonical resource has no URL 2020-07-22 06:59:53 +10:00
Grahame Grieve 6421226011 more improvements around lazy loading 2020-07-21 17:14:08 +10:00
Grahame Grieve acbba54d25 fix issues in testing 2020-07-21 06:16:45 +10:00
markiantorno 27e8aa0bec wip 2020-07-20 13:30:21 -04:00
Grahame Grieve c53db20879 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-07-20 22:58:16 +10:00
Grahame Grieve 52267118c6 implement lazy loading - improve loading times and memory requirements in advance of the challenge of loading UTG for most use cases 2020-07-20 22:57:15 +10:00
markiantorno b877474fc8 Updating version to: 5.0.15-SNAPSHOT 2020-07-17 22:21:01 +00:00
markiantorno 675c2751aa Release: v5.0.14
* Fix for temp directory creation test on Windows machines
* Deployment fix
***NO_CI***
2020-07-17 21:55:26 +00:00
markiantorno e14de3b339 Updating version to: 5.0.14-SNAPSHOT 2020-07-17 05:55:20 +00:00
markiantorno fb886a7217 Release: v5.0.13
Validator:
* Add support for conformsTo in invariants on elements
* Fix bug in assumeValidRestReferences doing bundle validation
* Add -show-times parameter
* Handle weird ege case for fixedReference

Code:
* add support for row opacity in rendered tables
* fix cross version convertor for DataRequirements
* fix rendering of multiple type profiles
* add code for converting resource names between versions
* add FHIRPath engine to i18n framework
* fix bundle rendering
* change HTML parser to parse doctype declaration, and move html validation to the validator
* snapshot generator - fix bug where slices get cardinaliyt min=1 by default
***NO_CI***
2020-07-17 05:45:51 +00:00
Grahame Grieve 9bbe5ab5c8 improve rendering of contained resources 2020-07-17 13:42:44 +10:00
Grahame Grieve ad46dfd611 Add more debugging to shapshot tests 2020-07-17 09:29:08 +10:00
Grahame Grieve 72b0aa6442 fix up implementation of htmlChecks/htmlChecks2 2020-07-17 09:28:20 +10:00
Grahame Grieve bb8fde3682 fix bug assigning min=0 to slices by default 2020-07-17 09:27:51 +10:00
Grahame Grieve 4dc78b5b3c add support for table row opacity 2020-07-16 09:19:40 +10:00
Grahame Grieve fe29c3022f implement HTMLChecks in FHIRPath 2020-07-15 16:44:44 +10:00
Grahame Grieve 1736784bae Add check for constraining must=support wrongly 2020-07-15 16:43:57 +10:00
Grahame Grieve 5ae6aa23fd fix problem with snapshot test infrastructure 2020-07-15 16:43:16 +10:00
Grahame Grieve fa7de3a308 more FHIRPath engine into i18n framework 2020-07-14 08:16:56 +10:00
Grahame Grieve b65567010c fix rendering of target types in profiles 2020-07-14 07:47:15 +10:00
Grahame Grieve 7d7c1315d4 fix bundle labels when rendering 2020-07-10 06:50:55 +10:00
markiantorno facb2ca0a8 Updating version to: 5.0.13-SNAPSHOT 2020-07-07 02:37:39 +00:00
markiantorno b770fb8a2c Release: v5.0.12
* Fix bug in snapshot generation - not handling case where content is sliced, base slicing detail is provided, and max slices = 1
* More work on validating existing snapshots

***NO_CI***
2020-07-07 02:27:57 +00:00
Grahame Grieve ce47093c12
Gg work (#267)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests

* fix bug finding children in getChildList when element is a reference to another element

