d9d0f22ff3
cache CapabilityStatement and TerminologyCapabilities
2022-01-18 16:09:59 -05:00
5313706a9a
fix compile problems
2022-01-14 06:24:46 +11:00
554a458b57
fix up logging problem
2022-01-13 17:38:39 +11:00
32bbcf14b6
Merge remote-tracking branch 'origin/master' into tx-server-cache-analysis
2022-01-06 11:43:10 -05:00
36cc6defc2
Refactor with a mock + new test to catch exception
2022-01-06 10:10:45 -05:00
2d4bbe3749
Clean code
2022-01-04 13:57:39 -05:00
7ee5d0c5e4
Merge remote-tracking branch 'origin/master' into tx-server-cache-analysis
2022-01-04 13:23:32 -05:00
b785940a2b
refactor: inline method
2021-12-22 12:58:35 -05:00
c80b7eae10
refactor: add display name to test
2021-12-22 11:54:19 -05:00
9171c39d59
refactor: extract private helper methods
2021-12-22 11:53:24 -05:00
f941329fcc
bug: check temporary variable hasn't been set yet
2021-12-22 11:50:43 -05:00
369744488d
test: check that coding is translated
2021-12-22 11:50:05 -05:00
137592ecbf
test: check that coding is translated
2021-12-22 11:47:23 -05:00
e4d3047138
#357 : fix bug looking for contained resources inside bundles
2021-12-17 14:38:21 +11:00
3118cdc132
Add support for new FHIR Versions
2021-12-17 12:08:40 +11:00
80382865de
Merge branch 'master' into tx-server-cache-analysis
2021-12-15 16:49:39 -05:00
c15e60f2c6
main Build fixes: new version of FHIR (4.3.0) + transit to using release indicators in version + fix various build issues
2021-12-15 07:28:19 +11:00
1c1e7d22ca
WIP track server requests
2021-12-07 16:08:28 -05:00
444c8951c6
removing jetbrains annotations
2021-12-06 12:54:40 -05:00
4d0692ff61
Validate contains ( #669 )
...
* wip
* first go at this, still some failing tests
* post-pairing with Grahame
* wip
* failing test cases
* fixed InstanceValidator to respect new validation options for both references and contained resources
* removed dead code
* put copyright back in BaseValidator
* wip
2021-11-25 15:52:29 -05:00
dbf8179b6d
Merge pull request #663 from hapifhir/gg-202111-cs-work
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Gg 202111 cs work
2021-11-18 11:43:37 +11:00
bbac44fc52
reduce spurious logging
2021-11-18 08:09:43 +11:00
cccf1cebae
Update maven config and tests to allow Java 8, 11 and 17 builds ( #653 )
...
* Updates to enable Java 8, 11, and 17 builds
* Set surefire args according to profile + update jacoco verison
* Add comments for surefire profile args.
* Temporarily skip failing test
* Object based parameters ***NO_CI***
* Cleanup skipped test, move new pipeline codo
* Update validator_test_case_version
2021-11-16 09:26:53 -05:00
5a33d5c15a
merge conflicts + rework rendering + gather all HTTP access to SimpleHTTPClient + add TerminologyCacheManager
2021-11-09 16:24:21 +11:00
1aae6c8c76
rework HTTP client - all client calls route through SimpleHTTPClient + define CommonPackages infrastructure
2021-11-09 11:38:25 +11:00
7bcd2b6434
Adding changes for logging request and resp
2021-11-08 16:10:04 -05:00
d91b26e69b
Add getServerVersion to tooling client
2021-11-09 06:13:18 +11:00
c8c96e13fd
Merge pull request #615 from lschmierer/graphql_fixes
...
Fix GraphQLSchemaGenerator to produce valid GraphQL schemas
2021-11-03 11:26:45 +11:00
1c65a9b261
Gg 202110 validation various ( #634 )
...