* fixes to QuestionnaireRenderer + add QuestionnaireResponseRenderer

* Add more informative error when no type parser provided

* fix bug where current/dev builds do not properly update the cache

* improve test error message

* set up release notes

* fix bug with CDA snapshot generation

* fix bug in type checking code

* Add support for validating against ImplementationGuide.global

* Fix bug in QuestionnaireResponse rendering

* update tests dependency

* ping build

* Add additional StructureDefinition validation

* update release notes

* fix npe rendering diagnostic reports without subjects

* don't add note on untranslatable messages

* check existing snapshots (preliminary)

* add signpost message tracking

* start working on profile generating bug

* Fix bug in snapshot - not handling case where content is sliced, base slicing detail is provided, and max slices = 1

* fix release notes
2020-07-06 20:21:40 -04:00
markiantorno ab8bbb5491 Updating version to: 5.0.12-SNAPSHOT 2020-07-04 00:25:03 +00:00
markiantorno 9d5cb114a2 Release: v5.0.11
* Added text/cql.identifier media type to Measure validation
* Fix bug in QuestionnaireResponse rendering
* Validate based on ImplementationGuide.global
* add validation parameter -crumb-trails
* improve validation of StructureDefinitions

***NO_CI***
2020-07-04 00:15:32 +00:00
Grahame Grieve 92c02d2294
Add support for validating against ImplementationGuide.global (#266)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests

* fix bug finding children in getChildList when element is a reference to another element

* fixes to QuestionnaireRenderer + add QuestionnaireResponseRenderer

* Add more informative error when no type parser provided

* fix bug where current/dev builds do not properly update the cache

* improve test error message

* set up release notes

* fix bug with CDA snapshot generation

* fix bug in type checking code

* Add support for validating against ImplementationGuide.global

* Fix bug in QuestionnaireResponse rendering

* update tests dependency

* ping build

* Add additional StructureDefinition validation

* update release notes
2020-07-03 18:25:15 -04:00
markiantorno 97f6758969 Updating version to: 5.0.11-SNAPSHOT 2020-07-01 00:52:38 +00:00
markiantorno 9602898b73 Release: v5.0.10
* Added text/cql.identifier media type to Measure validation
***NO_CI***
2020-07-01 00:43:41 +00:00
Grahame Grieve 9024a309ac
fix various bugs (#265)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests

* fix bug finding children in getChildList when element is a reference to another element

* fixes to QuestionnaireRenderer + add QuestionnaireResponseRenderer

* Add more informative error when no type parser provided

* fix bug where current/dev builds do not properly update the cache

* improve test error message

* set up release notes
2020-06-30 20:25:38 -04:00
markiantorno 7f7e83f6f8 Updating version to: 5.0.10-SNAPSHOT 2020-06-27 00:25:51 +00:00
markiantorno 4ca25bdb52 Release: v5.0.9
* Two significant bug fixes for the validator (thanks Mark Burnett from Babylon Health for finding them):
  * The validator was not enforcing type restrictions when some profiles restricted elements with choices to a single type
  * The validator was only creating warnings not errors for required bindings on some Quantities
  * + Fix handling of infrastructural terminology failings on Codings - treat them as warnings not errors
* Add extra validation for value sets (check concept codes are valid)
* Add extra code to check derivation consisteny for SearchParameter resources
* More Improvements to Questionnaire Rendering

***NO_CI***
2020-06-27 00:17:13 +00:00
Grahame Grieve b08c12f2c4
update test case dependency to 1.1.22 (#263)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests
2020-06-26 20:07:30 -04:00
Grahame Grieve 03a4224424
fix for new test case about profiles restricting types (#261)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator
2020-06-26 14:46:54 -04:00
Grahame Grieve 93f8b1c338
Merge pull request #255 from ahdis/oe_structuremap_np
StructureMap rendering  has np when RelationShip is not set
2020-06-26 10:24:09 +10:00
Grahame Grieve e1e994704d More stability on tests + fix questionnaire renderer problem + add SearchParameter derivation validation 2020-06-25 11:24:03 +10:00
Grahame Grieve a85adcf88d enhancements to questionnaire renderer 2020-06-24 17:27:08 +10:00
Grahame Grieve 37bd445ed4 fix bug in rendering of relative references 2020-06-24 15:07:02 +10:00
Grahame Grieve 7ac714c2b6 Add resource sorters 2020-06-24 13:45:28 +10:00
Oliver Egger 4f21c40f83 set equivalence relationship in parsing 2020-06-22 12:34:00 +02:00
markiantorno 344d778a87 Updating version to: 5.0.9-SNAPSHOT
***NO_CI***
2020-06-19 22:15:34 +00:00
markiantorno 87f1c42b89 Release: v5.0.8
***NO_CI***
2020-06-19 22:06:03 +00:00
Grahame Grieve 0e8b5f6552
various fixes for reported bugs (#252)
* fix bug in Definition mode - support ofType()

* fix bug reading old packages

* fix for invalid OperationOutome if nothing is wrong

* more fix for when no errors found
2020-06-19 16:02:56 -04:00
Grahame Grieve 6a6f6e6167 Add support for removing code systems from the cache 2020-06-18 08:46:01 +10:00
Grahame Grieve 93b0d74eb5 Add GraphDefinition engine 2020-06-17 12:23:00 +10:00
Grahame Grieve faf31afda1 fix rendering issues found in main build 2020-06-17 12:22:40 +10:00
Grahame Grieve 1a4edb33a4 Fix problem with NPE rendering quantity 2020-06-14 07:08:31 +10:00
markiantorno 49c35b1de2 Updating version to: 5.0.8-SNAPSHOT
***NO_CI***
2020-06-13 13:12:37 +00:00
markiantorno b2ecaa2bfa Release: v5.0.7
* Override extension methods in BackboneElement to look in modifierExtensions as well as extensions
* First draft of Profile Comparison tools (org.hl7.fhir.r5.comparison)
* Improved error messages when snapshot generation fails when slicing something that doesn't repeat
* Improvements for CDA round-tripping (XML esacping issues, xsi:type related issues, namespacing issues)
* Fix bug rendering DiagnosticReports with multiple categories
* adjust check on Attachment to only be an warning (when no meaningful content exists)
* add security check mode to Validator
***NO_CI***
2020-06-13 12:51:27 +00:00
Mark Iantorno f5455bb9e9
Merge branch 'release' into merge_branch 2020-06-12 19:34:50 -04:00
Grahame Grieve c1a9d3d1e5 beef up tests for multiple dependencies in snapshot generation 2020-06-12 09:23:12 +10:00
Grahame Grieve c6d667db04 fix for profile comparison issues 2020-06-12 09:22:48 +10:00
Grahame Grieve 3e55b24473
Merge pull request #237 from hapifhir/gg-work
override Element extension methods to also check for modifierExtensions
2020-06-11 21:58:20 +10:00
Grahame Grieve ebbee32827
Merge pull request #238 from hapifhir/gg-work-2
fix bug with category
2020-06-11 21:57:50 +10:00
Grahame Grieve 5f1d6e193c first release of functional Profile comparison on new framework 2020-06-11 16:40:57 +10:00
Grahame Grieve a09c4c3cea fix NPE in IG publisher 2020-06-11 16:40:20 +10:00
Grahame Grieve 3b925f219d Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-11 06:24:02 +10:00
Oliver Egger ebc2a7a6ba don't escape umlaut in elem utf8 2020-06-10 19:50:52 +02:00
Grahame Grieve 8f838d164f fix bug with category 2020-06-10 22:08:04 +10:00
Grahame Grieve 5efaee2c47 add javadoc around extension mgmt 2020-06-10 12:16:54 +10:00
Grahame Grieve 0c9375aa5b fix whitespace 2020-06-10 09:47:12 +10:00
Grahame Grieve cfe386e141 clarify 2020-06-10 09:45:27 +10:00
Grahame Grieve fb9b123c65 override Element extension methods to also check for modifierExtensions 2020-06-10 09:00:51 +10:00
Grahame Grieve b01c64dc2c
Merge pull request #197 from ahdis/oliveregger_cdatitle
Deserializing CDA ST and ED elements from JSON fix
2020-06-10 08:47:13 +10:00
Grahame Grieve 4d9ace1619
Merge pull request #228 from ahdis/oliveregger_fml_xsitype
CDA xsi:type serialization when using fhir mapping language
2020-06-10 08:45:12 +10:00
Grahame Grieve 9e7ef8ab38
Merge pull request #230 from ahdis/oe_cdanarrative_npfix
CDA Narrative conversion from FHIR, Nullpointer exception fix
2020-06-10 08:43:17 +10:00
Grahame Grieve c26b331850 more work on profile comparison 2020-06-09 17:22:37 +10:00
Grahame Grieve 81ebd97599 fix bug in validator XML parser 2020-06-09 17:22:03 +10:00
Oliver Egger 31a4d31755 CDA Narrative conversion from FHIR NP fix 2020-06-08 21:51:05 +02:00
Oliver Egger 473a9aab0a roundtrip for sdtc, add ns, xml name to serialize 2020-06-08 15:48:13 +02:00
Oliver Egger d0ee44dfa8 json roundtrip cda title 2020-06-08 10:47:54 +02:00
Oliver Egger 5576a02378 add ed/st type definition and roundrip 2020-06-08 10:32:47 +02:00
Oliver Egger 22ec0924da logical model not as resource (create xsi:type) 2020-06-08 10:01:09 +02:00
Grahame Grieve 94467b270a standardise terminology client across versions 2020-06-07 08:42:14 +10:00
Mark Iantorno 0fb57007c4
Release v5.0.6 (#226)
* reenable test and fix recursion