* add explicit control over the User-Agent header, and make sure headers flow through properly to all calls
* #328 - wrong processing of markdown URLs
* test fixes for URL handling
* fix tests
* improved validation of UUIDs
* fix test case dependency
* Add Dicom Package builder
2021-10-29 16:26:50 -04:00
237897965b
Gg 202110 misc validation ( #617 )
...
* NPE fixes
* Smart Health Cards support in validator
* Fix bug generating spreadsheets due to sheet name length limitations
* Implement descendent-of filter
* more NPE fixes
* add Element.removeChild
* fix issue generation snapshot and content reference, and work around old erroneous binding description in R4
* improve SHC validation error
* fix for NPE generating ConceptMap spreadsheet
* fix crash in IG publisher rendering illegal content
* Improve slicing error messages
* more improving error message resolving slicing
* add missing code + track prohibited / required elements (improve rendering of IGs)
* fix for broken links in R4B IGs
* fix bug related to logger in FHIRToolingClient
* fix bug related to logger in context
* enable detection of whether tx server knows about value set and better track returned errors from tx server
* make likely source URL visible outside ProfileUtilities
* fix renderers - don't make nonvalid URLs into html links + fix NPE +
* fix bug with sheetnames generating spreadsheets
* supper branches in current version of packages
* report slicing information automatically where slicing is based on profile + fix shc support + support codesystem-properties-mode + fix value set validation on profiles + fix wrong entry point on vaildating contained resources with profiles
* fix misleading validation message + add -ips parameter for validator
* hint not warning when it's an example questionnaire
2021-10-10 17:37:02 -04:00
6bf58e678e
change import comment to be compatible with graphql-tools
2021-10-04 16:06:07 +02:00
04a72c6e29
use ElementBaseInput instead of ElementBase for input types
2021-10-04 16:03:17 +02:00
98a99ec630
fix duplicate scalar "date"
2021-10-04 13:21:29 +02:00
d67f7c9926
print correct type in json format comment
2021-10-04 13:11:55 +02:00
6981e75765
fix parameter scalars to be lowercase
2021-10-04 12:11:36 +02:00
3b6a2c91cf
update ListResource profile in r4 ( #612 )
2021-09-29 12:38:13 -04:00
72b7300700
Adding blank case for ExpressionNode.toString() in r4 and r5. ( #609 )
2021-09-27 14:52:55 -04:00
ad18e131d8
Issue 602 ( #607 )
...
* r5 changes
* r4 changes
* dstu3 changes
* dstu2 changes
* updating release notes
2021-09-27 14:04:59 -04:00
e5a05f5562
Terminology client headers ( #599 )
...
* wip
* adding tests for headers in client
* fix
* r4 updated httpclient
* updating http client code for r4 and dstu3
* dunno why this didn't get added before
2021-09-09 16:32:19 -04:00
b5723bab50
Merge branch 'master' into issue-555
2021-08-24 06:00:27 +10:00
66b9e180e6
Improved performance of hashNWS ( #570 ) ( #573 )
...
Co-authored-by: Jonathan Meijer <jonathan.meijer@telus.com>
2021-08-11 15:44:20 -04:00
a9abd8f824
https://github.com/hapifhir/org.hl7.fhir.core/issues/557 ( #571 )
2021-08-11 10:07:43 -04:00
0a3cc93c2f
fix : #555 Handling minValue/maxValue in generate snapshot process
2021-08-11 10:08:45 +02:00
c6f392b7e0
#466 : fix problem checking types on logical models
2021-05-05 09:54:22 +10:00
9ae04aed03
Fix compartment definitions of ListResource.source and subject for R3 and R4
2021-05-05 08:51:36 +10:00
898665f356
fixes for #483 : Quantity subclasses copy() functions not all transferring values
2021-05-04 12:43:07 +10:00
30be8a0dc1
Merge branch 'master' into issue_438
2021-03-29 09:08:04 +10:00
5187fdd398
fix issues related to R4B generation
2021-03-12 06:28:56 +11:00
a3e003740a
fixing crlf to lf
2021-02-17 14:13:37 -08:00
cc03acb3c3
Junit test for Copy method
2021-02-17 11:32:18 -08:00
c8fa589baa
Added the copying of "extension" fiels
2021-02-16 17:27:53 -08:00
8fac290ebe
#426 - fix serialization of NULL enumerations
2021-02-08 09:33:36 +11:00
c95b07f0f1
#426 - fix serialization of NULL enumerations
2021-02-08 09:32:06 +11:00
b9664caec0
fix error message suppression on tooling client
2020-12-03 12:46:43 +11:00
eb1c67c1cb
Account for review comments
2020-10-19 14:56:54 -04:00
1922f549bb
Improve multithreaded performance of datetime types
2020-10-19 14:56:54 -04:00
0cb038ed0a
performance: improve speed of comparing UriTypes
2020-10-07 19:36:03 +02:00
77d33e8afa
Fix comment parsing and add focus to FHIRPath function extensions
2020-10-01 11:04:34 +10:00
46d1987cd0
refactor FHIRPath to report error locations for run time errors
2020-09-30 12:10:59 +10:00
5be73ff9c5
rename org.hl7.fhir.utilities.cache to org.hl7.fhir.utilities.npm
2020-09-30 09:24:26 +10:00
510344aa1b
Fix FHIRPath engine for updated tests for date addition/subtraction
2020-09-30 09:22:16 +10:00
dcf3f5f218
Upping UCUM dependency, fixing old junit dependencies
2020-08-26 17:26:39 -04:00
6322aef891
Fix bug in parser around nulls in arrays
2020-08-12 04:03:41 +10:00
4add0f3ac8
Continue to work on connection timeout issues
2020-08-07 11:26:44 +10:00
3e33c8a835
ongoing work around connection problems with tx.fhir.org
2020-08-06 22:33:54 +10:00
572016e40a
fix compile
2020-08-06 07:53:18 +10:00
3f6207bf4f
improve handling of timeout issues in client
2020-08-06 07:35:49 +10:00
4f21c40f83
set equivalence relationship in parsing
2020-06-22 12:34:00 +02:00
8d59817d26
json parse r4
2020-06-08 10:47:55 +02:00
94467b270a
standardise terminology client across versions
2020-06-07 08:42:14 +10:00
ae4c3bbe0c
remove disabled r4 fml tests
2020-06-05 17:56:14 +02:00
17411a3659
Merge branch 'master' into ja_20200524_npm_rework
2020-05-30 12:07:17 -04:00
4af4925657
move turtle parser + tests to Utilities
2020-05-30 09:38:48 +10:00
444b612805
Start reworking NPM manager
2020-05-24 15:02:37 -04:00
463a557402
Release new version 4.2.30
2020-05-12 11:54:28 +10:00
edea997312
Clean up license
2020-05-12 08:55:27 +10:00
1f5663bfdf
update R4 code (issue #70 )
2020-05-12 08:42:55 +10:00
89f98bb960
I cast you out unclean spirit.
2020-04-29 16:55:40 -04:00
368a45a150
Fix for HAPI-FHIR issue 1820
2020-04-29 14:08:36 -04:00
c829de2f86
Merge branch 'master' into testing_updates
2020-04-24 07:20:35 +10:00
9c83540c2f
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui
2020-04-23 10:47:00 -04:00
a7e874501e
Tests updated to JUnit Jupiter. Various quality of life improvements.
2020-04-21 20:36:17 -04:00
5c06cfcfb8
removed hardcoded path
2020-04-17 14:34:52 -04:00
0b92c7efe5
removed hardcoded path
2020-04-17 14:16:54 -04:00
55622f53cb
Fix for NPEs in Base64BinaryType. Added tests to cover the cases. Updated for all FHIR versions.