* remove disabled r4 fml tests

* add conformsTo test and support for FML

* Snapshot builder fix (#223)

* Update module-snapshot-publishing.yml for Azure Pipelines

* Changing pipeline, because intermodule depenedecies are not being read in correctly.

* Update README.md

* Fixed bad link

* Release: v5.0.6

***NO_CI***

* Updating version to: 5.0.7-SNAPSHOT
***NO_CI***

* Fixing issues and preparing for release (#225)

* Issue #189 - improve Questionnaire error message

* fix for issue #187

* more work on comparison

* Fix for NamingSystem display

Co-authored-by: Oliver Egger <oliver.egger@ahdis.ch>
Co-authored-by: Grahame Grieve <grahameg@gmail.com>
2020-06-05 18:47:17 -04:00
Grahame Grieve 0c718c7a9b Fix for NamingSystem display 2020-06-06 07:28:58 +10:00
Grahame Grieve b2367e94b6 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-06 07:24:00 +10:00
Grahame Grieve 60119b5f64 more work on comparison 2020-06-06 07:23:43 +10:00
Grahame Grieve eaab390aa4
Merge pull request #218 from ahdis/oliveregger_fml_conformsto
FHIR Mapping Language support for conformsTo function
2020-06-06 07:00:23 +10:00
Mark Iantorno 97b6a9fbdb
Snapshot builder fix (#223)
* Update module-snapshot-publishing.yml for Azure Pipelines

* Changing pipeline, because intermodule depenedecies are not being read in correctly.
2020-06-05 13:23:52 -04:00
Oliver Egger e6e4515777 add conformsTo test and support for FML 2020-06-05 17:56:14 +02:00
Oliver Egger 72d250a40a Merge remote-tracking branch 'upstream/master' 2020-06-05 17:55:01 +02:00
markiantorno 7975a65474 wip 2020-06-05 11:05:52 -04:00
Grahame Grieve 3c296b3ff7 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-05 05:36:14 +10:00
markiantorno 9c3d678f6e changing package cache manager to the new version used in r4 so builds pass. reverting changes to fork number in maven 2020-06-04 09:57:34 -04:00
Oliver Egger bc4f99bed8 Merge remote-tracking branch 'upstream/master' 2020-06-04 10:29:48 +02:00
Grahame Grieve fcc18a0e39
Merge pull request #214 from hapifhir/ja_20200524_npm_rework
Refactor package support to remove filesystem dependency
2020-06-04 16:04:02 +10:00
Grahame Grieve f90d456ddc Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-04 10:37:37 +10:00
Grahame Grieve 83157e689f Improve rendering of content reference in profiles 2020-06-04 10:37:18 +10:00
markiantorno 7a63c0b353 wip 2020-06-03 13:33:12 -04:00
markiantorno 38e2afbf25 Packaging all SNAPSHOTS at once, instead of iterating through individual pom files 2020-06-03 11:19:57 -04:00
markiantorno a74b604ca3 wip 2020-06-03 10:21:06 -04:00
Oliver Egger 429774afb9 Merge remote-tracking branch 'upstream/master' 2020-06-03 14:48:53 +02:00
Grahame Grieve 861a0ee706 change error to warning for extension frrom different version because context might change between versions 2020-06-03 16:03:14 +10:00
Grahame Grieve 14505af3b5 Fix NPE validating from unknown code system when the code is in extension 2020-06-03 09:32:52 +10:00
jamesagnew 6534a5358b Merge branch 'master' into ja_20200524_npm_rework 2020-06-02 18:02:51 -04:00
Grahame Grieve 7ac1b1f0e0 implement new FHIRPath functions 2020-06-03 06:52:47 +10:00
Grahame Grieve 08b59b89e2 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-06-03 05:06:45 +10:00
Grahame Grieve 8658047c16 FHIRPath functions 2020-06-03 05:06:25 +10:00
markiantorno b8a4f6ae4f putting back in check for WINDOWS os for sdc test case. I know this isn't ideal, but this will get the tests back to a passing state, and we canmake changes with the CI running 2020-06-02 11:25:59 -04:00
Grahame Grieve f169a4315f start working on R3 string functions 2020-06-02 18:21:27 +10:00
Grahame Grieve 211ac8fc12 fix bug processing profiles for v1.4.0 2020-06-02 18:21:09 +10:00
Grahame Grieve f1d901a842 Support for rendering contained resources in IG Publisher 2020-06-02 13:52:28 +10:00
Grahame Grieve c5634c012e Questionnaire Rendering improvements 2020-06-02 13:51:41 +10:00
Grahame Grieve a0245ca926 Release new version 5.0.6 2020-06-01 17:40:06 +10:00
Grahame Grieve a99c2cee96 Fix bad path in QuestionnaireRenderer 2020-06-01 16:53:02 +10:00
Grahame Grieve adf7daff51 fix bad path in snapshot generation tests 2020-06-01 16:52:47 +10:00
Grahame Grieve ba505a800e Add toBase64 & fromBase64 to FHIRPath 2020-06-01 16:51:49 +10:00
jamesagnew 17411a3659 Merge branch 'master' into ja_20200524_npm_rework 2020-05-30 12:07:17 -04:00
Grahame Grieve 05ac3ebc98 Release new version 5.0.5 2020-05-30 09:55:30 +10:00
Grahame Grieve b4fc944afc fix up CDA tests, and add support for http://hl7.org/fhir/StructureDefinition/elementdefinition-xml-name for CDA 2020-05-30 09:39:53 +10:00