2020-04-14 22:28:32 -04:00
53ef98198f
fix for issue #148 - UuidType is not annotated
2020-04-09 10:56:14 +10:00
d2dc15e2c8
throw Error when a value is assigned to NamingSystem.url
2020-04-07 14:49:27 +10:00
3edfeda13a
Release new version 4.2.14
2020-04-06 10:20:49 +10:00
1da57be1c0
support comments in json source when configured to do so
2020-04-02 11:00:42 +11:00
314380be77
Remove erroneous r5 model import statements from r4 NarrativeGenerator.
2020-03-30 09:47:58 -05:00
2defba63ec
Fix incorrect appending of <br/> tag causing it to be escaped.
2020-03-29 16:42:07 -05:00
afb0453e7b
Merge pull request #160 from rhausam/multiple-expansion-version-notice
...
Support listing multiple "Expansion based on" versions.
2020-03-29 16:53:11 +11:00
49a6c9d746
Support listing multiple "Expansion based on" versions.
2020-03-28 20:37:56 -05:00
5d9f1d734a
Full disclosure: this isn't really a 'bug' per say, it's more of a best practice thing. The only reason I'm making this change is because I'm working on a parser in my spare time that will most likely never see the light of day, and these accessors are causing me problems because both the line and column fields are private and need to be accessed through the appropriate accessor.
2020-03-28 16:48:37 -04:00
239331ef76
improve parsing error message when parsing json
2020-03-28 06:09:37 +11:00
f732c7bf0c
ICD11 Generator support
2020-03-20 05:15:24 +11:00
851d1fc228
fix for 1.4.0 problems
2020-03-17 11:13:50 +11:00
c46d4dd779
fix bugs around XML version + add ICD-11 generator
2020-03-17 11:10:50 +11:00
60474cd8c9
moved all Locale/Message handling Code to utils: I18nBase
2020-03-13 18:53:16 +01:00
109b80ed6f
start movin i18n code Contexts -> utilities
2020-03-13 09:53:59 +01:00
86711ac16f
readding all the i18n work
2020-03-12 23:26:05 +01:00
109dea9a02
Use ValidationOptions instead of TerminologyServiceOptions
2020-03-02 06:18:00 -05:00
137506f37f
set id when parsing StructureMap
2020-03-02 09:04:16 +11:00
d535bbaacb
Use packages.fhir.org
2020-02-18 14:31:09 +11:00
490aef6f9b
fixed Meta.getSecurity(String,String) bug
2020-02-12 20:39:37 -05:00
8c7eab4066
Merge pull request #126 from lmckenzi/igpub-validation-fixes
...
Keep new IGPublisher stuff from raising errors when down-converted to…
2020-01-22 06:30:16 +11:00
01c34f6dd3
Keep new IGPublisher stuff from raising errors when down-converted to R4. Also changed Spreadsheet extension so it doesn't raise errors when used.