Grahame Grieve 4af4925657 move turtle parser + tests to Utilities 2020-05-30 09:38:48 +10:00
Grahame Grieve 112b09d00d fix bug rendering by profile 2020-05-29 17:44:36 +10:00
Grahame Grieve c4185492a5 fix bug rendering content references in profiles 2020-05-29 15:06:45 +10:00
Grahame Grieve dab9a7d4cd fix up sdc test 2020-05-29 12:47:30 +10:00
markiantorno a8176a841d Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into junit_test_issues 2020-05-28 14:16:19 -04:00
markiantorno 5c7e713997 Adding conditional execution for new Narrative test, removing test suite, as we don't use those anymore, they are from JUnit 4 and cause the vintage engine to kick in, which double runs some tests. 2020-05-28 13:47:10 -04:00
Grahame Grieve 0f0d19cd94 Add checks for illegal constratins on elements 2020-05-28 22:55:35 +10:00
Grahame Grieve f64d5c7fd5 fix problem with rendering confusion between paths around local and base specifications 2020-05-28 14:08:30 +10:00
Grahame Grieve c7258dc7eb fix bug constraining elements once they are sliced 2020-05-28 14:07:26 +10:00
Grahame Grieve 998d1e0afc Release new version 5.0.4 2020-05-27 11:06:30 +10:00
Grahame Grieve ccb6b067b3 Release new version 5.0.3 2020-05-26 06:15:36 +10:00
jamesagnew 444b612805 Start reworking NPM manager 2020-05-24 15:02:37 -04:00
Grahame Grieve b828169317 Fix for Core issue #95 - recursion on profile definition 2020-05-24 08:17:19 +10:00
Grahame Grieve ad82386a9c More questionnaire rendering improvements 2020-05-23 08:16:03 +10:00
Grahame Grieve 3f4d574571 Update Liquid Implementation 2020-05-23 08:15:37 +10:00
Grahame Grieve 50ea83322f Release new version 5.0.2 2020-05-22 08:58:45 +10:00
Grahame Grieve 786aa001c5 fix misleading error message + uppate for new release of tests 2020-05-22 08:17:36 +10:00
Grahame Grieve 130caef348 Add support for Attachment validation + max size and max decimal places validation 2020-05-21 13:22:21 +10:00
Grahame Grieve 5f1889765d add debugging hook for convenience 2020-05-21 13:20:58 +10:00
Grahame Grieve 028d1a6ce9 enhance API for external use 2020-05-20 21:43:39 +10:00
Grahame Grieve 4e6c8ba232 Fix bug not handling slicing/sparse differentials correctly (both snapshot and rendering) 2020-05-20 18:52:11 +10:00
Grahame Grieve f02c9f0e09 Add questionnaire + NamingSystem rendering and fix various bugs in renderers from further testing 2020-05-20 18:50:08 +10:00
Grahame Grieve e496907985 fix compile 2020-05-19 05:43:50 +10:00
Grahame Grieve 13e99bac29 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-05-19 05:40:07 +10:00
Grahame Grieve c7444745de Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-05-19 05:38:46 +10:00
Grahame Grieve 80d9102aee Add questionnaire renderer 2020-05-19 05:38:24 +10:00
Oliver Egger 5aad454764 reenable test and fix recursion 2020-05-18 14:34:02 +02:00
Grahame Grieve 31db4b7666 refactor rendering code 2020-05-18 20:30:05 +10:00
Grahame Grieve e4292f6830 fix rendering of exclusions 2020-05-18 06:18:49 +10:00
Grahame Grieve 38849214fc prevent NPE in slicing rendering 2020-05-18 06:18:28 +10:00
jamesagnew 2e5d9ff77c Version bump to 5.0.1 2020-05-12 19:27:30 -04:00
jamesagnew 60502b3c77 Prepare for 5.0.0 release 2020-05-12 11:33:54 -04:00
Grahame Grieve 463a557402 Release new version 4.2.30 2020-05-12 11:54:28 +10:00
Grahame Grieve edea997312 Clean up license 2020-05-12 08:55:27 +10:00
jamesagnew 14f803ea42 Just cleaning up imports 2020-05-11 13:24:23 -04:00
jamesagnew 56b0acf73f A bit of datatype cleanup 2020-05-11 09:01:31 -04:00
jamesagnew 7c81ebce56 Two model fixes 2020-05-11 08:05:36 -04:00
Grahame Grieve daa58aea8f Release new version 4.2.29 2020-05-11 17:25:24 +10:00
Grahame Grieve b43497897b upgrade to v4.4.0, with attendant fixes 2020-05-11 17:09:14 +10:00
Grahame Grieve 5f74bea327 move tests & do new release 2020-05-10 09:18:54 +10:00
Grahame Grieve d203b17c7d update to use new secondary package server 2020-05-10 08:15:40 +10:00
Grahame Grieve 2af8d94081 new release 2020-05-08 12:00:51 +10:00
Grahame Grieve eb9de04d2d Start building conformance resource comparison code 2020-05-08 11:58:02 +10:00
Grahame Grieve 48d9c21748 fix to compile 2020-05-06 12:17:08 +10:00
Grahame Grieve c5c0a8db92 Release new version 4.2.26 2020-05-06 11:16:19 +10:00
Grahame Grieve 17ef340972 Release new version 4.2.25 2020-05-06 11:16:01 +10:00
Grahame Grieve 37d4994c8f start building the renderer package 2020-05-05 11:50:23 +10:00
Grahame Grieve 868fbb5f95 Release new version 4.2.25 2020-05-02 10:53:58 +10:00
Grahame Grieve af6df3e798 improve rendering of concept maps with multiple targets 2020-05-02 07:57:30 +10:00
Grahame Grieve b214e99930 Release new version 4.2.24 2020-05-02 06:57:31 +10:00
Grahame Grieve d5bb555151 fix for issue #188 + fix for transition of ConceptMap enumeration 2020-05-02 06:56:29 +10:00
Rob Hausam 3a6d03fb7e ConceptMap updates for 'source-is-narrower-than-target' (formerly 'broader') and 'source-is-broader-than-target' (formerly 'narrower') relationships 2020-04-30 22:54:47 -05:00
Grahame Grieve f8ca02d697 Release new version 4.2.23 2020-05-01 11:15:25 +10:00
Grahame Grieve c003f1fca4 Add provenance support for version conversion. + add Provenance rendering 2020-05-01 11:14:29 +10:00
Grahame Grieve bc21de6d78 fix broken test 2020-04-30 14:58:30 +10:00
markiantorno 89f98bb960 I cast you out unclean spirit. 2020-04-29 16:55:40 -04:00
markiantorno 1086a46a6c wip 2020-04-29 14:55:47 -04:00
markiantorno 5893249747 fixing tests 2020-04-29 14:40:46 -04:00
markiantorno 368a45a150 Fix for HAPI-FHIR issue 1820 2020-04-29 14:08:36 -04:00
Grahame Grieve 6110b56396 Release new version 4.2.22 2020-04-29 20:37:31 +10:00
Grahame Grieve d63e05b3cb Fix problem evaluating "type" discriminators ending with .resolve() + fix NPE in FHIRPath parser 2020-04-29 20:34:18 +10:00
Grahame Grieve 608149e494 Release new version 4.2.21 2020-04-29 14:57:18 +10:00
Grahame Grieve 01a5420a68 Generate Narrative correctly for ContactDetails 2020-04-29 14:49:08 +10:00
Grahame Grieve 6f3362918d Release new version 4.2.20 2020-04-28 13:27:23 +10:00
Grahame Grieve f9bdd5c9f0 fix handling of unknown code systems 2020-04-28 10:14:23 +10:00
Grahame Grieve fdbcbacd1c fix bug in tests 2020-04-27 14:27:25 +10:00
Grahame Grieve 7e3051535d fix error in caching 2020-04-27 14:27:07 +10:00
Grahame Grieve 3d2214d9eb fix definition title for UTG 2020-04-26 15:13:43 +10:00
Grahame Grieve c829de2f86
Merge branch 'master' into testing_updates 2020-04-24 07:20:35 +10:00
markiantorno 0ef4b01e90 disabled test that wasn't supposed to run yet 2020-04-23 14:51:57 -04:00
markiantorno 7673400a13 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into testing_updates 2020-04-23 10:51:49 -04:00
markiantorno 9c83540c2f Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui 2020-04-23 10:47:00 -04:00