2020-01-20 18:41:06 -07:00
b1802ac30e
serialize item() func as [] and not .[]
2020-01-11 00:10:08 +01:00
0ad3882132
FML updates for tests and validator
2020-01-11 00:10:07 +01:00
8b25da3443
re-org validator tests
2019-12-30 10:25:59 +11:00
0fbbd1ff02
re-org R5 source core preparatory to regenerating
2019-12-22 08:05:58 +11:00
6e0df466f7
fix SimpleDateFormat to not be locale dependent
2019-12-19 22:39:46 +11:00
097ce2cfcd
require id/active flag for all generated tables
2019-12-16 07:26:24 +11:00
6993f763d8
move Mimic14Importers to different repo
2019-12-16 07:25:06 +11:00
415193a792
Start working on active tables, fix testing bug
2019-12-14 07:54:48 +11:00
ea7f3a7957
refactor validation options, and improve codeableConcept validation, and improve code system rendering
2019-12-12 10:33:22 +11:00
9c7673c473
fhirpath indexOf support for R4
2019-12-04 15:06:20 +01:00
60703efdd4
updates for packages changes
2019-11-26 18:56:52 +11:00
df2a378eb0
update Mimic importers
2019-11-15 08:16:12 +11:00
1c4cceaf3c
update reference version dates
2019-11-14 23:22:26 +11:00
23b26c0930
update stated version to 4.0.1
2019-11-14 14:53:35 +11:00
3de429ae6a
Release new version
2019-11-13 07:49:12 +11:00
9ffdf6e81c
batchloader improvements for Mimic upload
2019-11-10 21:04:55 +11:00
7a9bdd0cfc
Release new version
2019-11-09 08:07:56 +11:00
0fcb97aa2f
validation documentation improvements, and batch loading
2019-11-09 07:54:16 +11:00
02791ae21f
update MIMIC code and reverse testing change (maven said no)
2019-11-07 20:57:16 +11:00
7099f904f5
more work on cache management
2019-11-07 12:04:24 +11:00
52187af17a
Fix for R3 and R4 technical corrections and getting IGs publishing and passing (and fix version markers)
2019-11-01 11:21:06 +11:00
888356999e
Update to support new packages, new NPM specification
2019-10-31 21:54:10 +11:00
f60bb8a9c6
updates to enumerations for technical correction releases
2019-10-31 21:52:56 +11:00
55c379dab8
improve error message when parsing json that is not a resource
2019-10-31 21:51:26 +11:00
cc496623a6
fix rendering of profiles in choice rows
2019-10-29 12:31:58 +11:00
efd20a22fe
move test cases to fhir-test-cases repository
2019-10-28 18:06:41 +11:00
08eb187b79
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2019-10-28 10:06:02 +11:00
34cf0628d1
Fix https://github.com/jamesagnew/hapi-fhir/issues/1549 - Account for
...
latest HAPI FHIR API interfaces
2019-10-27 17:44:22 -04:00
958791d1cd
more Mimic work
2019-10-25 08:19:59 +11:00
cccce9e9f0
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2019-10-23 14:48:14 +11:00
044b08b8ea
add Mimic Importer
2019-10-23 14:47:11 +11:00
2f380704de
Fix precision and validator issues
2019-10-18 10:47:20 -04:00
0cf2cafb62
Improve efficiency of isEmpty() methods
2019-10-13 19:39:19 -04:00
215fdae37f
Include the wrapper element when writing GraphQL responses
2019-09-06 10:29:31 -04:00
512c3932a3
Reconcile R4/R5 implementations
2019-08-23 15:38:58 +10:00
909535eea2
fix problems with skipping unknown content, and empty differentials
2019-08-18 17:47:48 +10:00
028802f6fc
update for HAPI release + add JsonParser constructor
2019-08-18 07:51:41 +10:00
55259ab8dc
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2019-08-16 07:19:21 +10:00
fb249ea098
fix for narrative rendering problem with OperationDefinition
2019-08-16 07:16:24 +10:00
ecfd55c368
Backport GraphQL support to DSTU3
2019-08-12 10:55:34 -04:00
3842dbeb99
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2019-08-09 04:41:53 +10:00
7ef320b6bb
fix ref-1 constraint (define %rootResource)
2019-08-08 21:03:27 +10:00
c1728a481d
Refactor R4 infrastructure to use the new common
...
TerminologyServiceOptions, and tweak the validation of enableWhen to
handle a few edge cases correctly.
2019-08-06 18:27:45 -04:00
dotasek
Grahame Grieve
Paul Robson
dotasek
markiantorno
Mark Iantorno
Lukas Schmierer
katiesmilecdr
jnmeijer
Louis Rolland
palanm
jamesagnew
Gerlach, Winfried
Oliver Egger
Rob Hausam
patrick-werner
Ken Stevens
Lloyd McKenzie