Grahame Grieve 602e684bc6 Release new version 4.2.19 2020-04-23 21:07:04 +10:00
Grahame Grieve 01e0afd72a get mutli-languages displaying for code systems 2020-04-23 20:57:39 +10:00
Grahame Grieve 4316c81f7e reorganize generation code for terminology resources 2020-04-23 17:31:58 +10:00
Grahame Grieve 8d3a0cf18e fix problem with abstract codes not appearing in value set expansions 2020-04-23 17:29:59 +10:00
Grahame Grieve ce67dabfeb fix problem expanding flat code systems part #2 + fix misleading error message for URI value set validation 2020-04-22 16:45:17 +10:00
Grahame Grieve 4cbf328e54 support validation against code system fragments 2020-04-22 16:43:32 +10:00
markiantorno 4e81bb5edb Test suites are a thing of the past. 2020-04-21 20:36:40 -04:00
markiantorno a7e874501e Tests updated to JUnit Jupiter. Various quality of life improvements. 2020-04-21 20:36:17 -04:00
Grahame Grieve 175d5fa0b7 Release new version 4.2.18 2020-04-21 13:58:17 +10:00
Grahame Grieve 957a71dc41 better debugging of error strings 2020-04-21 13:57:41 +10:00
Grahame Grieve e76c65e6c9 Fix problem expanding flat code systems 2020-04-21 10:00:30 +10:00
Grahame Grieve 8a9bcbf6e6 reorganise to test cross-version extensions 2020-04-17 22:27:02 +10:00
Grahame Grieve ec517834b0 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-04-17 10:58:54 +10:00
Grahame Grieve 4d30314a3d Improve URL validation + fix NPE in Measure validation 2020-04-17 10:58:06 +10:00
Grahame Grieve 549abaa799 more informative error message for package failure 2020-04-17 10:56:20 +10:00
Grahame Grieve b4a9765aa0
Merge pull request #172 from hapifhir/base64_fix
Fix for NPEs in Base64BinaryType. Added tests to cover the cases.
2020-04-17 10:54:18 +10:00
Grahame Grieve 82d80caec5 Allow expansions on code system fragments, with warnings when appropriate 2020-04-17 10:46:09 +10:00
markiantorno d3733b3409 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui 2020-04-16 20:28:25 -04:00
markiantorno 8c3e03399e wip 2020-04-16 10:17:33 -04:00
Rob Hausam 118fe3d7e3 Restore expansion version notice capability for multiple versions of same code system. 2020-04-15 02:24:36 -05:00
markiantorno 55622f53cb Fix for NPEs in Base64BinaryType. Added tests to cover the cases. Updated for all FHIR versions. 2020-04-14 22:28:32 -04:00
Grahame Grieve 979bad6af1 Add support for R5 version extensions and using cross version extensions when generating narrative 2020-04-12 22:04:57 +10:00
Grahame Grieve 4bd0d60e5c Release new version 4.2.17 2020-04-12 08:25:18 +10:00
Grahame Grieve fa9c1cae1d bug fixes for list narrative generation 2020-04-12 08:22:29 +10:00
Grahame Grieve d97e408d3c Release new version 4.2.16 2020-04-11 20:50:39 +10:00
Grahame Grieve 8431a12195 Pass too-costly note on when including value sets + Improve rendering of value set version dependencies 2020-04-11 19:28:12 +10:00
Grahame Grieve 6e3af326de minor fixes for getting tests passing 2020-04-09 11:33:41 +10:00
Grahame Grieve 01de20c310 Release new version 4.2.15 2020-04-09 10:50:54 +10:00
Grahame Grieve a261ad0f75 improve error message for randon text in xml format 2020-04-09 10:28:08 +10:00
Grahame Grieve f1594bc133 beef up the Context interface to support package related tracking, and use that to manage UTG resource contention 2020-04-09 10:26:39 +10:00
Grahame Grieve 35074ca0b2 fix bug in ConceptMap rendering for unmapped codes 2020-04-07 14:49:55 +10:00